CSPI07G16490 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGTTGTTTGTTTAAATTTCACAAGCAAAGACGCATTCGCATTGGAGGGAGTCTGCTCTTGTTTTTTTTTTCTTCTTCTTGTTGGCAGAAACGATTGACTGGTCTCGCAGTTCTTGTCTCTATTTCTTATCAACAATGGCTAAAAAATCAGTAAAGTATTTCGTGGTATTTTACTGTAACCTAAACTCTTTCACCTATCTCACATTCCGATTTTGATTTAGATATTTTGAGAAGTGTATATTTTGATTTTTTTTGTAAATGAATCCAAACCAAATAGGTGGATGCATTCACTGACTCAGCGTTCAAGGGAAATCCAGCAGCTGTTTGTTTGTTAGAGGAAGAAATGGATGATAAATGGTTGGCTGATTTAGCGGCTGAGTTGAATATTTGCCAGACCTGTTATTTAATTCCTGTAAACGAAGAAGAAAAAGAAGAAATTGATGATTCAATTAATCCACCCAAGTTTAGACTCAGATGGTTCAATCCTGTTGATGAGGTTTTTTTCTTTTACTGATCAGTTCGATTATTGTTTTGAATACTCTCTTTTTTATTAAAGTTTTGAACCAAATATCCTTCTCGATTTAATTGTCATTTTTCAAAATTTGCATTTGATGGGTTGGTTCGGATCGAGTTGGTTCAACAATCATTCCATCGTTCTTTTTTATATTTCTTAAACCCAAGTGACCTATAATGAACAACATTTCGAGTTAGTCAGATCACTTATTAAAAATTTATTTAATTTCTTTTTCGTGTTAAAGATTAAAACTCAATCTCAAATTACATTTTACATTATGAAATTTTCTTTCCAATGTAAAAAAAGTTAGCCATAAAATTAATAATGAGTTGACGTTTGTTTTTGGTAAATCAATGAAACAAGGGAAATTGTTATGAATAAAAAAATGAAACCATTCCCAATATATCAATGAATTTTGCTTTAATTTGTAAATAGTTTTATTGTTTTGCTATTTTTCAAAATATCGTCACATAAAACAACTCAATCTATAATATTTTCATTTTTTTAACACAACTCAAATCAAATGGGTTGATTGGATTTTTGGAATGAAGTTTTTTTAAATACCCTAATTTGAGTTTTTTTAATTTTTTTTTTTTTTTTTTTTTGTTAAATTCCAAAAATAAAACCAAAATTTTAGACCTTTTTGGTACACCCTTTGTTCTTCCATTTATTTTTTCTTTTAAAATTAAGCCTAATTTCTTGGGATTTCCTTCTTATTGTTTGTATAAGCAAAAGAGTTCACAAGCTTCTTTATTTGTTCTAAAAGTGTTCACTTTATGGTCTGTTTGATAAAGTTTTTTGTTTTTCATTTCTTGTTTCACGTTTTCCGTTTTTTAGAACAAGATATGAAACTATACTTAATAACTATTCCTATTTTCTGTTTCATGTTTTTCTCATTTGTTGTTTTCTTGTTTCTTGTTTCTCATTTCTTGTTTCTTCTTTTTTTTAGAAGAATAGAGATTATATTTGATAACTATTTCTTTTTCTTCTTCCCTATTTTCCGTTGTCCTTATTTATTCTTTTTTTAGAACAAAAGCAGGATAATGTTTGATAACTATTTCGGTTTCTTGTTTACTGTTTCTCGTTTCTTGTCTTTTTAGAAACAGAAATGGAAAACGGGACTATGTTTGACAACTATATATTCATGTTTCTTGTTTTCTATTTCTCTTTTTTGTTTCATGTTTCTCCTTTTATATTTCTCGTTCTTTGTTTCTTCTTTTTTTAGAAATAGAAACGAAACTATGTTTGACAACTATCTCCGTATCTTGGAAAAGAACATAAATGAAAGTTGAGAAATATAAAAAAATAGATAAAAGTTGGGAATTGAACTGAGAACTTAATTCAAAAGTGAATATAAAATGTCTCTCCACCGATTAGCCAAAATTTAAAAGATAATGAAAATAGAATGAAATAAAATGGAGACAGAACTACTAGTGGAACTTCGTATCAACATTCCTTCTACTCTTAAATTTCTTTATTATATATGACCAAAATGTTTTCAGTAGTGTAGAAACAGTTCGAATTAGTGACCAAATTGGACTAAACCAAAAAAAAAAAAAAAAAAAAAAAATTATATGTGAGAAATCAAATGGAAAATCGGTCTTGCGTTTTTTTTTTATAATAATTTATTCCTTACTTTGATCTTCAATCTTCCTTCCTTTCCCTTTTGCTTTTTTTTGTATTTTTTTCTTTTCTTTGGAACATGAATTTACTTTATAGGTGATTAAATGTTTGTATTGGAGTTAATGTGTTGTGGGAACAGAAAGTCACTAAATTCCAAAATCTTTGTGACTGTCTTGTGATTCATCATTATTCGTTCTCTGTGTGGTGTGAATGAATGCCAGATTTTTGTACAAAGAAATATTTGGTTTTGAAATTCTTTTAAACCGAATCCAACTTTATTTGGTTTTGATTCAATTTTTAAAATATGTTCCTAAAAAAACGTTTCAGTTTGTGTGGTTTTAATTCCACCCCTAGTTTTCAAAACTAAACTAATTTGAAATGGTTAAACCTTAACTAATATATTCTATGTAAAAACAACTAGAATTAAAGATTTAAAATCCCAATAAAATGATTGAATTATTGGAGAATTAAATGTTTGGTTAGAGCTTTAAATCGAACCTGAAGTAGTCTCAAAGTCATGCATATGTTGAAGAAATAATGACGCTAGTCTCATATAAGACTATTTTCAAAGTGAAAGTTTTCTTATATGAAAACGAAAAATAAAGCATGGAGCTGGAACAAGGACGGGAAAGTCCTCGTTTCGTGAAAATCCCTAGTTACTTGTATTCGCAACTAAATGAATTGTAACATAATGATTTGGTTGATGTAAATCTTGTTGTTTTTTATTAAGATAAACATTTTTTACAGGTAAAGCAGCTTTGTGGTCATGCAACGTTGGCAGCTGCACACATACTTTTCTCAACTGGTTTGGTAAATTCAAATATTATTGAGTTTTCCACACTTTCAGGAATTCTAACTGCTAAAAGGGTTCCAGATGTCAAGCTTCTTGAGGTTTCAAGTAATGTTCTTAATAGTGGTGAATCACAAGACAGTTACTTCATTGAAATGGATTTCCCAGCTATTCCTACTGTTGAACTCAATTCTGCTGTTGATGTTTCTTTGATCTCCAAAGCTTTGAATGGTGCTTCTATAGTTGACATTAAGACGTGTAACATGAAACCCAATAGACTCTTGGTAAGTAAGCCCTTAGTTTATCTTTGATGTTTTGTTCACAACCCTACTTTTCATTCTTATAATTAAGATTGAGAAACAAAGAAAGCGTAGCCCATCCATGATCGTCGGTCTAGTGAGAAAAAAAAAACAAACGAGAGAGATGGAGCAACAACTAAGAGGTCATGAGTTCAGTGCAAGTTCTTCTCTAAGATTAGCTAGAGTGCTTAAGGTGACTTAGATACTCATAGATATATAAATAAAAAAGGAGAAACGAAGAAAGCCTGGACAATAACATCAACAACATCAACCGAGAGAGTCAGTCTTAGAATACAAGAATATATATATTAAGGTGTGTCACTCCTCTAAACCAGCGTTTTTGCAGGTTGTTCTTCCATCAGAAAAAGATGTTGTAGACTTTCAACCTAATTATGATGAGATACGAAAGTGTCCTGGATCTGGGTTAATCATAAGTGGATTAGCCCCTGCTGAGTCGAAATTTGACTTCTATACTCGACACTTCGCTCCCAAAGTAGGGATCGACGAGGTACAGTACAATCTCAATCTTCTAGTGCTGTATATAGATTGTATATATGCAGCATGCTTTGAGATGAAGCCAATATATGTCATTAGCTTGAACGATCAATGTTCTATTAATGGTTAAATATTTGGTTGTTGTTGCATATTATATACAGGATCCTGTTTGTGGAAGTGCACATTGTGCGTTGGCAGTCTACTGGGCCAATAAGTTGGGCAAATCTGATTTTGTTGCTTTTATGGTACTTTCTCTCTTCCTCCCACTTAAGAGTTACGTAACCAACATGTTGATCAATCCATTGCTTATATCCCATGCAGGGGGTGTTCAAACAAAATTCAATAATCACAAAAAACCCATCAACTCCAACCTAATTCCTGCAGTCTAGACTGGGGTTATCAACTCATTTGACTTGGGTTAGGTTTAAATAAATAAAAATTATTATGGGTTAGGTTTAAATAAATAAAAATTATTATAGGTTAGGTTGGTTAATAGACTTGTCAATTCAAACCTCCAATAAAATAATTAAATCAAAAACAAAAATTTTAATAAATAAATAGAGTAACTCCAACTTATTGAGTTGAGTTCATATATTTTGTTTTTTTATTAAAAAAAAACTATTTTGGATGGAAGAAGTTTACCATCCAAATAATTGAGTTGGATTTAAAGTTTTTATGCCCTACCCACTACCTATTTGTTTAGGGTAACTATAATGCATAACAATTTTAGAATTAATAACTAAGTATATAACAATATTATATTTTAGAAAAATTATAAATATAGAAAGTCGGTTAAAGTTTATTATTTATAGACCATAATCCAAATAAATCATAAGAGTCTATCGTTATAAAATTATAACTCAATATTGGTCTACTTCTCATAGATTTTGCTATATTTACAATTTTTGGAGAATTATGCTATACACTTCATTATTATTTCTAAAAATGATGCATTCCATTATGATTATTTTTTTAAAACAAAATTAACAAGATGGAGTTGGGTATTTTTGTTTGACCCAAAATAAATTCAAGAACTTAAATTAACTCAAATAAGATTATAATAACTTAGGGTAATTATGATGAATTAATCACAATTTTACAATAATAATTAAATGTTTACCACAATTTAAAAGAGTGTAAATATAATAAAGTTCTATCAAAGCTATCGTTGTTAAACACATGTGATCCATCATCTATTACTCATAGATCAATATGTTCTATTAGTGATTAACTTCTATTATATGTTTTCAACTTTTTAAAAATATTTTGGTATGTGAGAATATATTTTGAGCTTATTTACTGTATTTAATTTGCAACCGTGTAACTTTAACTCAATCCATATAATTTGAATGAAGTTTTAGATTTTGTAGTTTTTTTTTAAACTTTTAAAAGCATATTTTTAGGCATCACCAAGGAGTGGAATATTACACATTCATCTTGACGACGAAAAACAAAGGGTTATGTTGCGAGGGAAAGCTATTACTACGGTGGAAGGTTTTGTTTTGGTTTAAAATTTGATGTTCAGACTATATGGTTAAAATAAAAACTTTTAATAAGAACTGTTAGCTATTCAATAATGATATATATGATATCGCTACCTGCATTATCTAATTCCATTTTTCTCAATTATATTTTTAATACAAAG ATGGCTAAAAAATCAGTAAAGTATTTCGTGGTGGATGCATTCACTGACTCAGCGTTCAAGGGAAATCCAGCAGCTGTTTGTTTGTTAGAGGAAGAAATGGATGATAAATGGTTGGCTGATTTAGCGGCTGAGTTGAATATTTGCCAGACCTGTTATTTAATTCCTGTAAACGAAGAAGAAAAAGAAGAAATTGATGATTCAATTAATCCACCCAAGTTTAGACTCAGATGGTTCAATCCTGTTGATGAGGTAAAGCAGCTTTGTGGTCATGCAACGTTGGCAGCTGCACACATACTTTTCTCAACTGGTTTGGTAAATTCAAATATTATTGAGTTTTCCACACTTTCAGGAATTCTAACTGCTAAAAGGGTTCCAGATGTCAAGCTTCTTGAGGTTTCAAGTAATGTTCTTAATAGTGGTGAATCACAAGACAGTTACTTCATTGAAATGGATTTCCCAGCTATTCCTACTGTTGAACTCAATTCTGCTGTTGATGTTTCTTTGATCTCCAAAGCTTTGAATGGTGCTTCTATAGTTGACATTAAGACGTGTAACATGAAACCCAATAGACTCTTGGTTGTTCTTCCATCAGAAAAAGATGTTGTAGACTTTCAACCTAATTATGATGAGATACGAAAGTGTCCTGGATCTGGGTTAATCATAAGTGGATTAGCCCCTGCTGAGTCGAAATTTGACTTCTATACTCGACACTTCGCTCCCAAAGTAGGGATCGACGAGGATCCTGTTTGTGGAAGTGCACATTGTGCGTTGGCAGTCTACTGGGCCAATAAGTTGGGCAAATCTGATTTTGTTGCTTTTATGGCATCACCAAGGAGTGGAATATTACACATTCATCTTGACGACGAAAAACAAAGGGTTATGTTGCGAGGGAAAGCTATTACTACGGTGGAAGGTTTTGTTTTGGTTTAA ATGGCTAAAAAATCAGTAAAGTATTTCGTGGTGGATGCATTCACTGACTCAGCGTTCAAGGGAAATCCAGCAGCTGTTTGTTTGTTAGAGGAAGAAATGGATGATAAATGGTTGGCTGATTTAGCGGCTGAGTTGAATATTTGCCAGACCTGTTATTTAATTCCTGTAAACGAAGAAGAAAAAGAAGAAATTGATGATTCAATTAATCCACCCAAGTTTAGACTCAGATGGTTCAATCCTGTTGATGAGGTAAAGCAGCTTTGTGGTCATGCAACGTTGGCAGCTGCACACATACTTTTCTCAACTGGTTTGGTAAATTCAAATATTATTGAGTTTTCCACACTTTCAGGAATTCTAACTGCTAAAAGGGTTCCAGATGTCAAGCTTCTTGAGGTTTCAAGTAATGTTCTTAATAGTGGTGAATCACAAGACAGTTACTTCATTGAAATGGATTTCCCAGCTATTCCTACTGTTGAACTCAATTCTGCTGTTGATGTTTCTTTGATCTCCAAAGCTTTGAATGGTGCTTCTATAGTTGACATTAAGACGTGTAACATGAAACCCAATAGACTCTTGGTTGTTCTTCCATCAGAAAAAGATGTTGTAGACTTTCAACCTAATTATGATGAGATACGAAAGTGTCCTGGATCTGGGTTAATCATAAGTGGATTAGCCCCTGCTGAGTCGAAATTTGACTTCTATACTCGACACTTCGCTCCCAAAGTAGGGATCGACGAGGATCCTGTTTGTGGAAGTGCACATTGTGCGTTGGCAGTCTACTGGGCCAATAAGTTGGGCAAATCTGATTTTGTTGCTTTTATGGCATCACCAAGGAGTGGAATATTACACATTCATCTTGACGACGAAAAACAAAGGGTTATGTTGCGAGGGAAAGCTATTACTACGGTGGAAGGTTTTGTTTTGGTTTAA
BLAST of CSPI07G16490 vs. Swiss-Prot
Match: Y283_BACHD (Uncharacterized isomerase BH0283 OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=BH0283 PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 5.7e-44 Identity = 112/306 (36.60%), Postives = 165/306 (53.92%), Query Frame = 1
BLAST of CSPI07G16490 vs. Swiss-Prot
Match: PBLD2_MOUSE (Phenazine biosynthesis-like domain-containing protein 2 OS=Mus musculus GN=Pbld2 PE=1 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.5e-39 Identity = 108/306 (35.29%), Postives = 154/306 (50.33%), Query Frame = 1
BLAST of CSPI07G16490 vs. Swiss-Prot
Match: PBLD1_MOUSE (Phenazine biosynthesis-like domain-containing protein 1 OS=Mus musculus GN=Pbld1 PE=1 SV=2) HSP 1 Score: 163.3 bits (412), Expect = 4.2e-39 Identity = 108/307 (35.18%), Postives = 155/307 (50.49%), Query Frame = 1
BLAST of CSPI07G16490 vs. Swiss-Prot
Match: PBLD_HUMAN (Phenazine biosynthesis-like domain-containing protein OS=Homo sapiens GN=PBLD PE=1 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 2.7e-38 Identity = 111/308 (36.04%), Postives = 153/308 (49.68%), Query Frame = 1
BLAST of CSPI07G16490 vs. Swiss-Prot
Match: PBLD_RAT (Phenazine biosynthesis-like domain-containing protein OS=Rattus norvegicus GN=Pbld PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.7e-38 Identity = 108/309 (34.95%), Postives = 155/309 (50.16%), Query Frame = 1
BLAST of CSPI07G16490 vs. TrEMBL
Match: A0A0A0K5Q5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390070 PE=4 SV=1) HSP 1 Score: 617.5 bits (1591), Expect = 9.1e-174 Identity = 306/310 (98.71%), Postives = 308/310 (99.35%), Query Frame = 1
BLAST of CSPI07G16490 vs. TrEMBL
Match: A0A0A0K566_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393460 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 2.5e-147 Identity = 266/309 (86.08%), Postives = 281/309 (90.94%), Query Frame = 1
BLAST of CSPI07G16490 vs. TrEMBL
Match: A0A0A0K8X4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390060 PE=4 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 3.2e-134 Identity = 244/309 (78.96%), Postives = 271/309 (87.70%), Query Frame = 1
BLAST of CSPI07G16490 vs. TrEMBL
Match: A0A0A0K7K6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393450 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 1.9e-126 Identity = 232/310 (74.84%), Postives = 264/310 (85.16%), Query Frame = 1
BLAST of CSPI07G16490 vs. TrEMBL
Match: V4VVN0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021404mg PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 9.6e-107 Identity = 197/309 (63.75%), Postives = 241/309 (77.99%), Query Frame = 1
BLAST of CSPI07G16490 vs. TAIR10
Match: AT4G02860.1 (AT4G02860.1 Phenazine biosynthesis PhzC/PhzF protein) HSP 1 Score: 340.1 bits (871), Expect = 1.4e-93 Identity = 176/310 (56.77%), Postives = 220/310 (70.97%), Query Frame = 1
BLAST of CSPI07G16490 vs. TAIR10
Match: AT1G03210.1 (AT1G03210.1 Phenazine biosynthesis PhzC/PhzF protein) HSP 1 Score: 322.0 bits (824), Expect = 4.0e-88 Identity = 171/310 (55.16%), Postives = 213/310 (68.71%), Query Frame = 1
BLAST of CSPI07G16490 vs. TAIR10
Match: AT4G02850.1 (AT4G02850.1 phenazine biosynthesis PhzC/PhzF family protein) HSP 1 Score: 307.0 bits (785), Expect = 1.3e-83 Identity = 167/327 (51.07%), Postives = 218/327 (66.67%), Query Frame = 1
BLAST of CSPI07G16490 vs. NCBI nr
Match: gi|778727750|ref|XP_004148890.2| (PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Cucumis sativus]) HSP 1 Score: 617.5 bits (1591), Expect = 1.3e-173 Identity = 306/310 (98.71%), Postives = 308/310 (99.35%), Query Frame = 1
BLAST of CSPI07G16490 vs. NCBI nr
Match: gi|449436559|ref|XP_004136060.1| (PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Cucumis sativus]) HSP 1 Score: 529.6 bits (1363), Expect = 3.6e-147 Identity = 266/309 (86.08%), Postives = 281/309 (90.94%), Query Frame = 1
BLAST of CSPI07G16490 vs. NCBI nr
Match: gi|659101003|ref|XP_008451379.1| (PREDICTED: phenazine biosynthesis-like domain-containing protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 513.8 bits (1322), Expect = 2.0e-142 Identity = 252/313 (80.51%), Postives = 280/313 (89.46%), Query Frame = 1
BLAST of CSPI07G16490 vs. NCBI nr
Match: gi|659101007|ref|XP_008451381.1| (PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Cucumis melo]) HSP 1 Score: 490.7 bits (1262), Expect = 1.8e-135 Identity = 247/309 (79.94%), Postives = 272/309 (88.03%), Query Frame = 1
BLAST of CSPI07G16490 vs. NCBI nr
Match: gi|778727753|ref|XP_004148891.2| (PREDICTED: phenazine biosynthesis-like domain-containing protein 2 [Cucumis sativus]) HSP 1 Score: 486.1 bits (1250), Expect = 4.5e-134 Identity = 244/309 (78.96%), Postives = 271/309 (87.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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