CSPI07G12510 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G12510
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 10826520 .. 10826669 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAAGCCCATCGAGGAGATTTTCGAAGAATTTGAAAGGAAGTTGGAAGATCTGAGCCCTTTAGAGGATGAAGTGGTGAAACCTTTAAAGAAGAAGAAAGTGACGGTGAATAAGAAGGTTTTGAAGGAACAATTCGTCAAAAGATAA

mRNA sequence

ATGACAAAGCCCATCGAGGAGATTTTCGAAGAATTTGAAAGGAAGTTGGAAGATCTGAGCCCTTTAGAGGATGAAGTGGTGAAACCTTTAAAGAAGAAGAAAGTGACGGTGAATAAGAAGGTTTTGAAGGAACAATTCGTCAAAAGATAA

Coding sequence (CDS)

ATGACAAAGCCCATCGAGGAGATTTTCGAAGAATTTGAAAGGAAGTTGGAAGATCTGAGCCCTTTAGAGGATGAAGTGGTGAAACCTTTAAAGAAGAAGAAAGTGACGGTGAATAAGAAGGTTTTGAAGGAACAATTCGTCAAAAGATAA
Homology
[Close]
BLAST of CSPI07G12510 vs. TrEMBL
Match: A0A0A0K4R7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298750 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.4e-15
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1  MTKPIEEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR 50
          MT PIEEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR
Sbjct: 1  MTNPIEEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR 49

[Close]
BLAST of CSPI07G12510 vs. TrEMBL
Match: A0A0A0K7W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.8e-08
Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 1 

Query: 4  PIEEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR 50
          P EEI EEFERKLEDLSPLEDEVVKPL KKKVTV K VLK+QF KR
Sbjct: 43 PSEEICEEFERKLEDLSPLEDEVVKPL-KKKVTVKKSVLKKQFDKR 87

[Close]
BLAST of CSPI07G12510 vs. NCBI nr
Match: gi|700189225|gb|KGN44458.1| (hypothetical protein Csa_7G298750 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 2.0e-15
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1  MTKPIEEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR 50
          MT PIEEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR
Sbjct: 1  MTNPIEEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR 49

[Close]
BLAST of CSPI07G12510 vs. NCBI nr
Match: gi|700189199|gb|KGN44432.1| (hypothetical protein Csa_7G290550 [Cucumis sativus])

HSP 1 Score: 65.1 bits (157), Expect = 4.0e-08
Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 1 

Query: 4  PIEEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR 50
          P EEI EEFERKLEDLSPLEDEVVKPL KKKVTV K VLK+QF KR
Sbjct: 43 PSEEICEEFERKLEDLSPLEDEVVKPL-KKKVTVKKSVLKKQFDKR 87

The following BLAST results are available for this feature:
BLAST of CSPI07G12510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G12510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4R7_CUCSA1.4e-1597.96Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298750 PE=4 SV=1[more]
A0A0A0K7W9_CUCSA2.8e-0884.78Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1[more]
BLAST of CSPI07G12510 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G12510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189225|gb|KGN44458.1|2.0e-1597.96hypothetical protein Csa_7G298750 [Cucumis sativus][more]
gi|700189199|gb|KGN44432.1|4.0e-0884.78hypothetical protein Csa_7G290550 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G12510.1CSPI07G12510.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G12510CsaV3_7G024520Cucumber (Chinese Long) v3cpicucB414
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G12510Melon (DHL92) v3.6.1cpimedB514
CSPI07G12510Cucumber (Gy14) v2cgybcpiB331
CSPI07G12510Silver-seed gourdcarcpiB0307
CSPI07G12510Silver-seed gourdcarcpiB0684
CSPI07G12510Watermelon (97103) v2cpiwmbB597
CSPI07G12510Wax gourdcpiwgoB718
CSPI07G12510Cucumber (Gy14) v1cgycpiB079
CSPI07G12510Cucurbita maxima (Rimu)cmacpiB045
CSPI07G12510Cucurbita maxima (Rimu)cmacpiB493
CSPI07G12510Cucurbita moschata (Rifu)cmocpiB035
CSPI07G12510Cucurbita moschata (Rifu)cmocpiB484
CSPI07G12510Cucumber (Chinese Long) v2cpicuB354
CSPI07G12510Melon (DHL92) v3.5.1cpimeB528
CSPI07G12510Watermelon (Charleston Gray)cpiwcgB554
CSPI07G12510Watermelon (97103) v1cpiwmB586
CSPI07G12510Cucurbita pepo (Zucchini)cpecpiB593
CSPI07G12510Cucurbita pepo (Zucchini)cpecpiB801
CSPI07G12510Bottle gourd (USVL1VR-Ls)cpilsiB517