CSPI07G22610 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G22610
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRING-H2 finger protein ATL1
LocationChr7 : 19131511 .. 19132212 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCAGTTCTCATGTCGTTTTATGAAGATGATTAATACCTGGAAGGCTGGAACAATTGCCAAATTTGTAAATTCGTCCATAAGATTTGCCGTTCATTGTTTTCGTACAGCTGCAGCATCTTTATACAATTGCTATGGTTCAGCACGACACTTAAGGGCTCCGAATTTGCTGAATATTGCATTCAATTTTACTTCCTTACCATTCCGTATGTCTGTTCTCTTCATCTGCTCCGGCATTGCCATCATTTGCTCGCTGTCTATAGCCGTCTTGTTCTTCAACCTTACGATGATACTGGGATGGTTTAATTGCTGTTGCCGTTCGCCTGAGATGACTAACGTTAAGAATATTAAATATGAAGACTCAAATCTTATGAAGATCTCAACTATCATGTACAAGAAAGAAAACAAGAGTGAAGAAACTAATATTACAAGTGAATGTGCTTTGTGCTTGTCACCTTATGAAGATGAGGAATGCATACGGGAGCTTCTTGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTATTCACATTCGAACTGCCCGCTCTGCCGGACTCCACTTGGCCGTGTAGCTTGTATTAATGGGGAGTTGACATCAGGGGTGGTAGTCGCCATTAGCAACAGTCTCCAGATTGAGACTTCTACTCATGGAAGTCAGAGGGAGGCGTCACCTGAAAACATGGTTTAA

mRNA sequence

ATGACTCAGTTCTCATGTCGTTTTATGAAGATGATTAATACCTGGAAGGCTGGAACAATTGCCAAATTTGTAAATTCGTCCATAAGATTTGCCGTTCATTGTTTTCGTACAGCTGCAGCATCTTTATACAATTGCTATGGTTCAGCACGACACTTAAGGGCTCCGAATTTGCTGAATATTGCATTCAATTTTACTTCCTTACCATTCCGTATGTCTGTTCTCTTCATCTGCTCCGGCATTGCCATCATTTGCTCGCTGTCTATAGCCGTCTTGTTCTTCAACCTTACGATGATACTGGGATGGTTTAATTGCTGTTGCCGTTCGCCTGAGATGACTAACGTTAAGAATATTAAATATGAAGACTCAAATCTTATGAAGATCTCAACTATCATGTACAAGAAAGAAAACAAGAGTGAAGAAACTAATATTACAAGTGAATGTGCTTTGTGCTTGTCACCTTATGAAGATGAGGAATGCATACGGGAGCTTCTTGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTATTCACATTCGAACTGCCCGCTCTGCCGGACTCCACTTGGCCGTGTAGCTTGTATTAATGGGGAGTTGACATCAGGGGTGGTAGTCGCCATTAGCAACAGTCTCCAGATTGAGACTTCTACTCATGGAAGTCAGAGGGAGGCGTCACCTGAAAACATGGTTTAA

Coding sequence (CDS)

ATGACTCAGTTCTCATGTCGTTTTATGAAGATGATTAATACCTGGAAGGCTGGAACAATTGCCAAATTTGTAAATTCGTCCATAAGATTTGCCGTTCATTGTTTTCGTACAGCTGCAGCATCTTTATACAATTGCTATGGTTCAGCACGACACTTAAGGGCTCCGAATTTGCTGAATATTGCATTCAATTTTACTTCCTTACCATTCCGTATGTCTGTTCTCTTCATCTGCTCCGGCATTGCCATCATTTGCTCGCTGTCTATAGCCGTCTTGTTCTTCAACCTTACGATGATACTGGGATGGTTTAATTGCTGTTGCCGTTCGCCTGAGATGACTAACGTTAAGAATATTAAATATGAAGACTCAAATCTTATGAAGATCTCAACTATCATGTACAAGAAAGAAAACAAGAGTGAAGAAACTAATATTACAAGTGAATGTGCTTTGTGCTTGTCACCTTATGAAGATGAGGAATGCATACGGGAGCTTCTTGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTATTCACATTCGAACTGCCCGCTCTGCCGGACTCCACTTGGCCGTGTAGCTTGTATTAATGGGGAGTTGACATCAGGGGTGGTAGTCGCCATTAGCAACAGTCTCCAGATTGAGACTTCTACTCATGGAAGTCAGAGGGAGGCGTCACCTGAAAACATGGTTTAA
Homology
[Close]
BLAST of CSPI07G22610 vs. Swiss-Prot
Match: ATL16_ARATH (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 1 

Query: 131 MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRT 190
           ++  E + EE   + EC++CLS ++DEE +R +  C+H+FH  CIDVWL +++NCPLCRT
Sbjct: 122 VFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRT 181

Query: 191 PLGRVAC 198
              RV+C
Sbjct: 182 ---RVSC 185

[Close]
BLAST of CSPI07G22610 vs. Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-12
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 1 

Query: 120 EDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWL 179
           ++S +  I+   Y+K +   E+   S+C++CLS +++ E +R L  CNH FH  CID WL
Sbjct: 135 DESLIKSITVYKYRKMDGFVES---SDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWL 194

Query: 180 YSHSNCPLCRTPLGRVACIN-GELTSGVVVAISNSL 215
            SHSNCPLCR  +   + +   +LT+  +V  +NS+
Sbjct: 195 KSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSI 227

[Close]
BLAST of CSPI07G22610 vs. Swiss-Prot
Match: ATL32_ARATH (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3)

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-12
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1 

Query: 134 KENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLG 193
           KE+K    ++  ECA+CL+  ED E +R L  CNH+FH  CID WLYSH+ CP+CR+ L 
Sbjct: 113 KESKIGSKDL--ECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLT 172

Query: 194 RVACINGELTSGVVVA 210
             +   G+   GV +A
Sbjct: 173 AKSNKPGDEDDGVPLA 186

[Close]
BLAST of CSPI07G22610 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.3e-12
Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 1 

Query: 145 SECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCR---TPLGRVACINGE 204
           S+C++CLS +E+ E +R L  CNH FH  CID WL SHSNCPLCR   T +       G+
Sbjct: 140 SDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQ 199

Query: 205 LTSGVVVAISNS 214
             S VV   SNS
Sbjct: 200 NVSVVVANQSNS 211

[Close]
BLAST of CSPI07G22610 vs. Swiss-Prot
Match: ATL63_ARATH (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.7e-12
Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 1 

Query: 99  LGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEE 158
           LG F+    SP  T  ++ K  DS+++    +   +EN+ EE +   EC +CL  +E  +
Sbjct: 91  LGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENE-EEEDEEEECVICLGLWEAGD 150

Query: 159 CIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIET 218
             R+L  C H FH  CID+WL SHS CPLCR+P              V+ A+S+   ++ 
Sbjct: 151 FGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSP--------------VLAAVSDEENLKL 204

Query: 219 STHGSQREA 228
           + +  + EA
Sbjct: 211 AVNAVEEEA 204

[Close]
BLAST of CSPI07G22610 vs. TrEMBL
Match: A0A0A0KAX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G450560 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.9e-86
Identity = 160/163 (98.16%), Postives = 162/163 (99.39%), Query Frame = 1 

Query: 71  MSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTI 130
           MSVLFICSGIAIICSLSIA+LFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTI
Sbjct: 1   MSVLFICSGIAIICSLSIALLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTI 60

Query: 131 MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRT 190
           MYKKENKSEETNITSECALCLSPYED ECIRELLACNHVFHASCID+WLYSHSNCPLCRT
Sbjct: 61  MYKKENKSEETNITSECALCLSPYEDGECIRELLACNHVFHASCIDIWLYSHSNCPLCRT 120

Query: 191 PLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV 234
           PLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV
Sbjct: 121 PLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV 163

[Close]
BLAST of CSPI07G22610 vs. TrEMBL
Match: A0A067L9H5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24713 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.7e-16
Identity = 61/153 (39.87%), Postives = 88/153 (57.52%), Query Frame = 1 

Query: 71  MSVLFICSGIAIICSLSIAVLFFNLTMI-LGWFNCCCRSPEMTNVKNIKYEDS-NLMKIS 130
           MS+L    G+ ++ +++IA   + L M+           P +T+    K   S NL   S
Sbjct: 1   MSILLY--GLVLLGTIAIAFAVYALVMLRFQTSRHLLSQPGLTSPAEPKDSVSLNLSSYS 60

Query: 131 --TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCP 190
             T  YKKE+++ E    +EC +CLS +EDEE +R L  C H FHA CID+WLYSHS+CP
Sbjct: 61  ASTFKYKKESENPEAPPETECVVCLSTFEDEEYVRRLSDCRHSFHAPCIDMWLYSHSDCP 120

Query: 191 LCRTPLGRVACINGELTS-----GVVVAISNSL 215
           LCRTP+ R+   +G LT+     G+V+  S+ L
Sbjct: 121 LCRTPIHRLDSDDGGLTTENSIEGLVLDSSSEL 151

[Close]
BLAST of CSPI07G22610 vs. TrEMBL
Match: B9S5S5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0653430 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.7e-16
Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = 1 

Query: 76  ICSGIAIICSLSIAVLFFNLTMILGWFNCCCR--SPEMTNVKNIKYEDS---NLMKISTI 135
           I  G+ +  +++IA   + + M LGW     +    E++N  + K   S   N    ST 
Sbjct: 4   ILYGLVLFGTIAIAFAVYTMVM-LGWRTSHHQLSRQELSNPADHKSSVSLNLNPYSASTF 63

Query: 136 MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRT 195
            YKK  ++ E    +EC +CLS +ED+E +R+L  C H FHASCID+W+YSHS+CPLCRT
Sbjct: 64  KYKKRIENSEVPSETECIVCLSDFEDDEYVRQLPRCKHSFHASCIDMWVYSHSDCPLCRT 123

Query: 196 PLGRVACINGELT 204
           P+ R+   +  LT
Sbjct: 124 PIHRLDSESSVLT 135

[Close]
BLAST of CSPI07G22610 vs. TrEMBL
Match: W9QJW9_9ROSA (RING-H2 finger protein ATL1 OS=Morus notabilis GN=L484_027350 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.4e-14
Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 1 

Query: 128 STIMYKKE-NKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCP 187
           S+  YKKE +  E     SECA+CLS +E+ E IR+L  C H FHA CID+WL+SHS+CP
Sbjct: 81  SSFKYKKEMSAGEHGGGNSECAVCLSAFEEGEEIRKLPRCRHCFHAPCIDMWLFSHSDCP 140

Query: 188 LCRTPLGRVAC 198
           LCRTP+G   C
Sbjct: 141 LCRTPVGVRRC 151

[Close]
BLAST of CSPI07G22610 vs. TrEMBL
Match: A0A0B2QCF9_GLYSO (RING-H2 finger protein ATL54 OS=Glycine soja GN=glysoja_005905 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-13
Identity = 37/85 (43.53%), Postives = 57/85 (67.06%), Query Frame = 1 

Query: 110 EMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHV 169
           E + ++N +  + N++  S+  YKKE    + +   EC +CLS +E+ E +R+L  C H 
Sbjct: 73  ESSRIENCQRNNFNML--SSFKYKKEGIGNDGDYDYECPVCLSGFEEGEEVRKLPRCKHW 132

Query: 170 FHASCIDVWLYSHSNCPLCRTPLGR 195
           FHA CID+WLYSH +CP+CRTP+G+
Sbjct: 133 FHAPCIDMWLYSHLDCPICRTPVGQ 155

[Close]
BLAST of CSPI07G22610 vs. TAIR10
Match: AT5G43420.1 (AT5G43420.1 RING/U-box superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 1 

Query: 131 MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRT 190
           ++  E + EE   + EC++CLS ++DEE +R +  C+H+FH  CIDVWL +++NCPLCRT
Sbjct: 122 VFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRT 181

Query: 191 PLGRVAC 198
              RV+C
Sbjct: 182 ---RVSC 185

[Close]
BLAST of CSPI07G22610 vs. TAIR10
Match: AT3G03550.1 (AT3G03550.1 RING/U-box superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 1 

Query: 120 EDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWL 179
           ++S +  I+   Y+K +   E+   S+C++CLS +++ E +R L  CNH FH  CID WL
Sbjct: 135 DESLIKSITVYKYRKMDGFVES---SDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWL 194

Query: 180 YSHSNCPLCRTPLGRVACIN-GELTSGVVVAISNSL 215
            SHSNCPLCR  +   + +   +LT+  +V  +NS+
Sbjct: 195 KSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSI 227

[Close]
BLAST of CSPI07G22610 vs. TAIR10
Match: AT4G40070.1 (AT4G40070.1 RING/U-box superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1 

Query: 134 KENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLG 193
           KE+K    ++  ECA+CL+  ED E +R L  CNH+FH  CID WLYSH+ CP+CR+ L 
Sbjct: 113 KESKIGSKDL--ECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLT 172

Query: 194 RVACINGELTSGVVVA 210
             +   G+   GV +A
Sbjct: 173 AKSNKPGDEDDGVPLA 186

[Close]
BLAST of CSPI07G22610 vs. TAIR10
Match: AT5G17600.1 (AT5G17600.1 RING/U-box superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-13
Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 1 

Query: 145 SECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCR---TPLGRVACINGE 204
           S+C++CLS +E+ E +R L  CNH FH  CID WL SHSNCPLCR   T +       G+
Sbjct: 140 SDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQ 199

Query: 205 LTSGVVVAISNS 214
             S VV   SNS
Sbjct: 200 NVSVVVANQSNS 211

[Close]
BLAST of CSPI07G22610 vs. TAIR10
Match: AT5G58580.1 (AT5G58580.1 TOXICOS EN LEVADURA 63)

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-13
Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 1 

Query: 99  LGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEE 158
           LG F+    SP  T  ++ K  DS+++    +   +EN+ EE +   EC +CL  +E  +
Sbjct: 91  LGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENE-EEEDEEEECVICLGLWEAGD 150

Query: 159 CIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIET 218
             R+L  C H FH  CID+WL SHS CPLCR+P              V+ A+S+   ++ 
Sbjct: 151 FGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSP--------------VLAAVSDEENLKL 204

Query: 219 STHGSQREA 228
           + +  + EA
Sbjct: 211 AVNAVEEEA 204

[Close]
BLAST of CSPI07G22610 vs. NCBI nr
Match: gi|700190264|gb|KGN45497.1| (hypothetical protein Csa_7G450560 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 2.7e-86
Identity = 160/163 (98.16%), Postives = 162/163 (99.39%), Query Frame = 1 

Query: 71  MSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTI 130
           MSVLFICSGIAIICSLSIA+LFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTI
Sbjct: 1   MSVLFICSGIAIICSLSIALLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTI 60

Query: 131 MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRT 190
           MYKKENKSEETNITSECALCLSPYED ECIRELLACNHVFHASCID+WLYSHSNCPLCRT
Sbjct: 61  MYKKENKSEETNITSECALCLSPYEDGECIRELLACNHVFHASCIDIWLYSHSNCPLCRT 120

Query: 191 PLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV 234
           PLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV
Sbjct: 121 PLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV 163

[Close]
BLAST of CSPI07G22610 vs. NCBI nr
Match: gi|643733871|gb|KDP40714.1| (hypothetical protein JCGZ_24713 [Jatropha curcas])

HSP 1 Score: 92.4 bits (228), Expect = 1.1e-15
Identity = 61/153 (39.87%), Postives = 88/153 (57.52%), Query Frame = 1 

Query: 71  MSVLFICSGIAIICSLSIAVLFFNLTMI-LGWFNCCCRSPEMTNVKNIKYEDS-NLMKIS 130
           MS+L    G+ ++ +++IA   + L M+           P +T+    K   S NL   S
Sbjct: 1   MSILLY--GLVLLGTIAIAFAVYALVMLRFQTSRHLLSQPGLTSPAEPKDSVSLNLSSYS 60

Query: 131 --TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCP 190
             T  YKKE+++ E    +EC +CLS +EDEE +R L  C H FHA CID+WLYSHS+CP
Sbjct: 61  ASTFKYKKESENPEAPPETECVVCLSTFEDEEYVRRLSDCRHSFHAPCIDMWLYSHSDCP 120

Query: 191 LCRTPLGRVACINGELTS-----GVVVAISNSL 215
           LCRTP+ R+   +G LT+     G+V+  S+ L
Sbjct: 121 LCRTPIHRLDSDDGGLTTENSIEGLVLDSSSEL 151

[Close]
BLAST of CSPI07G22610 vs. NCBI nr
Match: gi|223539422|gb|EEF41012.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 92.4 bits (228), Expect = 1.1e-15
Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = 1 

Query: 76  ICSGIAIICSLSIAVLFFNLTMILGWFNCCCR--SPEMTNVKNIKYEDS---NLMKISTI 135
           I  G+ +  +++IA   + + M LGW     +    E++N  + K   S   N    ST 
Sbjct: 4   ILYGLVLFGTIAIAFAVYTMVM-LGWRTSHHQLSRQELSNPADHKSSVSLNLNPYSASTF 63

Query: 136 MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRT 195
            YKK  ++ E    +EC +CLS +ED+E +R+L  C H FHASCID+W+YSHS+CPLCRT
Sbjct: 64  KYKKRIENSEVPSETECIVCLSDFEDDEYVRQLPRCKHSFHASCIDMWVYSHSDCPLCRT 123

Query: 196 PLGRVACINGELT 204
           P+ R+   +  LT
Sbjct: 124 PIHRLDSESSVLT 135

[Close]
BLAST of CSPI07G22610 vs. NCBI nr
Match: gi|747092093|ref|XP_011093798.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Sesamum indicum])

HSP 1 Score: 88.2 bits (217), Expect = 2.1e-14
Identity = 35/70 (50.00%), Postives = 53/70 (75.71%), Query Frame = 1 

Query: 123 NLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSH 182
           N+  +S+  YKK+  +E+    S+C++CLS +E+ E +R+L  CNH+FHA CID+WLYSH
Sbjct: 78  NIDFVSSFKYKKDEAAEDEGYDSQCSVCLSVFEEGEEVRQLPKCNHLFHAQCIDMWLYSH 137

Query: 183 SNCPLCRTPL 193
            +CPLCR+P+
Sbjct: 138 MDCPLCRSPV 147

[Close]
BLAST of CSPI07G22610 vs. NCBI nr
Match: gi|1009143623|ref|XP_015889363.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba])

HSP 1 Score: 87.8 bits (216), Expect = 2.7e-14
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 1 

Query: 123 NLMKISTIMYKKENKSEETN------ITSECALCLSPYEDEECIRELLACNHVFHASCID 182
           NL  +S+  YKKE   +E        +  ECA+CLS +ED E +R+L  C H FHASCID
Sbjct: 85  NLELLSSFKYKKEGLGQEDEQGGGGVVDYECAVCLSVFEDGEEVRKLPGCKHSFHASCID 144

Query: 183 VWLYSHSNCPLCRTPL 193
           +WLYSHS+CPLCRTP+
Sbjct: 145 MWLYSHSDCPLCRTPV 160

The following BLAST results are available for this feature:
BLAST of CSPI07G22610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL16_ARATH1.1e-1247.76RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2 SV=1[more]
ATL51_ARATH2.5e-1238.54RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2[more]
ATL32_ARATH2.5e-1246.05RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3[more]
ATL52_ARATH3.3e-1250.00RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1[more]
ATL63_ARATH5.7e-1233.33RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1[more]
BLAST of CSPI07G22610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAX6_CUCSA1.9e-8698.16Uncharacterized protein OS=Cucumis sativus GN=Csa_7G450560 PE=4 SV=1[more]
A0A067L9H5_JATCU7.7e-1639.87Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24713 PE=4 SV=1[more]
B9S5S5_RICCO7.7e-1639.85Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0653430 PE=4 SV=1[more]
W9QJW9_9ROSA9.4e-1456.34RING-H2 finger protein ATL1 OS=Morus notabilis GN=L484_027350 PE=4 SV=1[more]
A0A0B2QCF9_GLYSO1.6e-1343.53RING-H2 finger protein ATL54 OS=Glycine soja GN=glysoja_005905 PE=4 SV=1[more]
BLAST of CSPI07G22610 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G43420.16.4e-1447.76 RING/U-box superfamily protein[more]
AT3G03550.11.4e-1338.54 RING/U-box superfamily protein[more]
AT4G40070.11.4e-1346.05 RING/U-box superfamily protein[more]
AT5G17600.11.9e-1350.00 RING/U-box superfamily protein[more]
AT5G58580.13.2e-1333.33 TOXICOS EN LEVADURA 63[more]
BLAST of CSPI07G22610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190264|gb|KGN45497.1|2.7e-8698.16hypothetical protein Csa_7G450560 [Cucumis sativus][more]
gi|643733871|gb|KDP40714.1|1.1e-1539.87hypothetical protein JCGZ_24713 [Jatropha curcas][more]
gi|223539422|gb|EEF41012.1|1.1e-1539.85conserved hypothetical protein [Ricinus communis][more]
gi|747092093|ref|XP_011093798.1|2.1e-1450.00PREDICTED: E3 ubiquitin-protein ligase RING1-like [Sesamum indicum][more]
gi|1009143623|ref|XP_015889363.1|2.7e-1453.95PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G22610.1CSPI07G22610.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 146..189
score: 3.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 147..188
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 147..189
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 145..192
score: 6.2
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 107..214
score: 3.4
NoneNo IPR availablePANTHERPTHR14155:SF93SUBFAMILY NOT NAMEDcoord: 107..214
score: 3.4
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 131..194
score: 1.89

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G22610Cla011176Watermelon (97103) v1cpiwmB599
CSPI07G22610Csa7G450560Cucumber (Chinese Long) v2cpicuB354
CSPI07G22610MELO3C015506Melon (DHL92) v3.5.1cpimeB553
CSPI07G22610Lsi06G003120Bottle gourd (USVL1VR-Ls)cpilsiB543
CSPI07G22610MELO3C015506.2Melon (DHL92) v3.6.1cpimedB538
CSPI07G22610CsaV3_1G040790Cucumber (Chinese Long) v3cpicucB381
CSPI07G22610Cla97C03G065500Watermelon (97103) v2cpiwmbB560
CSPI07G22610Cucsa.141560Cucumber (Gy14) v1cgycpiB210
CSPI07G22610CmaCh10G007510Cucurbita maxima (Rimu)cmacpiB082
CSPI07G22610CmaCh17G006970Cucurbita maxima (Rimu)cmacpiB387
CSPI07G22610CmaCh11G007180Cucurbita maxima (Rimu)cmacpiB154
CSPI07G22610CmoCh17G006730Cucurbita moschata (Rifu)cmocpiB376
CSPI07G22610CmoCh11G007330Cucurbita moschata (Rifu)cmocpiB141
CSPI07G22610Cp4.1LG04g11040Cucurbita pepo (Zucchini)cpecpiB695
CSPI07G22610Cp4.1LG12g09110Cucurbita pepo (Zucchini)cpecpiB158
CSPI07G22610CsGy1G027660Cucumber (Gy14) v2cgybcpiB045
CSPI07G22610Carg21937Silver-seed gourdcarcpiB0924
CSPI07G22610Carg09437Silver-seed gourdcarcpiB1063
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI07G22610CSPI01G28520Wild cucumber (PI 183967)cpicpiB052
The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G22610Silver-seed gourdcarcpiB0109
CSPI07G22610Silver-seed gourdcarcpiB0134
CSPI07G22610Silver-seed gourdcarcpiB0237
CSPI07G22610Silver-seed gourdcarcpiB0638
CSPI07G22610Cucumber (Chinese Long) v3cpicucB407
CSPI07G22610Cucumber (Chinese Long) v3cpicucB414
CSPI07G22610Watermelon (97103) v2cpiwmbB578
CSPI07G22610Watermelon (97103) v2cpiwmbB596
CSPI07G22610Wax gourdcpiwgoB702
CSPI07G22610Wax gourdcpiwgoB712
CSPI07G22610Wax gourdcpiwgoB725
CSPI07G22610Wild cucumber (PI 183967)cpicpiB171
CSPI07G22610Cucumber (Gy14) v1cgycpiB535
CSPI07G22610Cucurbita maxima (Rimu)cmacpiB048
CSPI07G22610Cucurbita maxima (Rimu)cmacpiB277
CSPI07G22610Cucurbita maxima (Rimu)cmacpiB494
CSPI07G22610Cucurbita maxima (Rimu)cmacpiB499
CSPI07G22610Cucurbita maxima (Rimu)cmacpiB939
CSPI07G22610Cucurbita moschata (Rifu)cmocpiB038
CSPI07G22610Cucurbita moschata (Rifu)cmocpiB076
CSPI07G22610Cucurbita moschata (Rifu)cmocpiB267
CSPI07G22610Cucurbita moschata (Rifu)cmocpiB486
CSPI07G22610Cucurbita moschata (Rifu)cmocpiB918
CSPI07G22610Cucumber (Chinese Long) v2cpicuB324
CSPI07G22610Cucumber (Chinese Long) v2cpicuB349
CSPI07G22610Melon (DHL92) v3.5.1cpimeB525
CSPI07G22610Melon (DHL92) v3.5.1cpimeB571
CSPI07G22610Watermelon (Charleston Gray)cpiwcgB553
CSPI07G22610Watermelon (Charleston Gray)cpiwcgB562
CSPI07G22610Watermelon (Charleston Gray)cpiwcgB582
CSPI07G22610Watermelon (Charleston Gray)cpiwcgB597
CSPI07G22610Watermelon (97103) v1cpiwmB585
CSPI07G22610Watermelon (97103) v1cpiwmB602
CSPI07G22610Watermelon (97103) v1cpiwmB631
CSPI07G22610Cucurbita pepo (Zucchini)cpecpiB337
CSPI07G22610Cucurbita pepo (Zucchini)cpecpiB375
CSPI07G22610Cucurbita pepo (Zucchini)cpecpiB595
CSPI07G22610Cucurbita pepo (Zucchini)cpecpiB636
CSPI07G22610Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G22610Bottle gourd (USVL1VR-Ls)cpilsiB539
CSPI07G22610Bottle gourd (USVL1VR-Ls)cpilsiB548
CSPI07G22610Melon (DHL92) v3.6.1cpimedB512
CSPI07G22610Melon (DHL92) v3.6.1cpimedB556
CSPI07G22610Cucumber (Gy14) v2cgybcpiB197
CSPI07G22610Cucumber (Gy14) v2cgybcpiB331