Carg00143 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00143
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Aspartate-semialdehyde dehydrogenase
Location	Cucurbita_argyrosperma_scaffold_001 : 743972 .. 745892 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCTCAAGAGTGATGCTAATGTTAAAGTTACTGCCACTTGCATACGAGTTCCTGTCATGCGTGCGCATGCTGAGAGTGTGAATCTTCAATTTGAGAATCCCCTTGATGAGGTAAGATTTTATTTTGATATTGTTTTGATCAGTGCTATCGTGTATTCTTCTTGAGATATTTGTTGATTGCTGGCATATAGATTTTCAGTTTTCCTCTGCTTATTTTAGGTTGAGAATGAAATGATTTTGAAGTGCCTTTTCCCAGACTTTTGTATGGGGAATGGAAATCCACCCTAGTTGTTAAAATATCATGTCAGGATCCAAGGGGTATGCCTTGAGGGTAATGGCTTGGGATGCTCGGAGATAACCTCGAAGGTCTTGGATTTAAGCCCCTAAGTTGAAAACTTTATAATTTGGCCTTGGGGTGGTTGAGGCCTCCTCAAAGATTAGTGGATGGGCTATAAGCATAATGTAAAGAGTGAACTTGTTTTTCTTAATTTTAACTTTTCTTTTGAATGAGGACATTTCCGCCTGTCTTTTGCTTTTGTAATGCACAAAAGAATGGTGCTGAATCTAAGAGAATGTGCTTTCAACTTTTGAGGCCATGTGGTGAAGCCTTTTACAGCCTATTTGGACTTCTGTCAATCGGCCTCCTAATATATTGTCATGGTACATTTGCGTTCCATAGGTTTGATTTTACTAGGAGATGCTTGATTGAATGTTTCTTCATAATGCTCTAAGAACTTCTTTGATTGAGCACATTGTAAAATTCGCTGTATAAGATCTTCTTTGATTGATTACTATATAATGGATGCCAATTGTTAGTTTCTTTAGAATGGTCCTGAACAATTACTCATCCATTATTTCCCATTTTTTCCTTCTTGTAGGAAATAAGTACTCATGGATTGTTCTCGTTTCTTTCTTTTTATAGGAAGCTAAAAATTCATAAATTCCCCAAAACTGAATTATAGAGCATTACATTATTTAGCAAATAAAACCTACCACCGTGTTGCGGTTATGTTCATGGCGAAGTTCTTAAAATCTGATATTTGCGGTTCTCTTTTCATTTGAATTTGTTTTCTCGTTATGGGTTCTCTAAACACACACTCGCAGTTGAATTTGAGATCATCATCAGTCCAGGATGAAATGTATCTGATGCTTGAAATTTTCCATCTGATTCATGTTTGTGTCACATTACTAAAAATGTTTTGACTTCATTTATCAATAGATCACCTCATACCTCTCTCGGTAGATTAATTCTTCTATGTCGAAGTTGTAATTGCATTAGTAAAATCTGTAACCATTTGATATGTTTGTGATCAATGATTCTAGTCGCAAAAATATAGTTCCACGAATCGAGTTCTAAGTTATTATTTCTGTTTTATGCAGGACACAGCCAGAGAGATTCTGAAAAACGCTCCTGGAGTCGTCATTATAGACGACCGGGCTGCCAACCAGTTTCCTACACCATTGAAAGTATCAAACAAAGATAACGTCGCTGTTGGAAGGATTCGACAGGATGTTTCACTTGATGGAAATAAAGGGTATAAACATCTACCTCGTAGAGTTATCTGTTTGTTTCCTGATTGAAAAATGAAAACAAAACTAATGGGATTCTCATGGATGCAGGTTGGATATCTTCGTCTGTGGTGATCAAATTCGCAAGGGTGCAGCGCTTAATGCTGTTCAGATCGCCGAGTTGTTACTGTAGTCCCGACGATGACCGAAAATTGGTACATTGCTAGACAAAGTTCTTGTTGCTACATATGATATCACAGAATGTCTCTCAAGGTAAAAAAAAAATCATCTCTCGGTCTTTGTATCCATAACTTGGAGCAAATTTTGCAGGACGGTCAATTAAGATTATGAGTTTGCATTTAGATCTCTGGTTTGAAGGAAAAATTTGGAATTGATGTTAAGTTATTTT

mRNA sequence

ATGCCCCTCAAGAGTGATGCTAATGTTAAAGTTACTGCCACTTGCATACGAGTTCCTGTCATGCGTGCGCATGCTGAGAGTGTGAATCTTCAATTTGAGAATCCCCTTGATGAGGACACAGCCAGAGAGATTCTGAAAAACGCTCCTGGAGTCGTCATTATAGACGACCGGGCTGCCAACCAGTTTCCTACACCATTGAAAGTATCAAACAAAGATAACGTCGCTGTTGGAAGGATTCGACAGGATGTTTCACTTGATGGAAATAAAGGGTTGGATATCTTCGTCTGTGGTGATCAAATTCGCAAGGGTGCAGCGCTTAATGCTGTTCAGATCGCCGAGTTGTTACTGTAGTCCCGACGATGACCGAAAATTGGTACATTGCTAGACAAAGTTCTTGTTGCTACATATGATATCACAGAATGTCTCTCAAGTCAATTAAGATTATGAGTTTGCATTTAGATCTCTGGTTTGAAGGAAAAATTTGGAATTGATGTTAAGTTATTTT

Coding sequence (CDS)

ATGCCCCTCAAGAGTGATGCTAATGTTAAAGTTACTGCCACTTGCATACGAGTTCCTGTCATGCGTGCGCATGCTGAGAGTGTGAATCTTCAATTTGAGAATCCCCTTGATGAGGACACAGCCAGAGAGATTCTGAAAAACGCTCCTGGAGTCGTCATTATAGACGACCGGGCTGCCAACCAGTTTCCTACACCATTGAAAGTATCAAACAAAGATAACGTCGCTGTTGGAAGGATTCGACAGGATGTTTCACTTGATGGAAATAAAGGGTTGGATATCTTCGTCTGTGGTGATCAAATTCGCAAGGGTGCAGCGCTTAATGCTGTTCAGATCGCCGAGTTGTTACTGTAG

Protein sequence

MPLKSDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPTPLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL

Homology

[Close]

BLAST of Carg00143 vs. NCBI nr
Match: XP_022941546.1 (uncharacterized protein LOC111446872 [Cucurbita moschata])

HSP 1 Score: 219.5 bits (558), Expect = 5.8e-54
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT
Sbjct: 263 SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 322

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           PLKVSNKD+VAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL
Sbjct: 323 PLKVSNKDDVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 374

[Close]

BLAST of Carg00143 vs. NCBI nr
Match: XP_022991287.1 (uncharacterized protein LOC111487985 [Cucurbita maxima])

HSP 1 Score: 219.5 bits (558), Expect = 5.8e-54
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT
Sbjct: 263 SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 322

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           PLKVSNKD+VAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL
Sbjct: 323 PLKVSNKDDVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 374

[Close]

BLAST of Carg00143 vs. NCBI nr
Match: XP_023524013.1 (uncharacterized protein LOC111788078 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.5 bits (558), Expect = 5.8e-54
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT
Sbjct: 263 SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 322

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           PLKVSNKD+VAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL
Sbjct: 323 PLKVSNKDDVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 374

[Close]

BLAST of Carg00143 vs. NCBI nr
Match: XP_023517959.1 (uncharacterized protein LOC111781535 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.1 bits (549), Expect = 6.4e-53
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           SDANVKVTATCIRVPVMRAHAESVNLQFENPLDED AREILKNAPGVVIIDDRAANQFPT
Sbjct: 263 SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDAAREILKNAPGVVIIDDRAANQFPT 322

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           PLKVSNKD+VAVGRIRQD+SLDGNKGLDIF+CGDQIRKGAALNAVQIAE+LL
Sbjct: 323 PLKVSNKDDVAVGRIRQDISLDGNKGLDIFICGDQIRKGAALNAVQIAEMLL 374

[Close]

BLAST of Carg00143 vs. NCBI nr
Match: XP_022995976.1 (uncharacterized protein LOC111491326 [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 1.4e-52
Identity = 106/112 (94.64%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           SDANVKVTATCIRVPVMRAHAESVNLQFENPLDED A+EILKNAPGVVIIDDRAANQFPT
Sbjct: 263 SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDAAKEILKNAPGVVIIDDRAANQFPT 322

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           PLKVSNKD+VAVGRIRQD+SLDGNKGLDIF+CGDQIRKGAALNAVQIAE+LL
Sbjct: 323 PLKVSNKDDVAVGRIRQDISLDGNKGLDIFICGDQIRKGAALNAVQIAEMLL 374

[Close]

BLAST of Carg00143 vs. TAIR10
Match: AT1G14810.1 (semialdehyde dehydrogenase family protein)

HSP 1 Score: 194.9 bits (494), Expect = 2.8e-50
Identity = 98/112 (87.50%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           +D  VKVTATCIRVPVMRAHAESVNLQFENPLDE+TAREILK APGV IIDDRA+N FPT
Sbjct: 264 NDTEVKVTATCIRVPVMRAHAESVNLQFENPLDENTAREILKKAPGVYIIDDRASNTFPT 323

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           PL VSNKD+VAVGRIR+DVS DGN GLDIFVCGDQIRKGAALNAVQIAE+LL
Sbjct: 324 PLDVSNKDDVAVGRIRRDVSQDGNFGLDIFVCGDQIRKGAALNAVQIAEMLL 375

[Close]

BLAST of Carg00143 vs. Swiss-Prot
Match: sp|P49420|DHAS_PROMA (Aspartate-semialdehyde dehydrogenase OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=asd PE=3 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 6.1e-31
Identity = 62/112 (55.36%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           + + + +TATC+RVPV+RAH+ES+N++F  P   + AR+IL NA G+ +++D   N+FP 
Sbjct: 231 NQSELAITATCVRVPVLRAHSESINIEFAEPFPVEEARKILSNASGIKLLEDIQMNRFPM 290

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           P+ V+ KD++AVGRIRQD+S    K L++++CGDQIRKGAALNA+QIAELLL
Sbjct: 291 PIDVTGKDDIAVGRIRQDLS--NPKALELWLCGDQIRKGAALNAIQIAELLL 340

[Close]

BLAST of Carg00143 vs. Swiss-Prot
Match: sp|Q55512|DHAS_SYNY3 (Aspartate-semialdehyde dehydrogenase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=asd PE=3 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 5.7e-29
Identity = 60/109 (55.05%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 8   NVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPTPLK 67
           ++++TATC+RVPV+RAH+E+VNL+F  P   + A+  +  APGV +++D   N FP P+ 
Sbjct: 227 DIRITATCVRVPVLRAHSEAVNLEFATPFPVELAKTAIAKAPGVKLVEDWQKNYFPMPMD 286

Query: 68  VSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
            + +D+V VGRIRQD+S     GLD+++CGDQIRKGAALNAVQIAELL+
Sbjct: 287 ATGQDDVLVGRIRQDIS--HPNGLDLWLCGDQIRKGAALNAVQIAELLV 333

[Close]

BLAST of Carg00143 vs. Swiss-Prot
Match: sp|O67716|DHAS_AQUAE (Aspartate-semialdehyde dehydrogenase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=asd PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-26
Identity = 56/111 (50.45%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 6   DANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPTP 65
           D N+KV+ATC+R+PV   H+ES++++ E  +  + ARE+LKNAPGV++ID+   N++P P
Sbjct: 227 DENIKVSATCVRIPVFYGHSESISMETEKEISPEEAREVLKNAPGVIVIDNPQNNEYPMP 286

Query: 66  LKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           +    +D V VGRIR+D   +   GL ++V  D IRKGAA NAVQIAELL+
Sbjct: 287 IMAEGRDEVFVGRIRKDRVFE--PGLSMWVVADNIRKGAATNAVQIAELLV 335

[Close]

BLAST of Carg00143 vs. Swiss-Prot
Match: sp|Q59291|DHAS_CAMJE (Aspartate-semialdehyde dehydrogenase OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) OX=192222 GN=asd PE=3 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-21
Identity = 51/106 (48.11%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 8   NVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPTPLK 67
           N++V+ATC+RVPV+R+H+E++ + FE  +D   A+EILK AP V++IDD    ++P PL 
Sbjct: 232 NLEVSATCVRVPVLRSHSEAITMHFEKEIDVKKAKEILKKAPSVIVIDDPKNKKYPMPLM 291

Query: 68  VSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAE 114
            S+ +   VGRIR DV     K L ++   DQIR GAA NAV+IA+
Sbjct: 292 TSDTNETYVGRIRADVY--DKKILHLWCVADQIRVGAATNAVRIAQ 335

[Close]

BLAST of Carg00143 vs. Swiss-Prot
Match: sp|Q9ZK28|DHAS_HELPJ (Aspartate-semialdehyde dehydrogenase OS=Helicobacter pylori (strain J99 / ATCC 700824) OX=85963 GN=asd PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-21
Identity = 51/102 (50.00%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 11  VTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPTPLKVSN 70
           ++ATC+RVPV+R+H+ES+++ FE   D     E+LKNAP VV+ DD + N +PTPLK S+
Sbjct: 240 ISATCVRVPVLRSHSESLSIAFEKEFDLKEVYEVLKNAPSVVVCDDPSHNLYPTPLKASH 299

Query: 71  KDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIA 113
            D+V +GR+R+D  L   K L  F   DQ+R GAA NA++IA
Sbjct: 300 TDSVFIGRLRKD--LFDKKTLHGFCVADQLRVGAATNALKIA 339

[Close]

BLAST of Carg00143 vs. TrEMBL
Match: tr|A0A0A0KIR3|A0A0A0KIR3_CUCSA (Aspartate-semialdehyde dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G021870 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 106/112 (94.64%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           SDANVKVTATCIRVPVMRAHAES+NLQFENPLDE+TAREILKNAPGVVIIDDR ANQFPT
Sbjct: 265 SDANVKVTATCIRVPVMRAHAESINLQFENPLDENTAREILKNAPGVVIIDDRKANQFPT 324

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           PLKVSNKD++AVGRIRQDVSLDGNKGLDIF+CGDQIRKGAALNAVQIAELLL
Sbjct: 325 PLKVSNKDDIAVGRIRQDVSLDGNKGLDIFICGDQIRKGAALNAVQIAELLL 376

[Close]

BLAST of Carg00143 vs. TrEMBL
Match: tr|A0A0A0KJ87|A0A0A0KJ87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021360 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.4e-51
Identity = 106/116 (91.38%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MPLKSDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAAN 60
           M LKSDANVKVTATCIRVPVMRAHA S+N QFENP DE+TAREILKNAPGVVIIDDR AN
Sbjct: 1   MLLKSDANVKVTATCIRVPVMRAHAGSINRQFENPHDENTAREILKNAPGVVIIDDRKAN 60

Query: 61  QFPTPLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           QFPTPLKVSNKD++AVGRIRQDVSLDGNKGLDIF+CGDQIRKGAALNAVQIAELLL
Sbjct: 61  QFPTPLKVSNKDDIAVGRIRQDVSLDGNKGLDIFICGDQIRKGAALNAVQIAELLL 116

[Close]

BLAST of Carg00143 vs. TrEMBL
Match: tr|A0A1S3BAE3|A0A1S3BAE3_CUCME (aspartate-semialdehyde dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103487549 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.1e-51
Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           SDANVKVTATCIRVPVMRAHAES+NLQFENPLDE+ AREILKN+PGVVIIDDR ANQFPT
Sbjct: 264 SDANVKVTATCIRVPVMRAHAESINLQFENPLDENAAREILKNSPGVVIIDDRKANQFPT 323

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           PLKVS KD++AVGRIRQDVSLDGNKGLDIF+CGDQIRKGAALNAVQIAELLL
Sbjct: 324 PLKVSKKDDIAVGRIRQDVSLDGNKGLDIFICGDQIRKGAALNAVQIAELLL 375

[Close]

BLAST of Carg00143 vs. TrEMBL
Match: tr|A0A1R3J3Q1|A0A1R3J3Q1_COCAP (Semialdehyde dehydrogenase, NAD-binding protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07841 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-49
Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           +D NVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVV+IDDRA+N FPT
Sbjct: 264 NDMNVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVVIDDRASNHFPT 323

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           PL+VSNKD+VAVGRIRQDVS +GN GLDIFVCGDQ+RKGAALNAVQIAELLL
Sbjct: 324 PLEVSNKDDVAVGRIRQDVSQEGNYGLDIFVCGDQVRKGAALNAVQIAELLL 375

[Close]

BLAST of Carg00143 vs. TrEMBL
Match: tr|A0A1R3HQG2|A0A1R3HQG2_9ROSI (Semialdehyde dehydrogenase, NAD-binding protein OS=Corchorus olitorius OX=93759 GN=COLO4_27642 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-49
Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 5   SDANVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVIIDDRAANQFPT 64
           +D NVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVV+IDDRA+N FPT
Sbjct: 264 NDMNVKVTATCIRVPVMRAHAESVNLQFENPLDEDTAREILKNAPGVVVIDDRASNHFPT 323

Query: 65  PLKVSNKDNVAVGRIRQDVSLDGNKGLDIFVCGDQIRKGAALNAVQIAELLL 117
           PL+VSNKD+VAVGRIRQDVS +GN GLDIFVCGDQ+RKGAALNAVQIAELLL
Sbjct: 324 PLEVSNKDDVAVGRIRQDVSQEGNYGLDIFVCGDQVRKGAALNAVQIAELLL 375

The following BLAST results are available for this feature:

BLAST of Carg00143 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941546.1	5.8e-54	99.11	uncharacterized protein LOC111446872 [Cucurbita moschata]	[more]
XP_022991287.1	5.8e-54	99.11	uncharacterized protein LOC111487985 [Cucurbita maxima]	[more]
XP_023524013.1	5.8e-54	99.11	uncharacterized protein LOC111788078 [Cucurbita pepo subsp. pepo]	[more]
XP_023517959.1	6.4e-53	95.54	uncharacterized protein LOC111781535 [Cucurbita pepo subsp. pepo]	[more]
XP_022995976.1	1.4e-52	94.64	uncharacterized protein LOC111491326 [Cucurbita maxima]	[more]

BLAST of Carg00143 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14810.1	2.8e-50	87.50	semialdehyde dehydrogenase family protein	[more]

BLAST of Carg00143 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P49420\|DHAS_PROMA	6.1e-31	55.36	Aspartate-semialdehyde dehydrogenase OS=Prochlorococcus marinus (strain SARG / C...	[more]
sp\|Q55512\|DHAS_SYNY3	5.7e-29	55.05	Aspartate-semialdehyde dehydrogenase OS=Synechocystis sp. (strain PCC 6803 / Kaz...	[more]
sp\|O67716\|DHAS_AQUAE	2.7e-26	50.45	Aspartate-semialdehyde dehydrogenase OS=Aquifex aeolicus (strain VF5) OX=224324 ...	[more]
sp\|Q59291\|DHAS_CAMJE	2.0e-21	48.11	Aspartate-semialdehyde dehydrogenase OS=Campylobacter jejuni subsp. jejuni serot...	[more]
sp\|Q9ZK28\|DHAS_HELPJ	2.0e-21	50.00	Aspartate-semialdehyde dehydrogenase OS=Helicobacter pylori (strain J99 / ATCC 7...	[more]

BLAST of Carg00143 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KIR3\|A0A0A0KIR3_CUCSA	1.2e-52	94.64	Aspartate-semialdehyde dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G021870 ...	[more]
tr\|A0A0A0KJ87\|A0A0A0KJ87_CUCSA	1.4e-51	91.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021360 PE=4 SV=1	[more]
tr\|A0A1S3BAE3\|A0A1S3BAE3_CUCME	5.1e-51	91.96	aspartate-semialdehyde dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103487549 PE=...	[more]
tr\|A0A1R3J3Q1\|A0A1R3J3Q1_COCAP	1.3e-49	90.18	Semialdehyde dehydrogenase, NAD-binding protein OS=Corchorus capsularis OX=21014...	[more]
tr\|A0A1R3HQG2\|A0A1R3HQG2_9ROSI	1.3e-49	90.18	Semialdehyde dehydrogenase, NAD-binding protein OS=Corchorus olitorius OX=93759 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity
GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0008652	cellular amino acid biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR012280	Semialdhyde_DH_dimer_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008652	cellular amino acid biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00143-RA	Carg00143-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.360.10		coord: 1..99 e-value: 5.3E-33 score: 116.3
None	No IPR available	PANTHER	PTHR10174	RETINALDEHYDE BINDING PROTEIN-RELATED	coord: 7..116
None	No IPR available	PANTHER	PTHR10174:SF2	ASPARTATE-SEMIALDEHYDE DEHYDROGENASE	coord: 7..116
None	No IPR available	SUPERFAMILY	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	coord: 5..103
IPR012280	Semialdehyde dehydrogenase, dimerisation domain	PFAM	PF02774	Semialdhyde_dhC	coord: 8..102 e-value: 3.8E-22 score: 79.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00143	Csa5G021360	Cucumber (Chinese Long) v2	carcuB0692
Carg00143	CSPI05G00600	Wild cucumber (PI 183967)	carcpiB0704
Carg00143	CsGy5G010850	Cucumber (Gy14) v2	carcgybB0667
Carg00143	CsaV3_5G014420	Cucumber (Chinese Long) v3	carcucB0705

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00143	Bottle gourd (USVL1VR-Ls)	carlsiB605
Carg00143	Melon (DHL92) v3.5.1	carmeB0675
Carg00143	Melon (DHL92) v3.6.1	carmedB0687
Carg00143	Watermelon (Charleston Gray)	carwcgB0651
Carg00143	Watermelon (97103) v1	carwmB0665
Carg00143	Watermelon (97103) v1	carwmB0667
Carg00143	Watermelon (97103) v2	carwmbB0700
Carg00143	Wax gourd	carwgoB0785
Carg00143	Silver-seed gourd	carcarB571
Carg00143	Cucurbita maxima (Rimu)	carcmaB0948
Carg00143	Cucurbita maxima (Rimu)	carcmaB0949
Carg00143	Cucurbita moschata (Rifu)	carcmoB0923
Carg00143	Cucurbita moschata (Rifu)	carcmoB0924
Carg00143	Cucurbita pepo (Zucchini)	carcpeB0938
Carg00143	Cucurbita pepo (Zucchini)	carcpeB0939