Carg00082 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGAGAGAAGTCGTGAGAAGCGCGCAGACCAGCCATTGTTGTAGCTACACGTGCTTTCTTCCCGGATCGGCCCTCTCCTGCGGTGGCACCCATTTTTCTGCGGCCGAGACACACTCCGTCGACTCCGGACCCTATTTTATCGTCCTCTGAATCCAATCCCGAACTTATTTCTAGCTAACCCTCAAGCATTCACTTCCATTTTCCTTTTTCATTTTCGCATTCTTGTCCAATTTCTTCAACCCGTCTCGCTGTTCTGCAGCAATGGCTGTCAATTCGTCGGTCCATTTCGCTCCCCCGCCGCTTCGTTCACTGCCTCGTTCCTCTTTCGCTTTCTTTTCTCGCATCTTTTTGCGCCCTGTTTCGGCCACTGACTTCCGTAGGCGGAGCCTTGTCTTGGTTCGTGCCCAAGCGCCCAGTACCGATGGCTGTGGATCCAACCAGCCGCTCGGTTTGGAGGAATCGGGACCTTCGCTCGGGTCCACTGGTTCGCCGTCCTCGTCCTCGGTGATTGATTTCCTCACATTGTGCTATCGTCTTAAGGTATTCGCACAATTTGGCTAACGAGAAACTGGGGGGGATTTTTTCCCCCCAATTTATTAACCTTTTGTTCTTTACTGATTCATGGAGAATATGAAATGAACTTTAAGTAAGTTGGGTGAGTGGCTTATTCTTGATTTATTTGGCAATTAGAATTCATTTTGGGGAACTTTTCATTGTTGGCAGAGGAACTGATATTTGTTTATGCGTGTTATGGGAGAAACGAGGTGATCAGAAAATTATGGCCATTAGAGGTAATAATCATTTGGCTATTCTCTCTTCCATGTAGACAACAAAGAGAAAGGGGTGGATCAATCATGGAATAAATGGTCCCGAATCAATTGCTGATCATATGTACCGCATGGCTCTGATGAGTTTGATAACTGATGACCTTCCAGGAGTGAACAGAGAAAGGTTGCTCTTCTTCTTCACCTGGAAATTTAATAATCTGGTACGAACATCCTTTTATTGAACTTTGTTTCTCTCTTTTCTTGTTCTACTTTGACCAGGTGTATCAAGATAGCTCTTGTTCATGATATTGCTGAAGGTACTTTCTAACACCTTTTTTCCCCTTAATTTCCAGAACTTTATTCTAGCAATTATGCATCTTTCTGTCAAGTAATGATATTGTTATTCAACTTATGGAGATAGGATTACTTTAATTCGTTGGTTTTGAGAGCTATCTCGACATATTTTCTACAAGGCCCAAGCCCACAACTATCAAATATTGTTCTCTTTGGACTTTCCTTTTCGGTCTTCCCCTCAAGGTTTTTAAAACGCTTATGCTACCCTTATAAAGAATGCTTTGTTCTCCTCCCCAACCGACGTGGGATCTCACATCTCTCCTTGAAAGGGATCTCTCCTTGAAAGGGTCCCCATGCCTGGCAGTAAAACTTTGGAGAAGTTATGGGGAATTTCTTATGGGATGGGATTAATGAGGGAAAGAGGCCTCCTTTATTGAGGTGGGATATAGTGGGCAAGCAATTGAATCATAACGGTTGATATTGTATTTGGACTATGATAGCTATTGTTGGAGATATAACGCCATCTGATGGTGTGCCAAAAGAAGAAAAGAGCAGAAGAGAGTCAGCAGCCCTAAATGAAATATGCCAACTTCTTGGTGGAGGCAAGAGAGGTACGAAAATATTCTTATGATGTGGGTTTGGTTAGTAGTCGAAAACGTATTGCCATTAAATCACGTTCCTTTTTTCTTTTTGGTTCTTGAATATTTTCAGCCGACGAGATCAAAGAACTTTGGACCGAGTATGAAAACAATTCTTCTTTGGAGGCTAATCTTGTGAAAGACTTTGATAAAGTATGTATCCCAAAATTACTTCATTCATGAAAGTGGTGGCATATGGAAAAACATGTTGTCTGAGTTTCATCTCAATAAACTATCCACAAATTGTAGTGTTGGTTATAGAAGATTTTGTTTCCTTTTTAGTATAAGTAATGTAAAGTTGATATTTTACGTGTTGTGTTACGCTCGTATTGACACTTACATAAGATTTAGAACTCTCATTTTCTGAAAGTTGTATGTTTTGTAGGTCGAATTAATTCTTCAAGCATTTGAATATGAAATAGGTAACTACGAAGCTTTGTTCTGGCTGCAGTATAGATATTAGTCGTTTGAAATTTGACATGAATTTCATTACACTGGCAGAACATGGGAAGGTGCTGGATGAGTTTTTCCATTCAACAGCTGGTACAGTTTGAATTGCATTATTGAACTCTTGATTTTTATCTTAAATTACCATTAAATTATGTATGCTTTTGCATTTTTCAGGGAAATTTCAGACGGAGGTAGGAAAGAGTTGGGCAGCGGAGGTAATGTCCAGAAGAAATTCTAGATTGAGAAACAACCAAAACTGATGTTCTAGATACTTCATCCTATATTGTTCATCCAACTTTACTTATACAAGCTAAAGAAG AGAGAGAGAAGTCGTGAGAAGCGCGCAGACCAGCCATTGTTGTAGCTACACGTGCTTTCTTCCCGGATCGGCCCTCTCCTGCGGTGGCACCCATTTTTCTGCGGCCGAGACACACTCCGTCGACTCCGGACCCTATTTTATCGTCCTCTGAATCCAATCCCGAACTTATTTCTAGCTAACCCTCAAGCATTCACTTCCATTTTCCTTTTTCATTTTCGCATTCTTGTCCAATTTCTTCAACCCGTCTCGCTGTTCTGCAGCAATGGCTGTCAATTCGTCGGTCCATTTCGCTCCCCCGCCGCTTCGTTCACTGCCTCGTTCCTCTTTCGCTTTCTTTTCTCGCATCTTTTTGCGCCCTGTTTCGGCCACTGACTTCCGTAGGCGGAGCCTTGTCTTGGTTCGTGCCCAAGCGCCCAGTACCGATGGCTGTGGATCCAACCAGCCGCTCGGTTTGGAGGAATCGGGACCTTCGCTCGGGTCCACTGGTTCGCCGTCCTCGTCCTCGGTGATTGATTTCCTCACATTGTGCTATCGTCTTAAGACAACAAAGAGAAAGGGGTGGATCAATCATGGAATAAATGGTCCCGAATCAATTGCTGATCATATGTACCGCATGGCTCTGATGAGTTTGATAACTGATGACCTTCCAGGAGTGAACAGAGAAAGGTGTATCAAGATAGCTCTTGTTCATGATATTGCTGAAGCTATTGTTGGAGATATAACGCCATCTGATGGTGTGCCAAAAGAAGAAAAGAGCAGAAGAGAGTCAGCAGCCCTAAATGAAATATGCCAACTTCTTGGTGGAGGCAAGAGAGCCGACGAGATCAAAGAACTTTGGACCGAGTATGAAAACAATTCTTCTTTGGAGGCTAATCTTGTGAAAGACTTTGATAAAGTAACTACGAAGCTTTGTTCTGGCTGCAGTATAGATATTAGTCGTTTGAAATTTGACATGAATTTCATTACACTGGCAGAACATGGGAAGGTGCTGGATGAGTTTTTCCATTCAACAGCTGGGAAATTTCAGACGGAGGTAGGAAAGAGTTGGGCAGCGGAGGTAATGTCCAGAAGAAATTCTAGATTGAGAAACAACCAAAACTGATGTTCTAGATACTTCATCCTATATTGTTCATCCAACTTTACTTATACAAGCTAAAGAAG ATGGCTGTCAATTCGTCGGTCCATTTCGCTCCCCCGCCGCTTCGTTCACTGCCTCGTTCCTCTTTCGCTTTCTTTTCTCGCATCTTTTTGCGCCCTGTTTCGGCCACTGACTTCCGTAGGCGGAGCCTTGTCTTGGTTCGTGCCCAAGCGCCCAGTACCGATGGCTGTGGATCCAACCAGCCGCTCGGTTTGGAGGAATCGGGACCTTCGCTCGGGTCCACTGGTTCGCCGTCCTCGTCCTCGGTGATTGATTTCCTCACATTGTGCTATCGTCTTAAGACAACAAAGAGAAAGGGGTGGATCAATCATGGAATAAATGGTCCCGAATCAATTGCTGATCATATGTACCGCATGGCTCTGATGAGTTTGATAACTGATGACCTTCCAGGAGTGAACAGAGAAAGGTGTATCAAGATAGCTCTTGTTCATGATATTGCTGAAGCTATTGTTGGAGATATAACGCCATCTGATGGTGTGCCAAAAGAAGAAAAGAGCAGAAGAGAGTCAGCAGCCCTAAATGAAATATGCCAACTTCTTGGTGGAGGCAAGAGAGCCGACGAGATCAAAGAACTTTGGACCGAGTATGAAAACAATTCTTCTTTGGAGGCTAATCTTGTGAAAGACTTTGATAAAGTAACTACGAAGCTTTGTTCTGGCTGCAGTATAGATATTAGTCGTTTGAAATTTGACATGAATTTCATTACACTGGCAGAACATGGGAAGGTGCTGGATGAGTTTTTCCATTCAACAGCTGGGAAATTTCAGACGGAGGTAGGAAAGAGTTGGGCAGCGGAGGTAATGTCCAGAAGAAATTCTAGATTGAGAAACAACCAAAACTGA MAVNSSVHFAPPPLRSLPRSSFAFFSRIFLRPVSATDFRRRSLVLVRAQAPSTDGCGSNQPLGLEESGPSLGSTGSPSSSSVIDFLTLCYRLKTTKRKGWINHGINGPESIADHMYRMALMSLITDDLPGVNRERCIKIALVHDIAEAIVGDITPSDGVPKEEKSRRESAALNEICQLLGGGKRADEIKELWTEYENNSSLEANLVKDFDKVTTKLCSGCSIDISRLKFDMNFITLAEHGKVLDEFFHSTAGKFQTEVGKSWAAEVMSRRNSRLRNNQN
BLAST of Carg00082 vs. NCBI nr
Match: XP_022941636.1 (HD domain-containing protein C4G3.17-like [Cucurbita moschata] >XP_022941637.1 HD domain-containing protein C4G3.17-like [Cucurbita moschata]) HSP 1 Score: 480.7 bits (1236), Expect = 3.3e-132 Identity = 247/279 (88.53%), Postives = 254/279 (91.04%), Query Frame = 0
BLAST of Carg00082 vs. NCBI nr
Match: XP_023545970.1 (HD domain-containing protein C4G3.17-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 477.2 bits (1227), Expect = 3.7e-131 Identity = 245/279 (87.81%), Postives = 254/279 (91.04%), Query Frame = 0
BLAST of Carg00082 vs. NCBI nr
Match: XP_022991251.1 (HD domain-containing protein C4G3.17-like [Cucurbita maxima]) HSP 1 Score: 469.9 bits (1208), Expect = 5.9e-129 Identity = 242/279 (86.74%), Postives = 252/279 (90.32%), Query Frame = 0
BLAST of Carg00082 vs. NCBI nr
Match: XP_022969821.1 (HD domain-containing protein C4G3.17 [Cucurbita maxima]) HSP 1 Score: 436.0 bits (1120), Expect = 9.4e-119 Identity = 225/279 (80.65%), Postives = 239/279 (85.66%), Query Frame = 0
BLAST of Carg00082 vs. NCBI nr
Match: XP_023551621.1 (HD domain-containing protein C4G3.17 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 434.1 bits (1115), Expect = 3.6e-118 Identity = 225/279 (80.65%), Postives = 237/279 (84.95%), Query Frame = 0
BLAST of Carg00082 vs. TAIR10
Match: AT1G26160.1 (Metal-dependent phosphohydrolase) HSP 1 Score: 302.4 bits (773), Expect = 2.9e-82 Identity = 169/283 (59.72%), Postives = 202/283 (71.38%), Query Frame = 0
BLAST of Carg00082 vs. TAIR10
Match: AT2G23820.2 (Metal-dependent phosphohydrolase) HSP 1 Score: 238.0 bits (606), Expect = 6.8e-63 Identity = 116/191 (60.73%), Postives = 145/191 (75.92%), Query Frame = 0
BLAST of Carg00082 vs. Swiss-Prot
Match: sp|P87242|YC0H_SCHPO (HD domain-containing protein C4G3.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC4G3.17 PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.4e-35 Identity = 76/136 (55.88%), Postives = 98/136 (72.06%), Query Frame = 0
BLAST of Carg00082 vs. Swiss-Prot
Match: sp|Q3SXD3|HDDC2_MOUSE (HD domain-containing protein 2 OS=Mus musculus OX=10090 GN=Hddc2 PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.3e-34 Identity = 84/205 (40.98%), Postives = 122/205 (59.51%), Query Frame = 0
BLAST of Carg00082 vs. Swiss-Prot
Match: sp|Q66L17|HDDC2_XENLA (HD domain-containing protein 2 OS=Xenopus laevis OX=8355 GN=hddc2 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.3e-34 Identity = 81/209 (38.76%), Postives = 127/209 (60.77%), Query Frame = 0
BLAST of Carg00082 vs. Swiss-Prot
Match: sp|Q7Z4H3|HDDC2_HUMAN (HD domain-containing protein 2 OS=Homo sapiens OX=9606 GN=HDDC2 PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 8.3e-34 Identity = 78/194 (40.21%), Postives = 115/194 (59.28%), Query Frame = 0
BLAST of Carg00082 vs. Swiss-Prot
Match: sp|Q0P565|HDDC2_BOVIN (HD domain-containing protein 2 OS=Bos taurus OX=9913 GN=HDDC2 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.9e-33 Identity = 79/208 (37.98%), Postives = 120/208 (57.69%), Query Frame = 0
BLAST of Carg00082 vs. TrEMBL
Match: tr|A0A0A0LHY9|A0A0A0LHY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G116270 PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 5.5e-115 Identity = 219/279 (78.49%), Postives = 235/279 (84.23%), Query Frame = 0
BLAST of Carg00082 vs. TrEMBL
Match: tr|A0A1S3C4X1|A0A1S3C4X1_CUCME (HD domain-containing protein C4G3.17 OS=Cucumis melo OX=3656 GN=LOC103496922 PE=4 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 1.3e-113 Identity = 217/279 (77.78%), Postives = 234/279 (83.87%), Query Frame = 0
BLAST of Carg00082 vs. TrEMBL
Match: tr|A0A218XW77|A0A218XW77_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr024153 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 3.1e-94 Identity = 187/275 (68.00%), Postives = 215/275 (78.18%), Query Frame = 0
BLAST of Carg00082 vs. TrEMBL
Match: tr|A0A251R5D0|A0A251R5D0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G301100 PE=4 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 1.5e-93 Identity = 188/293 (64.16%), Postives = 218/293 (74.40%), Query Frame = 0
BLAST of Carg00082 vs. TrEMBL
Match: tr|A0A251R837|A0A251R837_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G301100 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 3.4e-93 Identity = 184/280 (65.71%), Postives = 216/280 (77.14%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |