CSPI07G20300 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G20300
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionPentatricopeptide repeat-containing family protein
LocationChr7 : 17661850 .. 17662476 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAGAAGGGTGTTCGTAAGGATTTGCAATCGTACTTGTTATATATGGATATACAATGCAAAACTGGGAAGTCTTGGGAGGCTGTTAAATTGTACATGGAGATGAAAAATAAGGGAATGAAATTGGATGTTGTGGCCTATAATACAGCGATTCATGCAGTTGGGATTTCGGAAGATGTCGATTTCACCAACAGAGTGTTTCATGAGATGAAGGGAATGGGGTGTAAGCCTAACGTTGTGACTTGCAATACTATTATTAAGCTATTTTGTGAGAATGGAAGATTCAAGGATGCTCATGTGATTCTCGACCAAATGCTCAAATACTGTCCACCGAATGTTATCACCTATCATTGTTTTTTCAGGTCTCTTGAAAAGCTGAAAGAGATTCTCATGTTATCGACAGGATGATTAAACTTGGGGTTTATCCAAAAATGGATGCTGATGTGATGCTCATGAGTAAGTTTGGAAGGGGAGAGACAAATAGAGCACACAAGAACACATTGTTAAACATCTGGCAAACATGATTAACACGATATTACTAGTTAAGCTTTAATTTTGAATGTTGAAGTTTGTTCTTTTTTTTTAAAAAAAATAAAATTCATTCAGATTAGAGATATCATTGGC

mRNA sequence

ATGGGTAAGAAGGGTGTTCGTAAGGATTTGCAATCGTACTTGTTATATATGGATATACAATGCAAAACTGGGAAGTCTTGGGAGGCTGTTAAATTGTACATGGAGATGAAAAATAAGGGAATGAAATTGGATGTTGTGGCCTATAATACAGCGATTCATGCAGTTGGGATTTCGGAAGATGTCGATTTCACCAACAGAGTGTTTCATGAGATGAAGGGAATGGGGTGTAAGCCTAACGTTGTGACTTGCAATACTATTATTAAGCTATTTTGTGAGAATGGAAGATTCAAGGATGCTCATGTGATTCTCGACCAAATGCTCAAATACTGTCCACCGAATGTTATCACCTATCATTGTTTTTTCAGGTCTCTTGAAAAGCTGAAAGAGATTCTCATGTTATCGACAGGATGA

Coding sequence (CDS)

ATGGGTAAGAAGGGTGTTCGTAAGGATTTGCAATCGTACTTGTTATATATGGATATACAATGCAAAACTGGGAAGTCTTGGGAGGCTGTTAAATTGTACATGGAGATGAAAAATAAGGGAATGAAATTGGATGTTGTGGCCTATAATACAGCGATTCATGCAGTTGGGATTTCGGAAGATGTCGATTTCACCAACAGAGTGTTTCATGAGATGAAGGGAATGGGGTGTAAGCCTAACGTTGTGACTTGCAATACTATTATTAAGCTATTTTGTGAGAATGGAAGATTCAAGGATGCTCATGTGATTCTCGACCAAATGCTCAAATACTGTCCACCGAATGTTATCACCTATCATTGTTTTTTCAGGTCTCTTGAAAAGCTGAAAGAGATTCTCATGTTATCGACAGGATGA
Homology
[Close]
BLAST of CSPI07G20300 vs. Swiss-Prot
Match: PP136_ARATH (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana GN=At1g80550 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.9e-40
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M  +GV KDL SY +YMDI CK+GK W+AVKLY EMK++ MKLDVVAYNT I A+G S+ 
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 274

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
           V+F  RVF EM+  GC+PNV T NTIIKL CE+GR +DA+ +LD+M K  C P+ ITY C
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334

Query: 121 FFRSLEKLKEILML 134
            F  LEK  EIL L
Sbjct: 335 LFSRLEKPSEILSL 348

[Close]
BLAST of CSPI07G20300 vs. Swiss-Prot
Match: PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 4.2e-15
Identity = 45/131 (34.35%), Postives = 68/131 (51.91%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M  KG++ D+ +Y   +D+ CK  +  +A KL  +M+ +    DV+ Y T I  +G+   
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
            D    V  EMK  GC P+V   N  I+ FC   R  DA  ++D+M+K    PN  TY+ 
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356

Query: 121 FFRSLEKLKEI 131
           FFR L    ++
Sbjct: 357 FFRVLSLANDL 367

[Close]
BLAST of CSPI07G20300 vs. Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-14
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 1 

Query: 5   GVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFT 64
           G+  D  +Y + M    K G+  EA+KL  EM   G + DV+  N+ I+ +  ++ VD  
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557

Query: 65  NRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQML-KYCPPNVITYHCFFRS 124
            ++F  MK M  KP VVT NT++    +NG+ ++A  + + M+ K CPPN IT++  F  
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617

Query: 125 LEKLKEILM 133
           L K  E+ +
Sbjct: 618 LCKNDEVTL 626

[Close]
BLAST of CSPI07G20300 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.6e-14
Identity = 46/137 (33.58%), Postives = 73/137 (53.28%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M   G    + +Y   ++  C TGK  +A+ +  +MK KG+  DVV+Y+T +     S D
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITY-- 120
           VD   RV  EM   G KP+ +T +++I+ FCE  R K+A  + ++ML+   PP+  TY  
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525

Query: 121 ----HCFFRSLEKLKEI 131
               +C    LEK  ++
Sbjct: 526 LINAYCMEGDLEKALQL 542

[Close]
BLAST of CSPI07G20300 vs. Swiss-Prot
Match: PPR78_ARATH (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.1e-13
Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 1 

Query: 9   DLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVF 68
           DL +Y   +D  CK+G      K++ EM N G+K D  ++   IHA   + DV    +V 
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301

Query: 69  HEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLK-------YCPPNVITYHCFF 128
             MK     PNV T N IIK  C+N +  DA+++LD+M++       +   +++ YHC  
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361

Query: 129 RSLEKLKEIL 132
             + +  ++L
Sbjct: 362 CEVNRATKLL 371

[Close]
BLAST of CSPI07G20300 vs. TrEMBL
Match: A0A0A0K6U8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432190 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.3e-75
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED
Sbjct: 141 MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 200

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF 120
           VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF
Sbjct: 201 VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF 260

Query: 121 FRSLEKLKEILMLSTG 137
           FRSLEKLKEILMLSTG
Sbjct: 261 FRSLEKLKEILMLSTG 276

[Close]
BLAST of CSPI07G20300 vs. TrEMBL
Match: A0A0A0KBR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432170 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.3e-59
Identity = 112/134 (83.58%), Postives = 120/134 (89.55%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M KKGVRKDL SY +YMDIQCK+GK W+AVKLY EMK KGMKLDVVAYNT IHAVGISE 
Sbjct: 213 MDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEG 272

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
           VDF +RVFHEMK MGCKPNVVTCNT+IKLFCENGRFKDAH++LDQMLK  C PNVITYHC
Sbjct: 273 VDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHC 332

Query: 121 FFRSLEKLKEILML 134
           FFRSLEK KEIL+L
Sbjct: 333 FFRSLEKPKEILVL 346

[Close]
BLAST of CSPI07G20300 vs. TrEMBL
Match: A0A061G8S5_THECC (Pentatricopeptide repeat (PPR) superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_027343 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.2e-46
Identity = 92/134 (68.66%), Postives = 106/134 (79.10%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M KKGV+KDL SY +YMDI CK+GK W+AVKLY EMK KGMKLDVVAYNT I A+GISE 
Sbjct: 129 MDKKGVKKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIRAIGISEG 188

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
            DF   VF EM+ +GC+PNVVT NT+IKL CENGR + A+ +LDQMLK  C P+VITYHC
Sbjct: 189 ADFGVGVFREMRDLGCEPNVVTYNTVIKLLCENGRVRQAYAVLDQMLKKDCAPDVITYHC 248

Query: 121 FFRSLEKLKEILML 134
           FF  LEK +EIL L
Sbjct: 249 FFGCLEKPREILKL 262

[Close]
BLAST of CSPI07G20300 vs. TrEMBL
Match: A0A061G7W5_THECC (Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_027343 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.2e-46
Identity = 92/134 (68.66%), Postives = 106/134 (79.10%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M KKGV+KDL SY +YMDI CK+GK W+AVKLY EMK KGMKLDVVAYNT I A+GISE 
Sbjct: 109 MDKKGVKKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIRAIGISEG 168

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
            DF   VF EM+ +GC+PNVVT NT+IKL CENGR + A+ +LDQMLK  C P+VITYHC
Sbjct: 169 ADFGVGVFREMRDLGCEPNVVTYNTVIKLLCENGRVRQAYAVLDQMLKKDCAPDVITYHC 228

Query: 121 FFRSLEKLKEILML 134
           FF  LEK +EIL L
Sbjct: 229 FFGCLEKPREILKL 242

[Close]
BLAST of CSPI07G20300 vs. TrEMBL
Match: A0A061GFZ8_THECC (Pentatricopeptide repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_027343 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.2e-46
Identity = 92/134 (68.66%), Postives = 106/134 (79.10%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M KKGV+KDL SY +YMDI CK+GK W+AVKLY EMK KGMKLDVVAYNT I A+GISE 
Sbjct: 222 MDKKGVKKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIRAIGISEG 281

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
            DF   VF EM+ +GC+PNVVT NT+IKL CENGR + A+ +LDQMLK  C P+VITYHC
Sbjct: 282 ADFGVGVFREMRDLGCEPNVVTYNTVIKLLCENGRVRQAYAVLDQMLKKDCAPDVITYHC 341

Query: 121 FFRSLEKLKEILML 134
           FF  LEK +EIL L
Sbjct: 342 FFGCLEKPREILKL 355

[Close]
BLAST of CSPI07G20300 vs. TAIR10
Match: AT1G80550.1 (AT1G80550.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-41
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M  +GV KDL SY +YMDI CK+GK W+AVKLY EMK++ MKLDVVAYNT I A+G S+ 
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 274

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
           V+F  RVF EM+  GC+PNV T NTIIKL CE+GR +DA+ +LD+M K  C P+ ITY C
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334

Query: 121 FFRSLEKLKEILML 134
            F  LEK  EIL L
Sbjct: 335 LFSRLEKPSEILSL 348

[Close]
BLAST of CSPI07G20300 vs. TAIR10
Match: AT1G02420.1 (AT1G02420.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-16
Identity = 45/131 (34.35%), Postives = 68/131 (51.91%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M  KG++ D+ +Y   +D+ CK  +  +A KL  +M+ +    DV+ Y T I  +G+   
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
            D    V  EMK  GC P+V   N  I+ FC   R  DA  ++D+M+K    PN  TY+ 
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356

Query: 121 FFRSLEKLKEI 131
           FFR L    ++
Sbjct: 357 FFRVLSLANDL 367

[Close]
BLAST of CSPI07G20300 vs. TAIR10
Match: AT4G31850.1 (AT4G31850.1 proton gradient regulation 3)

HSP 1 Score: 79.7 bits (195), Expect = 1.5e-15
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 1 

Query: 5   GVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFT 64
           G+  D  +Y + M    K G+  EA+KL  EM   G + DV+  N+ I+ +  ++ VD  
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557

Query: 65  NRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQML-KYCPPNVITYHCFFRS 124
            ++F  MK M  KP VVT NT++    +NG+ ++A  + + M+ K CPPN IT++  F  
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617

Query: 125 LEKLKEILM 133
           L K  E+ +
Sbjct: 618 LCKNDEVTL 626

[Close]
BLAST of CSPI07G20300 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 2.6e-15
Identity = 46/137 (33.58%), Postives = 73/137 (53.28%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M   G    + +Y   ++  C TGK  +A+ +  +MK KG+  DVV+Y+T +     S D
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITY-- 120
           VD   RV  EM   G KP+ +T +++I+ FCE  R K+A  + ++ML+   PP+  TY  
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525

Query: 121 ----HCFFRSLEKLKEI 131
               +C    LEK  ++
Sbjct: 526 LINAYCMEGDLEKALQL 542

[Close]
BLAST of CSPI07G20300 vs. TAIR10
Match: AT1G52640.1 (AT1G52640.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-14
Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 1 

Query: 9   DLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVF 68
           DL +Y   +D  CK+G      K++ EM N G+K D  ++   IHA   + DV    +V 
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301

Query: 69  HEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLK-------YCPPNVITYHCFF 128
             MK     PNV T N IIK  C+N +  DA+++LD+M++       +   +++ YHC  
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361

Query: 129 RSLEKLKEIL 132
             + +  ++L
Sbjct: 362 CEVNRATKLL 371

[Close]
BLAST of CSPI07G20300 vs. NCBI nr
Match: gi|778730467|ref|XP_011659789.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 6.1e-75
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED
Sbjct: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF 120
           VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF
Sbjct: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF 120

Query: 121 FRSLEKLKEILMLSTG 137
           FRSLEKLKEILMLSTG
Sbjct: 121 FRSLEKLKEILMLSTG 136

[Close]
BLAST of CSPI07G20300 vs. NCBI nr
Match: gi|700190005|gb|KGN45238.1| (hypothetical protein Csa_7G432190 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 6.1e-75
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED
Sbjct: 141 MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 200

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF 120
           VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF
Sbjct: 201 VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF 260

Query: 121 FRSLEKLKEILMLSTG 137
           FRSLEKLKEILMLSTG
Sbjct: 261 FRSLEKLKEILMLSTG 276

[Close]
BLAST of CSPI07G20300 vs. NCBI nr
Match: gi|778728988|ref|XP_011659515.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucumis sativus])

HSP 1 Score: 235.3 bits (599), Expect = 6.2e-59
Identity = 112/134 (83.58%), Postives = 120/134 (89.55%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M KKGVRKDL SY +YMDIQCK+GK W+AVKLY EMK KGMKLDVVAYNT IHAVGISE 
Sbjct: 213 MDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEG 272

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
           VDF +RVFHEMK MGCKPNVVTCNT+IKLFCENGRFKDAH++LDQMLK  C PNVITYHC
Sbjct: 273 VDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHC 332

Query: 121 FFRSLEKLKEILML 134
           FFRSLEK KEIL+L
Sbjct: 333 FFRSLEKPKEILVL 346

[Close]
BLAST of CSPI07G20300 vs. NCBI nr
Match: gi|659122453|ref|XP_008461152.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 6.2e-59
Identity = 112/134 (83.58%), Postives = 120/134 (89.55%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M KKGVRKDL SY +YMDIQCK+GK W+AVKLY EMK KGMKLDVVAYNT IHAVGISE 
Sbjct: 213 MDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKQKGMKLDVVAYNTVIHAVGISEG 272

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
           VDF +RVFHEMK MGCKPNVVTCNT+IKLFCENGRFKDAH++LDQMLK  C PNVITYHC
Sbjct: 273 VDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHC 332

Query: 121 FFRSLEKLKEILML 134
           FFRSLEK KEIL+L
Sbjct: 333 FFRSLEKPKEILIL 346

[Close]
BLAST of CSPI07G20300 vs. NCBI nr
Match: gi|590615881|ref|XP_007023349.1| (Pentatricopeptide repeat (PPR) superfamily protein isoform 3 [Theobroma cacao])

HSP 1 Score: 192.6 bits (488), Expect = 4.6e-46
Identity = 92/134 (68.66%), Postives = 106/134 (79.10%), Query Frame = 1 

Query: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60
           M KKGV+KDL SY +YMDI CK+GK W+AVKLY EMK KGMKLDVVAYNT I A+GISE 
Sbjct: 129 MDKKGVKKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIRAIGISEG 188

Query: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKY-CPPNVITYHC 120
            DF   VF EM+ +GC+PNVVT NT+IKL CENGR + A+ +LDQMLK  C P+VITYHC
Sbjct: 189 ADFGVGVFREMRDLGCEPNVVTYNTVIKLLCENGRVRQAYAVLDQMLKKDCAPDVITYHC 248

Query: 121 FFRSLEKLKEILML 134
           FF  LEK +EIL L
Sbjct: 249 FFGCLEKPREILKL 262

The following BLAST results are available for this feature:
BLAST of CSPI07G20300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP136_ARATH4.9e-4061.19Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidop... [more]
PPR5_ARATH4.2e-1534.35Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th... [more]
PP344_ARATH2.7e-1434.88Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... [more]
PP407_ARATH4.6e-1433.58Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PPR78_ARATH5.1e-1331.54Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop... [more]
BLAST of CSPI07G20300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6U8_CUCSA4.3e-75100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432190 PE=4 SV=1[more]
A0A0A0KBR1_CUCSA4.3e-5983.58Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432170 PE=4 SV=1[more]
A0A061G8S5_THECC3.2e-4668.66Pentatricopeptide repeat (PPR) superfamily protein isoform 3 OS=Theobroma cacao ... [more]
A0A061G7W5_THECC3.2e-4668.66Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Theobroma cacao ... [more]
A0A061GFZ8_THECC3.2e-4668.66Pentatricopeptide repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM... [more]
BLAST of CSPI07G20300 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80550.12.8e-4161.19 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G02420.12.4e-1634.35 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G31850.11.5e-1534.88 proton gradient regulation 3[more]
AT5G39710.12.6e-1533.58 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G52640.12.9e-1431.54 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CSPI07G20300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730467|ref|XP_011659789.1|6.1e-75100.00PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial-... [more]
gi|700190005|gb|KGN45238.1|6.1e-75100.00hypothetical protein Csa_7G432190 [Cucumis sativus][more]
gi|778728988|ref|XP_011659515.1|6.2e-5983.58PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial ... [more]
gi|659122453|ref|XP_008461152.1|6.2e-5983.58PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial ... [more]
gi|590615881|ref|XP_007023349.1|4.6e-4668.66Pentatricopeptide repeat (PPR) superfamily protein isoform 3 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G20300.1CSPI07G20300.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 32..92
score: 1.2
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 81..108
score: 4.0E-7coord: 46..80
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 79..109
score: 9.942coord: 9..43
score: 9.186coord: 44..78
score: 10
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..133
score: 1.6
NoneNo IPR availablePANTHERPTHR24015:SF812SUBFAMILY NOT NAMEDcoord: 1..133
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G20300Cla015339Watermelon (97103) v1cpiwmB585
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G20300Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G20300Cucurbita pepo (Zucchini)cpecpiB344
CSPI07G20300Bottle gourd (USVL1VR-Ls)cpilsiB513
CSPI07G20300Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G20300Bottle gourd (USVL1VR-Ls)cpilsiB538
CSPI07G20300Bottle gourd (USVL1VR-Ls)cpilsiB546
CSPI07G20300Bottle gourd (USVL1VR-Ls)cpilsiB551
CSPI07G20300Melon (DHL92) v3.6.1cpimedB559
CSPI07G20300Melon (DHL92) v3.6.1cpimedB512
CSPI07G20300Melon (DHL92) v3.6.1cpimedB540
CSPI07G20300Melon (DHL92) v3.6.1cpimedB555
CSPI07G20300Cucumber (Gy14) v2cgybcpiB094
CSPI07G20300Cucumber (Gy14) v2cgybcpiB195
CSPI07G20300Cucumber (Gy14) v2cgybcpiB331
CSPI07G20300Silver-seed gourdcarcpiB0166
CSPI07G20300Silver-seed gourdcarcpiB0236
CSPI07G20300Silver-seed gourdcarcpiB0606
CSPI07G20300Silver-seed gourdcarcpiB1064
CSPI07G20300Cucumber (Chinese Long) v3cpicucB391
CSPI07G20300Cucumber (Chinese Long) v3cpicucB403
CSPI07G20300Cucumber (Chinese Long) v3cpicucB406
CSPI07G20300Cucumber (Chinese Long) v3cpicucB414
CSPI07G20300Watermelon (97103) v2cpiwmbB565
CSPI07G20300Watermelon (97103) v2cpiwmbB583
CSPI07G20300Watermelon (97103) v2cpiwmbB596
CSPI07G20300Wax gourdcpiwgoB716
CSPI07G20300Wax gourdcpiwgoB690
CSPI07G20300Cucurbita maxima (Rimu)cmacpiB934
CSPI07G20300Wild cucumber (PI 183967)cpicpiB096
CSPI07G20300Wild cucumber (PI 183967)cpicpiB098
CSPI07G20300Wild cucumber (PI 183967)cpicpiB168
CSPI07G20300Wild cucumber (PI 183967)cpicpiB172
CSPI07G20300Cucumber (Gy14) v1cgycpiB105
CSPI07G20300Cucumber (Gy14) v1cgycpiB127
CSPI07G20300Cucumber (Gy14) v1cgycpiB251
CSPI07G20300Cucumber (Gy14) v1cgycpiB410
CSPI07G20300Cucurbita maxima (Rimu)cmacpiB279
CSPI07G20300Cucurbita maxima (Rimu)cmacpiB392
CSPI07G20300Cucurbita maxima (Rimu)cmacpiB501
CSPI07G20300Cucurbita maxima (Rimu)cmacpiB822
CSPI07G20300Cucurbita moschata (Rifu)cmocpiB268
CSPI07G20300Cucurbita moschata (Rifu)cmocpiB381
CSPI07G20300Cucurbita moschata (Rifu)cmocpiB808
CSPI07G20300Cucurbita moschata (Rifu)cmocpiB913
CSPI07G20300Cucumber (Chinese Long) v2cpicuB335
CSPI07G20300Cucumber (Chinese Long) v2cpicuB337
CSPI07G20300Cucumber (Chinese Long) v2cpicuB348
CSPI07G20300Cucumber (Chinese Long) v2cpicuB354
CSPI07G20300Melon (DHL92) v3.5.1cpimeB525
CSPI07G20300Melon (DHL92) v3.5.1cpimeB555
CSPI07G20300Melon (DHL92) v3.5.1cpimeB570
CSPI07G20300Watermelon (Charleston Gray)cpiwcgB564
CSPI07G20300Watermelon (Charleston Gray)cpiwcgB553
CSPI07G20300Watermelon (Charleston Gray)cpiwcgB585
CSPI07G20300Watermelon (97103) v1cpiwmB605
CSPI07G20300Watermelon (97103) v1cpiwmB629