CSPI07G18210 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G18210
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionChorismate synthase
LocationChr7 : 16300229 .. 16303328 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCCACCAAACAGTGTAGCTTTTTAGTTGTTCATGTGGAAGTGAAAATGAAGCCAGTGGCTCTTCTTCTTCATCCACCAACCATCTCTCCAGCTCCTCTTCGCTTCACCTCCTCCAAATCCCACCTTCGAAATCGTCCCTTTATCCTCTCCTGTTCCGCACTTCAATCTGGATCGGTAAGATTTCAATCTGCCCCTCTCCATTTCGGAACTCGTTCGACATGTAAATCAGCTTAATTCTGCTTCATCGTTGTCTTCATTGTCGTTGAATCCATAGATAAAGGATGGGGCATCTTCGAAGGCTGAGTACAAGCCTGGAATTCTCGACCACTTCTTTCTCAACGTCTTCCGGAGCAAAATGGTTCAGGTTGTTTTATTTCGAAAGTTCGAATTAGGTTTCGAAGCAAAATGCCATGGTTCAGGTTGTTTATATCTTTAATGAGTGATATCATGGCAGGAGGTGGGCTGGGATTCTGAAAAACCTGGATATGATGGATTAATTGAAGTCGCTAGCAGGCTCACAATGACGGGCAAAACCAATTCTGAGACCATAGAAGCGTCGGTATTTCTTTTTCGAGATATATGCGTAGAGATAGAGCATCTAATTCTTTTATAACTCTTTGAACATCCGAGAGTGATTGAAAATTGTATTAGAGACTAGCCAGCTTCGTAGATTTCATTACGAAATTATGGTTATTGCTGCAGGTTCGGATTTTAATAGCTTTGTTTCCTCCTCTTTTGTTGAAACTTTATCGAATTTTGGTATCGCCTATAGCTGGTGGGAAAGTGGCTGCCATTATGGTCGGTAAGTTAAGCCTTCAGCCTTTATCTGTATCTTCAAATCAGGTTAATTATAAAAAATTAACCAGTGGATACATAAAAATTGACCCGGGCTTCTTGTAACTTAGAAAAAAATAAAAATCTGAAAAAAAAACTACATAAGTAAAAATTAACTCTCGTTGGAAGGAGGCTGACAAGCATAGTGTCTACAAATATTAAACATTGGTTGGTTTATCCATATTATATAAAGACAATCAAGTTGAGGAGCCCCCTGGGCCTATACTAAATCTGCCGGTGCCTCGAACTATGTTTGAAACTGAGACATGGAATAGTGTAGTGACAACTTTAAACGGAGATTTAAATCACCATACAGTTCTAGGTCACCACCATAACATTTCAATCCTTGATGACCGTCTAAAATTTAATTGACTTTTACTCTAAGTGTAGTTTTGAAATGTTGATGGGAGTGTAAGAGTACTATCGCAATTTTAGGATGTATAAGAATATTTTCGAAATTGATGAAAAAGTTTTAGGAGTATTCCTTATGATTGAGCCCTTTAAATTATAATTTGGATCGAATTGTGTGTGATTATATAACAAATTCCATCAAAACTTAGATAAAACGTCGAAGAGTAGTACTATATTTGGGTGTTCAATTGGGAAGTAGATCCCTTGTTGCACTATAAAAAGTTTGGATTTGATTCCTTTATAGTTGGACATCAGTTACTTTCGTTTGTTTGACTTATATCTGTCTGGTGTAAAATTTTGAATATTAGTTGAACTGCTCTGCTTCCTTTTTTCTTCTTCTATGTTAAAGCGAGGGTGACGGCGTTGACTTGTCAATGGCTTATGGGAACTTGCACAGTAAATTCAATTGAATTACCTGATGGATCGTCTTGCCAAAGTGGGGTATAAAATAAAATATTGATTTCTATATTCATGAATTTCAACCGAATAGTCAAAGCTTGTTTTTCACTTTGGTGCTCTTTTATGCAGGTCTTCGTTGAAAAGTGTAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATAAACACCTGCAAGCTTCCGACTCAGGTTTGTTCTTAAAAATCTATATATCTTATCTCTTTCTTTACATTACTGGTTATTTGGGAACACCTTGTTCATTCGAGTGTCTTCATTCTTCATACATTATTCATTTGTCTCGACTTGAACCAATCTCAACAATCTTGATTCTGATGTAGAGTTTCTTCAAGGATCAGATGGGAATCCCTCTATTAATGGAGCCAAACTTCACTGATTATAGTTGTCAGGTAATTATTCTATTGCTTAGCTCAACATTTCTGTTGTACTAATGGATAACAATGTGGGTTGAAGTAGAACGTTTCCTGTTACATGATATCGTATCAGATTAATATGATGCATCTCTGTTTAAGCTTTTAACCATACAATGTTGTTGACAGTCTGACATTTATAAGCTCTAATTTTATGAAGATTACATCAGTGTAATTTCCTATGAAATGGAATAAATTAAATCCATTAGTTGGTGACTTCTTTGGAAACTAGTGTATGCAACGTGTTGTCGCAGTATTTGATTTTGATCATATGGTGGCTGAATTTAACAGATTTGGGAGGGAAACATACGTTCCAGCTATAAACCACCTGTTTAGTGATACCCATCAGCACCTTACATGAATCTATAGATATTTCATTTCATTTTGCCTAAATTTATTTGAAAAATTCTTCTATTCTTTCCAAAATTATAGAATTACCATTGATCTTTCATAAACCTCCCAAAAGGGAAGAGTAGAGAATATACATAACTACCTTTTTGGTTTAACCTTTCCCTTTTCTTCCTCGTGTCGCAACTGAATTGACAGTTTAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATTCTCAAAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGGGAAGATAAATGCAGCACAGTGTCCAAAAGCATAGACCAACCGACCTTCAACTTGCTTGGGATCCTACTGAATTAGCTTAGCTACTTCGCTTCTGCTACAGCTGAATTCTCAAGGAAGCCTCTTGATTGCACCAACATATGTTTATTCTTGTTGCATTGTTGTGATTCATCCAAAGTTTATAGAGGAATAGTTACCCACAACTTGTATATATGATTCATTTCCCTCAATACTCTTCCACTTTGGAATAATAGCTAGAAAATTGTGCAAATCCTACTCCAAAAGAAAGAGTATATGTTATTACCCTCGAGTTATGCTCATGTTCACCCTAACAAAATTAGTTGGTTAAGTGCACAAC

mRNA sequence

ATGAAGCCAGTGGCTCTTCTTCTTCATCCACCAACCATCTCTCCAGCTCCTCTTCGCTTCACCTCCTCCAAATCCCACCTTCGAAATCGTCCCTTTATCCTCTCCTGTTCCGCACTTCAATCTGGATCGATAAAGGATGGGGCATCTTCGAAGGCTGAGTACAAGCCTGGAATTCTCGACCACTTCTTTCTCAACGTCTTCCGGAGCAAAATGGTTCAGGAGGTGGGCTGGGATTCTGAAAAACCTGGATATGATGGATTAATTGAAGTCGCTAGCAGGCTCACAATGACGGGCAAAACCAATTCTGAGACCATAGAAGCGTCGGTTCGGATTTTAATAGCTTTGTTTCCTCCTCTTTTGTTGAAACTTTATCGAATTTTGGTATCGCCTATAGCTGGTGGGAAAGTGGCTGCCATTATGGTCGCGAGGGTGACGGCGTTGACTTGTCAATGGCTTATGGGAACTTGCACAGTAAATTCAATTGAATTACCTGATGGATCGTCTTGCCAAAGTGGGGTCTTCGTTGAAAAGTGTAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATAAACACCTGCAAGCTTCCGACTCAGAGTTTCTTCAAGGATCAGATGGGAATCCCTCTATTAATGGAGCCAAACTTCACTGATTATAGTTGTCAGTTTAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATTCTCAAAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGGGAAGATAAATGCAGCACAGTGTCCAAAAGCATAG

Coding sequence (CDS)

ATGAAGCCAGTGGCTCTTCTTCTTCATCCACCAACCATCTCTCCAGCTCCTCTTCGCTTCACCTCCTCCAAATCCCACCTTCGAAATCGTCCCTTTATCCTCTCCTGTTCCGCACTTCAATCTGGATCGATAAAGGATGGGGCATCTTCGAAGGCTGAGTACAAGCCTGGAATTCTCGACCACTTCTTTCTCAACGTCTTCCGGAGCAAAATGGTTCAGGAGGTGGGCTGGGATTCTGAAAAACCTGGATATGATGGATTAATTGAAGTCGCTAGCAGGCTCACAATGACGGGCAAAACCAATTCTGAGACCATAGAAGCGTCGGTTCGGATTTTAATAGCTTTGTTTCCTCCTCTTTTGTTGAAACTTTATCGAATTTTGGTATCGCCTATAGCTGGTGGGAAAGTGGCTGCCATTATGGTCGCGAGGGTGACGGCGTTGACTTGTCAATGGCTTATGGGAACTTGCACAGTAAATTCAATTGAATTACCTGATGGATCGTCTTGCCAAAGTGGGGTCTTCGTTGAAAAGTGTAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATAAACACCTGCAAGCTTCCGACTCAGAGTTTCTTCAAGGATCAGATGGGAATCCCTCTATTAATGGAGCCAAACTTCACTGATTATAGTTGTCAGTTTAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATTCTCAAAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGGGAAGATAAATGCAGCACAGTGTCCAAAAGCATAG
Homology
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BLAST of CSPI07G18210 vs. Swiss-Prot
Match: D27_ARATH (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana GN=D27 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 66/195 (33.85%), Postives = 110/195 (56.41%), Query Frame = 1 

Query: 58  ILDHFFLNV---FRSKMVQE---VGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRI 117
           I D FF  +   + SK +Q+   +   S+   YD L++ A+R++    T  +  E  +  
Sbjct: 65  IEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQH-EFVLSS 124

Query: 118 LIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQS 177
           L    P ++  L ++   P    KV+  + A  T ++  WL+G   V   E+ +G   +S
Sbjct: 125 LDRALPTVISSLIKMAFPP---SKVSRELFALFTTISFAWLVGPSEVRETEV-NGRKEKS 184

Query: 178 GVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPL 237
            V++EKC++LE+S C+G+C + CK+P+Q F K+ +G+P+ MEP+F D SC+  FG  PP 
Sbjct: 185 VVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPE 244

Query: 238 PEEDSILKEPCLEIC 247
            E+D  +K+PC E C
Sbjct: 245 IEDDPAMKQPCFEFC 254

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BLAST of CSPI07G18210 vs. TrEMBL
Match: A0A0A0K9J2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407750 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 3.0e-149
Identity = 265/267 (99.25%), Postives = 266/267 (99.63%), Query Frame = 1 

Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD
Sbjct: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60

Query: 61  HFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
            FFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSGKINAAQCPKA 268
           PCLEICPNATRRREVSGKI+AAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKISAAQCPKA 267

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BLAST of CSPI07G18210 vs. TrEMBL
Match: B9RNC7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1346590 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 7.5e-100
Identity = 185/268 (69.03%), Postives = 220/268 (82.09%), Query Frame = 1 

Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIK-DGASSKAEYKPGIL 60
           MKP+ALL  P +IS +P         L NR F +SCS+LQS   K +   +++EYKPG  
Sbjct: 20  MKPLALL-RPLSISVSPPS-RLKLPRLFNRSFRISCSSLQSEPEKTEDVGTRSEYKPGFF 79

Query: 61  DHFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPL 120
           D FFL +FR+KMV EVGWDSEK GYDGLIEVA+RL +TG +N++T +A+VRIL +LFPPL
Sbjct: 80  DDFFLTLFRNKMVAEVGWDSEKAGYDGLIEVANRLMLTGTSNADTRDAAVRILRSLFPPL 139

Query: 121 LLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK 180
           LL LY++L+SP+  GKVAAIMVARVTA+TCQWLMGTCTVNSI+LPDGSSC+SGVFVE+CK
Sbjct: 140 LLDLYKLLISPLGEGKVAAIMVARVTAITCQWLMGTCTVNSIDLPDGSSCESGVFVERCK 199

Query: 181 YLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILK 240
           YLEESKC+GIC+NTCKLPTQ+FFKD MG+PLLMEPNFTDYSCQFKFGVLPP PE+DS LK
Sbjct: 200 YLEESKCVGICVNTCKLPTQAFFKDYMGVPLLMEPNFTDYSCQFKFGVLPPQPEDDSTLK 259

Query: 241 EPCLEICPNATRRREVSGKINAAQCPKA 268
           EPCLE CP A+RR+     +N A CPKA
Sbjct: 260 EPCLEACPIASRRQV---SLNIAHCPKA 282

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BLAST of CSPI07G18210 vs. TrEMBL
Match: D7U2J7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01610 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.3e-99
Identity = 180/265 (67.92%), Postives = 216/265 (81.51%), Query Frame = 1 

Query: 6   LLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILDHFFLN 65
           + L P T SP+P     SK  ++N  F +S S+ QS +++ G     EYKPG+ D  FLN
Sbjct: 5   VFLRPLTFSPSP---PQSKLSVKNPSFRISFSSAQSNAVEAG-----EYKPGVFDDLFLN 64

Query: 66  VFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLKLYR 125
           +FRS+MV+EVGWDSEKPGYDGLI+VA++L M  K+NS+  EA+VRILI+LFPP LL LYR
Sbjct: 65  LFRSRMVKEVGWDSEKPGYDGLIDVANQLMMKSKSNSKVKEAAVRILISLFPPFLLDLYR 124

Query: 126 ILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESK 185
           +LV+PI GGKVAA+MVARVTAL+CQWLMG CTVNS+ LPDGSSC SGVFVE+CKYLEESK
Sbjct: 125 MLVAPIGGGKVAAMMVARVTALSCQWLMGPCTVNSVNLPDGSSCSSGVFVERCKYLEESK 184

Query: 186 CIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEI 245
           C+GICINTCKLPTQ+FFKD MG+PL MEP+FT+YSCQF FGVLPP PEEDS LKEPCLEI
Sbjct: 185 CVGICINTCKLPTQTFFKDYMGVPLAMEPDFTNYSCQFSFGVLPPRPEEDSTLKEPCLEI 244

Query: 246 CPNATRRREVSGKIN---AAQCPKA 268
           CPNATRR+E++  ++     QCPKA
Sbjct: 245 CPNATRRKEINRNMDNKELVQCPKA 261

[Close]
BLAST of CSPI07G18210 vs. TrEMBL
Match: A0A0D2SIH9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G121600 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 4.1e-98
Identity = 175/270 (64.81%), Postives = 211/270 (78.15%), Query Frame = 1 

Query: 1   MKPVALLLHPPT---ISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPG 60
           M P+AL L  P    +S +P+    + S      F   CS++   +I     SKAEYKPG
Sbjct: 3   MTPLALTLPAPQTVMVSSSPIYLLPTSSLQNRTSFRAFCSSVSPETIHS-EGSKAEYKPG 62

Query: 61  ILDHFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFP 120
           ILDHFFLN FR K+V+EVGWDSEKPGY GLIE+A  L M  ++NS T +A+VRIL +LFP
Sbjct: 63  ILDHFFLNSFRDKLVKEVGWDSEKPGYGGLIELAKALMMNSRSNSHTKDAAVRILKSLFP 122

Query: 121 PLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEK 180
           PLLL+LY+IL++PI GG+VAA+M+ARVT LTCQWLMGTC VNS++LPDG+SC SGVFVE+
Sbjct: 123 PLLLELYKILIAPIDGGRVAAMMIARVTVLTCQWLMGTCKVNSVDLPDGTSCNSGVFVER 182

Query: 181 CKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSI 240
           CKYLEESKC+GICINTCKLPTQSFFKD MG+PLLMEPNF DYSCQFKFGV PPLPE D  
Sbjct: 183 CKYLEESKCVGICINTCKLPTQSFFKDYMGVPLLMEPNFCDYSCQFKFGVSPPLPENDDT 242

Query: 241 LKEPCLEICPNATRRREVSGKINAAQCPKA 268
           LKEPCL++CP A +RRE+   ++  +CPKA
Sbjct: 243 LKEPCLDVCPIANKRREIRRNVDVMKCPKA 271

[Close]
BLAST of CSPI07G18210 vs. TrEMBL
Match: A0A067JZS7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14044 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 5.4e-98
Identity = 177/270 (65.56%), Postives = 220/270 (81.48%), Query Frame = 1 

Query: 1   MKPVALL--LHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIK-DGASSKAEYKPG 60
           MKPV LL  L   + SP+ L F S   H     F +SCS+ +S  +K     +++EY+PG
Sbjct: 1   MKPVVLLRPLSISSSSPSCLHFPSKTVH-HCPIFRVSCSSPRSELVKAKDTGTRSEYEPG 60

Query: 61  ILDHFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFP 120
           +LD  FL +FR+KMV+EVGWDS+KPGYDGLI+VA+RL +TG+TN+ET EA+VRIL +LFP
Sbjct: 61  LLDDLFLTLFRNKMVKEVGWDSDKPGYDGLIQVANRLMLTGRTNAETREAAVRILRSLFP 120

Query: 121 PLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEK 180
           PL+L LY++L+SP+ GGK AA+MVARVT LTCQWLMG CTVNSI+LPDG+S +SGVFVE+
Sbjct: 121 PLILDLYKLLISPLGGGKAAALMVARVTVLTCQWLMGKCTVNSIDLPDGTSFESGVFVER 180

Query: 181 CKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSI 240
           CKYLEESKC+GIC+NTCKLPTQ+FF D MG+PLLMEPNFTDYSCQFKFGV PP PE+DS 
Sbjct: 181 CKYLEESKCVGICVNTCKLPTQTFFNDYMGVPLLMEPNFTDYSCQFKFGVPPPKPEDDST 240

Query: 241 LKEPCLEICPNATRRREVSGKINAAQCPKA 268
           LKEPCLE CP A+RR++V+  ++  QCPKA
Sbjct: 241 LKEPCLEACPIASRRKQVAQNVDIGQCPKA 269

[Close]
BLAST of CSPI07G18210 vs. TAIR10
Match: AT4G01995.1 (AT4G01995.1 unknown protein)

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-81
Identity = 156/265 (58.87%), Postives = 192/265 (72.45%), Query Frame = 1 

Query: 4   VALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIK-DGASSKAEYKPGILDHF 63
           + +LL PPT       F S+K  L  R   L C    S  +K D  + K EYKPG LD F
Sbjct: 5   IQVLLPPPTTIVFSNSF-STKLILTRR---LRCRISNSSEVKSDEGAPKLEYKPGPLDDF 64

Query: 64  FLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLK 123
           F+  FR+K+V+EVG DSEKPGY GLIE+   L + G+T SET +A+VRIL +LFPPL+L+
Sbjct: 65  FMQSFRNKLVEEVGSDSEKPGYVGLIELVKLLLLKGRTRSETSDAAVRILKSLFPPLILE 124

Query: 124 LYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLE 183
           LY++L++PIA GK+AA+MVARVT LTCQWLMG   VN I+LP+G S  SGVFVEKC+YLE
Sbjct: 125 LYKLLIAPIAQGKLAALMVARVTVLTCQWLMGPSKVNIIDLPNGESWDSGVFVEKCQYLE 184

Query: 184 ESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPC 243
           ESKC+G+CINTCKLPTQ+FFKD MG+PL+MEPNF DYSCQFKFGV P  PE+D  + EPC
Sbjct: 185 ESKCVGVCINTCKLPTQTFFKDYMGVPLVMEPNFKDYSCQFKFGVAP--PEDDGNVNEPC 244

Query: 244 LEICPNATRRREVSGKINAAQCPKA 268
            E C  A RR     K+ + +CP A
Sbjct: 245 FETCSIAGRR-----KLKSGECPLA 258

[Close]
BLAST of CSPI07G18210 vs. TAIR10
Match: AT1G64680.1 (AT1G64680.1 unknown protein)

HSP 1 Score: 136.0 bits (341), Expect = 3.5e-32
Identity = 77/220 (35.00%), Postives = 125/220 (56.82%), Query Frame = 1 

Query: 51  KAEYKPGILDHFFLNVFRSKMVQ---EVGWDSEKPG-----YDGLIEVASRLTMTGKTNS 110
           K  Y+ G+++  F+ +F  KM +   +   D+++ G     Y+  +EV+ R+ M G++  
Sbjct: 36  KTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKEKGFWEYDYESFVEVSKRV-MQGRSRV 95

Query: 111 ETIEASVRILIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIE 170
           +  EA   +L+++ PP   + +R L  P    K AA   A +T     WL+G   V  +E
Sbjct: 96  QQQEAVREVLLSMLPPGAPEQFRKLFPPT---KWAAEFNAALTVPFFHWLVGPSQVIEVE 155

Query: 171 LPDGSSCQSGVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQ 230
           + +G   +SGV ++KC+YLE S C+G+C+N CK+PTQ FF ++ G+PL M PN+ D SC+
Sbjct: 156 V-NGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNYEDMSCE 215

Query: 231 FKFGVLPPLPEEDSILKEPCL-EICPNATRRREVSGKINA 262
             +G  PP  EED   K+PCL +IC  +     +  K+ A
Sbjct: 216 MIYGQAPPAFEEDVATKQPCLADICSMSNPSSPICPKLEA 250

[Close]
BLAST of CSPI07G18210 vs. TAIR10
Match: AT1G03055.1 (AT1G03055.1 unknown protein)

HSP 1 Score: 121.3 bits (303), Expect = 8.9e-28
Identity = 66/195 (33.85%), Postives = 110/195 (56.41%), Query Frame = 1 

Query: 58  ILDHFFLNV---FRSKMVQE---VGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRI 117
           I D FF  +   + SK +Q+   +   S+   YD L++ A+R++    T  +  E  +  
Sbjct: 65  IEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQH-EFVLSS 124

Query: 118 LIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQS 177
           L    P ++  L ++   P    KV+  + A  T ++  WL+G   V   E+ +G   +S
Sbjct: 125 LDRALPTVISSLIKMAFPP---SKVSRELFALFTTISFAWLVGPSEVRETEV-NGRKEKS 184

Query: 178 GVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPL 237
            V++EKC++LE+S C+G+C + CK+P+Q F K+ +G+P+ MEP+F D SC+  FG  PP 
Sbjct: 185 VVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPE 244

Query: 238 PEEDSILKEPCLEIC 247
            E+D  +K+PC E C
Sbjct: 245 IEDDPAMKQPCFEFC 254

[Close]
BLAST of CSPI07G18210 vs. NCBI nr
Match: gi|449436415|ref|XP_004135988.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis sativus])

HSP 1 Score: 535.8 bits (1379), Expect = 4.3e-149
Identity = 265/267 (99.25%), Postives = 266/267 (99.63%), Query Frame = 1 

Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD
Sbjct: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60

Query: 61  HFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
            FFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSGKINAAQCPKA 268
           PCLEICPNATRRREVSGKI+AAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKISAAQCPKA 267

[Close]
BLAST of CSPI07G18210 vs. NCBI nr
Match: gi|659101188|ref|XP_008451473.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis melo])

HSP 1 Score: 518.1 bits (1333), Expect = 9.3e-144
Identity = 255/267 (95.51%), Postives = 260/267 (97.38%), Query Frame = 1 

Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKP+ALLLHPPTIS APLRF SSKSHLRNRPFILSCSALQSGSIKDG SSK+EYKPGILD
Sbjct: 1   MKPLALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 61  HFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
            FFLNVFRSKMVQEVGWDSEKPGY GLIEVASRLTMTG+TNSETIEASVRIL ALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSGKINAAQCPKA 268
           PCLEICPNATRRREVSGK++AAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]
BLAST of CSPI07G18210 vs. NCBI nr
Match: gi|255548419|ref|XP_002515266.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic [Ricinus communis])

HSP 1 Score: 371.7 bits (953), Expect = 1.1e-99
Identity = 185/268 (69.03%), Postives = 220/268 (82.09%), Query Frame = 1 

Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIK-DGASSKAEYKPGIL 60
           MKP+ALL  P +IS +P         L NR F +SCS+LQS   K +   +++EYKPG  
Sbjct: 20  MKPLALL-RPLSISVSPPS-RLKLPRLFNRSFRISCSSLQSEPEKTEDVGTRSEYKPGFF 79

Query: 61  DHFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPL 120
           D FFL +FR+KMV EVGWDSEK GYDGLIEVA+RL +TG +N++T +A+VRIL +LFPPL
Sbjct: 80  DDFFLTLFRNKMVAEVGWDSEKAGYDGLIEVANRLMLTGTSNADTRDAAVRILRSLFPPL 139

Query: 121 LLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK 180
           LL LY++L+SP+  GKVAAIMVARVTA+TCQWLMGTCTVNSI+LPDGSSC+SGVFVE+CK
Sbjct: 140 LLDLYKLLISPLGEGKVAAIMVARVTAITCQWLMGTCTVNSIDLPDGSSCESGVFVERCK 199

Query: 181 YLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILK 240
           YLEESKC+GIC+NTCKLPTQ+FFKD MG+PLLMEPNFTDYSCQFKFGVLPP PE+DS LK
Sbjct: 200 YLEESKCVGICVNTCKLPTQAFFKDYMGVPLLMEPNFTDYSCQFKFGVLPPQPEDDSTLK 259

Query: 241 EPCLEICPNATRRREVSGKINAAQCPKA 268
           EPCLE CP A+RR+     +N A CPKA
Sbjct: 260 EPCLEACPIASRRQV---SLNIAHCPKA 282

[Close]
BLAST of CSPI07G18210 vs. NCBI nr
Match: gi|225437593|ref|XP_002271003.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic [Vitis vinifera])

HSP 1 Score: 370.9 bits (951), Expect = 1.8e-99
Identity = 180/265 (67.92%), Postives = 216/265 (81.51%), Query Frame = 1 

Query: 6   LLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILDHFFLN 65
           + L P T SP+P     SK  ++N  F +S S+ QS +++ G     EYKPG+ D  FLN
Sbjct: 5   VFLRPLTFSPSP---PQSKLSVKNPSFRISFSSAQSNAVEAG-----EYKPGVFDDLFLN 64

Query: 66  VFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLKLYR 125
           +FRS+MV+EVGWDSEKPGYDGLI+VA++L M  K+NS+  EA+VRILI+LFPP LL LYR
Sbjct: 65  LFRSRMVKEVGWDSEKPGYDGLIDVANQLMMKSKSNSKVKEAAVRILISLFPPFLLDLYR 124

Query: 126 ILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESK 185
           +LV+PI GGKVAA+MVARVTAL+CQWLMG CTVNS+ LPDGSSC SGVFVE+CKYLEESK
Sbjct: 125 MLVAPIGGGKVAAMMVARVTALSCQWLMGPCTVNSVNLPDGSSCSSGVFVERCKYLEESK 184

Query: 186 CIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEI 245
           C+GICINTCKLPTQ+FFKD MG+PL MEP+FT+YSCQF FGVLPP PEEDS LKEPCLEI
Sbjct: 185 CVGICINTCKLPTQTFFKDYMGVPLAMEPDFTNYSCQFSFGVLPPRPEEDSTLKEPCLEI 244

Query: 246 CPNATRRREVSGKIN---AAQCPKA 268
           CPNATRR+E++  ++     QCPKA
Sbjct: 245 CPNATRRKEINRNMDNKELVQCPKA 261

[Close]
BLAST of CSPI07G18210 vs. NCBI nr
Match: gi|1011999706|ref|XP_015971593.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic [Arachis duranensis])

HSP 1 Score: 370.5 bits (950), Expect = 2.4e-99
Identity = 175/259 (67.57%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 16  APLRFTSS-----KSHLRNRPFILSCSALQSGSIKDGASS---KAEYKPGILDHFFLNVF 75
           AP  FT+S     +  LRN PF +SCS+  S ++++ A +   K+EYKPG+ D FFLN+F
Sbjct: 11  APTGFTTSFHEPKQKPLRNNPFCVSCSS-SSKTVQEQAKTAVLKSEYKPGVFDDFFLNLF 70

Query: 76  RSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLKLYRIL 135
           R+K+VQEVGWDS++PGYDGLIEV +RL M GKTNS+TIEA+VR+L ALFPP LL+LY+I 
Sbjct: 71  RNKLVQEVGWDSQRPGYDGLIEVVNRLMMKGKTNSDTIEAAVRVLRALFPPFLLELYKIF 130

Query: 136 VSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCI 195
           ++P+  GK+AA+MVARVTALTCQWLMG C VNS+ELPDG+ C SGVFVE+CKYLEESKC+
Sbjct: 131 IAPLGRGKIAAMMVARVTALTCQWLMGPCKVNSVELPDGTLCSSGVFVERCKYLEESKCV 190

Query: 196 GICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEICP 255
           GICINTCK PTQ+FFKD MG+PLLMEPNF DYSCQFKFGVL P  E+DS+LKEPCLEICP
Sbjct: 191 GICINTCKFPTQTFFKDHMGVPLLMEPNFADYSCQFKFGVLAPPHEDDSVLKEPCLEICP 250

Query: 256 NATRRREVSGKINAAQCPK 267
           NA +RR V+  I+   CPK
Sbjct: 251 NAAKRRTVARNIDVTTCPK 268

The following BLAST results are available for this feature:
BLAST of CSPI07G18210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
D27_ARATH1.6e-2633.85Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana GN=D27 PE=1 S... [more]
BLAST of CSPI07G18210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9J2_CUCSA3.0e-14999.25Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407750 PE=4 SV=1[more]
B9RNC7_RICCO7.5e-10069.03Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1346590 PE=4 SV=1[more]
D7U2J7_VITVI1.3e-9967.92Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01610 PE=4 SV=... [more]
A0A0D2SIH9_GOSRA4.1e-9864.81Uncharacterized protein OS=Gossypium raimondii GN=B456_007G121600 PE=4 SV=1[more]
A0A067JZS7_JATCU5.4e-9865.56Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14044 PE=4 SV=1[more]
BLAST of CSPI07G18210 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01995.11.1e-8158.87 unknown protein[more]
AT1G64680.13.5e-3235.00 unknown protein[more]
AT1G03055.18.9e-2833.85 unknown protein[more]
BLAST of CSPI07G18210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436415|ref|XP_004135988.1|4.3e-14999.25PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis sativus][more]
gi|659101188|ref|XP_008451473.1|9.3e-14495.51PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis melo][more]
gi|255548419|ref|XP_002515266.1|1.1e-9969.03PREDICTED: beta-carotene isomerase D27, chloroplastic [Ricinus communis][more]
gi|225437593|ref|XP_002271003.1|1.8e-9967.92PREDICTED: beta-carotene isomerase D27, chloroplastic [Vitis vinifera][more]
gi|1011999706|ref|XP_015971593.1|2.4e-9967.57PREDICTED: beta-carotene isomerase D27, chloroplastic [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025114DUF4033
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000413 protein peptidyl-prolyl isomerization
cellular_component GO:0005575 cellular_component
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G18210.1CSPI07G18210.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025114Domain of unknown function DUF4033PFAMPF13225DUF4033coord: 151..232
score: 5.4
NoneNo IPR availablePANTHERPTHR33591FAMILY NOT NAMEDcoord: 5..267
score: 2.5E
NoneNo IPR availablePANTHERPTHR33591:SF2SUBFAMILY NOT NAMEDcoord: 5..267
score: 2.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G18210Cla015148Watermelon (97103) v1cpiwmB587
CSPI07G18210Csa7G407750Cucumber (Chinese Long) v2cpicuB354
CSPI07G18210MELO3C015917Melon (DHL92) v3.5.1cpimeB540
CSPI07G18210ClCG09G005020Watermelon (Charleston Gray)cpiwcgB555
CSPI07G18210Lsi02G024850Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G18210MELO3C015917.2Melon (DHL92) v3.6.1cpimedB525
CSPI07G18210CsaV3_7G030040Cucumber (Chinese Long) v3cpicucB414
CSPI07G18210Cla97C09G167450Watermelon (97103) v2cpiwmbB598
CSPI07G18210Bhi09G000667Wax gourdcpiwgoB716
CSPI07G18210CsGy7G016670Cucumber (Gy14) v2cgybcpiB331
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G18210Silver-seed gourdcarcpiB0124
CSPI07G18210Silver-seed gourdcarcpiB0489
CSPI07G18210Silver-seed gourdcarcpiB0801
CSPI07G18210Silver-seed gourdcarcpiB0855
CSPI07G18210Watermelon (97103) v2cpiwmbB541
CSPI07G18210Wax gourdcpiwgoB658
CSPI07G18210Cucurbita maxima (Rimu)cmacpiB934
CSPI07G18210Cucumber (Gy14) v1cgycpiB325
CSPI07G18210Cucurbita maxima (Rimu)cmacpiB276
CSPI07G18210Cucurbita maxima (Rimu)cmacpiB392
CSPI07G18210Cucurbita maxima (Rimu)cmacpiB502
CSPI07G18210Cucurbita moschata (Rifu)cmocpiB266
CSPI07G18210Cucurbita moschata (Rifu)cmocpiB381
CSPI07G18210Cucurbita moschata (Rifu)cmocpiB492
CSPI07G18210Cucurbita moschata (Rifu)cmocpiB913
CSPI07G18210Watermelon (Charleston Gray)cpiwcgB560
CSPI07G18210Watermelon (97103) v1cpiwmB593
CSPI07G18210Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G18210Cucurbita pepo (Zucchini)cpecpiB344
CSPI07G18210Cucurbita pepo (Zucchini)cpecpiB637
CSPI07G18210Bottle gourd (USVL1VR-Ls)cpilsiB530