CSPI07G15950 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G15950
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 14620513 .. 14620791 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTGGTATTTCAGTGGAATCACTATGAAGCTTTCCCTACAAACGCCTTCTGCTGAACGAAAAGAAGAATCCGAAGTCACTCTAATCAACTACCTCTATTATGTGAAAGAAACAGCGCCACCCGCTCTCCCCAGCACAAAGGGCCACACGAGGAGCATACGACCCAGGATCCGTCTTCGATTGGATTTATTATATCCAGAGTCAGCATCGGAGGGTGAGGAAAGGAGTCATGCACCTCGCCCTGCTCTTCACTCATCCCTTTCACTTCCTTGCTAA

mRNA sequence

ATGGTTTGGTATTTCAGTGGAATCACTATGAAGCTTTCCCTACAAACGCCTTCTGCTGAACGAAAAGAAGAATCCGAAGTCACTCTAATCAACTACCTCTATTATGTGAAAGAAACAGCGCCACCCGCTCTCCCCAGCACAAAGGGCCACACGAGGAGCATACGACCCAGGATCCGTCTTCGATTGGATTTATTATATCCAGAGTCAGCATCGGAGGGTGAGGAAAGGAGTCATGCACCTCGCCCTGCTCTTCACTCATCCCTTTCACTTCCTTGCTAA

Coding sequence (CDS)

ATGGTTTGGTATTTCAGTGGAATCACTATGAAGCTTTCCCTACAAACGCCTTCTGCTGAACGAAAAGAAGAATCCGAAGTCACTCTAATCAACTACCTCTATTATGTGAAAGAAACAGCGCCACCCGCTCTCCCCAGCACAAAGGGCCACACGAGGAGCATACGACCCAGGATCCGTCTTCGATTGGATTTATTATATCCAGAGTCAGCATCGGAGGGTGAGGAAAGGAGTCATGCACCTCGCCCTGCTCTTCACTCATCCCTTTCACTTCCTTGCTAA
Homology
[Close]
BLAST of CSPI07G15950 vs. TrEMBL
Match: A0A0A0K5J8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G380100 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-40
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 1 

Query: 6  SGITMKLSLQTPSAERKEESEVTLINYLYYVKETAPPALPSTKGHTRSIRPRIRLRLDLL 65
          SGITMKLSLQTPSAERKEESEVTLINYLYYVKETAPPALPSTKGHTRSIRPRIRLRLDLL
Sbjct: 8  SGITMKLSLQTPSAERKEESEVTLINYLYYVKETAPPALPSTKGHTRSIRPRIRLRLDLL 67

Query: 66 YPESASEGEERSHAPRPALHSSLSLPC 93
          YPESASEGEE SHAPRPALHSSLSLPC
Sbjct: 68 YPESASEGEEGSHAPRPALHSSLSLPC 94

[Close]
BLAST of CSPI07G15950 vs. NCBI nr
Match: gi|700189540|gb|KGN44773.1| (hypothetical protein Csa_7G380100 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-40
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 1 

Query: 6  SGITMKLSLQTPSAERKEESEVTLINYLYYVKETAPPALPSTKGHTRSIRPRIRLRLDLL 65
          SGITMKLSLQTPSAERKEESEVTLINYLYYVKETAPPALPSTKGHTRSIRPRIRLRLDLL
Sbjct: 8  SGITMKLSLQTPSAERKEESEVTLINYLYYVKETAPPALPSTKGHTRSIRPRIRLRLDLL 67

Query: 66 YPESASEGEERSHAPRPALHSSLSLPC 93
          YPESASEGEE SHAPRPALHSSLSLPC
Sbjct: 68 YPESASEGEEGSHAPRPALHSSLSLPC 94

The following BLAST results are available for this feature:
BLAST of CSPI07G15950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G15950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5J8_CUCSA1.4e-4098.85Uncharacterized protein OS=Cucumis sativus GN=Csa_7G380100 PE=4 SV=1[more]
BLAST of CSPI07G15950 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G15950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189540|gb|KGN44773.1|2.0e-4098.85hypothetical protein Csa_7G380100 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G15950.1CSPI07G15950.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G15950Csa7G380100Cucumber (Chinese Long) v2cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G15950Cucumber (Gy14) v1cgycpiB399
CSPI07G15950Cucumber (Gy14) v1cgycpiB189
CSPI07G15950Cucurbita maxima (Rimu)cmacpiB204
CSPI07G15950Cucurbita maxima (Rimu)cmacpiB392
CSPI07G15950Cucurbita moschata (Rifu)cmocpiB190
CSPI07G15950Cucurbita moschata (Rifu)cmocpiB381
CSPI07G15950Cucurbita moschata (Rifu)cmocpiB913
CSPI07G15950Cucumber (Chinese Long) v2cpicuB332
CSPI07G15950Melon (DHL92) v3.5.1cpimeB526
CSPI07G15950Melon (DHL92) v3.5.1cpimeB565
CSPI07G15950Watermelon (Charleston Gray)cpiwcgB554
CSPI07G15950Watermelon (Charleston Gray)cpiwcgB580
CSPI07G15950Watermelon (Charleston Gray)cpiwcgB588
CSPI07G15950Watermelon (Charleston Gray)cpiwcgB593
CSPI07G15950Watermelon (97103) v1cpiwmB586
CSPI07G15950Watermelon (97103) v1cpiwmB603
CSPI07G15950Watermelon (97103) v1cpiwmB627
CSPI07G15950Watermelon (97103) v1cpiwmB634
CSPI07G15950Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G15950Cucurbita pepo (Zucchini)cpecpiB345
CSPI07G15950Cucurbita pepo (Zucchini)cpecpiB349
CSPI07G15950Bottle gourd (USVL1VR-Ls)cpilsiB496
CSPI07G15950Bottle gourd (USVL1VR-Ls)cpilsiB510
CSPI07G15950Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G15950Melon (DHL92) v3.6.1cpimedB513
CSPI07G15950Melon (DHL92) v3.6.1cpimedB532
CSPI07G15950Cucumber (Gy14) v2cgybcpiB090
CSPI07G15950Cucumber (Gy14) v2cgybcpiB331
CSPI07G15950Silver-seed gourdcarcpiB0125
CSPI07G15950Cucumber (Chinese Long) v3cpicucB389
CSPI07G15950Cucumber (Chinese Long) v3cpicucB414
CSPI07G15950Watermelon (97103) v2cpiwmbB559
CSPI07G15950Watermelon (97103) v2cpiwmbB579
CSPI07G15950Watermelon (97103) v2cpiwmbB573
CSPI07G15950Watermelon (97103) v2cpiwmbB597
CSPI07G15950Wax gourdcpiwgoB710
CSPI07G15950Wax gourdcpiwgoB717
CSPI07G15950Cucurbita maxima (Rimu)cmacpiB934
CSPI07G15950Wild cucumber (PI 183967)cpicpiB095