CSPI07G13680 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G13680
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Leucine-rich repeat, ribonuclease inhibitor subtype
Location	Chr7 : 12201204 .. 12204055 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGATAATCCTATTGAGGATGATGGAATCAGGTCCTTCTTACCTCTTTAGTTTTTATTTATTTATGTATTTATTTGTTTTTATTATTATTGTATGTTATTTAGCTCTCTTATAGGCGAGTTTTTTCCAACCTTGTGGATTTACAGGAATTTAATCCCCTATTTTATTGAAGCTTCTGAAAGAAACTGTCCCTTTGCTGATCTGAATTTAGAGAACTGTGAGCTTTCATGTGATGGAGTCACGCAACTCTTGAATGTGCTGTCAACTTTAAGGAAACCACTGAGGTCTCTTTCTGTTGCAGATAATAGCCTTGGAAGGTTTGTATATCTGAAAATAGCCTGAAATCATCACTATCTTATATTTTCCAATCAAATATTTGAATGGTGTGTACTCTTGTTTTGAAGCTCGGTAGCAGGAGCTTTGGGCGTTTTCATGGGGAAATCAATTCAAATACTGAATGTTGAAGGCATTGGCTTGGGTCCATGTGGGTTTCAGGATTTAGTTGAAGGGGTAACTGCAGGGTCAAATATTGTGAACATCAACATGAGGTTCAAAATTAAAATTTACGAACTGCTTCATTATTCTTTTTTCAAAATGGCCCTAAAATATAAATGATTTTTATTGTAGTAAAAATCGTGGTGGAATAGAGATAGCAACATTTTTGTTGAAGCTTTTGTCTGGGGCATCAGATCTTGTTTCTGTCAATGCATCTTACAATCTAATGCCCGTTGAATCCTTAGACATCATACGTTCTGCCCTGAAAATTGCTAAAGGTACATTGTCAAGTTGAATGAAATTTAAGTTACCACCTTACCATTGAATTTTTCCTGTTAGTTTGTTATAGCCATGTATCTGGTTTGAGGTTTAAAACCATTCAAGGCTTGAGCTGGGTGATCTACCCTTTGCAGTATCCTCCTTGTCCTTGCTCTTTTCTTTCTCAGGGCTGGTGTTCCTACTAGATCATCAAATGATGAGGCTGTGTTAGATACCTAGATTAGTATACATGGGTTTACCTTGTATAAGGGTAATTAGATTAATATAGGGTAGGGGTCTAAGGGTAATTGGATAATTAGGAAGTTACTAGTAGTTGTTGTGCAAGTGTGGTTACTAGGGTGGTTACATCTTGTTATAAATGGAGGGAGGGTAAGTGAGAGGGGGGATTATTCTATGTAGTGATTTAGGGCTTGGGTGAGAGTACTCAAGAGGGAGGTTCCAAGTGCCTTATACTTGGGTTTATCTTGTATTTTCATACAGTTCATTATAATAAATTAAGATCTTGTTCTTGTAGCAAGTGTTCTAACAGGCTGCATCCTACATTTTTTTTCTCACCAGTCTCCTTAAAAATTGGAATAAGCTTCTGGACTACTGCAACTTCTAGGCGCTTCCTTAAAATACTTGGGAGTTTACTCATTAATTGCTTGATTTTATTTTGGATAGAAAATCAAATAATGAAAGCTCATGAATGGCTAAGGGGACATGGAGCTAAGAAACAAACATTTAAACTAAAAGCGGCAACTGTTAGTAATCACAAAACAGCACACATACACACAAAGAAGGATGTATAATTTTTGTTTCCCTGGTAGCTCCGTGTCCCAAGAGGCCGTTTTTCTGTGGTTTGCAGGGTTGTATGCAGTGTTATGAGATTTTTGAGGGAGTGGAATGTTAGAGTGTTCAAAGGAAGGGACAGGACCCTTGTGAGGTTTGGTTCTTAGTGAAGTTTCATGTGTCCCTTGGGGGTTTCAATTTCAAAACTTCTTTTGTAGCTATTCTGTTGGTAACGTTTTACTTAGTTGGAACTCCTTCCTTTAGTAGGGGTATTTTGATGGACTCGTTTTTTATATGCTCTTGTATTCTTTCATTTTATTTTTCAATGAAAATATACCTGAAAATAAATTATATCCCAAATTTTCCAGTTTAGATGTTCTACAAATGTATTGAACTCTCAGTTTTCATGAATTCTGCTTCGGCAGTTACACATATCCAAACACAAACATTAGTGCCTTGGAAGAAGATTTTTCAATATGAACTAAATGTTTGTTGCCGCCTGAGATAACTGATGTTATTTATTGATGTAAGCTACTGAGTATAATATTATCTTTCAGAATTTATGATATGCTATTTCTTTATGTTTGCGGAGCGATATCATACTCAAGGCTTTGTCTTAAAATATAGGTAAACTTGAGCTATTGGACTTGAGGGGAAATAATTGGGATGATCAAAAGGCTCAAGATTCACTGGTTGCAGAGTTTCAGAACAGTGTCAAGAAAATTTTAATATATTCATCATCACCAAATTTAGATGGACTTTATGACGCCGATCCGTAGTTGACTTGGCTGTGGTATCATGACTATTCAAGCTAAGGAAATTATTGGGACTCAATTTACAACCCACCAACATGCATTGTCAAGTTGTCTTTGACATTGTTAGTTTTTTTGCTTTATTTATAACTTATTTTTGCCTTCACTTCTAGTAGTAAAAGCAGATAGTGCATCCTTGATTATGCTCAGTTATTGGTAAATGCATTTAGCTGTAAAGAAATAATGTATGTAGAAAACATATATCATTGATTATTATTTATAGAAATAGGACCTTCTGTGTCAGACCCTTGCCACCAATTATTGTGGCTGAATGTGCTTTGAAGATGTAATTATGTGGCTCAAGAATGATTTACAATCAATGTTATATTTTATTTTATACTTTTGCGTGTGATTATGTTTTTTTTTTTTTTCTCGCTGTCGTTGTGCTTCAGGTTCTCTCATGTAGATGAATGGGAAGATGAAATTTCTGCTTTGGGGAGTGCAGTTGCAACCAAGGAAACTCCTAAACCTTTGTGGACTTCTGTGTGCTAG

mRNA sequence

ATGAGTGATAATCCTATTGAGGATGATGGAATCAGGAATTTAATCCCCTATTTTATTGAAGCTTCTGAAAGAAACTGTCCCTTTGCTGATCTGAATTTAGAGAACTGTGAGCTTTCATGTGATGGAGTCACGCAACTCTTGAATGTGCTGTCAACTTTAAGGAAACCACTGAGGTCTCTTTCTGTTGCAGATAATAGCCTTGGAAGCTCGGTAGCAGGAGCTTTGGGCGTTTTCATGGGGAAATCAATTCAAATACTGAATGTTGAAGGCATTGGCTTGGGTCCATGTGGGTTTCAGGATTTAGTTGAAGGGGTAACTGCAGGGTCAAATATTGTGAACATCAACATGAGTAAAAATCGTGGTGGAATAGAGATAGCAACATTTTTGTTGAAGCTTTTGTCTGGGGCATCAGATCTTGTTTCTGTCAATGCATCTTACAATCTAATGCCCGTTGAATCCTTAGACATCATACGTTCTGCCCTGAAAATTGCTAAAGGTAAACTTGAGCTATTGGACTTGAGGGGAAATAATTGGGATGATCAAAAGGCTCAAGATTCACTGGTTGCAGAGTTTCAGAACAGTGTCAAGAAAATTTTAATATATTCATCATCACCAAATTTAGATGGACTTTATGACGCCGATCCAAATAGGACCTTCTGTGTCAGACCCTTGCCACCAATTATTGTGGCTGAATGTGCTTTGAAGATGTTCTCTCATGTAGATGAATGGGAAGATGAAATTTCTGCTTTGGGGAGTGCAGTTGCAACCAAGGAAACTCCTAAACCTTTGTGGACTTCTGTGTGCTAG

Coding sequence (CDS)

ATGAGTGATAATCCTATTGAGGATGATGGAATCAGGAATTTAATCCCCTATTTTATTGAAGCTTCTGAAAGAAACTGTCCCTTTGCTGATCTGAATTTAGAGAACTGTGAGCTTTCATGTGATGGAGTCACGCAACTCTTGAATGTGCTGTCAACTTTAAGGAAACCACTGAGGTCTCTTTCTGTTGCAGATAATAGCCTTGGAAGCTCGGTAGCAGGAGCTTTGGGCGTTTTCATGGGGAAATCAATTCAAATACTGAATGTTGAAGGCATTGGCTTGGGTCCATGTGGGTTTCAGGATTTAGTTGAAGGGGTAACTGCAGGGTCAAATATTGTGAACATCAACATGAGTAAAAATCGTGGTGGAATAGAGATAGCAACATTTTTGTTGAAGCTTTTGTCTGGGGCATCAGATCTTGTTTCTGTCAATGCATCTTACAATCTAATGCCCGTTGAATCCTTAGACATCATACGTTCTGCCCTGAAAATTGCTAAAGGTAAACTTGAGCTATTGGACTTGAGGGGAAATAATTGGGATGATCAAAAGGCTCAAGATTCACTGGTTGCAGAGTTTCAGAACAGTGTCAAGAAAATTTTAATATATTCATCATCACCAAATTTAGATGGACTTTATGACGCCGATCCAAATAGGACCTTCTGTGTCAGACCCTTGCCACCAATTATTGTGGCTGAATGTGCTTTGAAGATGTTCTCTCATGTAGATGAATGGGAAGATGAAATTTCTGCTTTGGGGAGTGCAGTTGCAACCAAGGAAACTCCTAAACCTTTGTGGACTTCTGTGTGCTAG

Homology

[Close]

BLAST of CSPI07G13680 vs. Swiss-Prot
Match: NALP5_BOVIN (NACHT, LRR and PYD domains-containing protein 5 OS=Bos taurus GN=NLRP5 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.4e-08
Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = 1


Query: 1    MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKP-LRS 60
            +S NP+ED G+  L    +E S   CP  DL+L NC L+      L NV++  R P LRS
Sbjct: 914  LSMNPLEDPGMNLLCEVMMEPS---CPLRDLDLVNCRLTASCCKSLSNVIT--RSPRLRS 973

Query: 61   LSVADNSLGSSVAGAL--GVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMS 120
            L +A N+LG     AL  G+    ++  L +E  GL   G + L   +T   ++ ++N+ 
Sbjct: 974  LDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSRHLASLNLM 1030

[Close]

BLAST of CSPI07G13680 vs. TrEMBL
Match: A0A0A0K4G5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G330390 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 4.1e-114
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL
Sbjct: 319 MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 378

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMSKNR 120
           SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNIN+SKNR
Sbjct: 379 SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINISKNR 438

Query: 121 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 180
           GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD
Sbjct: 439 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 498

Query: 181 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
           QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP
Sbjct: 499 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 533

[Close]

BLAST of CSPI07G13680 vs. TrEMBL
Match: M5VNW6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003067mg PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 6.4e-67
Identity = 137/215 (63.72%), Postives = 165/215 (76.74%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           MSDNPIED GIR+LIPYF+EASE+  PFADL LENCELSC GVT L++ LSTL++PL+SL
Sbjct: 393 MSDNPIEDAGIRSLIPYFVEASEKCFPFADLMLENCELSCHGVTYLIDTLSTLQRPLKSL 452

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMSKNR 120
           SVADN LGS VA ALG  +  SIQILNVEGIGLG  GFQ+L +G+T    +V +N+SKNR
Sbjct: 453 SVADNDLGSQVAAALGKLLSTSIQILNVEGIGLGSSGFQELQDGITKELKLVKVNISKNR 512

Query: 121 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 180
           GGIE A FL KL+S A +LV+V+A+YNLMP++SL  I SALK AKG +E LDLRGN WD 
Sbjct: 513 GGIETANFLSKLISMAPELVTVDAAYNLMPLKSLTTICSALKAAKGNIERLDLRGNIWDY 572

Query: 181 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
           Q    S+ A+ Q + + +LI SSSP  D  YD DP
Sbjct: 573 QPGYASMHADIQCNGRPVLILSSSPTPDAPYDDDP 607

[Close]

BLAST of CSPI07G13680 vs. TrEMBL
Match: A0A067JRC0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17590 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63
Identity = 132/215 (61.40%), Postives = 162/215 (75.35%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           +SDNPIED+GIR LIPYF+E  ER     +LNLENCELSCDGVTQLL+ LS L++P++SL
Sbjct: 389 LSDNPIEDEGIRCLIPYFVEPLERFSSLVELNLENCELSCDGVTQLLDTLSALQRPIKSL 448

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMSKNR 120
           S+ADN LGS VAGALG F+  SI+ L++ GIGLG  GF++L + + A   +V IN+SKNR
Sbjct: 449 SLADNGLGSPVAGALGKFLSTSIRELDIGGIGLGSAGFEELQKEMMADLKLVKINISKNR 508

Query: 121 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 180
           GG+E A FL KL+S A D+VSV+ASYNLMP ESL II SALK AKG LE LDL GN WD 
Sbjct: 509 GGLETAKFLSKLMSSAPDIVSVDASYNLMPTESLIIICSALKAAKGNLECLDLNGNTWDW 568

Query: 181 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
           Q+A  S++AEFQ++ + ILI   S   D  YD DP
Sbjct: 569 QQAHASILAEFQHNGRPILILPLSRATDVPYDDDP 603

[Close]

BLAST of CSPI07G13680 vs. TrEMBL
Match: A0A061DW66_THECC (RNI-like superfamily protein, putative OS=Theobroma cacao GN=TCM_003751 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.5e-63
Identity = 136/215 (63.26%), Postives = 160/215 (74.42%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           +SDNPIEDDGIR+LIPYF EAS+   P  DLNLENCELS DGVTQLL+ LS++ KPL SL
Sbjct: 390 LSDNPIEDDGIRSLIPYFAEASKMFIPLTDLNLENCELSYDGVTQLLDALSSVGKPLNSL 449

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMSKNR 120
           SVADN LGS VA ALG F G SIQ+LN+EGIGLGP GF+ L +       +V IN+SKNR
Sbjct: 450 SVADNGLGSQVAEALGNFWGTSIQVLNLEGIGLGPSGFRKLKDVGMEDLMLVEINISKNR 509

Query: 121 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 180
           GGIE A FL KL+  A  L++VNA+YNLMPVESL II SALK A G LE +DL GN WD 
Sbjct: 510 GGIETAKFLSKLIRQAPKLIAVNAAYNLMPVESLIIICSALKTATGHLEQVDLTGNIWDY 569

Query: 181 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
           Q + D+++AEFQ++ + ILI  SS   D  YD DP
Sbjct: 570 QPSHDTMLAEFQHNGRPILILPSSVASDVPYDDDP 604

[Close]

BLAST of CSPI07G13680 vs. TrEMBL
Match: V4T9D8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019392mg PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.1e-61
Identity = 128/215 (59.53%), Postives = 162/215 (75.35%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           +SDN IEDDGIR+LIPYF++ASER  P  +L LENCELS  GV+QLL+ LSTLR+P  SL
Sbjct: 335 ISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQLLDTLSTLRRPPTSL 394

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMSKNR 120
           S+ADN+LGS +A +LG F G S+Q+LN+  IGLG  GF+ L +GVT    +VNIN+SKNR
Sbjct: 395 SIADNNLGSHIAASLGKFFGTSVQVLNIGAIGLGSSGFRVLQDGVTKELKLVNINISKNR 454

Query: 121 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 180
           GG+E A FL KL+S A DLV VNA YNLMP+ESL II SALK+AKG L+ LDL GNNW+ 
Sbjct: 455 GGVETAKFLSKLMSLAPDLVEVNAGYNLMPLESLTIICSALKVAKGHLQRLDLTGNNWEL 514

Query: 181 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
           Q +  S+++EF+++   ILI  +   LD  YD +P
Sbjct: 515 QPSHVSMLSEFRHNGLPILILPTLQALDVPYDDEP 549

[Close]

BLAST of CSPI07G13680 vs. TAIR10
Match: AT2G20210.1 (AT2G20210.1 RNI-like superfamily protein)

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-45
Identity = 107/217 (49.31%), Postives = 142/217 (65.44%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           +S NPIED GIR+LI YF +  +     ADLNLENCELSC GV + L+ LS L KPL+ L
Sbjct: 390 LSGNPIEDSGIRSLISYFTKNPDSR--LADLNLENCELSCCGVIEFLDTLSMLEKPLKFL 449

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGV-TAGSNIVNINMSKN 120
           SVADN+LGS VA A+      SI+ LN+ GIGLGP GF  L   +      +++IN+SKN
Sbjct: 450 SVADNALGSEVAEAVVNSFTISIESLNIMGIGLGPLGFLALGRKLEKVSKKLLSINISKN 509

Query: 121 RGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWD 180
           RGG+E A FL KL+  A  L+S++ASYNLMP E+L ++  +L+ AKG L+ LD+ GN+  
Sbjct: 510 RGGLETARFLSKLIPLAPKLISIDASYNLMPPEALLMLCDSLRTAKGDLKRLDMTGNSCI 569

Query: 181 DQKA-QDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
             +A   SL+ EFQ++ + I +  SS      YD DP
Sbjct: 570 SHEADHSSLLHEFQHNGEPIFVLPSSSVSHVPYDDDP 604

[Close]

BLAST of CSPI07G13680 vs. NCBI nr
Match: gi|449443929|ref|XP_004139728.1| (PREDICTED: protein NLRC3 isoform X1 [Cucumis sativus])

HSP 1 Score: 419.1 bits (1076), Expect = 5.9e-114
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL
Sbjct: 390 MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 449

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMSKNR 120
           SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNIN+SKNR
Sbjct: 450 SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINISKNR 509

Query: 121 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 180
           GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD
Sbjct: 510 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 569

Query: 181 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
           QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP
Sbjct: 570 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 604

[Close]

BLAST of CSPI07G13680 vs. NCBI nr
Match: gi|700189322|gb|KGN44555.1| (hypothetical protein Csa_7G330390 [Cucumis sativus])

HSP 1 Score: 419.1 bits (1076), Expect = 5.9e-114
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL
Sbjct: 319 MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 378

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMSKNR 120
           SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNIN+SKNR
Sbjct: 379 SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINISKNR 438

Query: 121 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 180
           GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD
Sbjct: 439 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 498

Query: 181 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
           QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP
Sbjct: 499 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 533

[Close]

BLAST of CSPI07G13680 vs. NCBI nr
Match: gi|659124100|ref|XP_008461989.1| (PREDICTED: protein NLRC3 isoform X1 [Cucumis melo])

HSP 1 Score: 404.1 bits (1037), Expect = 2.0e-109
Identity = 207/215 (96.28%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           +SDNPIEDDGIRNLIPYFIEASER+ PFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL
Sbjct: 390 ISDNPIEDDGIRNLIPYFIEASERSFPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 449

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMSKNR 120
           SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVT GSNIVNIN+SKNR
Sbjct: 450 SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTEGSNIVNINISKNR 509

Query: 121 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 180
           GGIEIATFLLKLLSG SDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD
Sbjct: 510 GGIEIATFLLKLLSGGSDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 569

Query: 181 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
           QKAQDSLVAEFQNSVKKILIYSSSP LDGLYD DP
Sbjct: 570 QKAQDSLVAEFQNSVKKILIYSSSPTLDGLYDGDP 604

[Close]

BLAST of CSPI07G13680 vs. NCBI nr
Match: gi|1009149624|ref|XP_015892577.1| (PREDICTED: uncharacterized protein LOC107426804 [Ziziphus jujuba])

HSP 1 Score: 266.9 bits (681), Expect = 3.8e-68
Identity = 134/215 (62.33%), Postives = 164/215 (76.28%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           +S+NPIEDDGIRNLIPYF++ASE + PFADLNLENCELSCDGVTQL+N LSTL KPL+SL
Sbjct: 394 ISENPIEDDGIRNLIPYFVQASENSYPFADLNLENCELSCDGVTQLINTLSTLTKPLKSL 453

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMSKNR 120
           SVADN LG  VA ALG ++  SI++LN+ GIGL   GF+DL + +T    +V IN+SKNR
Sbjct: 454 SVADNVLGGHVAAALGKYLSTSIRVLNISGIGLDSSGFEDLQQSITDELKLVEINISKNR 513

Query: 121 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 180
           GGIE A FL KL+  A +LVSVNA+YN MP  S  ++ SALK AKG LE+LD+RGN+WD 
Sbjct: 514 GGIETAKFLSKLILSAPELVSVNAAYNFMPAHSSFVVFSALKAAKGNLEVLDVRGNSWDH 573

Query: 181 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
             +  SL+ +FQ++ K ILI  SSP  D  YD DP
Sbjct: 574 DPSHKSLLDKFQDAQKPILILQSSPRKDEPYDDDP 608

[Close]

BLAST of CSPI07G13680 vs. NCBI nr
Match: gi|595800777|ref|XP_007201725.1| (hypothetical protein PRUPE_ppa003067mg [Prunus persica])

HSP 1 Score: 262.3 bits (669), Expect = 9.2e-67
Identity = 137/215 (63.72%), Postives = 165/215 (76.74%), Query Frame = 1


Query: 1   MSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGVTQLLNVLSTLRKPLRSL 60
           MSDNPIED GIR+LIPYF+EASE+  PFADL LENCELSC GVT L++ LSTL++PL+SL
Sbjct: 393 MSDNPIEDAGIRSLIPYFVEASEKCFPFADLMLENCELSCHGVTYLIDTLSTLQRPLKSL 452

Query: 61  SVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVEGVTAGSNIVNINMSKNR 120
           SVADN LGS VA ALG  +  SIQILNVEGIGLG  GFQ+L +G+T    +V +N+SKNR
Sbjct: 453 SVADNDLGSQVAAALGKLLSTSIQILNVEGIGLGSSGFQELQDGITKELKLVKVNISKNR 512

Query: 121 GGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKIAKGKLELLDLRGNNWDD 180
           GGIE A FL KL+S A +LV+V+A+YNLMP++SL  I SALK AKG +E LDLRGN WD 
Sbjct: 513 GGIETANFLSKLISMAPELVTVDAAYNLMPLKSLTTICSALKAAKGNIERLDLRGNIWDY 572

Query: 181 QKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 216
           Q    S+ A+ Q + + +LI SSSP  D  YD DP
Sbjct: 573 QPGYASMHADIQCNGRPVLILSSSPTPDAPYDDDP 607

The following BLAST results are available for this feature:

BLAST of CSPI07G13680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NALP5_BOVIN	4.4e-08	34.43	NACHT, LRR and PYD domains-containing protein 5 OS=Bos taurus GN=NLRP5 PE=2 SV=1	[more]

BLAST of CSPI07G13680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4G5_CUCSA	4.1e-114	99.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G330390 PE=4 SV=1	[more]
M5VNW6_PRUPE	6.4e-67	63.72	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003067mg PE=4 SV=1	[more]
A0A067JRC0_JATCU	1.1e-63	61.40	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17590 PE=4 SV=1	[more]
A0A061DW66_THECC	2.5e-63	63.26	RNI-like superfamily protein, putative OS=Theobroma cacao GN=TCM_003751 PE=4 SV=...	[more]
V4T9D8_9ROSI	3.1e-61	59.53	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019392mg PE=4 SV=1	[more]

BLAST of CSPI07G13680 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20210.1	2.1e-45	49.31	RNI-like superfamily protein	[more]

BLAST of CSPI07G13680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443929\|ref\|XP_004139728.1\|	5.9e-114	99.53	PREDICTED: protein NLRC3 isoform X1 [Cucumis sativus]	[more]
gi\|700189322\|gb\|KGN44555.1\|	5.9e-114	99.53	hypothetical protein Csa_7G330390 [Cucumis sativus]	[more]
gi\|659124100\|ref\|XP_008461989.1\|	2.0e-109	96.28	PREDICTED: protein NLRC3 isoform X1 [Cucumis melo]	[more]
gi\|1009149624\|ref\|XP_015892577.1\|	3.8e-68	62.33	PREDICTED: uncharacterized protein LOC107426804 [Ziziphus jujuba]	[more]
gi\|595800777\|ref\|XP_007201725.1\|	9.2e-67	63.72	hypothetical protein PRUPE_ppa003067mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G13680.1	CSPI07G13680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24106	FAMILY NOT NAMED	coord: 1..203 score: 1.0
None	No IPR available	PANTHER	PTHR24106:SF146	RNI-LIKE SUPERFAMILY PROTEIN	coord: 1..203 score: 1.0
None	No IPR available	unknown	SSF52047	RNI-like	coord: 2..187 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G13680	Cla014995	Watermelon (97103) v1	cpiwmB586
CSPI07G13680	MELO3C024149	Melon (DHL92) v3.5.1	cpimeB544
CSPI07G13680	Lsi02G020420	Bottle gourd (USVL1VR-Ls)	cpilsiB517
CSPI07G13680	MELO3C024149.2	Melon (DHL92) v3.6.1	cpimedB529
CSPI07G13680	Cucsa.078730	Cucumber (Gy14) v1	cgycpiB079

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G13680	Watermelon (97103) v2	cpiwmbB597
CSPI07G13680	Wax gourd	cpiwgoB719
CSPI07G13680	Cucurbita maxima (Rimu)	cmacpiB936
CSPI07G13680	Cucurbita moschata (Rifu)	cmocpiB915
CSPI07G13680	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G13680	Watermelon (Charleston Gray)	cpiwcgB554
CSPI07G13680	Cucurbita pepo (Zucchini)	cpecpiB341
CSPI07G13680	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G13680	Silver-seed gourd	carcpiB0100
CSPI07G13680	Cucumber (Chinese Long) v3	cpicucB414