Carg00122 (gene) Silver-seed gourd

Overview
NameCarg00122
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionChlororespiratory reduction 3
LocationCucurbita_argyrosperma_scaffold_001 : 621966 .. 622632 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGCTTCTTCTGCATTTCTGTGACCAAAAATGTGGCTCTCGCTTCACTCAATCCCAGCGACGACTCTCACTCCCCTCCTCCCAAAACCAATGGCGCCGCCGAAACTATTCCGATCAACAATCCACGGTTACGCCGGCGGCTTCCAAAACCTCGTCGGCCCTCCGTTATTGAAATCGAACGTGCTATCGGTGCCGGAAGGTTCAGAGACGCGGATCCCAGGCAAGTCCGAGAGTTCTGTTTCGGTGTTCTGAACTTTATTGTAGTGAAATATGAGATGTAATCTGAAGTTTTGATGCTCAGGGATTTGGAAGAAGATAGGAAGGCTGCATTTGACATGTTTTTGATGAGTTTTACGGGGAAATATGAAGGGGCACTCATGAAGAAGCTTCGCGAGACAGGAGAATGGGTAACTGATCAGACTGAAACCAAATTTCAAGCTTCAGGTAACCAATTCTCTCGAAACTTGATTGTATTCTTGAGTAATGAACACTCCACTCCCTCTAGAATCTAGAGAATTGATTTGATTTTAATTTGCAGGAAAATCCTTTCTGCTGTTTACGTTTCAATGGGTTCTTCCAATTTGGGCATTCTCACTCCTTGTGGCTTCTGGGGTCATTAAGTTACCATTCAACACTCCATTTCTTGATCAACTTCTTACGTAA

mRNA sequence

ATGGCTCGCTTCTTCTGCATTTCTGTGACCAAAAATGTGGCTCTCGCTTCACTCAATCCCAGCGACGACTCTCACTCCCCTCCTCCCAAAACCAATGGCGCCGCCGAAACTATTCCGATCAACAATCCACGGTTACGCCGGCGGCTTCCAAAACCTCGTCGGCCCTCCGTTATTGAAATCGAACGTGCTATCGGTGCCGGAAGGTTCAGAGACGCGGATCCCAGGCAAGTCCGAGAGTTCTGTTTCGGTGTTCTGAACTTTATTGTAGTGAAATATGAGATGGATTTGGAAGAAGATAGGAAGGCTGCATTTGACATGTTTTTGATGAGTTTTACGGGGAAATATGAAGGGGCACTCATGAAGAAGCTTCGCGAGACAGGAGAATGGGTAACTGATCAGACTGAAACCAAATTTCAAGCTTCAGGAAAATCCTTTCTGCTGTTTACGTTTCAATGGGTTCTTCCAATTTGGGCATTCTCACTCCTTGTGGCTTCTGGGGTCATTAAGTTACCATTCAACACTCCATTTCTTGATCAACTTCTTACGTAA

Coding sequence (CDS)

ATGGCTCGCTTCTTCTGCATTTCTGTGACCAAAAATGTGGCTCTCGCTTCACTCAATCCCAGCGACGACTCTCACTCCCCTCCTCCCAAAACCAATGGCGCCGCCGAAACTATTCCGATCAACAATCCACGGTTACGCCGGCGGCTTCCAAAACCTCGTCGGCCCTCCGTTATTGAAATCGAACGTGCTATCGGTGCCGGAAGGTTCAGAGACGCGGATCCCAGGCAAGTCCGAGAGTTCTGTTTCGGTGTTCTGAACTTTATTGTAGTGAAATATGAGATGGATTTGGAAGAAGATAGGAAGGCTGCATTTGACATGTTTTTGATGAGTTTTACGGGGAAATATGAAGGGGCACTCATGAAGAAGCTTCGCGAGACAGGAGAATGGGTAACTGATCAGACTGAAACCAAATTTCAAGCTTCAGGAAAATCCTTTCTGCTGTTTACGTTTCAATGGGTTCTTCCAATTTGGGCATTCTCACTCCTTGTGGCTTCTGGGGTCATTAAGTTACCATTCAACACTCCATTTCTTGATCAACTTCTTACGTAA

Protein sequence

MARFFCISVTKNVALASLNPSDDSHSPPPKTNGAAETIPINNPRLRRRLPKPRRPSVIEIERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTGKYEGALMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFLDQLLT
Homology
[Close]
BLAST of Carg00122 vs. NCBI nr
Match: XP_023511915.1 (probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.5 bits (794), Expect = 3.9e-81
Identity = 161/182 (88.46%), Postives = 161/182 (88.46%), Query Frame = 0 

Query: 1   MARFFCISVTKNVALASLNPSDDSHSPPPKTNGAAETIPINNPRLRRRLPKPRRPSVIEI 60
           MA FFCISVTKNVALASLNPSDDSHSPPPKTNGAAETIPI NPRLRRRLPKPRRPSVIEI
Sbjct: 1   MACFFCISVTKNVALASLNPSDDSHSPPPKTNGAAETIPIKNPRLRRRLPKPRRPSVIEI 60

Query: 61  ERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTGKYEGALM 120
           ERAIGAGRFRDADPR                   DLEEDRKAAFDMFLMSFTGKYEGALM
Sbjct: 61  ERAIGAGRFRDADPR-------------------DLEEDRKAAFDMFLMSFTGKYEGALM 120

Query: 121 KKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFLDQL 180
           KKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFLDQL
Sbjct: 121 KKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFLDQL 163

Query: 181 LT 183
           LT
Sbjct: 181 LT 163

[Close]
BLAST of Carg00122 vs. NCBI nr
Match: XP_022985001.1 (probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 305.4 bits (781), Expect = 1.3e-79
Identity = 160/185 (86.49%), Postives = 162/185 (87.57%), Query Frame = 0 

Query: 1   MARFFCISVTKNVALASLNPSDDSHSPPPKTNGAAETIPINNPRLR---RRLPKPRRPSV 60
           MA FFCISVTKNVALASLNPSDDSHSPPPKTNGAAETIP+NNP+LR   RRLPKPRRPSV
Sbjct: 1   MACFFCISVTKNVALASLNPSDDSHSPPPKTNGAAETIPVNNPQLRRRQRRLPKPRRPSV 60

Query: 61  IEIERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTGKYEG 120
           IEIERAIGAGRFRDADPR                   DLEEDRKAAFDMFLMSFTGKYEG
Sbjct: 61  IEIERAIGAGRFRDADPR-------------------DLEEDRKAAFDMFLMSFTGKYEG 120

Query: 121 ALMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFL 180
           ALMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFL
Sbjct: 121 ALMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFL 166

Query: 181 DQLLT 183
           DQLLT
Sbjct: 181 DQLLT 166

[Close]
BLAST of Carg00122 vs. NCBI nr
Match: XP_022942899.1 (probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 305.1 bits (780), Expect = 1.6e-79
Identity = 158/182 (86.81%), Postives = 160/182 (87.91%), Query Frame = 0 

Query: 1   MARFFCISVTKNVALASLNPSDDSHSPPPKTNGAAETIPINNPRLRRRLPKPRRPSVIEI 60
           MA F CISVTKNVA+ASLNPSDDSHSPPPKTNGAA+TIPI NPRLRRRLPKPRRPSVIEI
Sbjct: 1   MACFSCISVTKNVAIASLNPSDDSHSPPPKTNGAAKTIPITNPRLRRRLPKPRRPSVIEI 60

Query: 61  ERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTGKYEGALM 120
           ERAIGAGRFRDADPR                   DLEEDRKAAFDMFLMSFTGKYEGALM
Sbjct: 61  ERAIGAGRFRDADPR-------------------DLEEDRKAAFDMFLMSFTGKYEGALM 120

Query: 121 KKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFLDQL 180
           KKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFLDQL
Sbjct: 121 KKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFLDQL 163

Query: 181 LT 183
           LT
Sbjct: 181 LT 163

[Close]
BLAST of Carg00122 vs. NCBI nr
Match: XP_022155388.1 (probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Momordica charantia] >XP_022155389.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Momordica charantia])

HSP 1 Score: 259.2 bits (661), Expect = 1.0e-65
Identity = 138/181 (76.24%), Postives = 145/181 (80.11%), Query Frame = 0 

Query: 1   MARFFCISVTKNVALASLNPSDDSHSPPPKTNGAAETIPINNPRLRRRLPKPRRPSVIEI 60
           +A F CISVTKNVALASLN SDDSHSP PK NG A+TIPI N    RRLPKPRRPSVIEI
Sbjct: 5   LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEI 64

Query: 61  ERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTGKYEGALM 120
           ERAIGAGRFRDADPR                   DLEEDRK  FDMFL+SFT KYEG LM
Sbjct: 65  ERAIGAGRFRDADPR-------------------DLEEDRKTVFDMFLLSFTEKYEGPLM 124

Query: 121 KKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFLDQL 180
           KKLRETGEWVT+QTETKFQASGK FLLFTFQW+LPIWA SLLVASGVIKLPF+TPFLD+L
Sbjct: 125 KKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDEL 165

Query: 181 L 182
           L
Sbjct: 185 L 165

[Close]
BLAST of Carg00122 vs. NCBI nr
Match: XP_004142275.1 (PREDICTED: uncharacterized protein LOC101205502 [Cucumis sativus] >XP_011654474.1 PREDICTED: uncharacterized protein LOC101205502 [Cucumis sativus] >KGN49628.1 hypothetical protein Csa_5G033460 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 8.2e-63
Identity = 135/183 (73.77%), Postives = 143/183 (78.14%), Query Frame = 0 

Query: 1   MARFFCISVTKNVALASLNPS--DDSHSPPPKTNGAAETIPINNPRLRRRLPKPRRPSVI 60
           MA  F IS TKNVA ASLNP     SHSPP KTN AA TIPINNPRLRR+L  P RPS+I
Sbjct: 1   MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLI 60

Query: 61  EIERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTGKYEGA 120
           EIERAIG GRFRDADPR                   +LEED+KAAFDMFLMSFTGKYE  
Sbjct: 61  EIERAIGGGRFRDADPR-------------------ELEEDKKAAFDMFLMSFTGKYEAP 120

Query: 121 LMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFLD 180
           LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPF+TPFL+
Sbjct: 121 LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLN 164

Query: 181 QLL 182
           +LL
Sbjct: 181 ELL 164

[Close]
BLAST of Carg00122 vs. TAIR10
Match: AT2G01590.1 (chlororespiratory reduction 3)

HSP 1 Score: 107.5 bits (267), Expect = 9.1e-24
Identity = 56/128 (43.75%), Postives = 73/128 (57.03%), Query Frame = 0 

Query: 54  RPSVIEIERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTG 113
           +PS+ +IERA G+G +RD++                       E D    FD  L+    
Sbjct: 68  KPSIAQIERAFGSGSYRDSEG----------------------EMDMNTVFDELLLGHAN 127

Query: 114 KYEGALMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFN 173
           K+E  + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW  SLLVA GVIKLPF+
Sbjct: 128 KFESKIEKKLREIGEIFVARTEPKLRSSGKPVLMFTIQWILPIWIMSLLVACGVIKLPFS 173

Query: 174 TPFLDQLL 182
            PFLD L+
Sbjct: 188 IPFLDDLI 173

[Close]
BLAST of Carg00122 vs. Swiss-Prot
Match: sp|Q9ZVE7|CRR3_ARATH (Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR3 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-22
Identity = 56/128 (43.75%), Postives = 73/128 (57.03%), Query Frame = 0 

Query: 54  RPSVIEIERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTG 113
           +PS+ +IERA G+G +RD++                       E D    FD  L+    
Sbjct: 68  KPSIAQIERAFGSGSYRDSEG----------------------EMDMNTVFDELLLGHAN 127

Query: 114 KYEGALMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFN 173
           K+E  + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW  SLLVA GVIKLPF+
Sbjct: 128 KFESKIEKKLREIGEIFVARTEPKLRSSGKPVLMFTIQWILPIWIMSLLVACGVIKLPFS 173

Query: 174 TPFLDQLL 182
            PFLD L+
Sbjct: 188 IPFLDDLI 173

[Close]
BLAST of Carg00122 vs. TrEMBL
Match: tr|A0A0A0KJA3|A0A0A0KJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G033460 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 5.4e-63
Identity = 135/183 (73.77%), Postives = 143/183 (78.14%), Query Frame = 0 

Query: 1   MARFFCISVTKNVALASLNPS--DDSHSPPPKTNGAAETIPINNPRLRRRLPKPRRPSVI 60
           MA  F IS TKNVA ASLNP     SHSPP KTN AA TIPINNPRLRR+L  P RPS+I
Sbjct: 1   MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLI 60

Query: 61  EIERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTGKYEGA 120
           EIERAIG GRFRDADPR                   +LEED+KAAFDMFLMSFTGKYE  
Sbjct: 61  EIERAIGGGRFRDADPR-------------------ELEEDKKAAFDMFLMSFTGKYEAP 120

Query: 121 LMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPFLD 180
           LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPF+TPFL+
Sbjct: 121 LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLN 164

Query: 181 QLL 182
           +LL
Sbjct: 181 ELL 164

[Close]
BLAST of Carg00122 vs. TrEMBL
Match: tr|A0A1S3CM65|A0A1S3CM65_CUCME (probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502523 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.5e-57
Identity = 128/185 (69.19%), Postives = 135/185 (72.97%), Query Frame = 0 

Query: 1   MARFFCISVTKNVA----LASLNPSDDSHSPPPKTNGAAETIPINNPRLRRRLPKPRRPS 60
           MA  F IS+TKNVA                 P KTN AA+TIPI  PRLR +L  PRRPS
Sbjct: 12  MASLFSISITKNVAXXXXXXXXXXXXXXXXXPLKTNDAADTIPIKTPRLRPKLLNPRRPS 71

Query: 61  VIEIERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTGKYE 120
           VIEIERAIG GRFRDADPR                   DLEED+KAAFDMFLMSFTGKYE
Sbjct: 72  VIEIERAIGGGRFRDADPR-------------------DLEEDKKAAFDMFLMSFTGKYE 131

Query: 121 GALMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPF 180
           G LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPFNTPF
Sbjct: 132 GPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPF 177

Query: 181 LDQLL 182
           L++LL
Sbjct: 192 LNELL 177

[Close]
BLAST of Carg00122 vs. TrEMBL
Match: tr|A0A1S3CMK8|A0A1S3CMK8_CUCME (probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502523 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.1e-37
Identity = 93/146 (63.70%), Postives = 98/146 (67.12%), Query Frame = 0 

Query: 1   MARFFCISVTKNVA----LASLNPSDDSHSPPPKTNGAAETIPINNPRLRRRLPKPRRPS 60
           MA  F IS+TKNVA                 P KTN AA+TIPI  PRLR +L  PRRPS
Sbjct: 12  MASLFSISITKNVAXXXXXXXXXXXXXXXXXPLKTNDAADTIPIKTPRLRPKLLNPRRPS 71

Query: 61  VIEIERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTGKYE 120
           VIEIERAIG GRFRDADPR                   DLEED+KAAFDMFLMSFTGKYE
Sbjct: 72  VIEIERAIGGGRFRDADPR-------------------DLEEDKKAAFDMFLMSFTGKYE 131

Query: 121 GALMKKLRETGEWVTDQTETKFQASG 143
           G LMKKLRETGEWVT+QTETKFQASG
Sbjct: 132 GPLMKKLRETGEWVTNQTETKFQASG 138

[Close]
BLAST of Carg00122 vs. TrEMBL
Match: tr|A0A2I4F4N7|A0A2I4F4N7_9ROSI (probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic OS=Juglans regia OX=51240 GN=LOC108995494 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.2e-35
Identity = 87/185 (47.03%), Postives = 116/185 (62.70%), Query Frame = 0 

Query: 6   CISVTKNVALASLNPSDDSHSPPPKTNGAAETIPINNPRLRRRLP---------KPRRPS 65
           C+S+TK +A ASL  +D   SPPP      +T     P +RR  P         K ++PS
Sbjct: 6   CLSITKPLAFASLPQND---SPPP-----IQTTHTTKPPMRRPTPSTLPRTQQRKRQQPS 65

Query: 66  VIEIERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMSFTGKYE 125
           + EIERAIGAGR+RD D R                   +L+E+++A FD   +SF+GK+E
Sbjct: 66  IAEIERAIGAGRYRDIDAR-------------------ELKEEQEAEFDFISLSFSGKFE 125

Query: 126 GALMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKLPFNTPF 182
           G + KKLRETGEW+   TET+F+ASGK  L+ TFQW+LPIW F LL+A GVIKLPF++PF
Sbjct: 126 GPVEKKLRETGEWLDTWTETEFRASGKKILMVTFQWILPIWMFFLLIACGVIKLPFSSPF 163

[Close]
BLAST of Carg00122 vs. TrEMBL
Match: tr|A0A251R6V4|A0A251R6V4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G330200 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.9e-31
Identity = 75/131 (57.25%), Postives = 91/131 (69.47%), Query Frame = 0 

Query: 51  KPRRPSVIEIERAIGAGRFRDADPRQVREFCFGVLNFIVVKYEMDLEEDRKAAFDMFLMS 110
           KPR+PSVIEIERAIG GRFRDADPR                   DLEE + A FDM +M+
Sbjct: 67  KPRQPSVIEIERAIGGGRFRDADPR-------------------DLEEQKNAKFDMSMMN 126

Query: 111 FTGKYEGALMKKLRETGEWVTDQTETKFQASGKSFLLFTFQWVLPIWAFSLLVASGVIKL 170
           F  K+EG + KKLRETGEW+T++TE  F+ SGK  L F F W+LPIW+FSLLVASG IKL
Sbjct: 127 FPSKFEGPVEKKLRETGEWITNKTERGFRLSGKKILKFVFLWLLPIWSFSLLVASGTIKL 176

Query: 171 PFNTPFLDQLL 182
             N+PF++ L+
Sbjct: 187 --NSPFINDLI 176

The following BLAST results are available for this feature:
BLAST of Carg00122 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023511915.13.9e-8188.46probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita pepo subsp... [more]
XP_022985001.11.3e-7986.49probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita maxima][more]
XP_022942899.11.6e-7986.81probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita moschata][more]
XP_022155388.11.0e-6576.24probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Momordica charantia]... [more]
XP_004142275.18.2e-6373.77PREDICTED: uncharacterized protein LOC101205502 [Cucumis sativus] >XP_011654474.... [more]
BLAST of Carg00122 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01590.19.1e-2443.75chlororespiratory reduction 3[more]
BLAST of Carg00122 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZVE7|CRR3_ARATH1.6e-2243.75Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic OS=Arabidopsis thalia... [more]
BLAST of Carg00122 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KJA3|A0A0A0KJA3_CUCSA5.4e-6373.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G033460 PE=4 SV=1[more]
tr|A0A1S3CM65|A0A1S3CM65_CUCME1.5e-5769.19probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X1 OS=Cucumis... [more]
tr|A0A1S3CMK8|A0A1S3CMK8_CUCME5.1e-3763.70probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X2 OS=Cucumis... [more]
tr|A0A2I4F4N7|A0A2I4F4N7_9ROSI6.2e-3547.03probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic OS=Juglans regia OX=5... [more]
tr|A0A251R6V4|A0A251R6V4_PRUPE1.9e-3157.25Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G330200 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0010598NAD(P)H dehydrogenase complex (plastoquinone)
GO:0009535chloroplast thylakoid membrane
Vocabulary: Biological Process
TermDefinition
GO:0009773photosynthetic electron transport in photosystem I
Vocabulary: INTERPRO
TermDefinition
IPR038931CRR3
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009773 photosynthetic electron transport in photosystem I
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00122-RACarg00122-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.357.10coord: 44..112
e-value: 8.1E-5
score: 25.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..38
IPR038931Probable NAD(P)H dehydrogenase subunit CRR3, chloroplasticPANTHERPTHR36340FAMILY NOT NAMEDcoord: 6..181