CSPI07G22460 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G22460
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 19046465 .. 19046902 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACACACACTTTCCAAATTCCAAATGGCTGAGTCGTCTTACGAATTAGAGGCGGAAGATGAGGCCAAATCCCTCCTCCGCTCCGGCTACCGTCGTCCCTCACGGCGCTGGATCCTTCTACGGCGGAAGAAGCTTCCGACTGCCCGTCTCGGCGGAAGAAGGCCGCCAAGAACGGCGGCGATTTGGAGGTCAATTAAAGAAATTAAAATGAGAAAGTGGGCGATGACGATGACGAATAAGGTCCGATGCAAAGACATTGCCAGCTTCAATGCTTTTCTTAGAAAGATTCTATTGGAGATTTCTTTAGCTATTCCTCTTCTTGGCGTTTCCCTCTCTATTTAACTATATACCTCTTTTTTATGTAGTACTCATCATCTCCATCCATCCTTCCACTGAACTTGAAAGTACTGTTTGAATCTCTCTTTTTTTCTTATATAGC

mRNA sequence

ATGGCTGAGTCGTCTTACGAATTAGAGGCGGAAGATGAGGCCAAATCCCTCCTCCGCTCCGGCTACCGTCGTCCCTCACGGCGCTGGATCCTTCTACGGCGGAAGAAGCTTCCGACTGCCCGTCTCGGCGGAAGAAGGCCGCCAAGAACGGCGGCGATTTGGAGGTCAATTAAAGAAATTAAAATGAGAAAGTGGGCGATGACGATGACGAATAAGGTCCGATGCAAAGACATTGCCAGCTTCAATGCTTTTCTTAGAAAGATTCTATTGGAGATTTCTTTAGCTATTCCTCTTCTTGGCGTTTCCCTCTCTATTTAA

Coding sequence (CDS)

ATGGCTGAGTCGTCTTACGAATTAGAGGCGGAAGATGAGGCCAAATCCCTCCTCCGCTCCGGCTACCGTCGTCCCTCACGGCGCTGGATCCTTCTACGGCGGAAGAAGCTTCCGACTGCCCGTCTCGGCGGAAGAAGGCCGCCAAGAACGGCGGCGATTTGGAGGTCAATTAAAGAAATTAAAATGAGAAAGTGGGCGATGACGATGACGAATAAGGTCCGATGCAAAGACATTGCCAGCTTCAATGCTTTTCTTAGAAAGATTCTATTGGAGATTTCTTTAGCTATTCCTCTTCTTGGCGTTTCCCTCTCTATTTAA
Homology
[Close]
BLAST of CSPI07G22460 vs. TrEMBL
Match: A0A0A0KCH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G448920 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 9.1e-49
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 

Query: 1   MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI 60
           MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI
Sbjct: 1   MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI 60

Query: 61  KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI 106
           KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI
Sbjct: 61  KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI 105

[Close]
BLAST of CSPI07G22460 vs. NCBI nr
Match: gi|700190248|gb|KGN45481.1| (hypothetical protein Csa_7G448920 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 

Query: 1   MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI 60
           MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI
Sbjct: 1   MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI 60

Query: 61  KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI 106
           KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI
Sbjct: 61  KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI 105

The following BLAST results are available for this feature:
BLAST of CSPI07G22460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G22460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCH4_CUCSA9.1e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G448920 PE=4 SV=1[more]
BLAST of CSPI07G22460 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G22460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190248|gb|KGN45481.1|1.3e-48100.00hypothetical protein Csa_7G448920 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G22460.1CSPI07G22460.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G22460Cla015541Watermelon (97103) v1cpiwmB585
CSPI07G22460Csa7G448920Cucumber (Chinese Long) v2cpicuB354
CSPI07G22460MELO3C024347Melon (DHL92) v3.5.1cpimeB525
CSPI07G22460Lsi02G028930Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G22460MELO3C024347.2Melon (DHL92) v3.6.1cpimedB512
CSPI07G22460CsaV3_7G034380Cucumber (Chinese Long) v3cpicucB414
CSPI07G22460Cla97C09G163080Watermelon (97103) v2cpiwmbB596
CSPI07G22460Bhi09G000259Wax gourdcpiwgoB702
CSPI07G22460CmaCh08G008030Cucurbita maxima (Rimu)cmacpiB939
CSPI07G22460CmaCh17G006820Cucurbita maxima (Rimu)cmacpiB387
CSPI07G22460Cp4.1LG17g04110Cucurbita pepo (Zucchini)cpecpiB337
CSPI07G22460Cp4.1LG12g09240Cucurbita pepo (Zucchini)cpecpiB158
CSPI07G22460CsGy7G020740Cucumber (Gy14) v2cgybcpiB331
CSPI07G22460Carg18977Silver-seed gourdcarcpiB0805
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G22460Silver-seed gourdcarcpiB0638
CSPI07G22460Silver-seed gourdcarcpiB0924
CSPI07G22460Cucumber (Chinese Long) v3cpicucB381
CSPI07G22460Cucumber (Chinese Long) v3cpicucB407
CSPI07G22460Watermelon (97103) v2cpiwmbB560
CSPI07G22460Wax gourdcpiwgoB712
CSPI07G22460Wax gourdcpiwgoB725
CSPI07G22460Wild cucumber (PI 183967)cpicpiB052
CSPI07G22460Wild cucumber (PI 183967)cpicpiB171
CSPI07G22460Cucumber (Gy14) v1cgycpiB210
CSPI07G22460Cucumber (Gy14) v1cgycpiB535
CSPI07G22460Cucurbita maxima (Rimu)cmacpiB048
CSPI07G22460Cucurbita maxima (Rimu)cmacpiB082
CSPI07G22460Cucurbita maxima (Rimu)cmacpiB154
CSPI07G22460Cucurbita maxima (Rimu)cmacpiB494
CSPI07G22460Cucurbita maxima (Rimu)cmacpiB499
CSPI07G22460Cucurbita moschata (Rifu)cmocpiB038
CSPI07G22460Cucurbita moschata (Rifu)cmocpiB076
CSPI07G22460Cucurbita moschata (Rifu)cmocpiB141
CSPI07G22460Cucurbita moschata (Rifu)cmocpiB376
CSPI07G22460Cucurbita moschata (Rifu)cmocpiB486
CSPI07G22460Cucurbita moschata (Rifu)cmocpiB918
CSPI07G22460Cucumber (Chinese Long) v2cpicuB324
CSPI07G22460Cucumber (Chinese Long) v2cpicuB349
CSPI07G22460Melon (DHL92) v3.5.1cpimeB553
CSPI07G22460Melon (DHL92) v3.5.1cpimeB571
CSPI07G22460Watermelon (Charleston Gray)cpiwcgB553
CSPI07G22460Watermelon (Charleston Gray)cpiwcgB562
CSPI07G22460Watermelon (Charleston Gray)cpiwcgB582
CSPI07G22460Watermelon (97103) v1cpiwmB599
CSPI07G22460Watermelon (97103) v1cpiwmB631
CSPI07G22460Cucurbita pepo (Zucchini)cpecpiB375
CSPI07G22460Cucurbita pepo (Zucchini)cpecpiB595
CSPI07G22460Cucurbita pepo (Zucchini)cpecpiB695
CSPI07G22460Bottle gourd (USVL1VR-Ls)cpilsiB543
CSPI07G22460Bottle gourd (USVL1VR-Ls)cpilsiB539
CSPI07G22460Melon (DHL92) v3.6.1cpimedB538
CSPI07G22460Melon (DHL92) v3.6.1cpimedB556
CSPI07G22460Cucumber (Gy14) v2cgybcpiB045
CSPI07G22460Cucumber (Gy14) v2cgybcpiB197
CSPI07G22460Silver-seed gourdcarcpiB0109
CSPI07G22460Silver-seed gourdcarcpiB0237