CSPI07G14380 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G14380
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	Chr7 : 12896094 .. 12897274 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTACCCATAAATGGTTATTGCATCAACTTGACATTAACAATGCTTTTCTGCATGGTAATCTTCAAGAGGAAGTTTATATGGAGCAACCACCTGGGTTTGTTGCTCAGGGTGAGAGTGATAAAGTATGCAACCTTCGATAAACTTTGTATGGTTTGAAACAGAGTCCTTGTGCGTGGTTTGGTAAGTTTAGTCAAACTCCTGTATCCTTTGGTATGCAGAAGAGTACATATGATCATTCAGTTTTCTATCGCCGATCTGATAACGGTATAGTTCTACTTGTTGTATATGTTGATGATATTGTTATTACTGGAAATTATGCATCGGGTATTTTGTCTCTCAAAAATTTCCTTCATGGTTAGTTTTATACGAAAGATTTGGGCCAATTGAAATATTTTTTGGGCATTGAAGTAATGAGAAGCAAGAAAGATATTTATTTCTCATCGAAAATATGTATTTAATTTGTTGTCTGAAACATAAAAATTAGGAGCCAAACCAAGTGGCACTCCTATGATGCCAAATCAACAACTTGTTAAAGGAGATTTATGTAAAGATCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAATAGTGACTCGACTAGACATTGCTTATTCTGTAAGTGTAAATGTTGTAAGTTAGTTCATGTCTTCCCCTACAGCGGATCATTAGGCTGCAGTAGAGCAGATTTTGTGTTATCTGAAAGCTGCTCCTGGATGTGGGATCTTATACAAAGATCATGGACATACGAGAATTGAATGTTTTTCTGATGCTGATTGGGTGGGATCTCGTGAGGATAGAAGATCAACTTCTGGATATTGTGTCTTTGTAGGTGGAAACTTAGTCTCATGGAAGAGTAAGAAAAATAGTATGGATTCACCAACTATTATCTGAGATAGGCTACAGTATTACAGTGCCAGCTAAATTATGGTGTGATAATCAAGCTGCACTTCACATTGCATCTAATCCAGTATTTCGTGAACAAACTAAACATATTAAGGTGGATTGTCACTTCATTTGTGAGAAAATCCAAGATGGGTTGGTGTCCATAGGATATGTAATGACTGGAGAACAATTGGGAGATATTCTAACTAAAGCTTTAAATGGAGGAATGATAAGTTATCTGCGCAACAAGCTGGACGTGATTGACATATTTGCTCCAACTTGA

mRNA sequence

ATGGCTGCTACCCATAAATGGTTATTGCATCAACTTGACATTAACAATGCTTTTCTGCATGGTAATCTTCAAGAGGAAGTTTATATGGAGCAACCACCTGGGTTTGTTGCTCAGGGTGAGAGTGATAAAAAGAGTACATATGATCATTCAGTTTTCTATCGCCGATCTGATAACGGTATAGTTCTACTTGTTGTATATGTTGATGATATTGTTATTACTGGAAATTATGCATCGGGTATTTTGTCTCTCAAAAATTTCCTTCATGGAGCCAAACCAAGTGGCACTCCTATGATGCCAAATCAACAACTTGTTAAAGGAGATTTATGTAAAGATCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAATAGTGACTCGACTAGACATTGCTTATTCTGCTGCAGTAGAGCAGATTTTGTGTTATCTGAAAGCTGCTCCTGGATGTGGGATCTTATACAAAGATCATGGACATACGAGAATTGAATGTTTTTCTGATGCTGATTGGGTGGGATCTCGTGAGGATAGAAGATCAACTTCTGGATATTGTGTCTTTGTAGGTGGAAACTTAGTCTCATGGAAGACTGCACTTCACATTGCATCTAATCCAGTATTTCGTGAACAAACTAAACATATTAAGGTGGATTGTCACTTCATTTGTGAGAAAATCCAAGATGGGTTGGTGTCCATAGGATATGTAATGACTGGAGAACAATTGGGAGATATTCTAACTAAAGCTTTAAATGGAGGAATGATAAGTTATCTGCGCAACAAGCTGGACGTGATTGACATATTTGCTCCAACTTGA

Coding sequence (CDS)

ATGGCTGCTACCCATAAATGGTTATTGCATCAACTTGACATTAACAATGCTTTTCTGCATGGTAATCTTCAAGAGGAAGTTTATATGGAGCAACCACCTGGGTTTGTTGCTCAGGGTGAGAGTGATAAAAAGAGTACATATGATCATTCAGTTTTCTATCGCCGATCTGATAACGGTATAGTTCTACTTGTTGTATATGTTGATGATATTGTTATTACTGGAAATTATGCATCGGGTATTTTGTCTCTCAAAAATTTCCTTCATGGAGCCAAACCAAGTGGCACTCCTATGATGCCAAATCAACAACTTGTTAAAGGAGATTTATGTAAAGATCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAATAGTGACTCGACTAGACATTGCTTATTCTGCTGCAGTAGAGCAGATTTTGTGTTATCTGAAAGCTGCTCCTGGATGTGGGATCTTATACAAAGATCATGGACATACGAGAATTGAATGTTTTTCTGATGCTGATTGGGTGGGATCTCGTGAGGATAGAAGATCAACTTCTGGATATTGTGTCTTTGTAGGTGGAAACTTAGTCTCATGGAAGACTGCACTTCACATTGCATCTAATCCAGTATTTCGTGAACAAACTAAACATATTAAGGTGGATTGTCACTTCATTTGTGAGAAAATCCAAGATGGGTTGGTGTCCATAGGATATGTAATGACTGGAGAACAATTGGGAGATATTCTAACTAAAGCTTTAAATGGAGGAATGATAAGTTATCTGCGCAACAAGCTGGACGTGATTGACATATTTGCTCCAACTTGA

Homology

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BLAST of CSPI07G14380 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.7e-13
Identity = 43/137 (31.39%), Postives = 66/137 (48.18%), Query Frame = 1


Query: 76  YASGILSLKNFLHGAKPSGTPM-MPNQQLVKGDLCKDPERYRRLVGKLNYLIVTRLDIAY 135
           YA  IL+    L   KP  TP+ +     V      DP  +R +VG L YL +TR DI+Y
Sbjct: 61  YAEQILNNAGMLD-CKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 120

Query: 136 SAAV----------------EQILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSREDR 195
           +  +                +++L Y+K     G+    +    ++ F D+DW G    R
Sbjct: 121 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 180

[Close]

BLAST of CSPI07G14380 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09
Identity = 77/328 (23.48%), Postives = 134/328 (40.85%), Query Frame = 1


Query: 21   GNLQEEVY--MEQPPGFVAQGESDKKSTYDHSVF--YRRSD-NGI-----VLLVVYVDDI 80
            GN+ E +Y  +      +A G+  + + +   +   +R +D N I     + + +  D I
Sbjct: 1076 GNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKI 1135

Query: 81   VITGN-YASGILSLKNFLH-GAKPSGTPMMPNQQLVKGDL-CKDPERYRRLVGKLNYLIV 140
             ++ + Y   ILS  N  +  A  +  P   N +L+  D  C  P   R L+G L Y+++
Sbjct: 1136 YLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTP--CRSLIGCLMYIML 1195

Query: 141  -TRLDIA--------YSAA--------VEQILCYLKAAPGCGILYKDH--GHTRIECFSD 200
             TR D+         YS+         ++++L YLK      +++K +     +I  + D
Sbjct: 1196 CTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVD 1255

Query: 201  ADWVGSREDRRSTSGY------------------------------CVFVGGNLVSW--- 260
            +DW GS  DR+ST+GY                               +F       W   
Sbjct: 1256 SDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKF 1315

Query: 261  -------------------KTALHIASNPVFREQTKHIKVDCHFICEKIQDGLVSIGYVM 265
                               +  + IA+NP   ++ KHI +  HF  E++Q+ ++ + Y+ 
Sbjct: 1316 LLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIP 1375

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BLAST of CSPI07G14380 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-08
Identity = 40/120 (33.33%), Postives = 58/120 (48.33%), Query Frame = 1


Query: 1    MAATHKWLLHQLDINNAFLHGNLQEEVYMEQPPGFVAQGESD------------------ 60
            +AA+    + QLD+  AFLHG+L+EE+YMEQP GF   G+                    
Sbjct: 910  LAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQ 969

Query: 61   ---------KKSTY-----DHSVFYRR-SDNGIVLLVVYVDDIVITGNYASGILSLKNFL 88
                     K  TY     D  V+++R S+N  ++L++YVDD++I G     I  LK  L
Sbjct: 970  WYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDL 1029

[Close]

BLAST of CSPI07G14380 vs. TrEMBL
Match: A0A061DJK1_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Theobroma cacao GN=TCM_001639 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.4e-71
Identity = 164/328 (50.00%), Postives = 196/328 (59.76%), Query Frame = 1


Query: 1   MAATHKWLLHQLDINNAFLHGNLQEEVYMEQPPGFVAQGESDK-----KSTY-----DHS 60
           MAAT+ W LHQLDI NA LHG+LQEEVYMEQPP FVAQGE  K     KS Y      H+
Sbjct: 385 MAATYDWPLHQLDIKNALLHGDLQEEVYMEQPPEFVAQGEYGKVYHLRKSLYGLKQNPHA 444

Query: 61  ----------------------VFYRRSDNGIVLLVVYVDDIVITGNYASGILSLKNFLH 120
                                 VFY++S  GI+LLVVYVDDIVITG+  +  L       
Sbjct: 445 WFGKFSETIQEFGMKKSKCDHSVFYKQSKAGIILLVVYVDDIVITGSDTARKL------- 504

Query: 121 GAKPSGTPMMPNQQLVK--GDLCKDPERYRRLVGKLNYLIVTRLDIAYSAAVEQILCYLK 180
           GAKP   PM PN QL K  G+L +DPE+YRRLVGKL+YL VTR DIAYS +V   +    
Sbjct: 505 GAKPCNAPMTPNLQLTKKDGELFEDPEKYRRLVGKLDYLTVTRPDIAYSVSV---VSQFM 564

Query: 181 AAPGCGILYKDHGHTRIECFSDADWVGSREDRRSTSGYCVFVGGNLVSWK---------- 240
           +AP             +E    A+W GS+ DRRST+GYCVF+GGNLVSWK          
Sbjct: 565 SAPTINY------WAALEQILYANWAGSKSDRRSTTGYCVFIGGNLVSWKIWMYQLLSEV 624

Query: 241 ---------------TALHIASNPVFREQTKHIKVDCHFICEKIQDGLVSIGYVMTGEQL 270
                           ALHIASNPVF E+TKHI++D HFI EKIQ   ++ GYV T +QL
Sbjct: 625 GPKSFLPTKLWCDNQAALHIASNPVFHERTKHIEIDYHFIREKIQQKFIATGYVKTKDQL 684

[Close]

BLAST of CSPI07G14380 vs. TrEMBL
Match: A5APJ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035380 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.0e-64
Identity = 155/349 (44.41%), Postives = 191/349 (54.73%), Query Frame = 1


Query: 1   MAATHKWLLHQLDINNAFLHGNLQEEVYMEQPPGFVAQGESDKK---------------- 60
           M A   W L+QLDI NAFLHG+L EEVYMEQP GFVAQGES                   
Sbjct: 634 MDAMRSWPLYQLDIKNAFLHGDLAEEVYMEQPLGFVAQGESGLVCRLRRSLYGLKQSPRA 693

Query: 61  ----------------STYDHSVFYRRSDNG-IVLLVVYVDDIVITG------------- 120
                           ST +H VFY  + +G  + LVVYVDDIVITG             
Sbjct: 694 WFSRFSYVVQEFGMFCSTTNHFVFYHHNSSGQCIYLVVYVDDIVITGIEIAQSSSGVVLS 753

Query: 121 --NYASGILSLKNFLHGAKPSGTPMMPNQQLVKGDLCKDPERYRRLVGKLNYLIVTRLDI 180
              YA  IL   + L   KP  TPM PN   VK +  +DP RYRRLVGKL+YL +TR DI
Sbjct: 754 QRKYALDILEETDMLD-CKPVDTPMDPN---VKLEPLRDPGRYRRLVGKLSYLTITRPDI 813

Query: 181 AYSAAVE----------------QILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSRE 240
            +  ++                 +IL Y+K+ PG G+LY++ GHT++  ++DADWVGS  
Sbjct: 814 YFPVSIVSQLLQSPCDCHWDVVIRILRYIKSTPGQGVLYENRGHTQVVGYTDADWVGSLT 873

Query: 241 DRRSTSGYCVFVGGNLVSWK-----------------------TALHIASNPVFREQTKH 263
           DRRSTSGYCV +GGNL+ WK                       +ALHIASN VF E+TKH
Sbjct: 874 DRRSTSGYCVIIGGNLIYWKSKKQVVVAKFGAEAEYRAMALATSALHIASNLVFHERTKH 933

[Close]

BLAST of CSPI07G14380 vs. TrEMBL
Match: Q6L3Q0_SOLDE (Polyprotein, putative OS=Solanum demissum GN=SDM1_42t00018 PE=4 SV=2)

HSP 1 Score: 245.7 bits (626), Expect = 6.3e-62
Identity = 126/227 (55.51%), Postives = 150/227 (66.08%), Query Frame = 1


Query: 90   AKPSGTPMMPNQQLVK--GDLCKDPERYRRLVGKLNYLIVTRLDIAYS------------ 149
            AKP  TPM+PN QL    GD   DPERYRRLVGKLNYL VTR DI+++            
Sbjct: 1175 AKPCSTPMVPNTQLTNDDGDPFDDPERYRRLVGKLNYLTVTRPDISFAVSIVSQFMSTPT 1234

Query: 150  ----AAVEQILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSREDRRSTSGYCVFVGGN 209
                AA+EQILCYLK APG GI+Y+++ HTRIECF+D DW GS+ DRRST+GYCVFVGGN
Sbjct: 1235 IKHWAALEQILCYLKGAPGLGIVYRNNEHTRIECFADVDWAGSKIDRRSTTGYCVFVGGN 1294

Query: 210  LVSW-----------------------------KTALHIASNPVFREQTKHIKVDCHFIC 269
            LVSW                             + ALHIASNPV+ E+TKHI+VDCHFI 
Sbjct: 1295 LVSWRMQNPSTELWHNPQVRLCGYFNPKLWCDNQAALHIASNPVYHERTKHIEVDCHFIR 1354

[Close]

BLAST of CSPI07G14380 vs. TrEMBL
Match: A5C163_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015916 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.1e-55
Identity = 147/374 (39.30%), Postives = 184/374 (49.20%), Query Frame = 1


Query: 1    MAATHKWLLHQLDINNAFLHGNLQEEVYMEQPPGFVAQGESDK----------------- 60
            MAA   W L+QLDI N FLHG+L EEVYMEQPPGFVAQGES                   
Sbjct: 905  MAAMRSWHLYQLDIKNVFLHGDLVEEVYMEQPPGFVAQGESSLVCRLRRSLYGLKQSPRA 964

Query: 61   ---------------KSTYDHSVFYRRSDNG-IVLLVVYVDDIVITGNYASGI------- 120
                           ++T DHSVFY  + +G  + LVVYVDDIVITG+  +GI       
Sbjct: 965  WFSRFSSVVQEFGMFRNTADHSVFYHHNSSGQCIYLVVYVDDIVITGSDQNGIEIAQSSS 1024

Query: 121  ---LSLKNFLHG---------AKPSGTPMMPNQQLV--KGDLCKDPERYRRLVGKLNYLI 180
               LS + ++            KP  TPM PN +L+  +G    D  RY RLVGKLNYL 
Sbjct: 1025 GEVLSQRKYVLDILEETGTLDCKPVDTPMEPNVKLIPGQGKPLGDLGRYWRLVGKLNYLA 1084

Query: 181  VTRLDIAYSAAVEQILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSREDRRSTSGYCV 240
            +TR +I++                      + GHT++  ++DADW GS  DRRSTSGYCV
Sbjct: 1085 ITRPNISFP---------------------NRGHTQVVGYTDADWAGSPTDRRSTSGYCV 1144

Query: 241  FVGGNLV-----------------------------SW---------------------- 270
            F+GGNL+                              W                      
Sbjct: 1145 FIGGNLISWKSKKQDVVARSSAEAEYRAMTLATCELIWLKYLLPELRFGKDEQMKLICDN 1204

[Close]

BLAST of CSPI07G14380 vs. TrEMBL
Match: A0A061EWC9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024268 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 7.4e-55
Identity = 128/274 (46.72%), Postives = 150/274 (54.74%), Query Frame = 1


Query: 1   MAATHKWLLHQLDINNAFLHGNLQEEVYMEQPPGFVAQGESDK----------------- 60
           M AT+ W LHQLDI NAFLHG+LQ+EVYMEQP G VAQGE  K                 
Sbjct: 444 MVATYDWPLHQLDIKNAFLHGDLQDEVYMEQPLGLVAQGEYGKVCHLQKCLYGLKQSPRA 503

Query: 61  ---------------KSTYDHSVFYRRSDNGIVLLVVYVDDIVITGNYASGILSLKNFLH 120
                          KS  DHSVFY++S+ GI+LLVVYVDDIVITG+             
Sbjct: 504 WFGKFSEVVQEFGMKKSKCDHSVFYKQSEAGIILLVVYVDDIVITGS------------- 563

Query: 121 GAKPSGTPMMPNQQLVKGDLCKDPERYRRLVGKLNYLIVTRLDIAYSAAV---------- 180
                            G+L +D E+YR LVGKLNYL VTR DIAYS +V          
Sbjct: 564 -------------DTADGELFEDSEKYRGLVGKLNYLTVTRPDIAYSVSVVNQFMSDPTI 623

Query: 181 ------EQILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSREDRRSTSGYCVFVGGNL 226
                 +QILCYLK APGCG+ Y +HGHT IECFS+ADW  S+ DRRST+ YCVF+GGNL
Sbjct: 624 NHWTDLKQILCYLKGAPGCGLFYGNHGHTNIECFSNADWASSKSDRRSTTRYCVFIGGNL 683

[Close]

BLAST of CSPI07G14380 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 99.4 bits (246), Expect = 3.7e-21
Identity = 75/249 (30.12%), Postives = 109/249 (43.78%), Query Frame = 1


Query: 76  YASGILSLKNFLHGAKPSGTPMMPNQQLVK---GDLCKDPERYRRLVGKLNYLIVTRLDI 135
           YA  +L     L G KPS  PM P+        GD   D + YRRL+G+L YL +TRLDI
Sbjct: 338 YALDLLDETGLL-GCKPSSVPMDPSVTFSAHSGGDFV-DAKAYRRLIGRLMYLQITRLDI 397

Query: 136 AYSA----------------AVEQILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSRE 195
           +++                 AV +IL Y+K   G G+ Y      +++ FSDA +   ++
Sbjct: 398 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 457

Query: 196 DRRSTSGYCVFVGGNLVSWKT----------------ALHIA------------------ 252
            RRST+GYC+F+G +L+SWK+                AL  A                  
Sbjct: 458 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPL 517

[Close]

BLAST of CSPI07G14380 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 4.4e-14
Identity = 43/137 (31.39%), Postives = 66/137 (48.18%), Query Frame = 1


Query: 76  YASGILSLKNFLHGAKPSGTPM-MPNQQLVKGDLCKDPERYRRLVGKLNYLIVTRLDIAY 135
           YA  IL+    L   KP  TP+ +     V      DP  +R +VG L YL +TR DI+Y
Sbjct: 61  YAEQILNNAGMLD-CKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 120

Query: 136 SAAV----------------EQILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSREDR 195
           +  +                +++L Y+K     G+    +    ++ F D+DW G    R
Sbjct: 121 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 180

[Close]

BLAST of CSPI07G14380 vs. NCBI nr
Match: gi|590709600|ref|XP_007048598.1| (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao])

HSP 1 Score: 275.4 bits (703), Expect = 1.1e-70
Identity = 164/328 (50.00%), Postives = 196/328 (59.76%), Query Frame = 1


Query: 1   MAATHKWLLHQLDINNAFLHGNLQEEVYMEQPPGFVAQGESDK-----KSTY-----DHS 60
           MAAT+ W LHQLDI NA LHG+LQEEVYMEQPP FVAQGE  K     KS Y      H+
Sbjct: 385 MAATYDWPLHQLDIKNALLHGDLQEEVYMEQPPEFVAQGEYGKVYHLRKSLYGLKQNPHA 444

Query: 61  ----------------------VFYRRSDNGIVLLVVYVDDIVITGNYASGILSLKNFLH 120
                                 VFY++S  GI+LLVVYVDDIVITG+  +  L       
Sbjct: 445 WFGKFSETIQEFGMKKSKCDHSVFYKQSKAGIILLVVYVDDIVITGSDTARKL------- 504

Query: 121 GAKPSGTPMMPNQQLVK--GDLCKDPERYRRLVGKLNYLIVTRLDIAYSAAVEQILCYLK 180
           GAKP   PM PN QL K  G+L +DPE+YRRLVGKL+YL VTR DIAYS +V   +    
Sbjct: 505 GAKPCNAPMTPNLQLTKKDGELFEDPEKYRRLVGKLDYLTVTRPDIAYSVSV---VSQFM 564

Query: 181 AAPGCGILYKDHGHTRIECFSDADWVGSREDRRSTSGYCVFVGGNLVSWK---------- 240
           +AP             +E    A+W GS+ DRRST+GYCVF+GGNLVSWK          
Sbjct: 565 SAPTINY------WAALEQILYANWAGSKSDRRSTTGYCVFIGGNLVSWKIWMYQLLSEV 624

Query: 241 ---------------TALHIASNPVFREQTKHIKVDCHFICEKIQDGLVSIGYVMTGEQL 270
                           ALHIASNPVF E+TKHI++D HFI EKIQ   ++ GYV T +QL
Sbjct: 625 GPKSFLPTKLWCDNQAALHIASNPVFHERTKHIEIDYHFIREKIQQKFIATGYVKTKDQL 684

[Close]

BLAST of CSPI07G14380 vs. NCBI nr
Match: gi|147856196|emb|CAN80284.1| (hypothetical protein VITISV_035380 [Vitis vinifera])

HSP 1 Score: 255.0 bits (650), Expect = 1.5e-64
Identity = 155/349 (44.41%), Postives = 191/349 (54.73%), Query Frame = 1


Query: 1   MAATHKWLLHQLDINNAFLHGNLQEEVYMEQPPGFVAQGESDKK---------------- 60
           M A   W L+QLDI NAFLHG+L EEVYMEQP GFVAQGES                   
Sbjct: 634 MDAMRSWPLYQLDIKNAFLHGDLAEEVYMEQPLGFVAQGESGLVCRLRRSLYGLKQSPRA 693

Query: 61  ----------------STYDHSVFYRRSDNG-IVLLVVYVDDIVITG------------- 120
                           ST +H VFY  + +G  + LVVYVDDIVITG             
Sbjct: 694 WFSRFSYVVQEFGMFCSTTNHFVFYHHNSSGQCIYLVVYVDDIVITGIEIAQSSSGVVLS 753

Query: 121 --NYASGILSLKNFLHGAKPSGTPMMPNQQLVKGDLCKDPERYRRLVGKLNYLIVTRLDI 180
              YA  IL   + L   KP  TPM PN   VK +  +DP RYRRLVGKL+YL +TR DI
Sbjct: 754 QRKYALDILEETDMLD-CKPVDTPMDPN---VKLEPLRDPGRYRRLVGKLSYLTITRPDI 813

Query: 181 AYSAAVE----------------QILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSRE 240
            +  ++                 +IL Y+K+ PG G+LY++ GHT++  ++DADWVGS  
Sbjct: 814 YFPVSIVSQLLQSPCDCHWDVVIRILRYIKSTPGQGVLYENRGHTQVVGYTDADWVGSLT 873

Query: 241 DRRSTSGYCVFVGGNLVSWK-----------------------TALHIASNPVFREQTKH 263
           DRRSTSGYCV +GGNL+ WK                       +ALHIASN VF E+TKH
Sbjct: 874 DRRSTSGYCVIIGGNLIYWKSKKQVVVAKFGAEAEYRAMALATSALHIASNLVFHERTKH 933

[Close]

BLAST of CSPI07G14380 vs. NCBI nr
Match: gi|113205323|gb|AAT38747.2| (Polyprotein, putative [Solanum demissum])

HSP 1 Score: 245.7 bits (626), Expect = 9.0e-62
Identity = 126/227 (55.51%), Postives = 150/227 (66.08%), Query Frame = 1


Query: 90   AKPSGTPMMPNQQLVK--GDLCKDPERYRRLVGKLNYLIVTRLDIAYS------------ 149
            AKP  TPM+PN QL    GD   DPERYRRLVGKLNYL VTR DI+++            
Sbjct: 1175 AKPCSTPMVPNTQLTNDDGDPFDDPERYRRLVGKLNYLTVTRPDISFAVSIVSQFMSTPT 1234

Query: 150  ----AAVEQILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSREDRRSTSGYCVFVGGN 209
                AA+EQILCYLK APG GI+Y+++ HTRIECF+D DW GS+ DRRST+GYCVFVGGN
Sbjct: 1235 IKHWAALEQILCYLKGAPGLGIVYRNNEHTRIECFADVDWAGSKIDRRSTTGYCVFVGGN 1294

Query: 210  LVSW-----------------------------KTALHIASNPVFREQTKHIKVDCHFIC 269
            LVSW                             + ALHIASNPV+ E+TKHI+VDCHFI 
Sbjct: 1295 LVSWRMQNPSTELWHNPQVRLCGYFNPKLWCDNQAALHIASNPVYHERTKHIEVDCHFIR 1354

[Close]

BLAST of CSPI07G14380 vs. NCBI nr
Match: gi|147833373|emb|CAN66243.1| (hypothetical protein VITISV_015916 [Vitis vinifera])

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 147/374 (39.30%), Postives = 184/374 (49.20%), Query Frame = 1


Query: 1    MAATHKWLLHQLDINNAFLHGNLQEEVYMEQPPGFVAQGESDK----------------- 60
            MAA   W L+QLDI N FLHG+L EEVYMEQPPGFVAQGES                   
Sbjct: 905  MAAMRSWHLYQLDIKNVFLHGDLVEEVYMEQPPGFVAQGESSLVCRLRRSLYGLKQSPRA 964

Query: 61   ---------------KSTYDHSVFYRRSDNG-IVLLVVYVDDIVITGNYASGI------- 120
                           ++T DHSVFY  + +G  + LVVYVDDIVITG+  +GI       
Sbjct: 965  WFSRFSSVVQEFGMFRNTADHSVFYHHNSSGQCIYLVVYVDDIVITGSDQNGIEIAQSSS 1024

Query: 121  ---LSLKNFLHG---------AKPSGTPMMPNQQLV--KGDLCKDPERYRRLVGKLNYLI 180
               LS + ++            KP  TPM PN +L+  +G    D  RY RLVGKLNYL 
Sbjct: 1025 GEVLSQRKYVLDILEETGTLDCKPVDTPMEPNVKLIPGQGKPLGDLGRYWRLVGKLNYLA 1084

Query: 181  VTRLDIAYSAAVEQILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSREDRRSTSGYCV 240
            +TR +I++                      + GHT++  ++DADW GS  DRRSTSGYCV
Sbjct: 1085 ITRPNISFP---------------------NRGHTQVVGYTDADWAGSPTDRRSTSGYCV 1144

Query: 241  FVGGNLV-----------------------------SW---------------------- 270
            F+GGNL+                              W                      
Sbjct: 1145 FIGGNLISWKSKKQDVVARSSAEAEYRAMTLATCELIWLKYLLPELRFGKDEQMKLICDN 1204

[Close]

BLAST of CSPI07G14380 vs. NCBI nr
Match: gi|590634785|ref|XP_007028466.1| (Uncharacterized protein TCM_024268 [Theobroma cacao])

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54
Identity = 128/274 (46.72%), Postives = 150/274 (54.74%), Query Frame = 1


Query: 1   MAATHKWLLHQLDINNAFLHGNLQEEVYMEQPPGFVAQGESDK----------------- 60
           M AT+ W LHQLDI NAFLHG+LQ+EVYMEQP G VAQGE  K                 
Sbjct: 444 MVATYDWPLHQLDIKNAFLHGDLQDEVYMEQPLGLVAQGEYGKVCHLQKCLYGLKQSPRA 503

Query: 61  ---------------KSTYDHSVFYRRSDNGIVLLVVYVDDIVITGNYASGILSLKNFLH 120
                          KS  DHSVFY++S+ GI+LLVVYVDDIVITG+             
Sbjct: 504 WFGKFSEVVQEFGMKKSKCDHSVFYKQSEAGIILLVVYVDDIVITGS------------- 563

Query: 121 GAKPSGTPMMPNQQLVKGDLCKDPERYRRLVGKLNYLIVTRLDIAYSAAV---------- 180
                            G+L +D E+YR LVGKLNYL VTR DIAYS +V          
Sbjct: 564 -------------DTADGELFEDSEKYRGLVGKLNYLTVTRPDIAYSVSVVNQFMSDPTI 623

Query: 181 ------EQILCYLKAAPGCGILYKDHGHTRIECFSDADWVGSREDRRSTSGYCVFVGGNL 226
                 +QILCYLK APGCG+ Y +HGHT IECFS+ADW  S+ DRRST+ YCVF+GGNL
Sbjct: 624 NHWTDLKQILCYLKGAPGCGLFYGNHGHTNIECFSNADWASSKSDRRSTTRYCVFIGGNL 683

The following BLAST results are available for this feature:

BLAST of CSPI07G14380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
M810_ARATH	7.7e-13	31.39	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0...	[more]
COPIA_DROME	1.0e-09	23.48	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	[more]
POLX_TOBAC	3.4e-08	33.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of CSPI07G14380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061DJK1_THECC	7.4e-71	50.00	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Theobroma cacao GN=TCM_001...	[more]
A5APJ0_VITVI	1.0e-64	44.41	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035380 PE=4 SV=1	[more]
Q6L3Q0_SOLDE	6.3e-62	55.51	Polyprotein, putative OS=Solanum demissum GN=SDM1_42t00018 PE=4 SV=2	[more]
A5C163_VITVI	1.1e-55	39.30	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015916 PE=4 SV=1	[more]
A0A061EWC9_THECC	7.4e-55	46.72	Uncharacterized protein OS=Theobroma cacao GN=TCM_024268 PE=4 SV=1	[more]

BLAST of CSPI07G14380 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23160.1	3.7e-21	30.12	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	4.4e-14	31.39	ATMG00810.1 DNA/RNA polymerases superfamily protein	[more]

BLAST of CSPI07G14380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|590709600\|ref\|XP_007048598.1\|	1.1e-70	50.00	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]	[more]
gi\|147856196\|emb\|CAN80284.1\|	1.5e-64	44.41	hypothetical protein VITISV_035380 [Vitis vinifera]	[more]
gi\|113205323\|gb\|AAT38747.2\|	9.0e-62	55.51	Polyprotein, putative [Solanum demissum]	[more]
gi\|147833373\|emb\|CAN66243.1\|	1.6e-55	39.30	hypothetical protein VITISV_015916 [Vitis vinifera]	[more]
gi\|590634785\|ref\|XP_007028466.1\|	1.1e-54	46.72	Uncharacterized protein TCM_024268 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013103	RVT_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G14380.1	CSPI07G14380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 44..87 score: 7.6E-6coord: 1..43 score: 1.2
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 2..197 score: 1.2
None	No IPR available	PANTHER	PTHR11439:SF185	SUBFAMILY NOT NAMED	coord: 2..197 score: 1.2
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 5..215 score: 4.89

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G14380	Cucurbita maxima (Rimu)	cmacpiB388
CSPI07G14380	Cucurbita moschata (Rifu)	cmocpiB377
CSPI07G14380	Cucurbita moschata (Rifu)	cmocpiB913
CSPI07G14380	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G14380	Melon (DHL92) v3.5.1	cpimeB536
CSPI07G14380	Melon (DHL92) v3.5.1	cpimeB527
CSPI07G14380	Watermelon (Charleston Gray)	cpiwcgB554
CSPI07G14380	Watermelon (97103) v1	cpiwmB586
CSPI07G14380	Cucurbita pepo (Zucchini)	cpecpiB159
CSPI07G14380	Cucurbita pepo (Zucchini)	cpecpiB338
CSPI07G14380	Bottle gourd (USVL1VR-Ls)	cpilsiB517
CSPI07G14380	Melon (DHL92) v3.6.1	cpimedB513
CSPI07G14380	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G14380	Silver-seed gourd	carcpiB0099
CSPI07G14380	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G14380	Watermelon (97103) v2	cpiwmbB597
CSPI07G14380	Wax gourd	cpiwgoB717
CSPI07G14380	Cucurbita maxima (Rimu)	cmacpiB934
CSPI07G14380	Cucumber (Gy14) v1	cgycpiB079