CSPI07G18800 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G18800
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	60S ribosomal protein L44
Location	Chr7 : 16708164 .. 16710266 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATGCCAAACAAAAACCTTTCCTCCCACTCTCTCCCCATTCGCTTCCATGGCCAAATCCTCAAATTCCAAATCCAAACCTCACTTTTTCCTCTGCTGTTTTGGATACTCCGACAAGCTTCCCCGCTTTAAGCCCCTCAAATCCCCCGCCGGTCACCGTAAACGTCAGTTTTCTTGGTTTAGGAACTCAAAGCCTCCTACGCCCCTTCATTCTTCCTCTTTTCCTTCCCATACGAACCGCTCCGTTACTAATTCCGACCGCCTCTCCTCGGTTTCTATTGCTCCCACTGCCACTACTAATTCCTCCAATGAAGATATAGCCGTCGCTGTGCCGGTGGCCACAAATCGAACCGGCGAGGAGGTGATCATCAGCCCGCATGAGGTATTTGAATTTTGCTTCGATATTTTTTTTTTCTTTTTTAAATTAATTTGAAAACTTACCATTAAGATTAATTTTTTGAAAAATTATTTCACATAACAAAATTACAAGAAAATATTTACAAAAAATATATAGAAATTTCGTATTATGTGAAAGATATCAAAAAAATTAGTAATTGTATTTATTGAATAAGCATGAGAGTAATCAAAGTAATGAAAAAAAAAAAGATATAGATTTGACTCCGTATTGGCATGGGTGAACTAGTCTTATTAATTTTATATAATTAGGTATGCCAGATTTAATTTATAGTAAAATATGTATATGAACAACGACAAATTGTAATCAAGTATTTTTTTTCTTTCTATTTTTGAAAATAAAAACTTTTAAAAATTTAGCCTATTAGTTTGATATCTTTAATTAAAGAAGCATTAATATGACCTATTGAAGTAATTAATGTGGTCTAGTTAGTTACATAATCTATACCAAATGAATAAATATGTTACATCAAACTTTGAATTAATAGAGGTGATTTTTTCTTTTTTTCAAAAGAGATTAAAGCTTAATCAAATAGTAGATTTTTAAAAAAAATGATAACATTATCTCGTAATAATATCCAATCAATTCAAATTGAATTTATCCAAATTATATAGTTTTTTTTAATATTTATAACGAAGTTAAATTATAAAATTTGAAATAAAAAACTTCATCTATGTACCATAAAAAGTTTTTGAACTTTAAAGATATTTAATGAATCTTTTGACTTCTAGCCTTTAGGTTTTTCAAAAACATTGAAAATGATCCAATAACGAAAACACTAAACTTTTTGTTCTATTTAACAGTTTTTTTTTTAAATAAAATGAACCTATTAGACGTGAAAGATACAAAAATACATAAAAACTTTGGATGAAAATACAAAACAGATATAACTCATTTTCTTTTGAAAATTAAAAAAGGAGAACCTCTATTGAATAGAACAGGTCGAACCAAAACTTCTTCACAAACCGGCTTTATTTTAGATAAAAAAAATGCCCTACGGTTTTATAGAAATTGTGTATTATGGCTTATGTAGTCAAATCCTATTTGAGTATCACGTCAAATTTTATATTTTTATTTTTAAATTTTCGTTATTTTTTTTCATTTTAGGTAAAAAATGACATCGTTACAGAAAAAATTATCCATCAGAGTAGTGAGGATTCAAACTCGCCAAACAAACTCATTGATCAAAGTCAATCAAGGTTTTCATTAACGAAAAGACTCGAGTCGTTTAGATCAATCCGATTCACTCAAGCAGCTTCACCAAAAAAGAATACGAAATCGACCAACGTACAAACACCCACCATATCACACTCTTTATCATTTCCGCCACCAAAACCAACCTCGTTAAATAGAGTTAGTGAATCGCTAGAAAGCAAACGCGTTGGTTCAAAGTCAAAAAACAGAAAATCGAGCCAACAGTACCGATCGGTAGCGGCAATGTCGGTTTTGATGATGACGTTGGCAATGATGGTAGTTTGGGGAAGAATTTGTGCGATATTATGTACGGCAACATGGATTTTTATTGTAACAAGTTTAAGGTCAATTGTTGAAGAATATGAAGGAATTGATTTTGTTGAATCTGATTCATATTCGGAAGGGTTTAAGAAGAAATTAGTGGTTTTAAAAGGGTTTGTTTGTAGAAATCATAAATAATAGAAAATCTGGTGGAAGGAAGTATAGAGAAATGG

mRNA sequence

ATGGCCAAATCCTCAAATTCCAAATCCAAACCTCACTTTTTCCTCTGCTGTTTTGGATACTCCGACAAGCTTCCCCGCTTTAAGCCCCTCAAATCCCCCGCCGGTCACCGTAAACGTCAGTTTTCTTGGTTTAGGAACTCAAAGCCTCCTACGCCCCTTCATTCTTCCTCTTTTCCTTCCCATACGAACCGCTCCGTTACTAATTCCGACCGCCTCTCCTCGGTTTCTATTGCTCCCACTGCCACTACTAATTCCTCCAATGAAGATATAGCCGTCGCTGTGCCGGTGGCCACAAATCGAACCGGCGAGGAGGTGATCATCAGCCCGCATGAGGTAAAAAATGACATCGTTACAGAAAAAATTATCCATCAGAGTAGTGAGGATTCAAACTCGCCAAACAAACTCATTGATCAAAGTCAATCAAGGTTTTCATTAACGAAAAGACTCGAGTCGTTTAGATCAATCCGATTCACTCAAGCAGCTTCACCAAAAAAGAATACGAAATCGACCAACGTACAAACACCCACCATATCACACTCTTTATCATTTCCGCCACCAAAACCAACCTCGTTAAATAGAGTTAGTGAATCGCTAGAAAGCAAACGCGTTGGTTCAAAGTCAAAAAACAGAAAATCGAGCCAACAGTACCGATCGGTAGCGGCAATGTCGGTTTTGATGATGACGTTGGCAATGATGGTAGTTTGGGGAAGAATTTGTGCGATATTATGTACGGCAACATGGATTTTTATTGTAACAAGTTTAAGGTCAATTGTTGAAGAATATGAAGGAATTGATTTTGTTGAATCTGATTCATATTCGGAAGGGTTTAAGAAGAAATTAGTGGTTTTAAAAGGGTTTGTTTGTAGAAATCATAAATAA

Coding sequence (CDS)

ATGGCCAAATCCTCAAATTCCAAATCCAAACCTCACTTTTTCCTCTGCTGTTTTGGATACTCCGACAAGCTTCCCCGCTTTAAGCCCCTCAAATCCCCCGCCGGTCACCGTAAACGTCAGTTTTCTTGGTTTAGGAACTCAAAGCCTCCTACGCCCCTTCATTCTTCCTCTTTTCCTTCCCATACGAACCGCTCCGTTACTAATTCCGACCGCCTCTCCTCGGTTTCTATTGCTCCCACTGCCACTACTAATTCCTCCAATGAAGATATAGCCGTCGCTGTGCCGGTGGCCACAAATCGAACCGGCGAGGAGGTGATCATCAGCCCGCATGAGGTAAAAAATGACATCGTTACAGAAAAAATTATCCATCAGAGTAGTGAGGATTCAAACTCGCCAAACAAACTCATTGATCAAAGTCAATCAAGGTTTTCATTAACGAAAAGACTCGAGTCGTTTAGATCAATCCGATTCACTCAAGCAGCTTCACCAAAAAAGAATACGAAATCGACCAACGTACAAACACCCACCATATCACACTCTTTATCATTTCCGCCACCAAAACCAACCTCGTTAAATAGAGTTAGTGAATCGCTAGAAAGCAAACGCGTTGGTTCAAAGTCAAAAAACAGAAAATCGAGCCAACAGTACCGATCGGTAGCGGCAATGTCGGTTTTGATGATGACGTTGGCAATGATGGTAGTTTGGGGAAGAATTTGTGCGATATTATGTACGGCAACATGGATTTTTATTGTAACAAGTTTAAGGTCAATTGTTGAAGAATATGAAGGAATTGATTTTGTTGAATCTGATTCATATTCGGAAGGGTTTAAGAAGAAATTAGTGGTTTTAAAAGGGTTTGTTTGTAGAAATCATAAATAA

Homology

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BLAST of CSPI07G18800 vs. Swiss-Prot
Match: Y5316_ARATH (Uncharacterized protein At5g23160 OS=Arabidopsis thaliana GN=At5g23160 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.4e-06
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 1


Query: 195 SESLESKRVGSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICAILCTATWIFIVTSL 254
           S+  E +   S+ + R    +   V  +S++M+TL +M+ WGR+CAILCT+TW +I   L
Sbjct: 158 SKPKEIREKSSRVRKRSRVSKLDPVIGISIIMLTLMIMLTWGRLCAILCTSTWCYIFPRL 217

Query: 255 RSIV--------------EEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK 293
           +                 +  EG    + D  S  +KKK VVL+GF+ R H+
Sbjct: 218 KEAATAVAVVNRKRSGSGKGEEGSFQGDLDLNSVAYKKK-VVLEGFLVRQHR 268

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BLAST of CSPI07G18800 vs. TrEMBL
Match: A0A0A0K6H3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420760 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 1.3e-140
Identity = 273/292 (93.49%), Postives = 274/292 (93.84%), Query Frame = 1


Query: 1   MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS 60
           MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS
Sbjct: 1   MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS 60

Query: 61  HTNRSVTNSDRLSSVSIAPTATTNSSNEDIAVAVPVATNRTGEEVIISPHEVKNDIVTEK 120
           HTNRSVTNSDRLSSVSIAPTATTNSSNED+  AVPVATNRTGEEVIISPHEVKND V  K
Sbjct: 61  HTNRSVTNSDRLSSVSIAPTATTNSSNEDL--AVPVATNRTGEEVIISPHEVKNDTVAGK 120

Query: 121 IIHQSSEDSNSPNKLIDQSQSRFSLTKRLESFRSIRFTQAASPKKNTKSTNVQTPTISHS 180
            IH SSE SNSPNK IDQSQSRFSLTKRLESFRSIRF Q A PKKNTKS NVQTPTISHS
Sbjct: 121 TIHGSSEHSNSPNKPIDQSQSRFSLTKRLESFRSIRFNQTAPPKKNTKSINVQTPTISHS 180

Query: 181 LSFPPPKPTSLNRVSESLESKRVGSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICA 240
           LSFPPPKPT  NRVSE  ESKRV SKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICA
Sbjct: 181 LSFPPPKPTPSNRVSELRESKRVCSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICA 240

Query: 241 ILCTATWIFIVTSLRSIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK 293
           ILCTATWIFIVTSLRSIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK
Sbjct: 241 ILCTATWIFIVTSLRSIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK 290

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BLAST of CSPI07G18800 vs. TrEMBL
Match: B9SCQ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1375760 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.7e-09
Identity = 84/308 (27.27%), Postives = 145/308 (47.08%), Query Frame = 1


Query: 8   KSKP---HFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPSHTNR 67
           K+KP   +FFL CFG+S K P     KS   +RK    WF  S         S     + 
Sbjct: 2   KAKPKAANFFLGCFGFSRK-PSVSGKKSQKNYRKH---WFSRSTFLLKQSGGSRTVPVDS 61

Query: 68  SVTNSDRLSSVSI----APTATTNSSNEDIAVAVPVATNRTGEEV-IISPHEVKNDIVTE 127
           ++++    + +S     +     NS+N  +    P A +       I+S  +   +   +
Sbjct: 62  NLSDDKLETKISFMFKRSKLKKINSNNISLERENPAAQDTIPTSAPIVSVEDTPKETCDK 121

Query: 128 KIIHQSSEDSNSPNKLIDQSQSRFSLTKRLESFRSIRFTQAASPKKNTK-------STNV 187
            IIH++ +  +    ++ +S  +FSL +++++ R+   +Q  SP++ +K       ST++
Sbjct: 122 NIIHENGKRLD----VVMESPKKFSLRRKIDTKRN-GSSQPGSPEEKSKPNRSIPQSTSL 181

Query: 188 QTPTISHSLSFPPPKPTSLNRVSESLESKRVGSKSKNRKSS---QQYRSVAAMSVLMMTL 247
           Q  TI H                +  E  RV +K   RK+    + +  V  MS++M+TL
Sbjct: 182 QAATIQH----------------KQPEKSRVIAKKDRRKNEMIGKGFDPVIGMSIVMVTL 241

Query: 248 AMMVVWGRICAILCTATWIFIVTSLRS-----IVEEYEGIDFVESDSYSEGFKKKLVVLK 293
            +M++WGR+CAILCT  W++    L++      +E+  G     SD Y     KK VVL+
Sbjct: 242 IIMLLWGRLCAILCTCAWLYFTRRLKTDMSPRQIEKIRGEPDFSSDEY-----KKRVVLE 279

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BLAST of CSPI07G18800 vs. TrEMBL
Match: A0A151TQV9_CAJCA (Uncharacterized protein At5g23160 family OS=Cajanus cajan GN=KK1_008655 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-08
Identity = 45/105 (42.86%), Postives = 69/105 (65.71%), Query Frame = 1


Query: 193 RVSESLESKRVGSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICAILCTATWIFIVT 252
           RVS S++S+R   K+KN +SS  Y  V  MSVL++TL +++ WGR+CAILCT+ W++   
Sbjct: 103 RVSSSVQSQRTSKKAKNARSS--YDPVVGMSVLVVTLVIIIFWGRLCAILCTSLWLYCTP 162

Query: 253 SLRSI--VEEYEGIDFVES-DSY--SEGFKKKLVVLKGFVCRNHK 293
             R+I  V + +     +S D Y  SE +KKK V+++G + RNH+
Sbjct: 163 RFRNIGAVNDDDRPHTTKSNDGYFDSEEYKKK-VIMEGLLERNHR 204

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BLAST of CSPI07G18800 vs. TrEMBL
Match: A0A067KMZ3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09778 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.7e-07
Identity = 55/161 (34.16%), Postives = 85/161 (52.80%), Query Frame = 1


Query: 134 KLIDQSQSRFSLTKRLESFRSIRFTQAASPKKNTKSTNVQT-PTISHSLSFPPPKPTSLN 193
           K +D +    +  K L   R I   +  S +  +     Q+  T+  S+S P        
Sbjct: 129 KHMDHAMDSVASPKNLSFRRKIDAIRTGSSQPGSLEDKPQSHATVDRSISLPS------- 188

Query: 194 RVSESLESKRVGSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICAILCTATWIFIVT 253
             +  +E  RVG K K RK  +++  V  MS++M+TL +M++WGR+CAILCT  W++ V 
Sbjct: 189 -ATHRVEKSRVGPK-KPRK--EKFDPVIGMSIVMVTLIIMLLWGRMCAILCTCAWLYFVP 248

Query: 254 SLRSIVE-EYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK 293
            LR+  E    G   V+ D  SE  KK+ VV++GF+ RNH+
Sbjct: 249 RLRTQDEIGKNGAVAVKPDFSSEEHKKR-VVMEGFLDRNHR 277

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BLAST of CSPI07G18800 vs. TrEMBL
Match: M1D617_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400032563 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.2e-07
Identity = 86/307 (28.01%), Postives = 144/307 (46.91%), Query Frame = 1


Query: 6   NSKSKPHFFLCCFGYSDK----LPRFKPLKSPAGHRKRQFSWF--RNSKPPTPLHSSSFP 65
           N K +  +FL CFG+S+     L   K +K     +   FS    +NS     +      
Sbjct: 9   NKKLRKSYFLSCFGFSNTETELLSVNKSVKKKNKSKLLSFSKILRKNSSAAKTIPVDISD 68

Query: 66  SHTNRS----VTNSDRLSSVSIAPTATTNSSNEDIAVAVPVATNRTGEEVIISPHEVKND 125
              NRS    V  S+++ + +IA   T            PV  ++    +     +   D
Sbjct: 69  KFDNRSKEIHVVKSEKVKTPAIAGDVTQ----------APVVKSQNQTNIHEKYIKKTKD 128

Query: 126 IVTEKIIHQSSEDSNSPNKLIDQSQSRFSLTKRLESFRSIRFTQAASPKKNTKSTNVQTP 185
             T+ IIH++++   S +KL+D+   R + T R E  RS+  +   +  +  K       
Sbjct: 129 HKTKDIIHKNNK---SLDKLLDKV--RDNSTCRNEFSRSVTISSTHNSNQIIKIPTKDKH 188

Query: 186 TI--SHSLSFPPPK---PTSLNRVSESLESKRVGSKSKNRKSSQQYRSVAAMSVLMMTLA 245
            I  SHS S PPPK   P +  +V++  +S +   + +   S   + S+  MS+LM+TL 
Sbjct: 189 EIKFSHSKSLPPPKQKNPVTGKKVNDDEKSSQ--RRRERVLSHDNFDSIMGMSILMVTLL 248

Query: 246 MMVVWGRICAILCTATWIFIVTSLRS-----IVEEYEGIDFVESDSYSEGFKKKLVVLKG 293
           +M+ WG+ CAI+CT  W + +  +R+     I  + +G+   + D  S  +KKK VVL+G
Sbjct: 249 IMLFWGKACAIVCTCAWFYFLPRIRTKNEAVIAGKIDGV-AGDVDLNSAEYKKK-VVLEG 296

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BLAST of CSPI07G18800 vs. TAIR10
Match: AT5G23160.1 (AT5G23160.1 unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 1


Query: 195 SESLESKRVGSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICAILCTATWIFIVTSL 254
           S+  E +   S+ + R    +   V  +S++M+TL +M+ WGR+CAILCT+TW +I   L
Sbjct: 158 SKPKEIREKSSRVRKRSRVSKLDPVIGISIIMLTLMIMLTWGRLCAILCTSTWCYIFPRL 217

Query: 255 RSIV--------------EEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK 293
           +                 +  EG    + D  S  +KKK VVL+GF+ R H+
Sbjct: 218 KEAATAVAVVNRKRSGSGKGEEGSFQGDLDLNSVAYKKK-VVLEGFLVRQHR 268

[Close]

BLAST of CSPI07G18800 vs. TAIR10
Match: AT5G08240.1 (AT5G08240.1 unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 9.5e-07
Identity = 71/285 (24.91%), Postives = 122/285 (42.81%), Query Frame = 1


Query: 13  FFLCCFGYSDKLPRFKPL--KSPAGHRKRQFSWFRNSKPPTPLHSSSFPSHTNRSVTNSD 72
           +FL CFG+S K+   KP+  K   G +K+     +  + P     S F            
Sbjct: 17  YFLGCFGFSRKIYSDKPMVTKGDGGEKKKM----KKKRIPRWFLCSKF------------ 76

Query: 73  RLSSVSIAPTATTNSSNEDIAVAVPVATNRTGEEVIISPHEVKNDIVTEKIIHQSSEDSN 132
           RL +  I P+    +      V       +    VI    + KN  V +K ++Q ++++ 
Sbjct: 77  RLKNSEIKPSPIEETEKPTSRVEDETDDKQKPLSVIRRITDRKNIPVDDKAMNQETKETK 136

Query: 133 SPNKLIDQSQSRFSLTKRLESFRSIRFTQAASPKKNTKSTNVQTPTISHSLSFPPPKPTS 192
            P  L D +  R    + L SF+    T+             +  +IS     P  KPT 
Sbjct: 137 -PKDLRDITPDRSKPIEPLGSFKEDTCTE-------------RISSISSRYGKPDLKPT- 196

Query: 193 LNRVSESLESKRVGSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICAILCTATWIFI 252
                          +S+N    + +  V  +S++++TL +M+VWGR+CAILCT+ W ++
Sbjct: 197 ---------------RSRNGSRVKPFDPVIGISIIILTLMIMLVWGRLCAILCTSAWCYV 254

Query: 253 VTSLR---SIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK 293
           +  +R   ++ +          D  SE +K+K VVL GF+ R ++
Sbjct: 257 LPRVRDAAALAKRKRNGSASVPDLNSESYKRK-VVLDGFLGRQNR 254

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BLAST of CSPI07G18800 vs. NCBI nr
Match: gi|778728461|ref|XP_011659425.1| (PREDICTED: uncharacterized protein LOC105436182 isoform X1 [Cucumis sativus])

HSP 1 Score: 507.3 bits (1305), Expect = 1.8e-140
Identity = 273/292 (93.49%), Postives = 274/292 (93.84%), Query Frame = 1


Query: 1   MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS 60
           MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS
Sbjct: 1   MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS 60

Query: 61  HTNRSVTNSDRLSSVSIAPTATTNSSNEDIAVAVPVATNRTGEEVIISPHEVKNDIVTEK 120
           HTNRSVTNSDRLSSVSIAPTATTNSSNED+  AVPVATNRTGEEVIISPHEVKND V  K
Sbjct: 61  HTNRSVTNSDRLSSVSIAPTATTNSSNEDL--AVPVATNRTGEEVIISPHEVKNDTVAGK 120

Query: 121 IIHQSSEDSNSPNKLIDQSQSRFSLTKRLESFRSIRFTQAASPKKNTKSTNVQTPTISHS 180
            IH SSE SNSPNK IDQSQSRFSLTKRLESFRSIRF Q A PKKNTKS NVQTPTISHS
Sbjct: 121 TIHGSSEHSNSPNKPIDQSQSRFSLTKRLESFRSIRFNQTAPPKKNTKSINVQTPTISHS 180

Query: 181 LSFPPPKPTSLNRVSESLESKRVGSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICA 240
           LSFPPPKPT  NRVSE  ESKRV SKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICA
Sbjct: 181 LSFPPPKPTPSNRVSELRESKRVCSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICA 240

Query: 241 ILCTATWIFIVTSLRSIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK 293
           ILCTATWIFIVTSLRSIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK
Sbjct: 241 ILCTATWIFIVTSLRSIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK 290

[Close]

BLAST of CSPI07G18800 vs. NCBI nr
Match: gi|659122859|ref|XP_008461362.1| (PREDICTED: uncharacterized protein At5g23160 [Cucumis melo])

HSP 1 Score: 463.8 bits (1192), Expect = 2.3e-127
Identity = 246/292 (84.25%), Postives = 262/292 (89.73%), Query Frame = 1


Query: 1   MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS 60
           MAKSSNSKSKPHFFL CFG+SDKL RFKP KSPAGHRKR FSWFRNSKPPTP+HSS FPS
Sbjct: 1   MAKSSNSKSKPHFFLSCFGFSDKLRRFKPPKSPAGHRKRPFSWFRNSKPPTPVHSS-FPS 60

Query: 61  HTNRSVTNSDRLSSVSIAPTATTNSSNEDIAVAVPVATNRTGEEVIISPHEVKNDIVTEK 120
           HTN SVTNSDRLSSVSIAPTAT+ SSNED+AVAVPVAT RTG+EVII PHEVKNDIV EK
Sbjct: 61  HTNPSVTNSDRLSSVSIAPTATSKSSNEDLAVAVPVATKRTGQEVIIGPHEVKNDIVAEK 120

Query: 121 IIHQSSEDSNSPNKLIDQSQSRFSLTKRLESFRSIRFTQAASPKKNTKSTNVQTPTISHS 180
            IH+S E SN PNK IDQSQSRFSLTK+LESFR +RFTQ ASPKKN KSTN+Q PTISHS
Sbjct: 121 TIHESCEHSNLPNKFIDQSQSRFSLTKKLESFRLVRFTQTASPKKNPKSTNLQRPTISHS 180

Query: 181 LSFPPPKPTSLNRVSESLESKRVGSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICA 240
           LSFPPPKP  LN+VSE   SK+ GS S NRKSSQ+YRS  AMSVLMMTLAMMV+WGRICA
Sbjct: 181 LSFPPPKPAPLNKVSEPSRSKQFGSMSANRKSSQRYRSAVAMSVLMMTLAMMVLWGRICA 240

Query: 241 ILCTATWIFIVTSLRSIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK 293
           ILCTATWIF+VTSLRSIVEEY+ IDFVESDSYSEGFKKKLVVLKGF+CRNHK
Sbjct: 241 ILCTATWIFVVTSLRSIVEEYDRIDFVESDSYSEGFKKKLVVLKGFMCRNHK 291

[Close]

BLAST of CSPI07G18800 vs. NCBI nr
Match: gi|778728464|ref|XP_011659426.1| (PREDICTED: uncharacterized protein LOC105436182 isoform X2 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 9.1e-52
Identity = 109/113 (96.46%), Postives = 110/113 (97.35%), Query Frame = 1


Query: 1   MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS 60
           MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS
Sbjct: 1   MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS 60

Query: 61  HTNRSVTNSDRLSSVSIAPTATTNSSNEDIAVAVPVATNRTGEEVIISPHEVK 114
           HTNRSVTNSDRLSSVSIAPTATTNSSNED+  AVPVATNRTGEEVIISPHE K
Sbjct: 61  HTNRSVTNSDRLSSVSIAPTATTNSSNEDL--AVPVATNRTGEEVIISPHEEK 111

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BLAST of CSPI07G18800 vs. NCBI nr
Match: gi|1009167402|ref|XP_015902099.1| (PREDICTED: uncharacterized protein At5g23160-like [Ziziphus jujuba])

HSP 1 Score: 71.6 bits (174), Expect = 2.5e-09
Identity = 91/328 (27.74%), Postives = 145/328 (44.21%), Query Frame = 1


Query: 3   KSSNSKSKPHFFLCCFGYSDKLPRFK------PLKSPAGHRKRQ---FSWFR-------- 62
           +SS S++ P +FL CFG+S K+P  K       ++S    +K++   FSW R        
Sbjct: 46  QSSKSRTTP-YFLRCFGFSRKVPNKKIRSFSVTVRSEDAKKKKKTWWFSWSRLHLKNSTI 105

Query: 63  -----------NSKPPTPLHSSSFPSHTNRSVTNSDRLSSVSIAPTATTNS-SNEDIAVA 122
                      + KP T L   S     ++S + S +   +++ P   TN  S     + 
Sbjct: 106 KTVPVDTTTAVSEKPITVLPPDS-KVQPSKSKSKSKKDKLITLKPKVPTNQYSQPPSEIE 165

Query: 123 VPVATNRTGEEVIISPHEVKNDIVTEKIIHQSSEDSNSPNKLIDQSQSRFSLTKRLESFR 182
           V VA N      I  P +++     +    +    SN  +      Q R S  +++E+ R
Sbjct: 166 VVVAANPDQAPNIEKPLQIRYSPAGKHSCLRRLNSSNDDDDNNTTGQKRLSFGRKIEALR 225

Query: 183 SIRFTQAASPKKNTKSTNVQTPTISHSLSFPPPKPTSLNRVSESLESKRVGSKSKNRKSS 242
           +  F +  SP+ N       +P  S S    PPK TS+  V      K      KN   +
Sbjct: 226 T-GFQKTRSPEVNN------SPRSSPS----PPKWTSVKGVGTLSTKKIKSDPRKNVGPT 285

Query: 243 QQYRSVAAMSVLMMTLAMMVVWGRICAILCTATWIFIVTSLRSIVEEYEGI--------- 293
            +Y SV  MSV+M+TL ++ +WGR+CAILCT+ W + V   RS++     +         
Sbjct: 286 IKYDSVVGMSVIMVTLVILFLWGRLCAILCTSAWFYFVPRFRSVMANDNRVLVETTPTTK 345

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BLAST of CSPI07G18800 vs. NCBI nr
Match: gi|1009112489|ref|XP_015868706.1| (PREDICTED: uncharacterized protein At5g23160-like [Ziziphus jujuba])

HSP 1 Score: 71.6 bits (174), Expect = 2.5e-09
Identity = 91/328 (27.74%), Postives = 145/328 (44.21%), Query Frame = 1


Query: 3   KSSNSKSKPHFFLCCFGYSDKLPRFK------PLKSPAGHRKRQ---FSWFR-------- 62
           +SS S++ P +FL CFG+S K+P  K       ++S    +K++   FSW R        
Sbjct: 46  QSSKSRTTP-YFLRCFGFSRKVPNKKIRFFSVTVRSEDAKKKKKTWWFSWSRLHLKNSTI 105

Query: 63  -----------NSKPPTPLHSSSFPSHTNRSVTNSDRLSSVSIAPTATTNS-SNEDIAVA 122
                      + KP T L   S     ++S + S +   +++ P   TN  S     + 
Sbjct: 106 KTVPVDTTTAVSEKPITVLPPDS-KVQPSKSKSKSKKDKLITLKPKVPTNQYSQPPSEIE 165

Query: 123 VPVATNRTGEEVIISPHEVKNDIVTEKIIHQSSEDSNSPNKLIDQSQSRFSLTKRLESFR 182
           V VA N      I  P +++     +    +    SN  +      Q R S  +++E+ R
Sbjct: 166 VVVAANPDQAPNIEKPLQIRYSPAGKHSCLRRLNSSNDDDDNNTTGQKRLSFGRKIEALR 225

Query: 183 SIRFTQAASPKKNTKSTNVQTPTISHSLSFPPPKPTSLNRVSESLESKRVGSKSKNRKSS 242
           +  F +  SP+ N       +P  S S    PPK TS+  V      K      KN   +
Sbjct: 226 T-GFQKTRSPEVNN------SPRSSPS----PPKWTSVKGVGTLSTKKIKSDPRKNVGPT 285

Query: 243 QQYRSVAAMSVLMMTLAMMVVWGRICAILCTATWIFIVTSLRSIVEEYEGI--------- 293
            +Y SV  MSV+M+TL ++ +WGR+CAILCT+ W + V   RS++     +         
Sbjct: 286 IKYDSVVGMSVIMVTLVILFLWGRLCAILCTSAWFYFVPRFRSVMANDNRVLVETTPTTK 345

The following BLAST results are available for this feature:

BLAST of CSPI07G18800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5316_ARATH	4.4e-06	33.04	Uncharacterized protein At5g23160 OS=Arabidopsis thaliana GN=At5g23160 PE=2 SV=1	[more]

BLAST of CSPI07G18800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6H3_CUCSA	1.3e-140	93.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420760 PE=4 SV=1	[more]
B9SCQ1_RICCO	8.7e-09	27.27	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1375760 PE=4 SV=1	[more]
A0A151TQV9_CAJCA	1.5e-08	42.86	Uncharacterized protein At5g23160 family OS=Cajanus cajan GN=KK1_008655 PE=4 SV=...	[more]
A0A067KMZ3_JATCU	3.7e-07	34.16	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09778 PE=4 SV=1	[more]
M1D617_SOLTU	6.2e-07	28.01	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400032563 PE=4 SV=1	[more]

BLAST of CSPI07G18800 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23160.1	2.5e-07	33.04	unknown protein	[more]
AT5G08240.1	9.5e-07	24.91	unknown protein	[more]

BLAST of CSPI07G18800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778728461\|ref\|XP_011659425.1\|	1.8e-140	93.49	PREDICTED: uncharacterized protein LOC105436182 isoform X1 [Cucumis sativus]	[more]
gi\|659122859\|ref\|XP_008461362.1\|	2.3e-127	84.25	PREDICTED: uncharacterized protein At5g23160 [Cucumis melo]	[more]
gi\|778728464\|ref\|XP_011659426.1\|	9.1e-52	96.46	PREDICTED: uncharacterized protein LOC105436182 isoform X2 [Cucumis sativus]	[more]
gi\|1009167402\|ref\|XP_015902099.1\|	2.5e-09	27.74	PREDICTED: uncharacterized protein At5g23160-like [Ziziphus jujuba]	[more]
gi\|1009112489\|ref\|XP_015868706.1\|	2.5e-09	27.74	PREDICTED: uncharacterized protein At5g23160-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G18800.1	CSPI07G18800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34379	FAMILY NOT NAMED	coord: 1..292 score: 1.7
None	No IPR available	PANTHER	PTHR34379:SF1	SUBFAMILY NOT NAMED	coord: 1..292 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G18800	Cla015201	Watermelon (97103) v1	cpiwmB587
CSPI07G18800	Csa7G420760	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G18800	MELO3C023593	Melon (DHL92) v3.5.1	cpimeB525
CSPI07G18800	ClCG09G004510	Watermelon (Charleston Gray)	cpiwcgB555
CSPI07G18800	Lsi02G025330	Bottle gourd (USVL1VR-Ls)	cpilsiB517
CSPI07G18800	MELO3C023593.2	Melon (DHL92) v3.6.1	cpimedB512
CSPI07G18800	CsaV3_7G030630	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G18800	Cla97C09G166860	Watermelon (97103) v2	cpiwmbB598
CSPI07G18800	Bhi09G000603	Wax gourd	cpiwgoB716
CSPI07G18800	Cucsa.128280	Cucumber (Gy14) v1	cgycpiB180
CSPI07G18800	CmaCh17G009870	Cucurbita maxima (Rimu)	cmacpiB392
CSPI07G18800	CmoCh17G009570	Cucurbita moschata (Rifu)	cmocpiB381
CSPI07G18800	Cp4.1LG12g06380	Cucurbita pepo (Zucchini)	cpecpiB163
CSPI07G18800	CsGy7G017230	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G18800	Carg07078	Silver-seed gourd	carcpiB0124

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G18800	Cucumber (Chinese Long) v3	cpicucB395
CSPI07G18800	Watermelon (97103) v2	cpiwmbB541
CSPI07G18800	Wax gourd	cpiwgoB658
CSPI07G18800	Cucurbita maxima (Rimu)	cmacpiB934
CSPI07G18800	Wild cucumber (PI 183967)	cpicpiB142
CSPI07G18800	Cucurbita maxima (Rimu)	cmacpiB276
CSPI07G18800	Cucurbita maxima (Rimu)	cmacpiB502
CSPI07G18800	Cucurbita moschata (Rifu)	cmocpiB266
CSPI07G18800	Cucurbita moschata (Rifu)	cmocpiB492
CSPI07G18800	Cucurbita moschata (Rifu)	cmocpiB913
CSPI07G18800	Cucumber (Chinese Long) v2	cpicuB338
CSPI07G18800	Melon (DHL92) v3.5.1	cpimeB559
CSPI07G18800	Watermelon (Charleston Gray)	cpiwcgB560
CSPI07G18800	Watermelon (97103) v1	cpiwmB593
CSPI07G18800	Cucurbita pepo (Zucchini)	cpecpiB344
CSPI07G18800	Cucurbita pepo (Zucchini)	cpecpiB588
CSPI07G18800	Cucurbita pepo (Zucchini)	cpecpiB637
CSPI07G18800	Bottle gourd (USVL1VR-Ls)	cpilsiB530
CSPI07G18800	Melon (DHL92) v3.6.1	cpimedB544
CSPI07G18800	Cucumber (Gy14) v2	cgybcpiB154
CSPI07G18800	Silver-seed gourd	carcpiB0489
CSPI07G18800	Silver-seed gourd	carcpiB0801