CSPI07G18650 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G18650
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Serine/arginine repetitive matrix protein 2, putative isoform 1
Location	Chr7 : 16594190 .. 16594742 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTCTCTGCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCGTCCTCACCTCTTCCGCCGTCCTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCCCTGAATCTCCTTCTTCTTCCGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCATCCTCGTTCGACGATCTGCCCCCGATTGGCTCCCCTTCGTTCCCGGCGCTTCCTATTGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCCCATTGCCAACGTTCTTCGTAACTTGGCTAACCCTCTCTCTCCTGAACAATCCTTGTCTACCACTACCGTCCGTGGCTGGCCCTCTTCTCATTACTTCATTCAAGGTATTCCTCTTCTCTCGTATTTCGTTTTCATTTTATCTCTACTCTCTCTCTTTCTTTAAATTATTTATTTAGGAAATAAAATACCCTTTCATCGTAGGTACGCATCTTCCTTCTCTTGATCCGGAGGTTGACACCACGTTGACTGAGTGTGATGCTTCCCTTGACCACGAGGAAGGATGA

mRNA sequence

ATGTCTCTCTCTGCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCGTCCTCACCTCTTCCGCCGTCCTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCCCTGAATCTCCTTCTTCTTCCGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCATCCTCGTTCGACGATCTGCCCCCGATTGGCTCCCCTTCGTTCCCGGCGCTTCCTATTGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCCCATTGCCAACGTTCTTCGTAACTTGGCTAACCCTCTCTCTCCTGAACAATCCTTGTCTACCACTACCGTCCGTGGCTGGCCCTCTTCTCATTACTTCATTCAAGGTACGCATCTTCCTTCTCTTGATCCGGAGGTTGACACCACGTTGACTGAGTGTGATGCTTCCCTTGACCACGAGGAAGGATGA

Coding sequence (CDS)

ATGTCTCTCTCTGCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCGTCCTCACCTCTTCCGCCGTCCTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCCCTGAATCTCCTTCTTCTTCCGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCATCCTCGTTCGACGATCTGCCCCCGATTGGCTCCCCTTCGTTCCCGGCGCTTCCTATTGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCCCATTGCCAACGTTCTTCGTAACTTGGCTAACCCTCTCTCTCCTGAACAATCCTTGTCTACCACTACCGTCCGTGGCTGGCCCTCTTCTCATTACTTCATTCAAGGTACGCATCTTCCTTCTCTTGATCCGGAGGTTGACACCACGTTGACTGAGTGTGATGCTTCCCTTGACCACGAGGAAGGATGA

Homology

[Close]

BLAST of CSPI07G18650 vs. TrEMBL
Match: A0A0A0K9L9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G419630 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.3e-80
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 1


Query: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120

Query: 121 YFIQGTHLPSLDPEVDTTLTECDASLDHEEG 152
           YFIQGTHLPSLDPEVDTT TECDASLDHEEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDHEEG 151

[Close]

BLAST of CSPI07G18650 vs. TrEMBL
Match: W9RL76_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003796 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.8e-29
Identity = 82/162 (50.62%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 10  KSLTLTLNLLRPHL---FRRPFSS------------PSDH----DLTDLPE-SPSSSDPL 69
           +SL+ TL L R HL   F +P SS            PS H    DL DL + S SSSDPL
Sbjct: 3   RSLSQTLTLSRHHLSPKFPQPSSSSLLLSLRTQSNLPSSHGGGGDLADLSDASSSSSDPL 62

Query: 70  LRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLS 129
           LR LEDAI RI+VRRSAPDWLPF+PGASYWVP P  S    + +++  LANPL+ E+S+S
Sbjct: 63  LRKLEDAIHRIIVRRSAPDWLPFLPGASYWVP-PPRSRNYGLNHLVEKLANPLTQEESMS 122

Query: 130 TTTVRGWPSSHYFIQGTHLPSLDPEVDTTLTECDASLDHEEG 152
           TTTVRGWPSS YFI G     ++   +++ +     L+ EEG
Sbjct: 123 TTTVRGWPSSDYFIHGVSPHQIESAEESSKSNKLLQLEDEEG 163

[Close]

BLAST of CSPI07G18650 vs. TrEMBL
Match: A0A061GB08_THECC (Serine/arginine repetitive matrix protein 2, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_027826 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.4e-28
Identity = 74/149 (49.66%), Postives = 98/149 (65.77%), Query Frame = 1


Query: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           + LS ++KP+  +  L L      R   + P+  D +D     SSSDPLL+ LEDAI RI
Sbjct: 37  IKLSLVTKPRPSSRLLPL------RTLSNQPNHSDPSDPSSDTSSSDPLLQKLEDAIHRI 96

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           +VRRSAPDWLPF+PG+SYWVP PS +    +A ++  LANPL+PE+S+STTTVRGWPSS 
Sbjct: 97  IVRRSAPDWLPFIPGSSYWVP-PSTAQSYGLAQLVEKLANPLTPEESMSTTTVRGWPSSE 156

Query: 121 YFIQGTHLPSLDPEVDTTLTECDASLDHE 150
           YFI+G    S+  E++T+      S D E
Sbjct: 157 YFIKGGTPHSV--ELNTSSNTASKSEDEE 176

[Close]

BLAST of CSPI07G18650 vs. TrEMBL
Match: A0A0D2REU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G002900 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.7e-28
Identity = 71/127 (55.91%), Postives = 87/127 (68.50%), Query Frame = 1


Query: 25  RRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS 84
           R   S P+  D +D   S SSSDPLLR LEDAI RI+VRRSAPDWLPF+PG+SYWVP P 
Sbjct: 29  RTQSSQPNHFDQSDA-SSESSSDPLLRKLEDAIHRIIVRRSAPDWLPFLPGSSYWVP-PP 88

Query: 85  NSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSHYFIQGTHLPSLDPEVDTTLTECDA 144
            S    +A ++  LANPL+PE+SLSTTTVRGWPSS YFI+G     ++ E+ +      +
Sbjct: 89  TSQSYGLAQIVEKLANPLTPEESLSTTTVRGWPSSEYFIKGGSPHPVEVEMKSNA----S 148

Query: 145 SLDHEEG 152
           S   EEG
Sbjct: 149 SKSEEEG 149

[Close]

BLAST of CSPI07G18650 vs. TrEMBL
Match: B9HK40_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s00650g PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-27
Identity = 78/152 (51.32%), Postives = 96/152 (63.16%), Query Frame = 1


Query: 6   LSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRILVRRS 65
           L+ P   +  L  LR        +SPS+ D  D   + SS+DPLLR LEDAI RI+VRR+
Sbjct: 15  LTSPTRFSSRLLTLRAQSNIPNSNSPSETD--DSSSASSSTDPLLRKLEDAIHRIIVRRA 74

Query: 66  APDWLPFVPGASYWVPLP-SNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSHYFIQ 125
           APDWLPF+PG+SYWVP P S S    IA+++  LANPLS E+SLSTTTVRGWPSS YF++
Sbjct: 75  APDWLPFLPGSSYWVPSPRSTSGSLGIAHLVEKLANPLSDEESLSTTTVRGWPSSDYFVK 134

Query: 126 GT-------HLPSLDPEVDTTLTECDASLDHE 150
           G         L S + E DTT +    S D E
Sbjct: 135 GAPAHMMELKLTSKEVESDTTSSNVSHSEDEE 164

[Close]

BLAST of CSPI07G18650 vs. TAIR10
Match: AT1G16840.4 (AT1G16840.4 unknown protein)

HSP 1 Score: 114.0 bits (284), Expect = 8.1e-26
Identity = 70/151 (46.36%), Postives = 92/151 (60.93%), Query Frame = 1


Query: 5   ALSKPKSLTLTLNLL-RPHLFR-RPFSSPSDHDLTDLPESPSS---SDPLLRNLEDAIQR 64
           +LSK +    + +LL   HL   R  SS    DL ++  S +S   SDPL++ LEDA+ R
Sbjct: 10  SLSKGRFAAASSSLLPSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLEDAVHR 69

Query: 65  ILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPS 124
           I VRR+ PDWLPFVPGASYWVP P S S    IA ++  LANPL+ E+SLST +  GWPS
Sbjct: 70  IFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSSHGWPS 129

Query: 125 SHYFIQGTHLPSLDPEVDTTLTECDASLDHE 150
           S YF++G     ++ + +TT      S D E
Sbjct: 130 SDYFLKGVQPQLMETKTETTSNSESHSEDEE 160

[Close]

BLAST of CSPI07G18650 vs. TAIR10
Match: AT1G78890.1 (AT1G78890.1 unknown protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.4e-25
Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 1


Query: 30  SPSDHDLTDLPESPSSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHL 89
           S S+H L  + E   ++DPL+  LEDA+ RI+VRRSAPDWLPFVPGAS+WVP P S SH 
Sbjct: 40  SNSNH-LGVIYEIDIAADPLVNKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSH- 99

Query: 90  PPIANVLRNLANPLSPEQSLSTTTVRGWPSSHYFIQGTHLPSLDPEV 136
             IA ++  LANP+S E+S+S ++VRGWP S YFI+G    S++ E+
Sbjct: 100 -GIAKLVEKLANPISDEESISISSVRGWPCSDYFIKGVKPQSVETEM 143

[Close]

BLAST of CSPI07G18650 vs. TAIR10
Match: AT2G19180.1 (AT2G19180.1 unknown protein)

HSP 1 Score: 80.9 bits (198), Expect = 7.6e-16
Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = 1


Query: 24  FRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP 83
           F R FSS       ++     +   +L+ L + ++RI+V  S PDWLPF PG+S+WVP P
Sbjct: 34  FSRRFSSIPQVIELEIDSKNEAEAAILKKLNEFVRRIIVHNSTPDWLPFAPGSSFWVP-P 93

Query: 84  SNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSHYFI 124
                  IAN++  + NPL+ E+SLS ++  GWP S +FI
Sbjct: 94  HQITATKIANLVDKVTNPLTEEESLSLSSPYGWPCSSFFI 132

[Close]

BLAST of CSPI07G18650 vs. NCBI nr
Match: gi|449436363|ref|XP_004135962.1| (PREDICTED: uncharacterized protein LOC101214133 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.8e-80
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 1


Query: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120

Query: 121 YFIQGTHLPSLDPEVDTTLTECDASLDHEEG 152
           YFIQGTHLPSLDPEVDTT TECDASLDHEEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDHEEG 151

[Close]

BLAST of CSPI07G18650 vs. NCBI nr
Match: gi|659120604|ref|XP_008460271.1| (PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo])

HSP 1 Score: 289.3 bits (739), Expect = 4.0e-75
Identity = 142/151 (94.04%), Postives = 145/151 (96.03%), Query Frame = 1


Query: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MS S+LSKPKSL LTLNLLRPH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIQGTHLPSLDPEVDTTLTECDASLDHEEG 152
           YFIQGTHLPSLDPEVDTT TECDASLD EEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151

[Close]

BLAST of CSPI07G18650 vs. NCBI nr
Match: gi|659120612|ref|XP_008460275.1| (PREDICTED: uncharacterized protein LOC103499150 isoform X3 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 2.1e-60
Identity = 118/126 (93.65%), Postives = 122/126 (96.83%), Query Frame = 1


Query: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MS S+LSKPKSL LTLNLLRPH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIQGT 127
           YFIQG+
Sbjct: 121 YFIQGS 126

[Close]

BLAST of CSPI07G18650 vs. NCBI nr
Match: gi|659120610|ref|XP_008460274.1| (PREDICTED: uncharacterized protein LOC103499150 isoform X2 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-59
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 1


Query: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
           MS S+LSKPKSL LTLNLLRPH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIQ 125
           YFIQ
Sbjct: 121 YFIQ 124

[Close]

BLAST of CSPI07G18650 vs. NCBI nr
Match: gi|703114197|ref|XP_010100581.1| (hypothetical protein L484_003796 [Morus notabilis])

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 82/162 (50.62%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 10  KSLTLTLNLLRPHL---FRRPFSS------------PSDH----DLTDLPE-SPSSSDPL 69
           +SL+ TL L R HL   F +P SS            PS H    DL DL + S SSSDPL
Sbjct: 3   RSLSQTLTLSRHHLSPKFPQPSSSSLLLSLRTQSNLPSSHGGGGDLADLSDASSSSSDPL 62

Query: 70  LRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLS 129
           LR LEDAI RI+VRRSAPDWLPF+PGASYWVP P  S    + +++  LANPL+ E+S+S
Sbjct: 63  LRKLEDAIHRIIVRRSAPDWLPFLPGASYWVP-PPRSRNYGLNHLVEKLANPLTQEESMS 122

Query: 130 TTTVRGWPSSHYFIQGTHLPSLDPEVDTTLTECDASLDHEEG 152
           TTTVRGWPSS YFI G     ++   +++ +     L+ EEG
Sbjct: 123 TTTVRGWPSSDYFIHGVSPHQIESAEESSKSNKLLQLEDEEG 163

The following BLAST results are available for this feature:

BLAST of CSPI07G18650 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G18650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9L9_CUCSA	1.3e-80	99.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G419630 PE=4 SV=1	[more]
W9RL76_9ROSA	8.8e-29	50.62	Uncharacterized protein OS=Morus notabilis GN=L484_003796 PE=4 SV=1	[more]
A0A061GB08_THECC	7.4e-28	49.66	Serine/arginine repetitive matrix protein 2, putative isoform 2 (Fragment) OS=Th...	[more]
A0A0D2REU4_GOSRA	9.7e-28	55.91	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G002900 PE=4 SV=1	[more]
B9HK40_POPTR	1.7e-27	51.32	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s00650g PE=4 SV=1	[more]

BLAST of CSPI07G18650 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16840.4	8.1e-26	46.36	unknown protein	[more]
AT1G78890.1	2.4e-25	55.14	unknown protein	[more]
AT2G19180.1	7.6e-16	40.00	unknown protein	[more]

BLAST of CSPI07G18650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436363\|ref\|XP_004135962.1\|	1.8e-80	99.34	PREDICTED: uncharacterized protein LOC101214133 [Cucumis sativus]	[more]
gi\|659120604\|ref\|XP_008460271.1\|	4.0e-75	94.04	PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo]	[more]
gi\|659120612\|ref\|XP_008460275.1\|	2.1e-60	93.65	PREDICTED: uncharacterized protein LOC103499150 isoform X3 [Cucumis melo]	[more]
gi\|659120610\|ref\|XP_008460274.1\|	1.4e-59	94.35	PREDICTED: uncharacterized protein LOC103499150 isoform X2 [Cucumis melo]	[more]
gi\|703114197\|ref\|XP_010100581.1\|	1.3e-28	50.62	hypothetical protein L484_003796 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G18650.1	CSPI07G18650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33972	FAMILY NOT NAMED	coord: 42..125 score: 2.1
None	No IPR available	PANTHER	PTHR33972:SF2	EXPRESSED PROTEIN	coord: 42..125 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G18650	Csa7G419630	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G18650	CsaV3_7G030470	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G18650	Cucsa.128410	Cucumber (Gy14) v1	cgycpiB180
CSPI07G18650	CsGy7G017100	Cucumber (Gy14) v2	cgybcpiB331

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G18650	Melon (DHL92) v3.6.1	cpimedB512
CSPI07G18650	Melon (DHL92) v3.6.1	cpimedB544
CSPI07G18650	Cucumber (Gy14) v2	cgybcpiB154
CSPI07G18650	Silver-seed gourd	carcpiB0124
CSPI07G18650	Silver-seed gourd	carcpiB0489
CSPI07G18650	Silver-seed gourd	carcpiB0801
CSPI07G18650	Silver-seed gourd	carcpiB0855
CSPI07G18650	Cucumber (Chinese Long) v3	cpicucB395
CSPI07G18650	Watermelon (97103) v2	cpiwmbB541
CSPI07G18650	Watermelon (97103) v2	cpiwmbB598
CSPI07G18650	Wax gourd	cpiwgoB658
CSPI07G18650	Wax gourd	cpiwgoB716
CSPI07G18650	Cucurbita maxima (Rimu)	cmacpiB934
CSPI07G18650	Wild cucumber (PI 183967)	cpicpiB142
CSPI07G18650	Cucurbita maxima (Rimu)	cmacpiB276
CSPI07G18650	Cucurbita maxima (Rimu)	cmacpiB392
CSPI07G18650	Cucurbita maxima (Rimu)	cmacpiB502
CSPI07G18650	Cucurbita moschata (Rifu)	cmocpiB266
CSPI07G18650	Cucurbita moschata (Rifu)	cmocpiB381
CSPI07G18650	Cucurbita moschata (Rifu)	cmocpiB492
CSPI07G18650	Cucurbita moschata (Rifu)	cmocpiB913
CSPI07G18650	Melon (DHL92) v3.5.1	cpimeB525
CSPI07G18650	Watermelon (Charleston Gray)	cpiwcgB555
CSPI07G18650	Watermelon (Charleston Gray)	cpiwcgB560
CSPI07G18650	Watermelon (97103) v1	cpiwmB587
CSPI07G18650	Watermelon (97103) v1	cpiwmB593
CSPI07G18650	Cucurbita pepo (Zucchini)	cpecpiB163
CSPI07G18650	Cucurbita pepo (Zucchini)	cpecpiB344
CSPI07G18650	Cucurbita pepo (Zucchini)	cpecpiB588
CSPI07G18650	Cucurbita pepo (Zucchini)	cpecpiB637
CSPI07G18650	Bottle gourd (USVL1VR-Ls)	cpilsiB517
CSPI07G18650	Bottle gourd (USVL1VR-Ls)	cpilsiB530