CSPI07G18310 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G18310
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 16378356 .. 16378746 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCATACAAGCAGAGATTTCAGCAAAGCAGGGTCCCATGATGTCAATGCCTATCCCTATACCTTTCACTGAATGGCTCCGTTGCAAGGCCTCGACCTCCCGAGCTACATCCATGGCATTGCAACCTTGTACTCCTTCGACAAAAAAGTGTGATCTTCGTAGTGGTTACAAATCAACACATTGCAGGCAGGTAGACATTCCTTTAAACTGCGAGCAAAATTTTCTTTACCATTCACTAACATTTCTACGAGGGTGATCTTGGCTATACCCTTTCATGTCAGTCATTTGCTGCAACGATGAACCTGCGACTCGAAATGAAAAGGTCGACATGGGATGCTTTCGTACATGTATCTGTAAAGATATTGCTGCAACTAAAGATAAAGTGTTGA

mRNA sequence

ATGATCATACAAGCAGAGATTTCAGCAAAGCAGGGTCCCATGATGTCAATGCCTATCCCTATACCTTTCACTGAATGGCTCCGTTGCAAGGCCTCGACCTCCCGAGCTACATCCATGGCATTGCAACCTTGTACTCCTTCGACAAAAAAGTGTGATCTTCGTAGTGGTTACAAATCAACACATTGCAGGCAGTCATTTGCTGCAACGATGAACCTGCGACTCGAAATGAAAAGGTCGACATGGGATGCTTTCGTACATGTATCTGTAAAGATATTGCTGCAACTAAAGATAAAGTGTTGA

Coding sequence (CDS)

ATGATCATACAAGCAGAGATTTCAGCAAAGCAGGGTCCCATGATGTCAATGCCTATCCCTATACCTTTCACTGAATGGCTCCGTTGCAAGGCCTCGACCTCCCGAGCTACATCCATGGCATTGCAACCTTGTACTCCTTCGACAAAAAAGTGTGATCTTCGTAGTGGTTACAAATCAACACATTGCAGGCAGTCATTTGCTGCAACGATGAACCTGCGACTCGAAATGAAAAGGTCGACATGGGATGCTTTCGTACATGTATCTGTAAAGATATTGCTGCAACTAAAGATAAAGTGTTGA
Homology
[Close]
BLAST of CSPI07G18310 vs. TrEMBL
Match: A0A0A0KB94_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G410340 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.2e-47
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 1 

Query: 1   MIIQAEISAKQGPMMSMPIPIPFTEWLRCKASTSRATSMALQPCTPSTKKCDLRSGYKST 60
           MIIQAEISAKQGPMMSMPIPIPFTEWLRCKASTSRATSMALQPCTPSTKKCDLRS YKST
Sbjct: 1   MIIQAEISAKQGPMMSMPIPIPFTEWLRCKASTSRATSMALQPCTPSTKKCDLRSRYKST 60

Query: 61  HCRQSFAATMNLRLEMKRSTWDAFVHVSVKILLQLKIKC 100
           HCRQSFAATMNL+LEMKRSTWDAFVHVSVKILLQLKIKC
Sbjct: 61  HCRQSFAATMNLQLEMKRSTWDAFVHVSVKILLQLKIKC 99

[Close]
BLAST of CSPI07G18310 vs. NCBI nr
Match: gi|700189798|gb|KGN45031.1| (hypothetical protein Csa_7G410340 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 1.8e-47
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 1 

Query: 1   MIIQAEISAKQGPMMSMPIPIPFTEWLRCKASTSRATSMALQPCTPSTKKCDLRSGYKST 60
           MIIQAEISAKQGPMMSMPIPIPFTEWLRCKASTSRATSMALQPCTPSTKKCDLRS YKST
Sbjct: 1   MIIQAEISAKQGPMMSMPIPIPFTEWLRCKASTSRATSMALQPCTPSTKKCDLRSRYKST 60

Query: 61  HCRQSFAATMNLRLEMKRSTWDAFVHVSVKILLQLKIKC 100
           HCRQSFAATMNL+LEMKRSTWDAFVHVSVKILLQLKIKC
Sbjct: 61  HCRQSFAATMNLQLEMKRSTWDAFVHVSVKILLQLKIKC 99

The following BLAST results are available for this feature:
BLAST of CSPI07G18310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G18310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB94_CUCSA1.2e-4797.98Uncharacterized protein OS=Cucumis sativus GN=Csa_7G410340 PE=4 SV=1[more]
BLAST of CSPI07G18310 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G18310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189798|gb|KGN45031.1|1.8e-4797.98hypothetical protein Csa_7G410340 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G18310.1CSPI07G18310.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G18310CsaV3_7G030130Cucumber (Chinese Long) v3cpicucB414
CSPI07G18310Cucsa.204900Cucumber (Gy14) v1cgycpiB325
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G18310Wax gourdcpiwgoB658
CSPI07G18310Wax gourdcpiwgoB716
CSPI07G18310Cucurbita maxima (Rimu)cmacpiB934
CSPI07G18310Cucurbita maxima (Rimu)cmacpiB276
CSPI07G18310Cucurbita maxima (Rimu)cmacpiB392
CSPI07G18310Cucurbita maxima (Rimu)cmacpiB502
CSPI07G18310Cucurbita moschata (Rifu)cmocpiB266
CSPI07G18310Cucurbita moschata (Rifu)cmocpiB381
CSPI07G18310Cucurbita moschata (Rifu)cmocpiB492
CSPI07G18310Cucurbita moschata (Rifu)cmocpiB913
CSPI07G18310Cucumber (Chinese Long) v2cpicuB354
CSPI07G18310Melon (DHL92) v3.5.1cpimeB540
CSPI07G18310Watermelon (Charleston Gray)cpiwcgB555
CSPI07G18310Watermelon (Charleston Gray)cpiwcgB560
CSPI07G18310Watermelon (97103) v1cpiwmB587
CSPI07G18310Watermelon (97103) v1cpiwmB593
CSPI07G18310Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G18310Cucurbita pepo (Zucchini)cpecpiB344
CSPI07G18310Cucurbita pepo (Zucchini)cpecpiB637
CSPI07G18310Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G18310Bottle gourd (USVL1VR-Ls)cpilsiB530
CSPI07G18310Melon (DHL92) v3.6.1cpimedB525
CSPI07G18310Cucumber (Gy14) v2cgybcpiB331
CSPI07G18310Silver-seed gourdcarcpiB0124
CSPI07G18310Silver-seed gourdcarcpiB0489
CSPI07G18310Silver-seed gourdcarcpiB0801
CSPI07G18310Silver-seed gourdcarcpiB0855
CSPI07G18310Watermelon (97103) v2cpiwmbB541
CSPI07G18310Watermelon (97103) v2cpiwmbB598