CSPI07G17560 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G17560
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	DUF538 family protein
Location	Chr7 : 15902144 .. 15903088 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATAAAAAATAGAAAAAAGAAAAAAAATCCATTTAACAAAATTAATTGGGATCCACCTTCTTCGTCTTCCATCCAAATCAAAAAGCGAAACAGTTCAGAACTTGAAGAGGAAGAAACAAGAAGAAGAAGAGGAAGAAGAAGAAGATCGAAGAAGATGAGTTTCTCTAAACTTATGGCTTCTCTTCTTCTCCTTGCTTCAATCTCATTATCAACCTCTCTCGTCTCCGATCCAGAAGCTCTTACCGCCTACGATATTCTCCAACAGTACGGTTTCCCCGTCGGCATTCTTCCTATAGGTGCTACCGGCTATCAATTGAACAGAGCCACCGGTGAATTCAGCCTCTACTTGAGTCAGAAATGCAAATTCAAAATCGATTCCTATGAATTGGAGTATAAATCTACCTTACAAGGCGTGATTTCCAAAGGCAGAATCAGGAAACTCAAAGGTGTTTCTGTTAAGATCTTCCTCTTGTGGCTCAGCATCGTCGAAGTCGTTAACGATGGTGACGACCTTCAATTTTCTGTTGGAATTGCTTCTGCAAATTTCCCGCTGGACAGTTTCTATGAGTCGCCGCGGTGTGGATGTGGATTTGATTGCGATAATGGCGCTGGGAGCTTGGTTTCGGCTTCTTGAAATTAGGTGAAACTTGTGTCAATTAGGGAATGTTAGGTTTTCAATCGCGTTGATTACTTTAAACTAGTAATGTCCTCTTGCTTTGAACTTACTTTATATGCGATGTCCGAGATCGGATTAGCTCAATCATTACATTCTGTTTATGTTCAAATAGAATTGTATCGTTCTGTCACTTGAATCTGCTTCTGATCGTCGATTATATATTTATGGTATGAACTATTCTGTCTATTAGGTCATCGATGGCATCAATCGCCTTATCAATTTGTGTGAAACCCTAAATCCTTATCTTCCATCTACTGGCATCACTT

mRNA sequence

ATGAGTTTCTCTAAACTTATGGCTTCTCTTCTTCTCCTTGCTTCAATCTCATTATCAACCTCTCTCGTCTCCGATCCAGAAGCTCTTACCGCCTACGATATTCTCCAACAGTACGGTTTCCCCGTCGGCATTCTTCCTATAGGTGCTACCGGCTATCAATTGAACAGAGCCACCGGTGAATTCAGCCTCTACTTGAGTCAGAAATGCAAATTCAAAATCGATTCCTATGAATTGGAGTATAAATCTACCTTACAAGGCGTGATTTCCAAAGGCAGAATCAGGAAACTCAAAGGTGTTTCTGTTAAGATCTTCCTCTTGTGGCTCAGCATCGTCGAAGTCGTTAACGATGGTGACGACCTTCAATTTTCTGTTGGAATTGCTTCTGCAAATTTCCCGCTGGACAGTTTCTATGAGTCGCCGCGGTGTGGATGTGGATTTGATTGCGATAATGGCGCTGGGAGCTTGGTTTCGGCTTCTTGA

Coding sequence (CDS)

ATGAGTTTCTCTAAACTTATGGCTTCTCTTCTTCTCCTTGCTTCAATCTCATTATCAACCTCTCTCGTCTCCGATCCAGAAGCTCTTACCGCCTACGATATTCTCCAACAGTACGGTTTCCCCGTCGGCATTCTTCCTATAGGTGCTACCGGCTATCAATTGAACAGAGCCACCGGTGAATTCAGCCTCTACTTGAGTCAGAAATGCAAATTCAAAATCGATTCCTATGAATTGGAGTATAAATCTACCTTACAAGGCGTGATTTCCAAAGGCAGAATCAGGAAACTCAAAGGTGTTTCTGTTAAGATCTTCCTCTTGTGGCTCAGCATCGTCGAAGTCGTTAACGATGGTGACGACCTTCAATTTTCTGTTGGAATTGCTTCTGCAAATTTCCCGCTGGACAGTTTCTATGAGTCGCCGCGGTGTGGATGTGGATTTGATTGCGATAATGGCGCTGGGAGCTTGGTTTCGGCTTCTTGA

Homology

[Close]

BLAST of CSPI07G17560 vs. Swiss-Prot
Match: Y5161_ARATH (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 24/95 (25.26%), Postives = 55/95 (57.89%), Query Frame = 1


Query: 33  DILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKI-DSYELEYKSTLQGVISKG 92
           ++L++Y  P+GI P  AT Y+ +  T + ++ +   C+    DS  L++ +T+ G + KG
Sbjct: 56  ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKG 115

Query: 93  RIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGI 127
           ++  ++G+  K+ ++W+ +  +  D   + F+ G+
Sbjct: 116 KLTDVEGIKTKV-MIWVKVTSISTDASKVYFTAGM 149

[Close]

BLAST of CSPI07G17560 vs. TrEMBL
Match: A0A0A0K7U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398110 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.4e-69
Identity = 135/144 (93.75%), Postives = 138/144 (95.83%), Query Frame = 1


Query: 16  ISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS 75
           +S +  +V   EALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS
Sbjct: 6   VSNALKVVVFREALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS 65

Query: 76  YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS 135
           YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS
Sbjct: 66  YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS 125

Query: 136 FYESPRCGCGFDCDNGAGSLVSAS 160
           FYESPRCGCGFDCDNGAGSLVSAS
Sbjct: 126 FYESPRCGCGFDCDNGAGSLVSAS 149

[Close]

BLAST of CSPI07G17560 vs. TrEMBL
Match: A0A0D2QRM0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G127500 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47
Identity = 92/143 (64.34%), Postives = 114/143 (79.72%), Query Frame = 1


Query: 7   MASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLS 66
           + S++ L  +SL  SL S  + L+AY +LQQY FP GILP G +GY+LNR TGEFS +L 
Sbjct: 3   LRSVIFLILVSLPASLASANDKLSAYQVLQQYDFPAGILPKGVSGYELNRGTGEFSAHLQ 62

Query: 67  QKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGI 126
             C FKIDSYEL YKST+QGVIS GRI  LKGVSVK+   WL IV+V++DGD+++FSVGI
Sbjct: 63  GTCNFKIDSYELSYKSTIQGVISPGRITNLKGVSVKVLFFWLDIVQVIHDGDEMEFSVGI 122

Query: 127 ASANFPLDSFYESPRCGCGFDCD 150
           ASANFP+D+FYESP+CGCGFDC+
Sbjct: 123 ASANFPIDNFYESPQCGCGFDCN 145

[Close]

BLAST of CSPI07G17560 vs. TrEMBL
Match: A0A0D2R182_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G091000 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-46
Identity = 94/148 (63.51%), Postives = 117/148 (79.05%), Query Frame = 1


Query: 11  LLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCK 70
           L+L S+  S+  V+D + L+AY  LQQY FPVGILP G  GY+LNR TGEFS YLS  CK
Sbjct: 11  LILISLPASSFAVADDDNLSAYQALQQYDFPVGILPNGVVGYELNRETGEFSAYLSGACK 70

Query: 71  FKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASAN 130
           F IDSY+L Y+ST++GVIS GRI  LKGVSVKI   WL+I EV+++GD ++FSVGIASAN
Sbjct: 71  FDIDSYQLSYESTIKGVISPGRITNLKGVSVKILFFWLNIGEVIHNGDQMEFSVGIASAN 130

Query: 131 FPLDSFYESPRCGCGFDCDNGAGSLVSA 159
           FP+D+FYESP+CGCGF+C NG  +L S+
Sbjct: 131 FPIDNFYESPQCGCGFNC-NGLNALASS 157

[Close]

BLAST of CSPI07G17560 vs. TrEMBL
Match: A0A0J8C1K9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163620 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 95/148 (64.19%), Postives = 111/148 (75.00%), Query Frame = 1


Query: 11  LLLASISLSTSLVSD-PEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKC 70
           LL  S+SL  + V+   +  TAY++L+ Y FPVGILP G TGY+LN  TGEF LYL Q C
Sbjct: 14  LLFISLSLLFAFVAPYTDTPTAYELLESYDFPVGILPKGVTGYELNPDTGEFKLYLPQTC 73

Query: 71  KFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASA 130
           KF I  Y+LEYKST+ GV+SK RI KLKG+SV+IF++WLSI EV N    LQFSVGIASA
Sbjct: 74  KFSIQGYDLEYKSTISGVVSKDRITKLKGISVRIFIIWLSITEVDNKNGQLQFSVGIASA 133

Query: 131 NFPLDSFYESPRCGCGFDCDNGAGSLVS 158
           NFPLD F ESP CGCGFDC NGA  L+S
Sbjct: 134 NFPLDGFEESPTCGCGFDC-NGANHLIS 160

[Close]

BLAST of CSPI07G17560 vs. TrEMBL
Match: A0A061DQP6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_004685 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.0e-44
Identity = 90/151 (59.60%), Postives = 114/151 (75.50%), Query Frame = 1


Query: 7   MASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLS 66
           + S++LL  ISL  S  S  E L+AY +LQQY FP+GILP G  GY+LNR TGEFS YL+
Sbjct: 3   LRSVILLILISLPASFASTDEKLSAYQVLQQYDFPIGILPEGVIGYELNRDTGEFSAYLN 62

Query: 67  QKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGI 126
             C F I+SY+L YKST+QGVIS+GRI KL GVSVK+   WL+IVE+   GD+L+FSVGI
Sbjct: 63  GTCSFPIESYDLSYKSTVQGVISRGRITKLNGVSVKVLFFWLNIVELSRHGDELEFSVGI 122

Query: 127 ASANFPLDSFYESPRCGCGFDCDNGAGSLVS 158
           ASA+FP+D+F+ESP+CGCG  C+   G + S
Sbjct: 123 ASASFPIDNFFESPQCGCGLYCNQLNGFVSS 153

[Close]

BLAST of CSPI07G17560 vs. TAIR10
Match: AT1G02816.1 (AT1G02816.1 Protein of unknown function, DUF538)

HSP 1 Score: 161.8 bits (408), Expect = 3.6e-40
Identity = 72/126 (57.14%), Postives = 95/126 (75.40%), Query Frame = 1


Query: 24  SDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKID-SYELEYKS 83
           +D +  TAY +LQ Y FPVGILP G   Y L+++TG+F  Y ++ C F +  SY+L+YKS
Sbjct: 25  NDDDIPTAYTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCSFALQGSYQLDYKS 84

Query: 84  TLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDSFYESPRC 143
           T+ G IS+ +I KL GV VK+  LWL+IVEV+ +GD+L+FSVGI SANF +D FYESP+C
Sbjct: 85  TISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITSANFEIDEFYESPQC 144

Query: 144 GCGFDC 149
           GCGFDC
Sbjct: 145 GCGFDC 150

[Close]

BLAST of CSPI07G17560 vs. TAIR10
Match: AT4G02370.1 (AT4G02370.1 Protein of unknown function, DUF538)

HSP 1 Score: 156.4 bits (394), Expect = 1.5e-38
Identity = 72/144 (50.00%), Postives = 101/144 (70.14%), Query Frame = 1


Query: 6   LMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYL 65
           L+AS L L+S++ +    ++ +  TAY +LQ Y FPVGILP G   Y L+  TG+F  Y 
Sbjct: 7   LIASCLFLSSLTAAVVTAAESDTPTAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYF 66

Query: 66  SQKCKFK-IDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSV 125
           +  C F  + SY+L YKST+ G IS+ +++KL GV VK+  LWL+IVEV+ +GD+++FSV
Sbjct: 67  NDSCSFNLVGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSV 126

Query: 126 GIASANFPLDSFYESPRCGCGFDC 149
           GI SANF +  F ESP+CGCGF+C
Sbjct: 127 GITSANFAIQEFLESPQCGCGFEC 150

[Close]

BLAST of CSPI07G17560 vs. TAIR10
Match: AT4G02360.1 (AT4G02360.1 Protein of unknown function, DUF538)

HSP 1 Score: 156.4 bits (394), Expect = 1.5e-38
Identity = 71/122 (58.20%), Postives = 89/122 (72.95%), Query Frame = 1


Query: 30  TAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDSYELEYKSTLQGVIS 89
           TAYD ++ Y  P GILP G   Y+LN  TG F +Y +  C+F I SY+L+YKST+ GVIS
Sbjct: 28  TAYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTIQSYQLKYKSTISGVIS 87

Query: 90  KGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDSFYESPRCGCGFDCD 149
            G ++ LKGVSVK+   W++I EV  DG DL FSVGIASA+FP  +F ESP+CGCGFDC+
Sbjct: 88  PGHVKNLKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASASFPAANFEESPQCGCGFDCN 147

Query: 150 NG 152
           NG
Sbjct: 148 NG 149

[Close]

BLAST of CSPI07G17560 vs. TAIR10
Match: AT1G02813.1 (AT1G02813.1 Protein of unknown function, DUF538)

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-31
Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 1


Query: 9   SLLLLASISLSTSL-VSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQ 68
           S+ ++  + LSTS+ VS  +  + Y +L+ Y  P GILP G   Y LNR TG F +  + 
Sbjct: 2   SIFIIFLLLLSTSVSVSGQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNT 61

Query: 69  KCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIA 128
            C+F IDSY+++YK  + G+I++GR+ +L GVSVK+   W++I EV  DGDD++F VG A
Sbjct: 62  TCQFSIDSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGDDVEFFVGAA 121

Query: 129 SANFPLDSFYESPRCGCGFDC 149
           S  F    F +SP+CGCGF+C
Sbjct: 122 SEEFSSKYFVDSPKCGCGFNC 142

[Close]

BLAST of CSPI07G17560 vs. TAIR10
Match: AT5G19590.1 (AT5G19590.1 Protein of unknown function, DUF538)

HSP 1 Score: 88.6 bits (218), Expect = 3.8e-18
Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 1


Query: 1   MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE 60
           M  S  + S+L+L  ISL        +   A+  L  +GFP+G+LP+    Y LN+ +G+
Sbjct: 1   MKISLFLLSILILLPISLQDPTPEVKKPTRAHAELTNHGFPIGLLPLSVKDYFLNQTSGD 60

Query: 61  FSLYLSQKCKFKI--DSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGD 120
           FSL+L+  CK  +  D+Y   Y + + G IS+G+I +L+G+ V+ F    SI  + + GD
Sbjct: 61  FSLFLNGACKITLPPDNYIATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGD 120

Query: 121 DLQFSVGIASANFPLDSFYESPRC 143
           +L F V   +A +P  +F ES  C
Sbjct: 121 NLVFEVAGITAKYPSKNFDESLDC 144

[Close]

BLAST of CSPI07G17560 vs. NCBI nr
Match: gi|778728081|ref|XP_004136020.2| (PREDICTED: uncharacterized protein LOC101206914 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 3.9e-81
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE 60
           MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE
Sbjct: 42  MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE 101

Query: 61  FSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDL 120
           FSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDL
Sbjct: 102 FSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDL 161

Query: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 160
           QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS
Sbjct: 162 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 200

[Close]

BLAST of CSPI07G17560 vs. NCBI nr
Match: gi|659101339|ref|XP_008451556.1| (PREDICTED: uncharacterized protein LOC103492801 [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 4.5e-77
Identity = 149/159 (93.71%), Postives = 157/159 (98.74%), Query Frame = 1


Query: 1   MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE 60
           MSFSKL+ASLLLLASISLSTSL+SDP+ LTAYDILQQYGFPVGILPIGATGY+LNRATGE
Sbjct: 1   MSFSKLLASLLLLASISLSTSLISDPKTLTAYDILQQYGFPVGILPIGATGYELNRATGE 60

Query: 61  FSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDL 120
           FSLYL+Q+CKFKIDSYELEYKST+QGVIS+GRIRKLKGVSVKI LLWLSIVEVVNDGDDL
Sbjct: 61  FSLYLNQRCKFKIDSYELEYKSTVQGVISQGRIRKLKGVSVKIVLLWLSIVEVVNDGDDL 120

Query: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 160
           QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS
Sbjct: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 159

[Close]

BLAST of CSPI07G17560 vs. NCBI nr
Match: gi|700189716|gb|KGN44949.1| (hypothetical protein Csa_7G398110 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 3.4e-69
Identity = 135/144 (93.75%), Postives = 138/144 (95.83%), Query Frame = 1


Query: 16  ISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS 75
           +S +  +V   EALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS
Sbjct: 6   VSNALKVVVFREALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS 65

Query: 76  YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS 135
           YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS
Sbjct: 66  YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS 125

Query: 136 FYESPRCGCGFDCDNGAGSLVSAS 160
           FYESPRCGCGFDCDNGAGSLVSAS
Sbjct: 126 FYESPRCGCGFDCDNGAGSLVSAS 149

[Close]

BLAST of CSPI07G17560 vs. NCBI nr
Match: gi|823188091|ref|XP_012490398.1| (PREDICTED: uncharacterized protein At5g01610-like [Gossypium raimondii])

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47
Identity = 92/143 (64.34%), Postives = 114/143 (79.72%), Query Frame = 1


Query: 7   MASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLS 66
           + S++ L  +SL  SL S  + L+AY +LQQY FP GILP G +GY+LNR TGEFS +L 
Sbjct: 3   LRSVIFLILVSLPASLASANDKLSAYQVLQQYDFPAGILPKGVSGYELNRGTGEFSAHLQ 62

Query: 67  QKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGI 126
             C FKIDSYEL YKST+QGVIS GRI  LKGVSVK+   WL IV+V++DGD+++FSVGI
Sbjct: 63  GTCNFKIDSYELSYKSTIQGVISPGRITNLKGVSVKVLFFWLDIVQVIHDGDEMEFSVGI 122

Query: 127 ASANFPLDSFYESPRCGCGFDCD 150
           ASANFP+D+FYESP+CGCGFDC+
Sbjct: 123 ASANFPIDNFYESPQCGCGFDCN 145

[Close]

BLAST of CSPI07G17560 vs. NCBI nr
Match: gi|823148329|ref|XP_012474073.1| (PREDICTED: uncharacterized protein At5g01610-like [Gossypium raimondii])

HSP 1 Score: 193.7 bits (491), Expect = 2.4e-46
Identity = 94/148 (63.51%), Postives = 117/148 (79.05%), Query Frame = 1


Query: 11  LLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCK 70
           L+L S+  S+  V+D + L+AY  LQQY FPVGILP G  GY+LNR TGEFS YLS  CK
Sbjct: 11  LILISLPASSFAVADDDNLSAYQALQQYDFPVGILPNGVVGYELNRETGEFSAYLSGACK 70

Query: 71  FKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASAN 130
           F IDSY+L Y+ST++GVIS GRI  LKGVSVKI   WL+I EV+++GD ++FSVGIASAN
Sbjct: 71  FDIDSYQLSYESTIKGVISPGRITNLKGVSVKILFFWLNIGEVIHNGDQMEFSVGIASAN 130

Query: 131 FPLDSFYESPRCGCGFDCDNGAGSLVSA 159
           FP+D+FYESP+CGCGF+C NG  +L S+
Sbjct: 131 FPIDNFYESPQCGCGFNC-NGLNALASS 157

The following BLAST results are available for this feature:

BLAST of CSPI07G17560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5161_ARATH	1.3e-07	25.26	Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1	[more]

BLAST of CSPI07G17560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7U0_CUCSA	2.4e-69	93.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398110 PE=4 SV=1	[more]
A0A0D2QRM0_GOSRA	1.2e-47	64.34	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G127500 PE=4 SV=1	[more]
A0A0D2R182_GOSRA	1.7e-46	63.51	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G091000 PE=4 SV=1	[more]
A0A0J8C1K9_BETVU	1.6e-44	64.19	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163620 PE=4 S...	[more]
A0A061DQP6_THECC	6.0e-44	59.60	Uncharacterized protein OS=Theobroma cacao GN=TCM_004685 PE=4 SV=1	[more]

BLAST of CSPI07G17560 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02816.1	3.6e-40	57.14	Protein of unknown function, DUF538	[more]
AT4G02370.1	1.5e-38	50.00	Protein of unknown function, DUF538	[more]
AT4G02360.1	1.5e-38	58.20	Protein of unknown function, DUF538	[more]
AT1G02813.1	1.0e-31	45.39	Protein of unknown function, DUF538	[more]
AT5G19590.1	3.8e-18	35.42	Protein of unknown function, DUF538	[more]

BLAST of CSPI07G17560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778728081\|ref\|XP_004136020.2\|	3.9e-81	100.00	PREDICTED: uncharacterized protein LOC101206914 [Cucumis sativus]	[more]
gi\|659101339\|ref\|XP_008451556.1\|	4.5e-77	93.71	PREDICTED: uncharacterized protein LOC103492801 [Cucumis melo]	[more]
gi\|700189716\|gb\|KGN44949.1\|	3.4e-69	93.75	hypothetical protein Csa_7G398110 [Cucumis sativus]	[more]
gi\|823188091\|ref\|XP_012490398.1\|	1.7e-47	64.34	PREDICTED: uncharacterized protein At5g01610-like [Gossypium raimondii]	[more]
gi\|823148329\|ref\|XP_012474073.1\|	2.4e-46	63.51	PREDICTED: uncharacterized protein At5g01610-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G17560.1	CSPI07G17560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 15..148 score: 4.6
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 31..136 score: 7.8
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 6..148 score: 1.44
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 3..150 score: 1.5
None	No IPR available	PANTHER	PTHR31676:SF23	SUBFAMILY NOT NAMED	coord: 3..150 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G17560	Wax gourd	cpiwgoB658
CSPI07G17560	Wax gourd	cpiwgoB666
CSPI07G17560	Wax gourd	cpiwgoB703
CSPI07G17560	Cucurbita maxima (Rimu)	cmacpiB934
CSPI07G17560	Wild cucumber (PI 183967)	cpicpiB167
CSPI07G17560	Cucumber (Gy14) v1	cgycpiB106
CSPI07G17560	Cucumber (Gy14) v1	cgycpiB325
CSPI07G17560	Cucurbita maxima (Rimu)	cmacpiB392
CSPI07G17560	Cucurbita moschata (Rifu)	cmocpiB381
CSPI07G17560	Cucurbita moschata (Rifu)	cmocpiB913
CSPI07G17560	Cucumber (Chinese Long) v2	cpicuB345
CSPI07G17560	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G17560	Melon (DHL92) v3.5.1	cpimeB540
CSPI07G17560	Melon (DHL92) v3.5.1	cpimeB572
CSPI07G17560	Watermelon (Charleston Gray)	cpiwcgB547
CSPI07G17560	Watermelon (Charleston Gray)	cpiwcgB555
CSPI07G17560	Watermelon (Charleston Gray)	cpiwcgB560
CSPI07G17560	Watermelon (97103) v1	cpiwmB578
CSPI07G17560	Watermelon (97103) v1	cpiwmB587
CSPI07G17560	Watermelon (97103) v1	cpiwmB593
CSPI07G17560	Cucurbita pepo (Zucchini)	cpecpiB163
CSPI07G17560	Cucurbita pepo (Zucchini)	cpecpiB344
CSPI07G17560	Bottle gourd (USVL1VR-Ls)	cpilsiB517
CSPI07G17560	Bottle gourd (USVL1VR-Ls)	cpilsiB530
CSPI07G17560	Melon (DHL92) v3.6.1	cpimedB525
CSPI07G17560	Melon (DHL92) v3.6.1	cpimedB557
CSPI07G17560	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G17560	Silver-seed gourd	carcpiB0124
CSPI07G17560	Silver-seed gourd	carcpiB0599
CSPI07G17560	Silver-seed gourd	carcpiB0855
CSPI07G17560	Cucumber (Chinese Long) v3	cpicucB402
CSPI07G17560	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G17560	Watermelon (97103) v2	cpiwmbB541
CSPI07G17560	Watermelon (97103) v2	cpiwmbB564
CSPI07G17560	Watermelon (97103) v2	cpiwmbB590
CSPI07G17560	Watermelon (97103) v2	cpiwmbB598