Carg00298 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00298
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	UPF0114 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_001 : 1644854 .. 1648529 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGATCCGTACCTTTCTCAACTCCCATTTCCTCGGACCTCAGTGGCTGGCGCCGCTGTATTGCAATCTTCTTTGATGTTTGAACCCTTACTCTCCCCTTCCATCTCCGGCTGCCACCATGCAACCATCTCCACCGTTGATTAGTGGCCCTTCCAGAACTCTAACCACCACTGTCCGACCTTCCACGATGATCATCCATGCTTACCACCAGTACCTGCAATCTTATCCAAAATTCAATAGCTTTATTGGGTATAAAACCCACCTTATCGGTTGTGGCCGTAGATTTCCTGCCTTTGCAACCGCCAGCTCAGGACCTCATGTTCCTGCTGCTTCTGCTCCTTCAATCCAATCCGATGTTGGCATGGCGTCCCGCACGTCGGTACTGGAAAAGTCGGGTATAATAGAGGAGGACCTGGAAAAGGTTGTGCATGTCTAATTTCTATATGGGTGTTAATTCAGTAGTAGCTTTGTAGTTTGACAATATATTTTTTCATGGGATTTCAGGCCATTTATCGATGCCGATTTATGGCATTTTTGGGCGTCTTTGGATCTTTGGTTGGGTCTATACTCTGTTTCATCAAGGTACGATGATTAAGTTCCAGCTCTCTAACACATAATTCTGTTGTCACAGGCCAGGATTTGCGTCTTGTTTGTGTGTGTTATGAGATCTTCATTCTATTTAGTTCAATTGCTTACTACACTTTCTTCGTTTTAAGAATACGATTCAGTTGACAAATTTGGTCTGCTTTACAAAGATATGATGGTAGCAGAGCTCCTTGAAATTCCATTGAGTGCAGTGAACTAAGGATATAGCTAACCTAGACGAATTGACATTTGCGAATATCTCTTTCCAACTGAATTGTTGACGATTGTATGCGTCCTTCCTTTCTGACTTCCATTCCCGTTGAAATAGGATCTCCACAACGAAAAACACTTGTCATTAGTTGGTTATTAGGAGCATCCCGAAAGGGTCGAAATATGACTTTCAAATTAAGTCCTGAATTAGTGGGATGAGGGAGAAAGAGACGGATAGGGTGGGAATGGATGTAGTTGAGTTGGAGTTTTTTCCTTTTAAGTCTGACAGTAGGGAGATTGCCATAGTTTAAAGTTTTTCTGTTGTGGTAATAGGTACAAATTCTGGATATGTGGTTGGGTCATGGGTGGTCATCGTTTCAATAAGTTTGACTTGTTTTGCCATACCGACGTGTTTTTAGGCTTTAATTTGTTCTGTTAGTGCTTTTAGCTGTGCCCTTCTTATTTCATCTCCTTATATTTCCTAGTACAGAGTAAGGATTGTATGAGGCCGTTATTTTAAGGTACTTTGTCTTACTACAGAAGAACTTCGTTAATAATGAATTCCAGATATGTGGTAAGTGTTGAGGATTGTTGGGAGAGTTGTCCCACATCGGCTAATTAAGGGGTTGATCATGGATTTATAAGTAAAGAGTACATCTCCATTAGTATGAGGCTTTTTGGGGAAACCAAAAACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGAAGGTCCGTGATTCCTAACGGTTAGGTGGTCAACATTTCAACTTCTTTTGCCGGACCAACATGCTTTTAAGACTTTGGTTTGTTATGTCAGTGCTTTAAACTGTGCCCTTGTTATTCCTCTTAAATTTCGTTATAACGAGTAAGGATTGTGCATGGTTAGGTGGACATCATTTCAATAAGTCTGACTTGTTTAGCTTTGCTCTTTGTATGAGGCTGTTATTTTAAGATACACTTGGTTTCACTTACAAAATTATAAATGAAAGTGTTGTTTAATAATATCGTTGAGGATAATCTTTTTCTTTTTAATGATTTAGAACTGTTGGGAATTTATGAATTGAGATTTTTTTTCAAGATTCTGTATCGTTGGGCCCTGGTTGGAGAATAAATGGTATACTTGCCTTTTAAGTTCTAGAAGATTTGTAAAAGCCCAAGCCCATTACTAGCCGATATCATCCTCTTTGGGCTTTCCCTCAAAGTTTTTAAAATGCGTTTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATACTTCGTTCTCCTTCCCAACTCATGTGGGATCTCACAAGATTGGTGTACTTGAATAACCATGAGCACCACAAGCTGATTGATGTTCCTTTAGTTTTGATTTTCATTAAATAAATGGTATCTGCTCTGCCTTTCTTGATATTCTAATTTTATACTACATGACTGAAATGCAGGGGTGTGTTCATGTAGCAGCATCGTTCTCAGAATATTTTGTAAATCGTGGAAAAGTAATAATGTTGCTGGTTGAGGCTATCGGTACTTACCGTGAATTACTCTCAAATTAATATCTTTGTCTCGATTTTCTATCGGTCGAATCTTTTTTTCAATGTTCATCATTTTGTTCTAAAAAAATATCTTTGAATCTTTGTAGAAAAGAAATTTGATCTGATGCCAAGTTTATGTTGAGAACTGTTTATCTTTGGATCTTTGAATCTTTTTTGCTTCAAATGGTATGCAGATGTGTATCTCTTAGGAACTGTGATGCTCGTCTTTGGGACGGGTCTCTATGAGCTGTTTATCAGCCATCTTGGAACTGAACGGACTTTGTCAAAGAGAAACATTGAGCATAGGTCCAATTTATTTGGCTTGTTCACTTTAAAGGTGAGTCGATCTCAACACTTCGGTCTTCGGTCTTTGAACTTTAGTATGTAATGAATTAATTCTCTTCGTTTATTTTTCATGACTTAGTCCGTGGTGAAAATTCGTATAATGAGTTCTTTTAATATAGAAACTAAATTGTAATGATTAAATTGTTACAAGATTTATATGGTAGAGAATAAATGGTTACGTACTAAAATTTAGGACTAAATTGTTATTTTAACTAAACATATGGATGAAAGGTGGTTTTTTAACATTGTATATTCACCAAAACGTGTATAGATTAGCTCATATTCGATTATGTTAAATGGTATTTTTGTAGGAACGACCAAAATGGATGAACATAACGACGGTTAACGAGCTGAAAACGAAGCTGGGGCATGTCATAGTGATGCTGCTTCTAATCGGGTTCTTCGACAAGAGTAAAAAGGCGGCTATACAATCTCCAGGTGATTTGCTTTGCTTAGCTGCTTCAGTATTCCTGTCCTCTGGTAGCCTGTTTTTGCTGTCTAAACTAACCGAATAAAACTAATAAGTTATCGAATAAAACTAATAAGTTATGTACAAATATAAAATATATAATCCCTTTTTTTTTTTGCCCTTTTGGCCCCCTCCGAAAACGCTTGAAACCATGAAATATTAGTGTTATTGTAAATGGCTGTGTAAGTTTGCTGTAAGAAGATGTTGCTGCAATGTAGAGTGACTTCAAAAGAGTAAATAAACAAGGGGATGAAGCTTTAGAAAGCCATTTCTGGGTCGTGTCGAGATTAAGAACTGTAGAATTGGCCGAACGATGGGAGTCTCGAGAGTGATGTGTTACTATATTCAATATTGGTCGAACTGAGTATAATTCAATTGATTAATATAAGATCGAGAAGAAAAGAAAAAGAACAGTTGAAAAGCCCCCAAACCTCTGTCTAAACAAAGGCTGTACACAATCACAAAAACTAGTCTTAAAAAAAAGGAACAATAATCATGTCAAACCACTAGAATATCATTGCCTTTACCCCAAACCTAG

mRNA sequence

TATGATCCGTACCTTTCTCAACTCCCATTTCCTCGGACCTCAGTGGCTGGCGCCGCTGTATTGCAATCTTCTTTGATGTTTGAACCCTTACTCTCCCCTTCCATCTCCGGCTGCCACCATGCAACCATCTCCACCGTTGATTAGTGGCCCTTCCAGAACTCTAACCACCACTGTCCGACCTTCCACGATGATCATCCATGCTTACCACCAGTACCTGCAATCTTATCCAAAATTCAATAGCTTTATTGGGTATAAAACCCACCTTATCGGTTGTGGCCGTAGATTTCCTGCCTTTGCAACCGCCAGCTCAGGACCTCATGTTCCTGCTGCTTCTGCTCCTTCAATCCAATCCGATGTTGGCATGGCGTCCCGCACGTCGGTACTGGAAAAGTCGGGTATAATAGAGGAGGACCTGGAAAAGGCCATTTATCGATGCCGATTTATGGCATTTTTGGGCGTCTTTGGATCTTTGGTTGGGTCTATACTCTGTTTCATCAAGGGGTGTGTTCATGTAGCAGCATCGTTCTCAGAATATTTTGTAAATCGTGGAAAAGTAATAATGTTGCTGGTTGAGGCTATCGATGTGTATCTCTTAGGAACTGTGATGCTCGTCTTTGGGACGGGTCTCTATGAGCTGTTTATCAGCCATCTTGGAACTGAACGGACTTTGTCAAAGAGAAACATTGAGCATAGGTCCAATTTATTTGGCTTGTTCACTTTAAAGGAACGACCAAAATGGATGAACATAACGACGGTTAACGAGCTGAAAACGAAGCTGGGGCATGTCATAGTGATGCTGCTTCTAATCGGGTTCTTCGACAAGAGTAAAAAGGCGGCTATACAATCTCCAGGTGATTTGCTTTGCTTAGCTGCTTCAGTATTCCTGTCCTCTGGTAGCCTGTTTTTGCTGTCTAAACTAACCGAATAAAACTAATAAGTTATCGAATAAAACTAATAAGTTATGTACAAATATAAAATATATAATCCCTTTTTTTTTTTGCCCTTTTGGCCCCCTCCGAAAACGCTTGAAACCATGAAATATTAGTGTTATTGTAAATGGCTGTGTAAGTTTGCTGTAAGAAGATGTTGCTGCAATGTAGAGTGACTTCAAAAGAGTAAATAAACAAGGGGATGAAGCTTTAGAAAGCCATTTCTGGGTCGTGTCGAGATTAAGAACTGTAGAATTGGCCGAACGATGGGAGTCTCGAGAGTGATGTGTTACTATATTCAATATTGGTCGAACTGAGTATAATTCAATTGATTAATATAAGATCGAGAAGAAAAGAAAAAGAACAGTTGAAAAGCCCCCAAACCTCTGTCTAAACAAAGGCTGTACACAATCACAAAAACTAGTCTTAAAAAAAAGGAACAATAATCATGTCAAACCACTAGAATATCATTGCCTTTACCCCAAACCTAG

Coding sequence (CDS)

ATGCAACCATCTCCACCGTTGATTAGTGGCCCTTCCAGAACTCTAACCACCACTGTCCGACCTTCCACGATGATCATCCATGCTTACCACCAGTACCTGCAATCTTATCCAAAATTCAATAGCTTTATTGGGTATAAAACCCACCTTATCGGTTGTGGCCGTAGATTTCCTGCCTTTGCAACCGCCAGCTCAGGACCTCATGTTCCTGCTGCTTCTGCTCCTTCAATCCAATCCGATGTTGGCATGGCGTCCCGCACGTCGGTACTGGAAAAGTCGGGTATAATAGAGGAGGACCTGGAAAAGGCCATTTATCGATGCCGATTTATGGCATTTTTGGGCGTCTTTGGATCTTTGGTTGGGTCTATACTCTGTTTCATCAAGGGGTGTGTTCATGTAGCAGCATCGTTCTCAGAATATTTTGTAAATCGTGGAAAAGTAATAATGTTGCTGGTTGAGGCTATCGATGTGTATCTCTTAGGAACTGTGATGCTCGTCTTTGGGACGGGTCTCTATGAGCTGTTTATCAGCCATCTTGGAACTGAACGGACTTTGTCAAAGAGAAACATTGAGCATAGGTCCAATTTATTTGGCTTGTTCACTTTAAAGGAACGACCAAAATGGATGAACATAACGACGGTTAACGAGCTGAAAACGAAGCTGGGGCATGTCATAGTGATGCTGCTTCTAATCGGGTTCTTCGACAAGAGTAAAAAGGCGGCTATACAATCTCCAGGTGATTTGCTTTGCTTAGCTGCTTCAGTATTCCTGTCCTCTGGTAGCCTGTTTTTGCTGTCTAAACTAACCGAATAA

Protein sequence

MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFATASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVGSILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGTERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAAIQSPGDLLCLAASVFLSSGSLFLLSKLTE

Homology

[Close]

BLAST of Carg00298 vs. NCBI nr
Match: XP_022940220.1 (uncharacterized protein LOC111445906 [Cucurbita moschata])

HSP 1 Score: 520.4 bits (1339), Expect = 3.7e-144
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA 60
           MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA
Sbjct: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA 60

Query: 61  TASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVG 120
           TASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVG
Sbjct: 61  TASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVG 120

Query: 121 SILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGT 180
           SILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGT
Sbjct: 121 SILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGT 180

Query: 181 ERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAA 240
           ERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAA
Sbjct: 181 ERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAA 240

Query: 241 IQSPGDLLCLAASVFLSSGSLFLLSKLTE 270
           IQSPGDLLCLAASVFLSSGSLFLLSKLTE
Sbjct: 241 IQSPGDLLCLAASVFLSSGSLFLLSKLTE 269

[Close]

BLAST of Carg00298 vs. NCBI nr
Match: XP_023523344.1 (uncharacterized protein LOC111787566 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 514.6 bits (1324), Expect = 2.0e-142
Identity = 267/269 (99.26%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA 60
           MQPSPPLISGPSRTLTTTV PSTMII AYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA
Sbjct: 1   MQPSPPLISGPSRTLTTTVGPSTMIIQAYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA 60

Query: 61  TASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVG 120
           TASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVG
Sbjct: 61  TASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVG 120

Query: 121 SILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGT 180
           SILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGT
Sbjct: 121 SILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGT 180

Query: 181 ERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAA 240
           ERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAA
Sbjct: 181 ERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAA 240

Query: 241 IQSPGDLLCLAASVFLSSGSLFLLSKLTE 270
           IQSPGDLLCLAASVFLSSGSLFLLSKLTE
Sbjct: 241 IQSPGDLLCLAASVFLSSGSLFLLSKLTE 269

[Close]

BLAST of Carg00298 vs. NCBI nr
Match: XP_022981673.1 (uncharacterized protein LOC111480745 [Cucurbita maxima])

HSP 1 Score: 513.8 bits (1322), Expect = 3.4e-142
Identity = 265/269 (98.51%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA 60
           MQPSPPLISGPSR+LTTTVRPSTMII AYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA
Sbjct: 1   MQPSPPLISGPSRSLTTTVRPSTMIIQAYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA 60

Query: 61  TASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVG 120
           TASSGPHVPAASAPSIQSD+GMASRTS LEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVG
Sbjct: 61  TASSGPHVPAASAPSIQSDIGMASRTSALEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVG 120

Query: 121 SILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGT 180
           SILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGT
Sbjct: 121 SILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGT 180

Query: 181 ERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAA 240
           ERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAA
Sbjct: 181 ERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAA 240

Query: 241 IQSPGDLLCLAASVFLSSGSLFLLSKLTE 270
           IQSPGDLLCLAASVFLSSGSLFLLSKLTE
Sbjct: 241 IQSPGDLLCLAASVFLSSGSLFLLSKLTE 269

[Close]

BLAST of Carg00298 vs. NCBI nr
Match: XP_022140712.1 (uncharacterized protein LOC111011276 [Momordica charantia])

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 221/270 (81.85%), Postives = 236/270 (87.41%), Query Frame = 0


Query: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLI-GCGRRFPAF 60
           MQPSPPLI+GP RTLTTTVRPST+I+ AYH Y QS PKF+ F GY T L+ GC RRFPA 
Sbjct: 1   MQPSPPLITGPIRTLTTTVRPSTIIVQAYH-YQQSNPKFSRFFGYTTDLVGGCSRRFPAC 60

Query: 61  ATASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLV 120
           A+ SSGP VPAASAP IQSD   A RTS LEK   IEE LEKAIYRCRFMAFLGV GSL+
Sbjct: 61  ASTSSGPQVPAASAPLIQSDFSAAPRTSALEKLETIEEGLEKAIYRCRFMAFLGVLGSLI 120

Query: 121 GSILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLG 180
           GS+LCF+KGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLG
Sbjct: 121 GSVLCFVKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLG 180

Query: 181 TERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKA 240
           T ++ S +N EHRSNLFGLFTLKERPKW+ I TVNELKTKLGHVIVMLLLIGFF+K+KK 
Sbjct: 181 TAQSPSMKNAEHRSNLFGLFTLKERPKWLYIKTVNELKTKLGHVIVMLLLIGFFEKTKKV 240

Query: 241 AIQSPGDLLCLAASVFLSSGSLFLLSKLTE 270
            IQSPGDLLCLA SVFLSSGSLFLLSKLTE
Sbjct: 241 VIQSPGDLLCLAVSVFLSSGSLFLLSKLTE 269

[Close]

BLAST of Carg00298 vs. NCBI nr
Match: XP_022937012.1 (uncharacterized protein LOC111443436 [Cucurbita moschata])

HSP 1 Score: 416.4 bits (1069), Expect = 7.4e-113
Identity = 218/270 (80.74%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLI-GCGRRFPAF 60
           MQPSP LI+GP RTLTTT RPST+II AY Q+ Q  PKFN   GY+  L+ GCGRRFPA 
Sbjct: 1   MQPSPSLITGPIRTLTTTARPSTIIIQAY-QHQQPNPKFNGIFGYRADLVGGCGRRFPAC 60

Query: 61  ATASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLV 120
           A+ SSGP VPAASAP +QSDVG ASRTS LEK   +EE LEKAIYRCRFMAFLGV GSL+
Sbjct: 61  ASPSSGPQVPAASAPFVQSDVGAASRTSALEKLDTVEEGLEKAIYRCRFMAFLGVLGSLI 120

Query: 121 GSILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLG 180
           GS+LCF+KGCVHVAAS SEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFIS+LG
Sbjct: 121 GSVLCFVKGCVHVAASLSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISNLG 180

Query: 181 TERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKA 240
           + R+ S+R++ HRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKK 
Sbjct: 181 SARSFSERSVLHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKV 240

Query: 241 AIQSPGDLLCLAASVFLSSGSLFLLSKLTE 270
            IQSPGDLLCLA S+FLSS +LFLLSKLTE
Sbjct: 241 VIQSPGDLLCLAVSIFLSSATLFLLSKLTE 269

[Close]

BLAST of Carg00298 vs. TAIR10
Match: AT4G19390.1 (Uncharacterised protein family (UPF0114))

HSP 1 Score: 231.9 bits (590), Expect = 4.7e-61
Identity = 116/173 (67.05%), Postives = 141/173 (81.50%), Query Frame = 0


Query: 95  IEEDLEKAIYRCRFMAFLGVFGSLVGSILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAI 154
           +EE +EK IY CRFM FLG  GSL+GS+LCFIKGC++V  SF +Y VNRGKVI LLVEAI
Sbjct: 97  LEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQYSVNRGKVIFLLVEAI 156

Query: 155 DVYLLGTVMLVFGTGLYELFISHLGTERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVN 214
           D+YLLGTVMLVFG GLYELFIS+L T  + +   + +RS+LFG+FTLKERP+W+ + +V+
Sbjct: 157 DIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFTLKERPQWLEVKSVS 216

Query: 215 ELKTKLGHVIVMLLLIGFFDKSKKAAIQSPGDLLCLAASVFLSSGSLFLLSKL 268
           ELKTKLGHVIVMLLLIG FDKSK+  I S  DLLC++ S+F SS  LFLLS+L
Sbjct: 217 ELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSIFFSSACLFLLSRL 269

[Close]

BLAST of Carg00298 vs. TAIR10
Match: AT5G13720.1 (Uncharacterised protein family (UPF0114))

HSP 1 Score: 164.5 bits (415), Expect = 9.2e-41
Identity = 86/178 (48.31%), Postives = 121/178 (67.98%), Query Frame = 0


Query: 96  EEDLEKAIYRCRFMAFLGVFGSLVGSILCFIKGCVHVAASFSEYFVN------RGKVIML 155
           E ++E+ I+  RF+A L V GSL GS+LCF+ GCV++  ++  Y+ N       G++++ 
Sbjct: 80  ESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKGIHTGQMVLR 139

Query: 156 LVEAIDVYLLGTVMLVFGTGLYELFISHLGTERTLSKRNIEHRSNLFGLFTLKERPKWMN 215
           LVEAIDVYL GTVML+F  GLY LFISH   +           S+LFG+F +KERPKWM 
Sbjct: 140 LVEAIDVYLAGTVMLIFSMGLYGLFISHSPHDVPPESDRALRSSSLFGMFAMKERPKWMK 199

Query: 216 ITTVNELKTKLGHVIVMLLLIGFFDKSKKAAIQSPGDLLCLAASVFLSSGSLFLLSKL 268
           I++++ELKTK+GHVIVM+LL+  F++SK   I +  DLL  +  +FLSS SL++L  L
Sbjct: 200 ISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNL 257

[Close]

BLAST of Carg00298 vs. TrEMBL
Match: tr|A0A1S3BA03|A0A1S3BA03_CUCME (uncharacterized protein LOC103487632 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487632 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.7e-111
Identity = 217/270 (80.37%), Postives = 234/270 (86.67%), Query Frame = 0


Query: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIG-CGRRFPAF 60
           MQPSP LI+GP RT TTTVRPST+II AY QY Q  PKFNS  GY+T L+G C R FPA 
Sbjct: 1   MQPSPSLITGPIRTRTTTVRPSTIIIQAY-QYQQPNPKFNSLFGYRTDLVGACSRSFPAC 60

Query: 61  ATASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLV 120
           A+ S GP VPAASAP IQ+ +G ASRTS LEK   IEE+LEKAIYRCRFMAFLGV GSL+
Sbjct: 61  ASRSPGPQVPAASAPLIQTHLGAASRTSTLEKMNTIEEELEKAIYRCRFMAFLGVLGSLI 120

Query: 121 GSILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLG 180
           GSILCFIKGCVHVAASFSEYFVNRGKVIM+LVEAIDVYLLGTVMLVFGTGLYELFIS LG
Sbjct: 121 GSILCFIKGCVHVAASFSEYFVNRGKVIMVLVEAIDVYLLGTVMLVFGTGLYELFISQLG 180

Query: 181 TERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKA 240
             R+LSK N+EH+SNLFGLF LKERPKWMN+ TVNELKTKLGHVIVMLLLIGFFDKSKK 
Sbjct: 181 NARSLSKSNVEHKSNLFGLFPLKERPKWMNVRTVNELKTKLGHVIVMLLLIGFFDKSKKV 240

Query: 241 AIQSPGDLLCLAASVFLSSGSLFLLSKLTE 270
            IQSP DLLCLA S+FLSSG+LFLL+KLTE
Sbjct: 241 VIQSPVDLLCLAVSIFLSSGTLFLLTKLTE 269

[Close]

BLAST of Carg00298 vs. TrEMBL
Match: tr|A0A0A0KWU8|A0A0A0KWU8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G242880 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 4.9e-105
Identity = 206/270 (76.30%), Postives = 227/270 (84.07%), Query Frame = 0


Query: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIGCG-RRFPAF 60
           MQPSP LI+ P R LTTT+RPST+I  AYH Y Q  PKFNS  GY+ HL+G   R FPA 
Sbjct: 1   MQPSPSLITCPIRILTTTLRPSTIIFQAYH-YHQPIPKFNSLFGYRPHLLGSSTRSFPAS 60

Query: 61  ATASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLV 120
           A+ +    VPAASAP IQ+ +G ASRTS LEK   +EE+LEKAIYRCRFMAF GV GSL+
Sbjct: 61  ASHTPESQVPAASAPLIQTHLGAASRTSTLEKMNTVEEELEKAIYRCRFMAFFGVLGSLI 120

Query: 121 GSILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLG 180
           GSI CFI+GCVHVAASFSEYFVNRGKVI++LVEAIDVYLLGTVMLVFGTGLYELFIS LG
Sbjct: 121 GSIHCFIEGCVHVAASFSEYFVNRGKVIIVLVEAIDVYLLGTVMLVFGTGLYELFISQLG 180

Query: 181 TERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKA 240
             R LSK N+EH+SNLFGLF LKERPKWMN+ TVNELKTKLGHVIVMLLLIGFFDKSKK 
Sbjct: 181 NARPLSKSNVEHKSNLFGLFPLKERPKWMNVRTVNELKTKLGHVIVMLLLIGFFDKSKKV 240

Query: 241 AIQSPGDLLCLAASVFLSSGSLFLLSKLTE 270
            IQSPGDLLCLA S+FLSSG+LFLL+KLTE
Sbjct: 241 VIQSPGDLLCLAVSIFLSSGTLFLLTKLTE 269

[Close]

BLAST of Carg00298 vs. TrEMBL
Match: tr|A0A1S3BAP6|A0A1S3BAP6_CUCME (uncharacterized protein LOC103487632 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487632 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.9e-78
Identity = 160/205 (78.05%), Postives = 173/205 (84.39%), Query Frame = 0


Query: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIG-CGRRFPAF 60
           MQPSP LI+GP RT TTTVRPST+II AY QY Q  PKFNS  GY+T L+G C R FPA 
Sbjct: 1   MQPSPSLITGPIRTRTTTVRPSTIIIQAY-QYQQPNPKFNSLFGYRTDLVGACSRSFPAC 60

Query: 61  ATASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLV 120
           A+ S GP VPAASAP IQ+ +G ASRTS LEK   IEE+LEKAIYRCRFMAFLGV GSL+
Sbjct: 61  ASRSPGPQVPAASAPLIQTHLGAASRTSTLEKMNTIEEELEKAIYRCRFMAFLGVLGSLI 120

Query: 121 GSILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLG 180
           GSILCFIKGCVHVAASFSEYFVNRGKVIM+LVEAIDVYLLGTVMLVFGTGLYELFIS LG
Sbjct: 121 GSILCFIKGCVHVAASFSEYFVNRGKVIMVLVEAIDVYLLGTVMLVFGTGLYELFISQLG 180

Query: 181 TERTLSKRNIEHRSNLFGLFTLKER 205
             R+LSK N+EH+SNLFGLF LK R
Sbjct: 181 NARSLSKSNVEHKSNLFGLFPLKSR 204

[Close]

BLAST of Carg00298 vs. TrEMBL
Match: tr|A0A2I4E5P2|A0A2I4E5P2_9ROSI (uncharacterized protein LOC108986526 OS=Juglans regia OX=51240 GN=LOC108986526 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-71
Identity = 164/271 (60.52%), Postives = 191/271 (70.48%), Query Frame = 0


Query: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA 60
           M+PS P  + P RT  T   P+  +      +  +  +F+ F            RF    
Sbjct: 1   MRPSSPYTAKPVRTPPT---PTPSVFTQNFTFNLTVKRFSVFRPRNA-------RFAVTM 60

Query: 61  TASSGPHVPAASAPSIQSDVGMASR--TSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSL 120
           T SSG     +S+P I+SD+G  S    +   K   IEE +E+AIYRCRFM  LGV GSL
Sbjct: 61  TTSSG----HSSSPVIESDIGSHSSMFRNTPGKVEAIEEGIERAIYRCRFMTLLGVLGSL 120

Query: 121 VGSILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHL 180
           VGSILCFIKGC HV +S+ EY VNRGKVIMLLVEAIDVYLLGTVMLVFG GLYELF+S+L
Sbjct: 121 VGSILCFIKGCTHVLSSYLEYSVNRGKVIMLLVEAIDVYLLGTVMLVFGMGLYELFVSNL 180

Query: 181 GTERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKK 240
            T ++  K  + ++SNLFGLFTLKERPKW+NI TVNELKTKLGHVIVMLLLIG FDKSKK
Sbjct: 181 DTAKSRLKEKLPYQSNLFGLFTLKERPKWLNIKTVNELKTKLGHVIVMLLLIGLFDKSKK 240

Query: 241 AAIQSPGDLLCLAASVFLSSGSLFLLSKLTE 270
           A IQSP DLLC +ASV LSSGSLFLLSKLT+
Sbjct: 241 AVIQSPVDLLCFSASVLLSSGSLFLLSKLTD 257

[Close]

BLAST of Carg00298 vs. TrEMBL
Match: tr|A0A2P4GQU7|A0A2P4GQU7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_56730 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 155/267 (58.05%), Postives = 180/267 (67.42%), Query Frame = 0


Query: 1   MQPSPPLISGPSRTLTTTVRPSTMIIHAYHQYLQSYPKFNSFIGYKTHLIGCGRRFPAFA 60
           M+PSP  +  P             II     +    PKF S +  K  +           
Sbjct: 1   MKPSPLFLPKP-----------ITIIRTQPLFFAQTPKFTSNV--KPTIFQSSPHRIRLC 60

Query: 61  TASSGPHVPAASAPSIQSDVGMASRTSVLEKSGIIEEDLEKAIYRCRFMAFLGVFGSLVG 120
           + S       +S+P I+SDV  +        S   EE +EKAIY CRFM FLGV GSLVG
Sbjct: 61  SVSMSTRSVHSSSPVIESDVQRSDSYPSFVNS--TEEHIEKAIYGCRFMTFLGVLGSLVG 120

Query: 121 SILCFIKGCVHVAASFSEYFVNRGKVIMLLVEAIDVYLLGTVMLVFGTGLYELFISHLGT 180
           S LCFIKGC HV +SF EYFVNRGKVI+LLV+AIDVYLLGTVMLVFG GLYELF+S+L +
Sbjct: 121 SFLCFIKGCTHVVSSFMEYFVNRGKVILLLVQAIDVYLLGTVMLVFGMGLYELFVSNLDS 180

Query: 181 ERTLSKRNIEHRSNLFGLFTLKERPKWMNITTVNELKTKLGHVIVMLLLIGFFDKSKKAA 240
            ++LS+    +RSNLFGLFTLKERPKW++I TVNELKTKLGHVIVM+LLIG FDKSKKA 
Sbjct: 181 SKSLSEEKTPYRSNLFGLFTLKERPKWLDIKTVNELKTKLGHVIVMILLIGLFDKSKKAV 240

Query: 241 IQSPGDLLCLAASVFLSSGSLFLLSKL 268
           I SP DLLC +ASV LSSGSLFLLSKL
Sbjct: 241 IHSPFDLLCFSASVLLSSGSLFLLSKL 252

The following BLAST results are available for this feature:

BLAST of Carg00298 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940220.1	3.7e-144	100.00	uncharacterized protein LOC111445906 [Cucurbita moschata]	[more]
XP_023523344.1	2.0e-142	99.26	uncharacterized protein LOC111787566 [Cucurbita pepo subsp. pepo]	[more]
XP_022981673.1	3.4e-142	98.51	uncharacterized protein LOC111480745 [Cucurbita maxima]	[more]
XP_022140712.1	1.5e-113	81.85	uncharacterized protein LOC111011276 [Momordica charantia]	[more]
XP_022937012.1	7.4e-113	80.74	uncharacterized protein LOC111443436 [Cucurbita moschata]	[more]

BLAST of Carg00298 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19390.1	4.7e-61	67.05	Uncharacterised protein family (UPF0114)	[more]
AT5G13720.1	9.2e-41	48.31	Uncharacterised protein family (UPF0114)	[more]

BLAST of Carg00298 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg00298 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BA03\|A0A1S3BA03_CUCME	2.7e-111	80.37	uncharacterized protein LOC103487632 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KWU8\|A0A0A0KWU8_CUCSA	4.9e-105	76.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G242880 PE=4 SV=1	[more]
tr\|A0A1S3BAP6\|A0A1S3BAP6_CUCME	3.9e-78	78.05	uncharacterized protein LOC103487632 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2I4E5P2\|A0A2I4E5P2_9ROSI	2.1e-71	60.52	uncharacterized protein LOC108986526 OS=Juglans regia OX=51240 GN=LOC108986526 P...	[more]
tr\|A0A2P4GQU7\|A0A2P4GQU7_QUESU	1.1e-67	58.05	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_56730 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005134	UPF0114

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00298-RA	Carg00298-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005134	Uncharacterised protein family UPF0114	PFAM	PF03350	UPF0114	coord: 103..235 e-value: 1.2E-37 score: 128.6
None	No IPR available	PANTHER	PTHR31721	FAMILY NOT NAMED	coord: 53..268
None	No IPR available	PANTHER	PTHR31721:SF4	SUBFAMILY NOT NAMED	coord: 53..268

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00298	Cla023205	Watermelon (97103) v1	carwmB0672
Carg00298	Csa4G242880	Cucumber (Chinese Long) v2	carcuB0690
Carg00298	MELO3C010532	Melon (DHL92) v3.5.1	carmeB0673
Carg00298	ClCG11G016160	Watermelon (Charleston Gray)	carwcgB0647
Carg00298	CSPI04G12190	Wild cucumber (PI 183967)	carcpiB0702
Carg00298	CmaCh09G007570	Cucurbita maxima (Rimu)	carcmaB0932
Carg00298	CmaCh01G013520	Cucurbita maxima (Rimu)	carcmaB0947
Carg00298	CmoCh09G007480	Cucurbita moschata (Rifu)	carcmoB0906
Carg00298	CmoCh01G014060	Cucurbita moschata (Rifu)	carcmoB0922
Carg00298	Lsi04G018520	Bottle gourd (USVL1VR-Ls)	carlsiB612
Carg00298	Cp4.1LG06g05900	Cucurbita pepo (Zucchini)	carcpeB0947
Carg00298	Cp4.1LG02g02880	Cucurbita pepo (Zucchini)	carcpeB0943
Carg00298	CsGy4G011320	Cucumber (Gy14) v2	carcgybB0665
Carg00298	MELO3C010532.2	Melon (DHL92) v3.6.1	carmedB0685
Carg00298	CsaV3_4G014830	Cucumber (Chinese Long) v3	carcucB0703
Carg00298	Cla97C11G222110	Watermelon (97103) v2	carwmbB0692
Carg00298	Bhi09G002291	Wax gourd	carwgoB0789

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00298	Carg20072	Silver-seed gourd	carcarB574

The following block(s) are covering this gene:

None