CSPI07G13890 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGAATTTTGAGTTATTTGGTTGTATTATTTGTTGTTCTTCATCAGCAACATTTCTTTGTGGGAGCTGTTCTTCCACCAGCAATTGTTAATAAATGGCATATCCATGTGATTAATGGACTAAGCAATGGAAAATTAATGGCTCATTGTAAATCAAGAGATACTGATATTGGAGAACAATATATTGATCATGGATCTGAAATTCAATGGAGTTTCAAGGAAAATGTTTTTGGTTCAACTTTGTTTTGGTGTTTTATGAGGACACCAAATGGTAGTTTTTCCTCTTTTGAGGTGTTTTGGCATGAAACTCAACATTATTGGCTTCATTACAGGTGCACTTTAGATCAAGGAACTTGTTACTGGATAGCTAAAGATGATGGAATTTACTTGAGAAATATTCCAGATAGTATCGATGAAAAGATTCATGAATGGAAAAAAGCA ATGGGTAGAATTTTGAGTTATTTGGTTGTATTATTTGTTGTTCTTCATCAGCAACATTTCTTTGTGGGAGCTGTTCTTCCACCAGCAATTGTTAATAAATGGCATATCCATGTGATTAATGGACTAAGCAATGGAAAATTAATGGCTCATTGTAAATCAAGAGATACTGATATTGGAGAACAATATATTGATCATGGATCTGAAATTCAATGGAGTTTCAAGGAAAATGTTTTTGGTTCAACTTTGTTTTGGTGTTTTATGAGGACACCAAATGGTAGTTTTTCCTCTTTTGAGGTGTTTTGGCATGAAACTCAACATTATTGGCTTCATTACAGGTGCACTTTAGATCAAGGAACTTGTTACTGGATAGCTAAAGATGATGGAATTTACTTGAGAAATATTCCAGATAGTATCGATGAAAAGATTCATGAATGGAAAAAAGCA ATGGGTAGAATTTTGAGTTATTTGGTTGTATTATTTGTTGTTCTTCATCAGCAACATTTCTTTGTGGGAGCTGTTCTTCCACCAGCAATTGTTAATAAATGGCATATCCATGTGATTAATGGACTAAGCAATGGAAAATTAATGGCTCATTGTAAATCAAGAGATACTGATATTGGAGAACAATATATTGATCATGGATCTGAAATTCAATGGAGTTTCAAGGAAAATGTTTTTGGTTCAACTTTGTTTTGGTGTTTTATGAGGACACCAAATGGTAGTTTTTCCTCTTTTGAGGTGTTTTGGCATGAAACTCAACATTATTGGCTTCATTACAGGTGCACTTTAGATCAAGGAACTTGTTACTGGATAGCTAAAGATGATGGAATTTACTTGAGAAATATTCCAGATAGTATCGATGAAAAGATTCATGAATGGAAAAAAGCA
BLAST of CSPI07G13890 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.4e-31 Identity = 62/116 (53.45%), Postives = 82/116 (70.69%), Query Frame = 1
BLAST of CSPI07G13890 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.2e-27 Identity = 55/117 (47.01%), Postives = 80/117 (68.38%), Query Frame = 1
BLAST of CSPI07G13890 vs. TrEMBL
Match: V4VUI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 6.8e-26 Identity = 61/141 (43.26%), Postives = 85/141 (60.28%), Query Frame = 1
BLAST of CSPI07G13890 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.2e-25 Identity = 62/141 (43.97%), Postives = 85/141 (60.28%), Query Frame = 1
BLAST of CSPI07G13890 vs. TrEMBL
Match: A0A0D2R2C1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G224300 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 7.5e-25 Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 1
BLAST of CSPI07G13890 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08 Identity = 30/97 (30.93%), Postives = 52/97 (53.61%), Query Frame = 1
BLAST of CSPI07G13890 vs. TAIR10
Match: AT3G26880.1 (AT3G26880.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 54.3 bits (129), Expect = 7.4e-08 Identity = 30/93 (32.26%), Postives = 46/93 (49.46%), Query Frame = 1
BLAST of CSPI07G13890 vs. TAIR10
Match: AT1G11765.1 (AT1G11765.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07 Identity = 31/107 (28.97%), Postives = 55/107 (51.40%), Query Frame = 1
BLAST of CSPI07G13890 vs. TAIR10
Match: AT4G16195.1 (AT4G16195.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 52.8 bits (125), Expect = 2.2e-07 Identity = 33/118 (27.97%), Postives = 56/118 (47.46%), Query Frame = 1
BLAST of CSPI07G13890 vs. NCBI nr
Match: gi|449443935|ref|XP_004139731.1| (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus]) HSP 1 Score: 149.4 bits (376), Expect = 4.8e-33 Identity = 59/120 (49.17%), Postives = 87/120 (72.50%), Query Frame = 1
BLAST of CSPI07G13890 vs. NCBI nr
Match: gi|659124353|ref|XP_008462114.1| (PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]) HSP 1 Score: 146.7 bits (369), Expect = 3.1e-32 Identity = 72/147 (48.98%), Postives = 93/147 (63.27%), Query Frame = 1
BLAST of CSPI07G13890 vs. NCBI nr
Match: gi|470112332|ref|XP_004292390.1| (PREDICTED: uncharacterized protein LOC101314627 [Fragaria vesca subsp. vesca]) HSP 1 Score: 145.2 bits (365), Expect = 9.1e-32 Identity = 60/114 (52.63%), Postives = 80/114 (70.18%), Query Frame = 1
BLAST of CSPI07G13890 vs. NCBI nr
Match: gi|659124369|ref|XP_008462123.1| (PREDICTED: uncharacterized protein LOC103500552 [Cucumis melo]) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31 Identity = 70/142 (49.30%), Postives = 92/142 (64.79%), Query Frame = 1
BLAST of CSPI07G13890 vs. NCBI nr
Match: gi|449443917|ref|XP_004139722.1| (PREDICTED: uncharacterized protein LOC101205020 [Cucumis sativus]) HSP 1 Score: 144.1 bits (362), Expect = 2.0e-31 Identity = 71/144 (49.31%), Postives = 93/144 (64.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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