CSPI07G21960 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G21960
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Description30S ribosomal protein S2, chloroplastic
LocationChr7 : 18663816 .. 18665660 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTCCTCGTTTACTTAGAGCATTCACATATAAAAGTTCAGTCACTTCATCTCACCTGGCGCAATTTCAATTCAGGAGTTCCCATATCATGGTGTCACTCTAGTAGGAATGTAGGGCAAGTAGGCCACCAAACAATTCATCACGCCATTACTTTATTTTTCCATTTAACATTCCCATAATCATCACGACCACATCATACTTGGCCAGCAATCAATTCATGGTGAAGTATTCGCATTGAGGGCTTGTTTGGATTAACTTTCCAAGTGCTTAAAATATATTTTTTGTCCACTTAGAAAGTCAATCCAAACGGATCCAAGACCATTTCTTAAGCATGGAAATACATAGTGGCATTTACATACAGGATTGAAGTATGAATTGACCAGGCTACTATCCATTTGAGGTCCAGTTTCAGGTGCTATCTGAAGTTTCTTTTCCCAGCATTCAGGAAGGCTTCAAATGCATGGAGGTGAATTGAACATTGATTAAGGGCGGAAGTGGAGAAGCGTTTAATCCCCCCCTCCCCCAAAAACATAATTACTTGAACTGAAGCAACAACAGCACAAAATTATACAGGCCACAGGACTATGATTCAAAGAACCAGTTCGAGCCATCTACTCGTCATTGGCGAGTTTGCTGGATGTATCCAACTCGCTACAAAACTTGAGTGTGCATGTTGGCTTGGCTATGGTGGGCATCATAGTGGTGGGATTGGTAGAAGTGATTTGTTTGATCAAGATATTAACTTATTCTCAATCAGGATGGCTTTGGAGTGCTTTCATGGAGTTGTCATATTTTTAAACTTCTACCTTGTTAGTGTTTTAGAACTGTTTCGTCGTTCCAATCTCCTCCTACACATAATTAAGAGTTCCTTTATGAAGTTAACGGACTTATCTATGGAAAGATGAAATGAAAATAGATGTGATTCGTTCGATGGCTTTTGTTATTGAAAATGGGAAGCTAGTGTGATGAATACGAGGGAGAAAAGCTAATTGATAGTGGAAGAGGGAAAACTTGCACATTTAAAATGCGATTAAGAAGAGGGAAAGTGATTTGCACAATATTGAAAGTGCTCAATTGTACATGTTAAAAGTGTTTTAAATTGAGATAGGGGAGTCGATGTTCAAATATTAGTAGTCTTTTCCATGGGATGGAATTGCAACGTTTGGAAGAAAGTTTGAAATTGAAATAGATAAGTTTTATTCAAATATCATTTGTTTATTTATTTTATTATTATTCCTTTGAAATATGACATTGTTTTGGTTTTGATTTATTTTGATTTTTTGTAATTTTAAAATATTTATTTTGGTTATTACACTTAGATTCATTTTCATTTTAATCTTTTAACGTAAGAAAAACCATCCTTTTGATCTTTGAAAAATATAATAAATACAAAAAGTTGTAAATAATCACTAAGGGGCGTTTGGGACGTGAAGTTGGTTATTATAATTTGTCAGTTTGTGGGTTATTATAGTCGTGTCTGAATGATTACAGTTTGGGAAAGTTAGAAATAGTGTAAGGGCTAGTGAGGAATAGTGAAAGAGAATGAGAAATAGTAACAAATGAAAAATATTTATAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAACTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGTGGATTCAGTAGCCCGGGCTGCAACAAGGACTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAAATGGAAATAG

mRNA sequence

ATGGATTTCCTCGTTTACTTAGAGCATTCACATATAAAAGTTCAGTCACTTCATCTCACCTGGCGCAATTTCAATTCAGGAGTTCCCATATCATGGTGTCACTCTAGTAGGAATGTAGGGCAAGCTACTATCCATTTGAGGTCCAGTTTCAGGTGCTATCTGAAGTTTCTTTTCCCAGCATTCAGGAAGGCTTCAAATGCATGGAGGACTATGATTCAAAGAACCAGTTCGAGCCATCTACTCGTCATTGGCGAGTTTGCTGGATGTATCCAACTCGCTACAAAACTTGAGTGTGCATGTTGGCTTGGCTATGGTGGGCATCATAGTGGTGGGATTGAAGCTTGTGATTTAGTTTTTGATGCAGCAACTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGTGGATTCAGTAGCCCGGGCTGCAACAAGGACTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAAATGGAAATAG

Coding sequence (CDS)

ATGGATTTCCTCGTTTACTTAGAGCATTCACATATAAAAGTTCAGTCACTTCATCTCACCTGGCGCAATTTCAATTCAGGAGTTCCCATATCATGGTGTCACTCTAGTAGGAATGTAGGGCAAGCTACTATCCATTTGAGGTCCAGTTTCAGGTGCTATCTGAAGTTTCTTTTCCCAGCATTCAGGAAGGCTTCAAATGCATGGAGGACTATGATTCAAAGAACCAGTTCGAGCCATCTACTCGTCATTGGCGAGTTTGCTGGATGTATCCAACTCGCTACAAAACTTGAGTGTGCATGTTGGCTTGGCTATGGTGGGCATCATAGTGGTGGGATTGAAGCTTGTGATTTAGTTTTTGATGCAGCAACTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGTGGATTCAGTAGCCCGGGCTGCAACAAGGACTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAAATGGAAATAG
Homology
[Close]
BLAST of CSPI07G21960 vs. Swiss-Prot
Match: RR2_CUCSA (30S ribosomal protein S2, chloroplastic OS=Cucumis sativus GN=rps2 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.9e-37
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAATRGKQFLIVGTKNKAADSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. Swiss-Prot
Match: RR2_GOSHI (30S ribosomal protein S2, chloroplastic OS=Gossypium hirsutum GN=rps2 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.6e-35
Identity = 69/75 (92.00%), Postives = 71/75 (94.67%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA++GKQFLIVGTKNKA DSVARAA R RCHYVNKKWLGGMLTNW TTETRL
Sbjct: 56  EACDLVFDAASKGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWPTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. Swiss-Prot
Match: RR2_CARPA (30S ribosomal protein S2, chloroplastic OS=Carica papaya GN=rps2 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.6e-35
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA+RGKQFLIVGTKNKA DSVARAA R RCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAASRGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTG L
Sbjct: 116 HKFRDLRTEQKTGRL 130

[Close]
BLAST of CSPI07G21960 vs. Swiss-Prot
Match: RR2_GOSBA (30S ribosomal protein S2, chloroplastic OS=Gossypium barbadense GN=rps2 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.6e-35
Identity = 69/75 (92.00%), Postives = 71/75 (94.67%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA++GKQFLIVGTKNKA DSVARAA R RCHYVNKKWLGGMLTNW TTETRL
Sbjct: 56  EACDLVFDAASKGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWPTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. Swiss-Prot
Match: RR2_LACSA (30S ribosomal protein S2, chloroplastic OS=Lactuca sativa GN=rps2 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.3e-34
Identity = 69/75 (92.00%), Postives = 70/75 (93.33%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA+RGKQFLIVGTKNK  DSVA AA R RCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAASRGKQFLIVGTKNKEADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. TrEMBL
Match: W8E120_9ROSI (Ribosomal protein S2 OS=Cucumis hystrix GN=rps2 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.1e-35
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAATRGKQFLIVGTKNKAADSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. TrEMBL
Match: G3ETX4_CUCME (30S ribosomal protein S2, chloroplastic OS=Cucumis melo subsp. melo GN=rps2 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.1e-35
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAATRGKQFLIVGTKNKAADSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. TrEMBL
Match: A0A0S2IFZ7_CUCMO (Ribosomal protein S2 OS=Cucurbita moschata GN=rps2 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA+RGKQFLIVGTKNKA DSVARAATR RCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. TrEMBL
Match: X2F289_LAGSI (Ribosomal protein S2 (Fragment) OS=Lagenaria siceraria GN=rps2 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA+RGKQFLIVGTKNKA DSVARAATR RCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. TrEMBL
Match: A0A0S2IG98_9ROSI (Ribosomal protein S2 OS=Cucurbita andreana GN=rps2 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA+RGKQFLIVGTKNKA DSVARAATR RCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. TAIR10
Match: ATCG00160.1 (ATCG00160.1 ribosomal protein S2)

HSP 1 Score: 141.0 bits (354), Expect = 7.8e-34
Identity = 66/74 (89.19%), Postives = 68/74 (91.89%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA+RGKQFLIVGTKNKA D V+RAA R RCHYVNKKWLGGMLTNWSTTE RL
Sbjct: 56  EACDLVFDAASRGKQFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRL 115

Query: 173 HKFRDLRTEQKTGG 187
           HKFRDLRTEQKT G
Sbjct: 116 HKFRDLRTEQKTEG 129

[Close]
BLAST of CSPI07G21960 vs. NCBI nr
Match: gi|68164792|ref|YP_247588.1| (ribosomal protein S2 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-35
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAATRGKQFLIVGTKNKAADSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. NCBI nr
Match: gi|346578180|ref|YP_004841772.1| (ribosomal protein S2 [Cucumis melo subsp. melo])

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-35
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAATRGKQFLIVGTKNKA DSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAATRGKQFLIVGTKNKAADSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. NCBI nr
Match: gi|1002166186|ref|YP_009236269.1| (ribosomal protein S2 (chloroplast) [Gynostemma pentaphyllum])

HSP 1 Score: 153.7 bits (387), Expect = 3.3e-34
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA+RGKQFLIVGTKNKA DSVARAATR RCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. NCBI nr
Match: gi|952954376|gb|ALO21740.1| (ribosomal protein S2 (plastid) [Cucurbita argyrosperma])

HSP 1 Score: 153.7 bits (387), Expect = 3.3e-34
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA+RGKQFLIVGTKNKA DSVARAATR RCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

[Close]
BLAST of CSPI07G21960 vs. NCBI nr
Match: gi|595645299|gb|AHM88761.1| (ribosomal protein S2, partial (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 153.7 bits (387), Expect = 3.3e-34
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 1 

Query: 113 EACDLVFDAATRGKQFLIVGTKNKAVDSVARAATRTRCHYVNKKWLGGMLTNWSTTETRL 172
           EACDLVFDAA+RGKQFLIVGTKNKA DSVARAATR RCHYVNKKWLGGMLTNWSTTETRL
Sbjct: 56  EACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRL 115

Query: 173 HKFRDLRTEQKTGGL 188
           HKFRDLRTEQKTGGL
Sbjct: 116 HKFRDLRTEQKTGGL 130

The following BLAST results are available for this feature:
BLAST of CSPI07G21960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RR2_CUCSA1.9e-3798.6730S ribosomal protein S2, chloroplastic OS=Cucumis sativus GN=rps2 PE=3 SV=1[more]
RR2_GOSHI8.6e-3592.0030S ribosomal protein S2, chloroplastic OS=Gossypium hirsutum GN=rps2 PE=3 SV=1[more]
RR2_CARPA8.6e-3593.3330S ribosomal protein S2, chloroplastic OS=Carica papaya GN=rps2 PE=3 SV=1[more]
RR2_GOSBA8.6e-3592.0030S ribosomal protein S2, chloroplastic OS=Gossypium barbadense GN=rps2 PE=3 SV=... [more]
RR2_LACSA3.3e-3492.0030S ribosomal protein S2, chloroplastic OS=Lactuca sativa GN=rps2 PE=3 SV=1[more]
BLAST of CSPI07G21960 vs. TrEMBL
Match NameE-valueIdentityDescription
W8E120_9ROSI2.1e-3598.67Ribosomal protein S2 OS=Cucumis hystrix GN=rps2 PE=3 SV=1[more]
G3ETX4_CUCME2.1e-3598.6730S ribosomal protein S2, chloroplastic OS=Cucumis melo subsp. melo GN=rps2 PE=3... [more]
A0A0S2IFZ7_CUCMO2.3e-3496.00Ribosomal protein S2 OS=Cucurbita moschata GN=rps2 PE=3 SV=1[more]
X2F289_LAGSI2.3e-3496.00Ribosomal protein S2 (Fragment) OS=Lagenaria siceraria GN=rps2 PE=3 SV=1[more]
A0A0S2IG98_9ROSI2.3e-3496.00Ribosomal protein S2 OS=Cucurbita andreana GN=rps2 PE=3 SV=1[more]
BLAST of CSPI07G21960 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00160.17.8e-3489.19ATCG00160.1 ribosomal protein S2[more]
BLAST of CSPI07G21960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|68164792|ref|YP_247588.1|3.0e-3598.67ribosomal protein S2 [Cucumis sativus][more]
gi|346578180|ref|YP_004841772.1|3.0e-3598.67ribosomal protein S2 [Cucumis melo subsp. melo][more]
gi|1002166186|ref|YP_009236269.1|3.3e-3496.00ribosomal protein S2 (chloroplast) [Gynostemma pentaphyllum][more]
gi|952954376|gb|ALO21740.1|3.3e-3496.00ribosomal protein S2 (plastid) [Cucurbita argyrosperma][more]
gi|595645299|gb|AHM88761.1|3.3e-3496.00ribosomal protein S2, partial (chloroplast) [Lagenaria siceraria][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001865Ribosomal_S2
IPR005706Ribosomal_S2_bac/mit/plastid
IPR023591Ribosomal_S2_flav_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G21960.1CSPI07G21960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 113..185
score: 2.8
IPR005706Ribosomal protein S2, bacteria/mitochondria/plastidPANTHERPTHR1253430S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLARcoord: 112..187
score: 6.2
IPR023591Ribosomal protein S2, flavodoxin-like domainunknownSSF52313Ribosomal protein S2coord: 113..187
score: 8.5
NoneNo IPR availableGENE3DG3DSA:1.10.287.610coord: 161..187
score: 2.4
NoneNo IPR availableGENE3DG3DSA:3.40.50.10490coord: 113..160
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G21960Cucumber (Chinese Long) v3cpicucB414
CSPI07G21960Watermelon (97103) v2cpiwmbB596
CSPI07G21960Wax gourdcpiwgoB702
CSPI07G21960Cucumber (Gy14) v1cgycpiB535
CSPI07G21960Cucurbita maxima (Rimu)cmacpiB387
CSPI07G21960Cucurbita maxima (Rimu)cmacpiB939
CSPI07G21960Cucurbita moschata (Rifu)cmocpiB376
CSPI07G21960Cucurbita moschata (Rifu)cmocpiB918
CSPI07G21960Cucumber (Chinese Long) v2cpicuB354
CSPI07G21960Melon (DHL92) v3.5.1cpimeB525
CSPI07G21960Watermelon (Charleston Gray)cpiwcgB553
CSPI07G21960Watermelon (97103) v1cpiwmB585
CSPI07G21960Cucurbita pepo (Zucchini)cpecpiB158
CSPI07G21960Cucurbita pepo (Zucchini)cpecpiB337
CSPI07G21960Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G21960Melon (DHL92) v3.6.1cpimedB512
CSPI07G21960Cucumber (Gy14) v2cgybcpiB331
CSPI07G21960Silver-seed gourdcarcpiB0638
CSPI07G21960Silver-seed gourdcarcpiB0805