CSPI07G18600 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G18600
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptiontRNA:m(4)X modification enzyme TRM13
LocationChr7 : 16569535 .. 16571983 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAAGACATTGACAGTGAACCAAGAATTAGGGTTTTGAAATGGCTTCCCGTTGTCAGTTTTGGCTTCCAAAGAAGAACAGATTCTGTGCAGTTGCTCCAATTAACGATTCCAAGTACCACCATCTTTATTTCTCTGAAATTTAATGCCTATTTCAGTCGCTGGCTTCTCTTATAATTTTTCTTTCCTTTTCGAATTTTTTTGAAGATTTTGTGGCAATCACAGCTCCAGAGCTGATGGAGACATGGTTCCATGTCCTGTAGACCCGTCTCAGTAAGTTTAATAACTTTCTTTCTCATCTCTGTACTTAGTGTTCGTTAGCTTTGATATATAGTTTCCAGTTTGGTAATAATTCTTAGCCTATTATGTTCTCTATATTCACTTCTCTAGCTCTGTGCTTCGAGAAAATCTTCAAGGACATGTGAAGAGGTGTCCATTATTGAAACAAACTCAATCCTTGGCTGGTCAACCGTTCTATCAAAAGGGCATCAATGCTGGGGAGGAGGATTCGATGTCGTCAAATGGACCGCATTCGGGTTTGTCAGATAGTATTTCCTCTGAAATGAAGAGGAATATTGTTTATGGTATGTCTGGAGATCAATTTCATCGCCTTCTTGGAAAGATTAGAGCTCTTCATGATCTGATATGCAAGGATATTCAAGACTCTTATAAGATAAAGGAAGCTTGCAATATGTGGATTAAAGGGGAAATAGATAGGTACTTAGTTGTTGTTGGCAATTAATGGCTTTCATGGGATTTAATGGGTTTTCTAAATTGTCCTCTGTTTTCTTTTGAGTAGGAAAATTCCGTTTCAAGAGAAACACGTTCTGCAGCAGGCGTCAATTCTCGGAAACTTGGACGAATTTGGAGTGCTGAGTAATTACGATGGAGGTGAACAACGTGAGGGCGACCGATCATATGGCAATGACGCTAATGTCGTCCCCGCTGTGGTTGAATTTGGAGCAGGAAGAGGCTACCTAACTCAAATGCTTGCAGATTGTTATGGTATCAAGAGGGTGTTTCTGGTTGAGCGGAAATCGTACAAACTGAAGGTTAAAATTCAAGATTTCGCCCTTATGTACGTCTAGATTTTTAGCATTTTGATTGGTTAAATTTTGCCAGTACTAAACTTCATTTGGATTTATACCTTTTGACTTTGTGTGTTTTGTTACGCCAATGCAACCCCTAGGCTGATCGATCGCTACGACAGAAAGAGAGCTTGATTTTAGAGCGTTTGAGAATAGACAGTAAGGTTTTCTCAAATTATGTTTTATGGCTTTTCGAAAACCATCTCTTAATCTAGAGAGAAGTGCACGATAATCATATACCTGCATTCTTGTGTTAATTCCATCTGATTCTTGATCTTGATAACACAAGTACGGTTATTTTCATTCTTACAGTTGAGGATCTAAACTTGAATGCTGTTGAATCTCTGAGGCATAATCCTTACTTAGCCATTGGTAAACATCTCTGTGGGCCTGCAACAGGTTGTTAGATCGCAGTATTGAATTTATTGTAAACTATAGTTCTTACCCGAAATAAAGCTGTTTGAACACCTATTCCCGATTTTATTTCATAGATTTGGCTCTCAGATGTTGCCTTACCAAACAACCGAATCATGCTGTTACCGAACAGTGCAGAGATAAATCAAAATTGAGAGGTTTGGCGATAGCGACATGTTGCCATCACCTTTGTCAATGGAAGCATTACACAAGTAAGCAATCCCTTTACATCTTGCGAATATATGCCTCAAATGAGGTATCTTTTTCCTTGACTTTAGAAGAAAGCAGTACTCAGTATTAGCTAAATATGATCTTCTCTACAGATAAGAGATATTTATTAGAACTGGGAATCACAAAAGAAGAATTTCTTGCAATTACATGGTTCACTAGTTGGGCAGTGGATGCTAATCACAGTGAAGATATTTCAGATGTTACTGACTCAAAAACATTTTTTCAATCTAGGTAACCATTATCACGTGATCCATACAAAACCATTACTTTTACTGTTCATATTATAACCTTGTGATGCATGATAACAATTTTACATAAATTCTGCACAACTCCCATATCGTTGCAGTGAAAATGAAAGCGATGGGATGATTGGATGCACGGTAAAAGACATTGTAAAGAGTATGAATCCAGTGGAAAGGGCAGTCCTGGGATTTATGTGCAAGGAGATTATTGATATGGGAAGACTAATGTGGCTGAAGGAATGTGGATTGGAAACACAGCTTGTTAAGTATGTTCCATCTACCATTTCCCCTGAAAATCATTTACTAATCGCTAAATGCAGCAGACATAGTTGTGCTACTTAATTTTATGATGCAATTTAAATTTCTATGGTTTATTGTGAGAATAAGTGGGGTTAGTATTTACTCTTGAACAGTTTGGTTGTTGTTTAAAGAAAAACAAGCATTGAAAATCAAGGATGTGATGAAGAAAGAGCGC

mRNA sequence

ATGGCTTCCCGTTGTCAGTTTTGGCTTCCAAAGAAGAACAGATTCTGTGCAGTTGCTCCAATTAACGATTCCAAATTTTGTGGCAATCACAGCTCCAGAGCTGATGGAGACATGGTTCCATGTCCTGTAGACCCGTCTCACTCTGTGCTTCGAGAAAATCTTCAAGGACATGTGAAGAGGTGTCCATTATTGAAACAAACTCAATCCTTGGCTGGTCAACCGTTCTATCAAAAGGGCATCAATGCTGGGGAGGAGGATTCGATGTCGTCAAATGGACCGCATTCGGGTTTGTCAGATAGTATTTCCTCTGAAATGAAGAGGAATATTGTTTATGGTATGTCTGGAGATCAATTTCATCGCCTTCTTGGAAAGATTAGAGCTCTTCATGATCTGATATGCAAGGATATTCAAGACTCTTATAAGATAAAGGAAGCTTGCAATATGTGGATTAAAGGGGAAATAGATAGGAAAATTCCGTTTCAAGAGAAACACGTTCTGCAGCAGGCGTCAATTCTCGGAAACTTGGACGAATTTGGAGTGCTGAGTAATTACGATGGAGGTGAACAACGTGAGGGCGACCGATCATATGGCAATGACGCTAATGTCGTCCCCGCTGTGGTTGAATTTGGAGCAGGAAGAGGCTACCTAACTCAAATGCTTGCAGATTGTTATGGTATCAAGAGGGTGTTTCTGGTTGAGCGGAAATCGTACAAACTGAAGGCTGATCGATCGCTACGACAGAAAGAGAGCTTGATTTTAGAGCGTTTGAGAATAGACATTGAGGATCTAAACTTGAATGCTGTTGAATCTCTGAGGCATAATCCTTACTTAGCCATTGGTAAACATCTCTGTGGGCCTGCAACAGATTTGGCTCTCAGATGTTGCCTTACCAAACAACCGAATCATGCTGTTACCGAACAGTGCAGAGATAAATCAAAATTGAGAGGTTTGGCGATAGCGACATGTTGCCATCACCTTTGTCAATGGAAGCATTACACAAATAAGAGATATTTATTAGAACTGGGAATCACAAAAGAAGAATTTCTTGCAATTACATGGTTCACTAGTTGGGCAGTGGATGCTAATCACAGTGAAGATATTTCAGATGTTACTGACTCAAAAACATTTTTTCAATCTAGTGAAAATGAAAGCGATGGGATGATTGGATGCACGGTAAAAGACATTGTAAAGAGTATGAATCCAGTGGAAAGGGCAGTCCTGGGATTTATGTGCAAGGAGATTATTGATATGGGAAGACTAATGTGGCTGAAGGAATGTGGATTGGAAACACAGCTTGTTAAGTATGTTCCATCTACCATTTCCCCTGAAAATCATTTACTAATCGCTAAATGCAGCAGACATAGTTGTGCTACTTAA

Coding sequence (CDS)

ATGGCTTCCCGTTGTCAGTTTTGGCTTCCAAAGAAGAACAGATTCTGTGCAGTTGCTCCAATTAACGATTCCAAATTTTGTGGCAATCACAGCTCCAGAGCTGATGGAGACATGGTTCCATGTCCTGTAGACCCGTCTCACTCTGTGCTTCGAGAAAATCTTCAAGGACATGTGAAGAGGTGTCCATTATTGAAACAAACTCAATCCTTGGCTGGTCAACCGTTCTATCAAAAGGGCATCAATGCTGGGGAGGAGGATTCGATGTCGTCAAATGGACCGCATTCGGGTTTGTCAGATAGTATTTCCTCTGAAATGAAGAGGAATATTGTTTATGGTATGTCTGGAGATCAATTTCATCGCCTTCTTGGAAAGATTAGAGCTCTTCATGATCTGATATGCAAGGATATTCAAGACTCTTATAAGATAAAGGAAGCTTGCAATATGTGGATTAAAGGGGAAATAGATAGGAAAATTCCGTTTCAAGAGAAACACGTTCTGCAGCAGGCGTCAATTCTCGGAAACTTGGACGAATTTGGAGTGCTGAGTAATTACGATGGAGGTGAACAACGTGAGGGCGACCGATCATATGGCAATGACGCTAATGTCGTCCCCGCTGTGGTTGAATTTGGAGCAGGAAGAGGCTACCTAACTCAAATGCTTGCAGATTGTTATGGTATCAAGAGGGTGTTTCTGGTTGAGCGGAAATCGTACAAACTGAAGGCTGATCGATCGCTACGACAGAAAGAGAGCTTGATTTTAGAGCGTTTGAGAATAGACATTGAGGATCTAAACTTGAATGCTGTTGAATCTCTGAGGCATAATCCTTACTTAGCCATTGGTAAACATCTCTGTGGGCCTGCAACAGATTTGGCTCTCAGATGTTGCCTTACCAAACAACCGAATCATGCTGTTACCGAACAGTGCAGAGATAAATCAAAATTGAGAGGTTTGGCGATAGCGACATGTTGCCATCACCTTTGTCAATGGAAGCATTACACAAATAAGAGATATTTATTAGAACTGGGAATCACAAAAGAAGAATTTCTTGCAATTACATGGTTCACTAGTTGGGCAGTGGATGCTAATCACAGTGAAGATATTTCAGATGTTACTGACTCAAAAACATTTTTTCAATCTAGTGAAAATGAAAGCGATGGGATGATTGGATGCACGGTAAAAGACATTGTAAAGAGTATGAATCCAGTGGAAAGGGCAGTCCTGGGATTTATGTGCAAGGAGATTATTGATATGGGAAGACTAATGTGGCTGAAGGAATGTGGATTGGAAACACAGCTTGTTAAGTATGTTCCATCTACCATTTCCCCTGAAAATCATTTACTAATCGCTAAATGCAGCAGACATAGTTGTGCTACTTAA
Homology
[Close]
BLAST of CSPI07G18600 vs. Swiss-Prot
Match: TRM13_MOUSE (tRNA:m(4)X modification enzyme TRM13 homolog OS=Mus musculus GN=Trmt13 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-48
Identity = 148/493 (30.02%), Postives = 226/493 (45.84%), Query Frame = 1 

Query: 4   RCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGD----MVPCPVDPSHSVLRENLQGHVK 63
           RC +++ KK RFC +      +FCG H+  A+ +     + CP+DP H+V  + L  H+K
Sbjct: 18  RCNYFVEKKKRFCRMVAAAGKRFCGEHAGSAEEENTRKRILCPLDPKHTVYEDQLAKHLK 77

Query: 64  RCPLLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIV--YGMSGDQ 123
           +C     ++      F+ + INAG +D                +E+   +V    +S +Q
Sbjct: 78  KC----NSREKPKPDFFIQDINAGLKDE---------------TEIPEQLVPFSSLSEEQ 137

Query: 124 FHRLLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDE 183
              L+ K+R   + +    +D      A +  +     R      KH+ QQASILGN+++
Sbjct: 138 LENLIKKLRKASEGLNSTHEDHIMSHPALHDALNDP--RNGDCAVKHLKQQASILGNIEK 197

Query: 184 FGVLSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQM----LADCYGIKRVFLVE 243
             +L     G +R                VEFGAG+G L+      L D   +  + LVE
Sbjct: 198 LKLL-----GPRR--------------CFVEFGAGKGKLSHWVDIALKDAENVHFI-LVE 257

Query: 244 RKSYKLKADRSLRQKESLILERLRIDIEDLNLNAVESLRHN--PYLAIGKHLCGPATDLA 303
           R + + K D   R+K+S + ERL+IDI+ L LN V  LR    P + IGKHLCG ATD+A
Sbjct: 258 RVTTRFKVDGKHRKKDS-VFERLQIDIQHLCLNRVPVLREGRLPVVGIGKHLCGVATDVA 317

Query: 304 LRCCL-----------------------TKQPNHAVTEQCRDK------SKLRGLAIATC 363
           LRC +                       T++ ++ + ++  +K      + + G+ IA C
Sbjct: 318 LRCLVETYAASFEEKDEEPLAKRIKNDKTEKESNTLAKEGSEKDVPETWTPVAGIVIALC 377

Query: 364 CHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAV-DANHSEDISDVTDSKTFFQSSE 423
           CHH C W+HY  K Y   LG+   EF      +SWA      S + SDVT  +   Q  E
Sbjct: 378 CHHRCDWRHYVGKEYFKALGLGAVEFYYFQRMSSWATCGMRTSLEGSDVTPERKDAQRDE 437

Query: 424 NE-----SDGMIGCTVKDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQLVKYV 450
           NE      D +       +   +   E+  +G +CK +ID GRL +L++ G    L  Y 
Sbjct: 438 NEEHDDGGDRLTDGNTDSLPGILTVEEKKKIGHLCKLLIDQGRLQYLQQKGFSPALQYYT 468

[Close]
BLAST of CSPI07G18600 vs. Swiss-Prot
Match: TRM13_YEAST (tRNA:m(4)X modification enzyme TRM13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRM13 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-33
Identity = 125/504 (24.80%), Postives = 217/504 (43.06%), Query Frame = 1 

Query: 4   RCQFWLPKKNRFCAVAPINDSKFCGNH------------------SSRADGDMVPCPVDP 63
           +C++++ KK R C +   + + +C  H                   +  + + VPCP+DP
Sbjct: 20  QCEYFMEKKKRRCGMTRSSQNLYCSEHLNLMKKAANSQVHNKNGSEAEKERERVPCPLDP 79

Query: 64  SHSVLRENLQGHVKRCPLLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEM 123
           +H+V  + L+ H+K+C   K +     +P+Y+ G N              G +  +SS +
Sbjct: 80  NHTVWADQLKKHLKKCNKTKLSHLNDDKPYYEPGYN--------------GENGLLSSSV 139

Query: 124 KRNIVYGMSGDQFHRLLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHV 183
           K +I           L+  I  L+ +   +  D   +++  N  +  +   ++P   KH 
Sbjct: 140 KIDIT-------AEHLVQSIELLYKVFEGESMDELPLRQLNNKLMSLKRFPQLPSNTKHA 199

Query: 184 LQQASILGNLDEFGVLSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRG----------- 243
           +QQ+S++ NL + G         +R    ++          +EFG GR            
Sbjct: 200 VQQSSLIENLVDAGAF-------ERPESLNF----------IEFGCGRAEFSRYVSLYLL 259

Query: 244 -YLTQMLADCYG--IKRVFLVERKSYKLKADRSLRQKESLI-------------LERLRI 303
             LT + A+  G       L++R + ++K D+ ++   S I             ++R++I
Sbjct: 260 TQLTSLPAEHSGSNSNEFVLIDRATNRMKFDKKIKDDFSEIKSNSPSKPISCPSIKRIKI 319

Query: 304 DIEDLNLNAVESLRHNP-----YLAIGKHLCGPATDLALRCCLTKQPNHAVTEQCRDKSK 363
           DI DL ++ +  L+  P     Y+ I KHLCG ATDL LRC       H   +      K
Sbjct: 320 DIRDLKMDPI--LKSTPGDDIQYVCISKHLCGVATDLTLRCIGNSSILHG-DDNNGCNPK 379

Query: 364 LRGLAIATCCHHLCQWKHYTNKRYLLELG---------ITKEEFL-AITWFTSWAV-DAN 423
           L+ + IA CC H+C +  Y N+ Y+  L          +T E F   +T   SW      
Sbjct: 380 LKAICIAMCCRHVCDYGDYVNRSYVTSLVEKYRAHGSILTYETFFRVLTKLCSWGTCGRK 439

Query: 424 HSEDISDVTDSKTFFQSSENESDGMIGCTVKDIVKSMNPVERAVLGFMCKEIIDMGRLMW 445
               I+D+ +    F+ +E  +      T+K         ER  +G M + +ID GRL++
Sbjct: 440 PGTAITDIVNVVESFEGAEPYT-----ITIK---------ERENIGLMARRVIDEGRLVY 468

[Close]
BLAST of CSPI07G18600 vs. Swiss-Prot
Match: TRM13_ASHGO (tRNA:m(4)X modification enzyme TRM13 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TRM13 PE=3 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-32
Identity = 126/495 (25.45%), Postives = 199/495 (40.20%), Query Frame = 1 

Query: 3   SRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDM--VPCPVDPSHSVLRENLQGHVKR 62
           +RC F+LP+K R C +AP   ++FC  H     G    VPCP+DP H+V +  L+ H+ R
Sbjct: 21  ARCAFYLPRKRRSCGMAPKAGARFCAEHQPGDSGTAARVPCPLDPRHTVAKAQLRSHLAR 80

Query: 63  CPLLKQTQSLAGQ----PFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGD 122
           C   KQ Q+L  +    P+Y+ G+N       S+  P +  +D  + +            
Sbjct: 81  CNRTKQDQALRAEREHMPWYEAGVN-------SAARPAAAAADEATLQA----------- 140

Query: 123 QFHRLLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLD 182
               ++  I  L  +   + +   ++    N  ++     ++P   KH LQQ+S++ +L 
Sbjct: 141 ---AVMRAIPVLAQIAEAEFRAPLRVAVLSNAQVEHVRFPQLPSNRKHALQQSSLIQHLR 200

Query: 183 EFGVLSNYDGGEQREGDRSYGNDANVVP----AVVEFGAGRGYLTQMLADCYGIKRV--- 242
           E G+                     V P    A VEFG GRG L++ +     ++++   
Sbjct: 201 EAGLW--------------------VAPERPVAYVEFGCGRGELSRYINQAAVLEQLERG 260

Query: 243 --------FLVERKSYKLKADRSLR-----------------QKESLILERLRIDIEDLN 302
                    LV+R   ++K D                     ++ +  + R +IDI DL 
Sbjct: 261 GPAAPPAFVLVDRACPRMKFDSKFAEDVAELHARFCPSVPPDERPAPAVTRKKIDIRDLR 320

Query: 303 LNAVES--LRHNPYLAIGKHLCGPATDLALRCCLTKQPNHAVTEQCRDKSKLRGLAIATC 362
           L A+ S  L H   +A+ KHLCG ATDL LR CL   P          ++ L G  IA C
Sbjct: 321 LAALLSPGLEH---IAVSKHLCGVATDLTLR-CLAAGP----------RASLCGALIAMC 380

Query: 363 CHHLCQWKHYTNKRYLLELGITKEE-------FLAITWFTSWAVDANHSEDISDVTDSKT 422
           C H C    Y N  Y+  L             FLA+    SWAV                
Sbjct: 381 CRHACNPAEYANPAYVEALLARHAPDMSYDLFFLALMKMASWAVSGRR------------ 439

Query: 423 FFQSSENESDGMIGCTVKDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQLVKY 451
                     G+    V      +   ER  LG + + ++D GR  +  + G + +L+ Y
Sbjct: 441 ---------PGVPDTEVGGHFSGLAIAERERLGHLARRLVDEGRRQYFADLGYDAELLVY 439

[Close]
BLAST of CSPI07G18600 vs. Swiss-Prot
Match: TRM13_VANPO (tRNA:m(4)X modification enzyme TRM13 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TRM13 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.9e-32
Identity = 126/479 (26.30%), Postives = 212/479 (44.26%), Query Frame = 1 

Query: 4   RCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDM-VPCPVDPSHSVLRENLQGHVKRCP 63
           +C+F++ KK R C ++    SK+C  H    +    +PCP+DP+H+V   +L  H+K+C 
Sbjct: 11  QCEFYMEKKKRRCGMSRNLSSKYCSEHQILNENTKRIPCPLDPNHTVWESDLDSHLKKCN 70

Query: 64  LLKQTQSLAGQPFYQKGINA-GEEDSMSSNGPHSGLSDSISSEMK--RNIVYGMSGDQFH 123
            LK       +P++ K  NA   EDS ++      L + I   +   +N       +   
Sbjct: 71  KLKLIHQHDNKPYFLKDCNAITTEDSNTTVITKDSLQNWIMKTIPVLKNFFKDDEKNYLS 130

Query: 124 RLLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFG 183
            +   IR  H +  K      ++ E  N+            ++ H +QQ+S++ N+ +  
Sbjct: 131 NVPLDIRKNHTMEDKRFP---QLNENDNIG-----------KKYHAIQQSSLIQNMIDRN 190

Query: 184 VLSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRG----YLTQMLADCYGIK----RVFL 243
           +L   +               N +   +EFG GR     Y+ Q++      K       L
Sbjct: 191 ILQFKE---------------NSLANFIEFGCGRAELSRYVNQVVIKNSEEKIYNPHFIL 250

Query: 244 VERKSYKLKADRSLRQKESL---------ILERLRIDIEDLNLNAVESLRHNPYLAIGKH 303
           ++R + ++K D  ++ K++L          + R+RIDI+DL ++ +   + + Y+AI KH
Sbjct: 251 IDRSTNRMKFDTKMK-KDALEFNQNLNPPTITRIRIDIKDLKIDPLLQ-KDSKYIAISKH 310

Query: 304 LCGPATDLALRCCLTKQPNHAVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLE-L 363
           LCG ATDL LR  LT  P+        D   L+G+ IA CC H+C   +Y N  ++   +
Sbjct: 311 LCGVATDLTLR-SLTYNPD--------DNDFLQGVCIAMCCRHVCNSNNYVNPDFVKSII 370

Query: 364 GITKEE--------FLAITWFTSWAVDANHSEDISDVTDSKTFFQSSENESDGMIGCTVK 423
           G T  E        F A+T   +WA   +                S EN +         
Sbjct: 371 GNTNTEEQLPYDQFFHALTKIAAWATSGDRPT------------SSDENNTH-------- 427

Query: 424 DIVKSMNPVERAVLGFMCKEIIDMGRLMWLKEC---GLETQLVKYVPSTISPENHLLIA 450
               ++   ER  LG M + +ID GR  WL++      + +L++YV  +IS EN  L+A
Sbjct: 431 --FTNLPYTERQELGLMARRVIDQGRCDWLQQKLGESFKVELIRYVEPSISLENVALLA 427

[Close]
BLAST of CSPI07G18600 vs. Swiss-Prot
Match: TRM13_KLULA (tRNA:m(4)X modification enzyme TRM13 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TRM13 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-32
Identity = 125/478 (26.15%), Postives = 202/478 (42.26%), Query Frame = 1 

Query: 4   RCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKRCPL 63
           +C+F+L KK R C +     S+FC  HS+  D D VPCP+DPSH+V    ++ H+++C  
Sbjct: 19  QCEFFLVKKKRQCGMTRRAGSQFCSEHST--DSDRVPCPLDPSHTVCLSKMRVHMRKCNK 78

Query: 64  LKQTQSLAGQ----PFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFH 123
            +   S   +    P++++G+N+       S      L  S+S  + + I     GD   
Sbjct: 79  FRHDVSYQAKQREIPWFKEGLNSISNGKSDSKPADETLVKSVS--LIQKIFQNEFGD--- 138

Query: 124 RLLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFG 183
                            +    + E  N  ++     K     KH  QQ+S++ +L E  
Sbjct: 139 -----------------EPPLPLIEKQNELLERTERYKTLVNRKHARQQSSLIQHLKESK 198

Query: 184 VLSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKR----------- 243
           +  + +               N     +E G GR   ++ +     + +           
Sbjct: 199 LWPSLESCA-----------VNKTLEYIELGCGRAEFSRYVNIATNLDQKEHSHEKPEYK 258

Query: 244 -----VFLVERKSYKLKADRSLRQK--ESLILERLRIDIEDLNLNAVESLRHNPYLAIGK 303
                  L++R S +L+ D          + + R +IDI+DL L+AV     + Y+AI K
Sbjct: 259 AVAPSFTLIDRASQRLRFDNKFSSDIGTEVQIRREKIDIKDLRLDAVLH-DASQYVAISK 318

Query: 304 HLCGPATDLALRCCLTKQPNHAVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLEL 363
           HLCG ATDL+LRC L        +++C  K+ LRG+ IA CC H+CQ   Y N+ Y+   
Sbjct: 319 HLCGVATDLSLRCLLN-------SDKC--KANLRGILIAMCCRHVCQSSEYVNQEYI--K 378

Query: 364 GITK----------EEFLAITWFTSWAVDANHSEDISDVTDSKTFFQSSENESDGMIGCT 423
           G+ K          E F  +  F S+        D+   + S                  
Sbjct: 379 GLLKRQTDGSMAYSEFFQCLKKFCSYCT-CGLRPDMDPNSGS------------------ 429

Query: 424 VKDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSTISPENHLLIA 450
            +D +  +   ER  +G M + IID GR  +L+  G ET L KY  S ++ E+  L+A
Sbjct: 439 -EDHITKLTHNERQRIGHMARRIIDEGRAQFLQSKGFETVLFKYTDSAVTLEDTALLA 429

[Close]
BLAST of CSPI07G18600 vs. TrEMBL
Match: A0A0A0K9L5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G419580 PE=4 SV=1)

HSP 1 Score: 938.7 bits (2425), Expect = 2.6e-270
Identity = 454/458 (99.13%), Postives = 455/458 (99.34%), Query Frame = 1 

Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60
           MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR
Sbjct: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60

Query: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHR 120
           CPLLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHR
Sbjct: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHR 120

Query: 121 LLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV 180
           LLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV
Sbjct: 121 LLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV 180

Query: 181 LSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           LSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK
Sbjct: 181 LSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 300
           ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP
Sbjct: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 300

Query: 301 NHAVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 360
           NHAVTE+CRDKSKLRGLAIATCCHHLCQW HYTNKRYLLELGITKEEFLAITWFTSWAVD
Sbjct: 301 NHAVTERCRDKSKLRGLAIATCCHHLCQWNHYTNKRYLLELGITKEEFLAITWFTSWAVD 360

Query: 361 ANHSEDISDVTDSKTFFQSSENESDGMIGCTVKDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISDVTDSKTFFQSSENESDGMIGC VKDIVKSMNPVERAVLGFMCKEIIDMGRL
Sbjct: 361 ANHSEDISDVTDSKTFFQSSENESDGMIGCMVKDIVKSMNPVERAVLGFMCKEIIDMGRL 420

Query: 421 MWLKECGLETQLVKYVPSTISPENHLLIAKCSRHSCAT 459
           MWLKECGLETQLVKYVPSTISPENHLLIAKCSRH CAT
Sbjct: 421 MWLKECGLETQLVKYVPSTISPENHLLIAKCSRHICAT 458

[Close]
BLAST of CSPI07G18600 vs. TrEMBL
Match: A0A061DRF5_THECC (Methyltransferases isoform 1 OS=Theobroma cacao GN=TCM_004906 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 2.8e-179
Identity = 315/462 (68.18%), Postives = 368/462 (79.65%), Query Frame = 1 

Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60
           M +RC+FWLPKKNRFCA AP+++S FCGNH+ R  G  +PCP+DPSHSVL+ENL+GHV+R
Sbjct: 1   MENRCKFWLPKKNRFCANAPLHNSSFCGNHTPRTAGQWIPCPIDPSHSVLQENLEGHVRR 60

Query: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSMSSNG---PHSGLSDSISSEMKRNIVYGMSGDQ 120
           CPLLKQ QSL+ QPFYQKG+NAG++D         P SG  D+++SEMKRN +Y ++  Q
Sbjct: 61  CPLLKQVQSLSTQPFYQKGVNAGKDDEQKEPETLIPTSGSFDNVTSEMKRNALYSLNISQ 120

Query: 121 FHRLLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDE 180
           F  L+ KI ++H  ICKDI+DSYKI EAC +WIK E+DRK+PFQEKHV+QQASILGNL+E
Sbjct: 121 FFDLIRKIESVHAQICKDIKDSYKIPEACGIWIKREVDRKLPFQEKHVMQQASILGNLEE 180

Query: 181 FGVLSNYDGGEQ-REGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKS 240
           FGVL + DG EQ  + +     D+N VPAVVEFGAGRGYLTQMLADCYGI RVFLVERKS
Sbjct: 181 FGVLESSDGKEQCGDAEVEQVEDSNGVPAVVEFGAGRGYLTQMLADCYGIGRVFLVERKS 240

Query: 241 YKLKADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCL 300
           YKLKADRSLRQKESLILERLRIDIEDLNLNAVESL+  PY+AIGKHLCGPATDL LRCCL
Sbjct: 241 YKLKADRSLRQKESLILERLRIDIEDLNLNAVESLQGLPYVAIGKHLCGPATDLTLRCCL 300

Query: 301 TKQPNHAVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTS 360
             Q N    ++CR    LRGLA+ATCCHHLCQWKHY NK+YL  LGI+KEEF AITWFTS
Sbjct: 301 ANQRN---DDRCRGNCHLRGLAVATCCHHLCQWKHYINKKYLTHLGISKEEFHAITWFTS 360

Query: 361 WAVDANHSEDISDVTDSKTFFQSSENESDGMIGCT--VKDIVKSMNPVERAVLGFMCKEI 420
           WAVDA+H  D+SDVTD K    S  +E +   G    V+ + ++M  +ERA LGFMCK+I
Sbjct: 361 WAVDADHGSDLSDVTDFKLHPDSIGSEKEEYSGDANGVEGMARNMKAIERAKLGFMCKQI 420

Query: 421 IDMGRLMWLKECGLETQLVKYVPSTISPENHLLIAKCSRHSC 457
           IDMGRLMW+KE GL TQLVKYVP+TISPENHLLIA   RH C
Sbjct: 421 IDMGRLMWVKEHGLVTQLVKYVPATISPENHLLIA---RHVC 456

[Close]
BLAST of CSPI07G18600 vs. TrEMBL
Match: M5X9W5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005383mg PE=4 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 1.8e-178
Identity = 312/469 (66.52%), Postives = 363/469 (77.40%), Query Frame = 1 

Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60
           M +RC+FWLPKK RFCA  P+N+S FCGNH+ R+D   +PCP+DPSHSVL+ENL+GHV+R
Sbjct: 1   METRCKFWLPKKKRFCANIPLNESLFCGNHTPRSDSQWIPCPIDPSHSVLKENLEGHVRR 60

Query: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSM---------------SSNGPHSGLSDSISSEM 120
           CPLLKQ Q L  QPFYQKGINAG+E+                 SSN P  G  D+I SEM
Sbjct: 61  CPLLKQVQYLTLQPFYQKGINAGKEEDQEELETFRPKGADGLESSNDPALGSLDNILSEM 120

Query: 121 KRNIVYGMSGDQFHRLLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHV 180
           KRN VY M+   F++L+ KI  +H+ ICKDIQDSYK+ EAC +WIK E+DRK+PFQEKHV
Sbjct: 121 KRNAVYSMTVLDFYKLIEKIEHVHESICKDIQDSYKVPEACGIWIKREVDRKLPFQEKHV 180

Query: 181 LQQASILGNLDEFGVLSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYG 240
           +QQ SILGNL+  GVL +  G E+ + D     D   +PAVVEFGAGRGYLTQMLADCYG
Sbjct: 181 MQQVSILGNLEGLGVLKSSLGKERADYD-----DGTGIPAVVEFGAGRGYLTQMLADCYG 240

Query: 241 IKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCG 300
           IK+VFLVERKSYKLKADRSLRQKESLIL+RLRIDIEDLNLNAVESLR +PYLAIGKHLCG
Sbjct: 241 IKKVFLVERKSYKLKADRSLRQKESLILQRLRIDIEDLNLNAVESLREDPYLAIGKHLCG 300

Query: 301 PATDLALRCCLTKQPNHAVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITK 360
           PATDL LRCCL +  N +  E       LRGLAIATCCHHLCQWKHY NK+YLLELGITK
Sbjct: 301 PATDLTLRCCLGEHSNQSNAELNSVNPNLRGLAIATCCHHLCQWKHYINKKYLLELGITK 360

Query: 361 EEFLAITWFTSWAVDANHSEDISDVTDSKTFFQSSENESDGMIGCTVKDIVKSMNPVERA 420
           EEF AITWFTSWAVDA+H  D+ DVTD K   +S E +  G     V++IV++M  VERA
Sbjct: 361 EEFHAITWFTSWAVDADHGADLPDVTDCKLHLESIEKKQCGE-DYGVEEIVRNMKAVERA 420

Query: 421 VLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSTISPENHLLIAKCSRH 455
           VLGFMCK+IIDMGRLMW+KE GL+ + VKYVPS++SPENHLLI +C  H
Sbjct: 421 VLGFMCKKIIDMGRLMWMKEHGLDARFVKYVPSSVSPENHLLIGRCPNH 463

[Close]
BLAST of CSPI07G18600 vs. TrEMBL
Match: B9GSY8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s19050g PE=4 SV=2)

HSP 1 Score: 630.6 bits (1625), Expect = 1.5e-177
Identity = 300/448 (66.96%), Postives = 360/448 (80.36%), Query Frame = 1 

Query: 3   SRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKRCP 62
           +RC+FWLPKKNRFCA +P+NDS+FCGNH  R+    +PCP+DPSHSVL+ENL+ HVKRCP
Sbjct: 4   NRCKFWLPKKNRFCANSPLNDSQFCGNHKPRSTEQWIPCPIDPSHSVLKENLESHVKRCP 63

Query: 63  LLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHRLL 122
           LLKQ QSL+ QPFYQKGINAG+E+            D++SSEMKR+ VY M+  QF +L+
Sbjct: 64  LLKQAQSLSLQPFYQKGINAGKEEEEE---------DNVSSEMKRSAVYSMTVTQFCKLI 123

Query: 123 GKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGVLS 182
            KI ++H   CKDI +SYK+ EACNMWIK E+DRK+PFQEKHV QQASILGNL++FGV+ 
Sbjct: 124 NKIESVHASTCKDIWESYKVPEACNMWIKREVDRKLPFQEKHVAQQASILGNLEDFGVIK 183

Query: 183 NYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKAD 242
           +  G ++ +      +D+N V AVVEFGAGRGYLTQMLADCYG  RVFLVERKSYKLKAD
Sbjct: 184 SSVGSKEADSQGFCSDDSNFVHAVVEFGAGRGYLTQMLADCYGFDRVFLVERKSYKLKAD 243

Query: 243 RSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQPNH 302
           RSLRQKESLILERLRIDIEDLNLNAVESLR  PYLAIGKHLCGPATDL LRCCL++Q N 
Sbjct: 244 RSLRQKESLILERLRIDIEDLNLNAVESLRGIPYLAIGKHLCGPATDLTLRCCLSEQCNQ 303

Query: 303 AVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDAN 362
              + CR  + L+GLAIATCCHHLCQWKHYTN++++ +LGITK +F A+TWFTSWAVDA+
Sbjct: 304 GSVQDCRSNANLKGLAIATCCHHLCQWKHYTNRKFMSDLGITKGQFHAMTWFTSWAVDAD 363

Query: 363 HSEDISDVTDSKTFFQSSENESDGMIGCTVKDIVKSMNPVERAVLGFMCKEIIDMGRLMW 422
           HS D+ D+TD     QS E +        V+D+V++M PVERAVLGF CK+IID+GR+MW
Sbjct: 364 HSSDLPDITDCSLQLQSIEEKQCFWDMHGVEDVVRNMKPVERAVLGFKCKQIIDVGRMMW 423

Query: 423 LKECGLETQLVKYVPSTISPENHLLIAK 451
            KE GL+TQLVKYVPS ISPENHLL+A+
Sbjct: 424 AKEHGLDTQLVKYVPSGISPENHLLLAR 442

[Close]
BLAST of CSPI07G18600 vs. TrEMBL
Match: F6HZD6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02140 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 2.2e-176
Identity = 312/462 (67.53%), Postives = 363/462 (78.57%), Query Frame = 1 

Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60
           M +RC FWLPKK RFCA   INDS FCGNH++R+D + VPCP+DPSHSVL ENL+GH+KR
Sbjct: 1   MENRCSFWLPKKKRFCANFRINDSVFCGNHNTRSDAEWVPCPIDPSHSVLSENLEGHMKR 60

Query: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSMSSN-----GPHSGLSDSISSEMKRNIVYGMSG 120
           CPLLKQ QSL+ QPFYQKGIN G++D    +      P     ++ +S MKRN VY M+ 
Sbjct: 61  CPLLKQAQSLSSQPFYQKGINGGKDDEDEGDEKGAAAPTLASLENATSLMKRNAVYSMTV 120

Query: 121 DQFHRLLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNL 180
            +F  L+ KI+++H  I  DI+DSY++ EAC++WIK E+DRK+PFQEKHV+QQASILGNL
Sbjct: 121 PEFSILISKIQSIHSSIRNDIRDSYRVPEACDIWIKREVDRKLPFQEKHVVQQASILGNL 180

Query: 181 DEFGVLSNYDGGEQRE---GDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLV 240
           +EFGVL    G +Q E    DRS G+D N VPAVVEFGAGRGYLTQMLADCYGIKRVFLV
Sbjct: 181 EEFGVLEKSSGDDQMEQCDSDRSSGDD-NGVPAVVEFGAGRGYLTQMLADCYGIKRVFLV 240

Query: 241 ERKSYKLKADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLAL 300
           ERKSYKLKADRSLRQKESLILERLRIDIEDLNL AVESL+  PYLAIGKHLCGPATDL+L
Sbjct: 241 ERKSYKLKADRSLRQKESLILERLRIDIEDLNLKAVESLQGVPYLAIGKHLCGPATDLSL 300

Query: 301 RCCLTKQPNHAVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAIT 360
           RCCL ++ N     QC     LRGLAIATCCHHLCQWKHY NK+YL+ LGITK++F AIT
Sbjct: 301 RCCLAEESNQDDAVQCCSGHYLRGLAIATCCHHLCQWKHYINKKYLMNLGITKDDFHAIT 360

Query: 361 WFTSWAVDANHSEDISDVTDSKTFFQSSENESDGMIGCTVKDIVKSMNPVERAVLGFMCK 420
           WFTSWAVDA+H  D+SDV   +   QS E +        V +IV++M  +ERAV+GFMCK
Sbjct: 361 WFTSWAVDADHGSDLSDVAGCRLHLQSIEKKECVEDVGGVAEIVQNMKAMERAVVGFMCK 420

Query: 421 EIIDMGRLMWLKECGLETQLVKYVPSTISPENHLLIAKCSRH 455
           EIIDMGRLMW+KE GLETQLVKYVP TISPENHLLIAK + H
Sbjct: 421 EIIDMGRLMWVKEHGLETQLVKYVPPTISPENHLLIAKHANH 461

[Close]
BLAST of CSPI07G18600 vs. TAIR10
Match: AT4G01880.1 (AT4G01880.1 methyltransferases)

HSP 1 Score: 554.7 bits (1428), Expect = 5.4e-158
Identity = 278/453 (61.37%), Postives = 337/453 (74.39%), Query Frame = 1 

Query: 2   ASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKRC 61
           ++RC FWLPKK R CA   I  S FCGNHS R +G  +PCP+DPSHSVL+ENL+ HVKRC
Sbjct: 6   SNRCSFWLPKKKRSCANTRIESSMFCGNHSQRLEGQWIPCPIDPSHSVLQENLEWHVKRC 65

Query: 62  PLLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHRL 121
           PLLKQT  L+GQ FYQKGINAG ++     G  S     ++SEMKRN++Y MS  +FH+L
Sbjct: 66  PLLKQTVELSGQRFYQKGINAGNDEEEEKMGSCS----LVTSEMKRNLLYSMSVSKFHQL 125

Query: 122 LGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGVL 181
           + KI  +H  ICKDI+DSY   EACN+W   EIDRK+PFQEKHVLQQ SILGNL+E GVL
Sbjct: 126 IKKIEDVHGGICKDIEDSYLSPEACNIWFNKEIDRKLPFQEKHVLQQGSILGNLEEIGVL 185

Query: 182 SNYD-GGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 241
              +   E  E D    +D N  PAVVEFGAGRGYLTQMLADCYGIK+V+LVERKSYKLK
Sbjct: 186 KRCNINVECCESDLEEKDD-NTAPAVVEFGAGRGYLTQMLADCYGIKKVYLVERKSYKLK 245

Query: 242 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 301
           ADRSLRQKESL+LER+RIDIEDLNLNAVESL   PY+A+GKHLCGPATDL+LRCCL++Q 
Sbjct: 246 ADRSLRQKESLVLERMRIDIEDLNLNAVESLHGVPYVAVGKHLCGPATDLSLRCCLSRQD 305

Query: 302 NHAVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 361
                    +   LRGLAIATCCHHL QWK Y NK Y+L LGI+K+EF  +T FTSWAVD
Sbjct: 306 G--------ESPVLRGLAIATCCHHLSQWKSYINKEYILSLGISKDEFHIMTSFTSWAVD 365

Query: 362 ANHSEDISDVTDSKTFFQSSENESDGMIG----CTVKDIVKSMNPVERAVLGFMCKEIID 421
            +H   +  V D      +++ E +G +      +V+++VK M P+ERAVLGF CK+IID
Sbjct: 366 DDHGSKLPGVDDIDLLDSNAKEEEEGEVRDASLISVEEVVKKMKPMERAVLGFKCKQIID 425

Query: 422 MGRLMWLKECGLETQLVKYVPSTISPENHLLIA 450
            GR+ W+K+ GL ++LVKY+P++ISPEN LLIA
Sbjct: 426 AGRMKWVKKHGLNSKLVKYIPASISPENTLLIA 445

[Close]
BLAST of CSPI07G18600 vs. NCBI nr
Match: gi|449436371|ref|XP_004135966.1| (PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 938.7 bits (2425), Expect = 3.8e-270
Identity = 454/458 (99.13%), Postives = 455/458 (99.34%), Query Frame = 1 

Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60
           MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR
Sbjct: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60

Query: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHR 120
           CPLLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHR
Sbjct: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHR 120

Query: 121 LLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV 180
           LLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV
Sbjct: 121 LLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV 180

Query: 181 LSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           LSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK
Sbjct: 181 LSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 300
           ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP
Sbjct: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 300

Query: 301 NHAVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 360
           NHAVTE+CRDKSKLRGLAIATCCHHLCQW HYTNKRYLLELGITKEEFLAITWFTSWAVD
Sbjct: 301 NHAVTERCRDKSKLRGLAIATCCHHLCQWNHYTNKRYLLELGITKEEFLAITWFTSWAVD 360

Query: 361 ANHSEDISDVTDSKTFFQSSENESDGMIGCTVKDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISDVTDSKTFFQSSENESDGMIGC VKDIVKSMNPVERAVLGFMCKEIIDMGRL
Sbjct: 361 ANHSEDISDVTDSKTFFQSSENESDGMIGCMVKDIVKSMNPVERAVLGFMCKEIIDMGRL 420

Query: 421 MWLKECGLETQLVKYVPSTISPENHLLIAKCSRHSCAT 459
           MWLKECGLETQLVKYVPSTISPENHLLIAKCSRH CAT
Sbjct: 421 MWLKECGLETQLVKYVPSTISPENHLLIAKCSRHICAT 458

[Close]
BLAST of CSPI07G18600 vs. NCBI nr
Match: gi|659122910|ref|XP_008461388.1| (PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 912.5 bits (2357), Expect = 2.9e-262
Identity = 444/458 (96.94%), Postives = 450/458 (98.25%), Query Frame = 1 

Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60
           MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR
Sbjct: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60

Query: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHR 120
           CPLLKQTQSLAGQPFYQKGINAGEEDSMS+NGP SGLSDSISSEMKRNIVYGMSGDQFHR
Sbjct: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSMSANGPDSGLSDSISSEMKRNIVYGMSGDQFHR 120

Query: 121 LLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV 180
           LLGKIRALHDLICKDIQDSY+IKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV
Sbjct: 121 LLGKIRALHDLICKDIQDSYQIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV 180

Query: 181 LSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           L NYDGG+QREG+RSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK
Sbjct: 181 LRNYDGGQQREGNRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 300
           ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP
Sbjct: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 300

Query: 301 NHAVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 360
           N A TEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD
Sbjct: 301 NQADTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 360

Query: 361 ANHSEDISDVTDSKTFFQSSENESDGMIGCTVKDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISDVTDSKTF QSSENESDGMIGCTV +IVKSMNPVERAVLGFMCKEIIDMGRL
Sbjct: 361 ANHSEDISDVTDSKTFLQSSENESDGMIGCTVDEIVKSMNPVERAVLGFMCKEIIDMGRL 420

Query: 421 MWLKECGLETQLVKYVPSTISPENHLLIAKCSRHSCAT 459
           MWLKECGLETQLVKYVPSTISPENHLLIAKC R+ CAT
Sbjct: 421 MWLKECGLETQLVKYVPSTISPENHLLIAKC-RNICAT 457

[Close]
BLAST of CSPI07G18600 vs. NCBI nr
Match: gi|778728384|ref|XP_011659414.1| (PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 753.4 bits (1944), Expect = 2.3e-214
Identity = 367/371 (98.92%), Postives = 368/371 (99.19%), Query Frame = 1 

Query: 88  MSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHRLLGKIRALHDLICKDIQDSYKIKEACN 147
           MSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHRLLGKIRALHDLICKDIQDSYKIKEACN
Sbjct: 1   MSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHRLLGKIRALHDLICKDIQDSYKIKEACN 60

Query: 148 MWIKGEIDRKIPFQEKHVLQQASILGNLDEFGVLSNYDGGEQREGDRSYGNDANVVPAVV 207
           MWIKGEIDRKIPFQEKHVLQQASILGNLDEFGVLSNYDGGEQREGDRSYGNDANVVPAVV
Sbjct: 61  MWIKGEIDRKIPFQEKHVLQQASILGNLDEFGVLSNYDGGEQREGDRSYGNDANVVPAVV 120

Query: 208 EFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNA 267
           EFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNA
Sbjct: 121 EFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNA 180

Query: 268 VESLRHNPYLAIGKHLCGPATDLALRCCLTKQPNHAVTEQCRDKSKLRGLAIATCCHHLC 327
           VESLRHNPYLAIGKHLCGPATDLALRCCLTKQPNHAVTE+CRDKSKLRGLAIATCCHHLC
Sbjct: 181 VESLRHNPYLAIGKHLCGPATDLALRCCLTKQPNHAVTERCRDKSKLRGLAIATCCHHLC 240

Query: 328 QWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTDSKTFFQSSENESDGM 387
           QW HYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTDSKTFFQSSENESDGM
Sbjct: 241 QWNHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTDSKTFFQSSENESDGM 300

Query: 388 IGCTVKDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSTISPENHLL 447
           IGC VKDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSTISPENHLL
Sbjct: 301 IGCMVKDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSTISPENHLL 360

Query: 448 IAKCSRHSCAT 459
           IAKCSRH CAT
Sbjct: 361 IAKCSRHICAT 371

[Close]
BLAST of CSPI07G18600 vs. NCBI nr
Match: gi|659122912|ref|XP_008461389.1| (PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 727.2 bits (1876), Expect = 1.7e-206
Identity = 357/371 (96.23%), Postives = 363/371 (97.84%), Query Frame = 1 

Query: 88  MSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHRLLGKIRALHDLICKDIQDSYKIKEACN 147
           MS+NGP SGLSDSISSEMKRNIVYGMSGDQFHRLLGKIRALHDLICKDIQDSY+IKEACN
Sbjct: 1   MSANGPDSGLSDSISSEMKRNIVYGMSGDQFHRLLGKIRALHDLICKDIQDSYQIKEACN 60

Query: 148 MWIKGEIDRKIPFQEKHVLQQASILGNLDEFGVLSNYDGGEQREGDRSYGNDANVVPAVV 207
           MWIKGEIDRKIPFQEKHVLQQASILGNLDEFGVL NYDGG+QREG+RSYGNDANVVPAVV
Sbjct: 61  MWIKGEIDRKIPFQEKHVLQQASILGNLDEFGVLRNYDGGQQREGNRSYGNDANVVPAVV 120

Query: 208 EFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNA 267
           EFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNA
Sbjct: 121 EFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNA 180

Query: 268 VESLRHNPYLAIGKHLCGPATDLALRCCLTKQPNHAVTEQCRDKSKLRGLAIATCCHHLC 327
           VESLRHNPYLAIGKHLCGPATDLALRCCLTKQPN A TEQCRDKSKLRGLAIATCCHHLC
Sbjct: 181 VESLRHNPYLAIGKHLCGPATDLALRCCLTKQPNQADTEQCRDKSKLRGLAIATCCHHLC 240

Query: 328 QWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTDSKTFFQSSENESDGM 387
           QWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTDSKTF QSSENESDGM
Sbjct: 241 QWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTDSKTFLQSSENESDGM 300

Query: 388 IGCTVKDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSTISPENHLL 447
           IGCTV +IVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSTISPENHLL
Sbjct: 301 IGCTVDEIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSTISPENHLL 360

Query: 448 IAKCSRHSCAT 459
           IAKC R+ CAT
Sbjct: 361 IAKC-RNICAT 370

[Close]
BLAST of CSPI07G18600 vs. NCBI nr
Match: gi|645243042|ref|XP_008227801.1| (PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog [Prunus mume])

HSP 1 Score: 644.0 bits (1660), Expect = 1.9e-181
Identity = 317/469 (67.59%), Postives = 367/469 (78.25%), Query Frame = 1 

Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60
           M  RC+FWLPKK RFCA  P+N+S FCGNH+ R+D   +PCP+DPSHSVL+ENL+GHV+R
Sbjct: 1   MEIRCKFWLPKKKRFCANIPLNESLFCGNHTPRSDSPWIPCPIDPSHSVLKENLEGHVRR 60

Query: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSM---------------SSNGPHSGLSDSISSEM 120
           CPLLKQ QSL  QPFYQKGINAG+E+                 SSN P SG  D+I SEM
Sbjct: 61  CPLLKQVQSLTLQPFYQKGINAGKEEDQEELETFKPKGADDLESSNDPESGSLDNILSEM 120

Query: 121 KRNIVYGMSGDQFHRLLGKIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHV 180
           KRN VY M+   F++L+ KI  +H+ ICKDIQDSYK+ EAC +WIK E+DRK+PFQEKHV
Sbjct: 121 KRNAVYSMTVLDFYKLIEKIEHVHESICKDIQDSYKVPEACGIWIKREVDRKLPFQEKHV 180

Query: 181 LQQASILGNLDEFGVLSNYDGGEQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYG 240
           +QQ SILGNL++ GVL++  G E+ + D     D   +PAVVEFGAGRGYLTQMLADCYG
Sbjct: 181 MQQVSILGNLEDLGVLNSSLGKERADYD-----DGTGIPAVVEFGAGRGYLTQMLADCYG 240

Query: 241 IKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCG 300
           IK+VFLVERKSYKLKADRSLRQKESLIL+RLRIDIEDLNLNAVESLR +PYLAIGKHLCG
Sbjct: 241 IKKVFLVERKSYKLKADRSLRQKESLILQRLRIDIEDLNLNAVESLREDPYLAIGKHLCG 300

Query: 301 PATDLALRCCLTKQPNHAVTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITK 360
           PATDL LRCCL +  N +  E       LRGLAIATCCHHLCQWKHY NK+YLLELGITK
Sbjct: 301 PATDLTLRCCLGEHRNQSNAELQSVNPNLRGLAIATCCHHLCQWKHYINKKYLLELGITK 360

Query: 361 EEFLAITWFTSWAVDANHSEDISDVTDSKTFFQSSENESDGMIGCTVKDIVKSMNPVERA 420
           EEF AITWFTSWAVDA+H  D+ DVTD K   +S E +  G     V+DIV++M  VERA
Sbjct: 361 EEFHAITWFTSWAVDADHGADLPDVTDCKLHLESVEKKQCGE-DYGVEDIVRNMKAVERA 420

Query: 421 VLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSTISPENHLLIAKCSRH 455
           VLGFMCK+IIDMGRLMW+KE GL+ Q VKYVPS++SPENHLLI +C RH
Sbjct: 421 VLGFMCKKIIDMGRLMWMKEHGLDAQFVKYVPSSVSPENHLLIGRCPRH 463

The following BLAST results are available for this feature:
BLAST of CSPI07G18600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRM13_MOUSE1.1e-4830.02tRNA:m(4)X modification enzyme TRM13 homolog OS=Mus musculus GN=Trmt13 PE=2 SV=1[more]
TRM13_YEAST1.0e-3324.80tRNA:m(4)X modification enzyme TRM13 OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
TRM13_ASHGO1.1e-3225.45tRNA:m(4)X modification enzyme TRM13 OS=Ashbya gossypii (strain ATCC 10895 / CBS... [more]
TRM13_VANPO1.9e-3226.30tRNA:m(4)X modification enzyme TRM13 OS=Vanderwaltozyma polyspora (strain ATCC 2... [more]
TRM13_KLULA2.5e-3226.15tRNA:m(4)X modification enzyme TRM13 OS=Kluyveromyces lactis (strain ATCC 8585 /... [more]
BLAST of CSPI07G18600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9L5_CUCSA2.6e-27099.13Uncharacterized protein OS=Cucumis sativus GN=Csa_7G419580 PE=4 SV=1[more]
A0A061DRF5_THECC2.8e-17968.18Methyltransferases isoform 1 OS=Theobroma cacao GN=TCM_004906 PE=4 SV=1[more]
M5X9W5_PRUPE1.8e-17866.52Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005383mg PE=4 SV=1[more]
B9GSY8_POPTR1.5e-17766.96Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s19050g PE=4 SV=2[more]
F6HZD6_VITVI2.2e-17667.53Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02140 PE=4 SV=... [more]
BLAST of CSPI07G18600 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01880.15.4e-15861.37 methyltransferases[more]
BLAST of CSPI07G18600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436371|ref|XP_004135966.1|3.8e-27099.13PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 [Cucumis sati... [more]
gi|659122910|ref|XP_008461388.1|2.9e-26296.94PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 [Cucumis melo... [more]
gi|778728384|ref|XP_011659414.1|2.3e-21498.92PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X2 [Cucumis sati... [more]
gi|659122912|ref|XP_008461389.1|1.7e-20696.23PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X2 [Cucumis melo... [more]
gi|645243042|ref|XP_008227801.1|1.9e-18167.59PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007871Methyltransferase_TRM13
IPR021721Znf_CCCH-type_TRM13
IPR022776TRM13/UPF0224_CHHC_Znf_dom
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0008033 tRNA processing
biological_process GO:0030488 tRNA methylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0008168 methyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G18600.1CSPI07G18600.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007871Methyltransferase TRM13PFAMPF05206TRM13coord: 167..450
score: 2.6
IPR021721Zinc finger, CCCH-type, TRM13PFAMPF11722zf-TRM13_CCCHcoord: 4..30
score: 2.7
IPR022776TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domainPFAMPF05253zf-U11-48Kcoord: 38..62
score: 1.
NoneNo IPR availablePANTHERPTHR12998UNCHARACTERIZEDcoord: 1..454
score: 2.2E
NoneNo IPR availablePANTHERPTHR12998:SF0TRNA:M(4)X MODIFICATION ENZYME TRM13 HOMOLOGcoord: 1..454
score: 2.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G18600Cla015186Watermelon (97103) v1cpiwmB587
CSPI07G18600Csa7G419580Cucumber (Chinese Long) v2cpicuB354
CSPI07G18600MELO3C023610Melon (DHL92) v3.5.1cpimeB525
CSPI07G18600ClCG09G004700Watermelon (Charleston Gray)cpiwcgB555
CSPI07G18600Lsi02G025160Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G18600MELO3C023610.2Melon (DHL92) v3.6.1cpimedB512
CSPI07G18600CsaV3_7G030430Cucumber (Chinese Long) v3cpicucB414
CSPI07G18600Cla97C09G167040Watermelon (97103) v2cpiwmbB598
CSPI07G18600Bhi09G000619Wax gourdcpiwgoB716
CSPI07G18600Cucsa.128440Cucumber (Gy14) v1cgycpiB180
CSPI07G18600CmaCh17G010010Cucurbita maxima (Rimu)cmacpiB392
CSPI07G18600CmoCh17G009760Cucurbita moschata (Rifu)cmocpiB381
CSPI07G18600Cp4.1LG12g06410Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G18600CsGy7G017050Cucumber (Gy14) v2cgybcpiB331
CSPI07G18600Carg07092Silver-seed gourdcarcpiB0124
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G18600Cucurbita moschata (Rifu)cmocpiB266
CSPI07G18600Cucurbita moschata (Rifu)cmocpiB492
CSPI07G18600Cucurbita moschata (Rifu)cmocpiB913
CSPI07G18600Watermelon (Charleston Gray)cpiwcgB560
CSPI07G18600Watermelon (97103) v1cpiwmB593
CSPI07G18600Cucurbita pepo (Zucchini)cpecpiB344
CSPI07G18600Cucurbita pepo (Zucchini)cpecpiB637
CSPI07G18600Bottle gourd (USVL1VR-Ls)cpilsiB530
CSPI07G18600Silver-seed gourdcarcpiB0489
CSPI07G18600Silver-seed gourdcarcpiB0801
CSPI07G18600Silver-seed gourdcarcpiB0855
CSPI07G18600Watermelon (97103) v2cpiwmbB541
CSPI07G18600Wax gourdcpiwgoB658
CSPI07G18600Cucurbita maxima (Rimu)cmacpiB934
CSPI07G18600Cucurbita maxima (Rimu)cmacpiB276
CSPI07G18600Cucurbita maxima (Rimu)cmacpiB502