CSPI07G12100 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G12100
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Description40S ribosomal protein S4
LocationChr7 : 10351202 .. 10357475 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAAGGCACGTGCTCGACAATTACTTAAATACAAAATTCCTCTTCTCCTTTTCGTCTCTGAGAGAACCCTAGCATCTTCCACAAACGCCACGCCGCTGCTTCCTCCCCACAGCTGCCGACTCTAGTTTAGCTCCGAAATATGGTCAGTGATCTCATTTAGCTCTTTCTTCTCTTGTTTCATTTGTGCATTCTATTTTTCCTTCTATCCTTCTATCCTTCTGGAGTTTTAGACTTCCGTATCTGTTTTGGGTCTCTTGTTCGTCTTCAGGTGGATTACTTTTTTATGTGGTTACTTCTTCATTTTGTTAATTTTCTGAGACAATTTTCTGGGCACAACGATGCGAAAGTTTTCACCAATGGGTTCGTTCTATTTAAGTATAAATTGATTTATGTGTCCTTGTATGGGACTGTATTCTACATGCAAGATGAGTATTGCCATTGGCACGGTTTTGTCCACTGTTATTTATTTTTCCTCATGATGTGCGGATTTCTGTGTATATGCTTGTGTTTTGTTGTTCTAAATAGACACATTTTTCTTTGAAATAAATGCCTATGGCGATGACAGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAGCTTGGTGGTGCATTTGTGAGTCAAATTTGTTGTTTCATTTATTTTATTTTTTCTCTCGAGTTTATGCATTACGCTTATTTCTGACAGTTCTACCTCTCAAATCTCTTTGTAGGCCCCCAAACCTTCATCTGGACCTCACAAGTCGAGGGAATGCCTCCCTTTGATCCTTATATTGAGAAACCGACTCAAATATGCCCTCACGTACCGTGAGGTAATTGCAATATTAATGCAACGACATGTTTTGGTCGATGGGAAGGTTAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGGTACGTTATCTTGAACTTTGTAACCTTACCATTGTTTGAATTCCAATGTCTACTGACCCTTTTTTAGAGTGCCACTATAGGTGTTATTATAAGAGCATGCTAAATTGTTTTTTTTTTATTCTTGGAATTGACTGTTGATTTTATGAACTGAATTAGTGAAGTAATCACTCATCATTTTGAGATTGTTTTCCTTCGGTTATAGTGCCCCCTACGCTTTAGGCTTAGTGTTATACTTCATTGTTTTTTATGTTATTTATATTTAGTCTTTAGTATTAATTAATTTTAAGGCTTTAACAATCAATATTTTATTCATTTATTTATTTATTGCGTCTTGCTTCGCTCTGGTGACACCTCTTTGTTGCCTCTTGCCTAGAGGCAATGAAGTGACTTGTTGCCTTGAGGTGTGCCTTGTGGCTTGCGCTTTGAAAACACTGGTAACACTTTGAAAGGCCCAATTGCCTATCTTCAATTCATTGTAAGTGCCAGTAGGAAATCTAGCTTTGCGTAGATGAATTACAAGGTCCCCTTCTACAAAGTTAAGCACCCTCTGAGATTTTTCCTAAGCCAAGGGCCATTTTACTTAATTGATCTATCACAACCACCGCAACATCAAAACTTACTGTCTTTGGAACTCATCAAACAACTTCTGTACTTCTAGAGGAGGTTTACTATTGTCTCTTCTGCCTTTTCAACTATCACAAGGTCCAATATATCAACCTCCCTTTCGTTATCAAACATTTTTCCACTGATTGTGCTAAGCTAATGATTGTTGCGATCTTTCTTAGAACTAACTCTGTCATCATTTTTATTATTCAATGGGAGTAATACCACTTTCTCCCCATCCATTGAAATTCATAAGTATTCTCTCTTCTCTTGTGCAATGTTCGATTATGCAAGGTTCGAGTATTAAATTGCCAAGGTATTCCAAATAGAATGTGATGTACGTCCATATCTAACATATTGCAAACAATTCGGTCCATGTGTTTACTTCCAATTGAAAGAGTAACTAGGCAAATCTCATTTAGTTGAGCCTCTCCACCTTTTTTCACCCAACCAAAGAATTCTCTTCATCATCTCCATATGCTATTGTTTTTCTTTGTTTACATTCATTAGACAAATATCTTGTTTGGCTACAGTTAGAACACTTTCTCATTATGAGCCCGTTATTCAAATTTTGAGTTCTCTTATTCACTCGAATTTTGAAAGAATGGCCATATTTTGGTTGTTTTTTGCCTACGAAGTGTTCCAAGGATTTTTTCTTGCATTCTTCTTGGAGTGAACTTTGTTCAATTCGTCCATTCTTTTAGCACAAATAATTCCATCAACTAACAATTGAAAATGTCGTAGTTTTACCTTTTTTGATGTCCACCTACATGCCACCAATGAATCTTGCAATTAAGTGTTCCTCATTCTCCACCTAATTTGTTCTTGCTTCCAATCGGTGGAATTCTTCAATGTAATTAGCTATGGATCATAGGCCATGTCCACAATTTTAATATTGATTATAGTGTTTGTTCATAACTGGGTGGGTGTAACGCTCCTTCATCAAACACTTCATCTTTTTCCAAAAACGGATTGGTTTCTTGCCTCTACTATTGACCTCCTTAGTTTTAAGGCCACCGGTTGCCCCTTTTTATGCTCAAAGTTATTCATATATTATAATATGCAAAGAAATTATCGGTGTTCTTTATCCAAGAATACTTCAATATCACATTTCCCACTATGAAGTGGCAAATCTATCTTCATCTTGTAATCATAATGATCTTCTCTTGCCACATGTTGATTGTCTTGTCTTCTATAATTAACAAAGTCATTTTCTTGATCTTCCTCACTTGAAGAATCTCATTCTTGAAATTGTTGGTATCATTCTTGAAAATTTGGTCGAGGTTCTTGGCGTTCTTGGAACTGGAACTGTCTTTGGCGAAAATGACTACTTTTTTACCTCTTTCTTCAATGGTTTCTTGCTGATTTTGAACATGCCTCAGCTGCCCATGCCACACCTACCTTTCTTCCTCCATTCTTGAATTGGTTCTTTTGGCATTATTGGGGTGTTTGGCTCGTGGCTTTGGAATTAGGGGGTTTGGCATTTGAAGCCAAACCCATGTTTGTTCCCTTGGAATAAAATTCCTGGGATTAAGGGGTTTGGAATATGTTTTTTTTATAATTATTTAATGTCATATGTTTTAGAAAAAATTTCACTTCAACGTCTTATCAATGATCGTTGGCAACAATTGTTAGCCAACTTCATGATCAACCACGATGATCAACCACGATCGATCGACGGTCACAACAACCGATTGTTTTACTCGTTGGCTCCAGATTGTCATTGTAGATCGTCCTGATCGTTGATTATCAATGAACATCTTGATTGACGACAACCAATCGTTATCATTAATTATCGATCTCATGCCTATTAACAAACGATCTTACTGATGGTAAATGGTCAATAGCCATAACCCTTGACGATCGATTGCCATGATGGTCGATGACCAACCAATTGTCTTAAAATTGACAACTGTTGATCAATGACCGTCTTCACCAAGGCTTCCTACACTCTTTCTCATGGGATTGAATAGTAAACACTATTCAAGCCCATGGATTACTTTTTTTTCTAATTCAATCTAGAAAATCATCAACTACAAACACCACCCTAGTGACCATTGTCAGTCGACCACTAGGTGTCATTTCTGACAAACTCGGTTGACGAACTTTCGACCACCACTTTTCCAACTTTTGCAAACCATGAAAAATTAATAAAAATAAATTTTTGAAAAACTTTTTTTTTCTGAGTCATTCCATATATGTCTTTGATTTAATCACAATAATATTATATAAAATACTTATTTTTTCATTCTTCTATTTTCTTTTCTTATGGAGTTTTTTTATAACTATTATTATTAGATCATTTTTTTTAATGATCTCTTTTCTATTTTTTATTTAAAATTAATCTTTCCTTCATTTTAGAAGATTTTGTTTATTTTGTTATATTTTTTCATGAAAATTGATGACCTATCTATTGTGATCTCGAGTATAAATTAAATATTAGTATATTGATAATATAGTGAAAATTTTAAATAAATTAAATATTTTTAGTTTAATAACATTTTTCATTTTTTTCATTAGTCAATTTAACTAAAAGACTCCAGACTTACTTGAATTGACTTATTTTTATTTAGACCTCTTTTGATGAAGTATTTTTAGATACATTACATGTGTGTCATAAAAAGAAAACCATAACTATAGTTAAACATAACTCTATTTGATTTTCACTTTTGAATGATCCTTTTGGTTATGCTTATTTTATTATTTTGAAACATATTAGACCATTTTTAATGTTGCTTAACTAGAACTTTTGTAAACTCCATCTGATTACATAATTTGTTATATTTTGTGAATGGTTTGTAATATTCCTACTTAGATCATTCATGTTAATGCATGTGTAATCAAAATTATTGTTATCTAATTTTGAAATTTTTTGTTTTTACATTATTGTTATTAAAATCAATAGAGTCAATAAATTAAATTAGAGGTACAAAATATAAAAAAAATCAATTAAAAATTTGATACAAAATAAATTTAGGACGTAAAATTAATAAAAATAACTAAACAAATTAACTAAACCTAGGAATTCAAAATCAGCACCCCAAACACCATCATCAGAAAATTCAGATTTCCAAATACTGGCATTTATAATACCTAGGCATTAGAGTCCCATCAAATAAGTTCACAGGCATTTACTTTTCAGACATTTGATTTCGAACCTGCGTGTCAAACATCTGGATGATTCCCAGCAATTGGGTTTGCTACTTGCAAGCTTACACTTGTTCTGGGATAGAGGACAAGTGTTTTTTTTGCCTCTTGGTTTCACGTGCATAGATCCCCAGCAATTGGGTTTGCTACCCTTTTTCTGGTCATAGTCTGAGGGTTCTTGGAGCTCTATTACCAATTTGGTCTAAAACCAAGAGTACTTCTGAATGAATAATATTCTCCAGCTCTCAATGAGCGGAGATGGCCTTTATTTATCGGGGAAAAGTGGTTTCAGGTTTGTAATTAATGCTAACAATTCAAAATAACAGACCAACTTATTTTATCAACTATCTGACTCACTCACTCTTAGCTAGTTTACAAAAGCACCTCATGGTAGAGGAAGGCTATTACTAATGGCTGGGGGCTTTAGTGTTAATTCTACCATCATTTTGTTTTAGCATTTTCTTCCCGTTCTTCGTGGAAGATGCAATTCTGTTTATTGCTTTTGTATTTACATTTTTAAGCACAACACTAATATTTTTCTCTGCCTTCTCTTCAGACGTTGTGTCAATTCCCAAAACAAGTGAGAATTTCCGGCTTCTTTATGACACAAAAGGCCGATTTCGTTTACACTCAGTTAGGGATGAGGAGGCCAAGGTTAGCTACTGTCCTTTTGATGTTGAAATTTGACCTATTTGTTACAATCTTGTTGTATAAAGTATTCTAGTTTCAAAGTAAAATAGATGCAATTACAAAGTTTTTGGCATCAATTGTTCATGAATCATAAGGGAGAGATTTAGCTCTTTCTCCAGTTGGGGAGACATTCTACCTTTTCAAATTATTATCATGTGACGTTAGTGTAGGGAAGTATTTCAATATCTTATAACCCTCTGGAGTAGTAACAGGCTGGGCGCTGGACACCGTTTGTGGTTCATGATATAATTGGACGATTTAAGCTTGACTTTCATATTACTTTTTGCAGTATAAGCTGTGCAAAGTTCGCTCTGTACAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACCTACGATGGACGCACAATCCGTTATCCTGACCCTTTAATCAAGGCGAATGACACCATCAAGCTGGACCTCGAGTCCAACAAGATTGCAGATTTCATCAAGTTCGATGTAGGAAATGTTGTGATGGTTACCGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAATAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCTACTCGGCTGGGCAATGTGTTCACAGTTGGCAAGGGGACTAAGCCGTGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCGCAGTTACTGCTTGAGATTTAGTGTAGTGTAGTCATTGATGAAAGGTGGGATTTTGCTCTTGTTAGTTTTGTTTTTCTTGGTTTTTTTTTTGGTTAAGTAGATCTAAAAAAGGTTGATACTTTGTTATTTCTACTACAATTATGCAAGGCTACTGCTACTGCTACAATCTTTGTCATTCCAGAACTATTTGCTATAATGAACA

mRNA sequence

ATGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAGCTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCACAAGTCGAGGGAATGCCTCCCTTTGATCCTTATATTGAGAAACCGACTCAAATATGCCCTCACGTACCGTGAGGTAATTGCAATATTAATGCAACGACATGTTTTGGTCGATGGGAAGGTTAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGACGTTGTGTCAATTCCCAAAACAAGTGAGAATTTCCGGCTTCTTTATGACACAAAAGGCCGATTTCGTTTACACTCAGTTAGGGATGAGGAGGCCAAGTATAAGCTGTGCAAAGTTCGCTCTGTACAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACCTACGATGGACGCACAATCCGTTATCCTGACCCTTTAATCAAGGCGAATGACACCATCAAGCTGGACCTCGAGTCCAACAAGATTGCAGATTTCATCAAGTTCGATGTAGGAAATGTTGTGATGGTTACCGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAATAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCTACTCGGCTGGGCAATGTGTTCACAGTTGGCAAGGGGACTAAGCCGTGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCGCAGTTACTGCTTGA

Coding sequence (CDS)

ATGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAGCTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCACAAGTCGAGGGAATGCCTCCCTTTGATCCTTATATTGAGAAACCGACTCAAATATGCCCTCACGTACCGTGAGGTAATTGCAATATTAATGCAACGACATGTTTTGGTCGATGGGAAGGTTAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGACGTTGTGTCAATTCCCAAAACAAGTGAGAATTTCCGGCTTCTTTATGACACAAAAGGCCGATTTCGTTTACACTCAGTTAGGGATGAGGAGGCCAAGTATAAGCTGTGCAAAGTTCGCTCTGTACAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACCTACGATGGACGCACAATCCGTTATCCTGACCCTTTAATCAAGGCGAATGACACCATCAAGCTGGACCTCGAGTCCAACAAGATTGCAGATTTCATCAAGTTCGATGTAGGAAATGTTGTGATGGTTACCGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAATAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCTACTCGGCTGGGCAATGTGTTCACAGTTGGCAAGGGGACTAAGCCGTGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCGCAGTTACTGCTTGA
Homology
[Close]
BLAST of CSPI07G12100 vs. Swiss-Prot
Match: RS43_ARATH (40S ribosomal protein S4-3 OS=Arabidopsis thaliana GN=RPS4D PE=2 SV=2)

HSP 1 Score: 505.4 bits (1300), Expect = 3.9e-142
Identity = 241/261 (92.34%), Postives = 257/261 (98.47%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of CSPI07G12100 vs. Swiss-Prot
Match: RS42_ARATH (40S ribosomal protein S4-2 OS=Arabidopsis thaliana GN=RPS4B PE=2 SV=4)

HSP 1 Score: 505.0 bits (1299), Expect = 5.0e-142
Identity = 241/261 (92.34%), Postives = 256/261 (98.08%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of CSPI07G12100 vs. Swiss-Prot
Match: RS4_SOLTU (40S ribosomal protein S4 OS=Solanum tuberosum GN=RPS4 PE=2 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 8.6e-142
Identity = 242/264 (91.67%), Postives = 259/264 (98.11%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQR V+VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKL+IIE+ARKRLA+Q+A  A
Sbjct: 241 GKGIKLTIIEDARKRLAAQSATPA 264

[Close]
BLAST of CSPI07G12100 vs. Swiss-Prot
Match: RS41_ARATH (40S ribosomal protein S4-1 OS=Arabidopsis thaliana GN=RPS4A PE=2 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 2.5e-141
Identity = 239/261 (91.57%), Postives = 256/261 (98.08%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of CSPI07G12100 vs. Swiss-Prot
Match: RS4_GOSHI (40S ribosomal protein S4 OS=Gossypium hirsutum GN=RPS4 PE=2 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.1e-139
Identity = 241/261 (92.34%), Postives = 253/261 (96.93%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHV+VDGKVRTDKT+PAGFMDVVSIPKT+E+FRLLYDTKGRF LH++  +E K
Sbjct: 61  VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIH+QDA GHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
            KGIKLSIIEEARKRLA+Q A
Sbjct: 241 RKGIKLSIIEEARKRLAAQNA 261

[Close]
BLAST of CSPI07G12100 vs. TrEMBL
Match: A0A0A0K4K7_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 2.5e-148
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CSPI07G12100 vs. TrEMBL
Match: A0A0A0K3Y8_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G281390 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 1.1e-146
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQA VTA
Sbjct: 241 GKGIKLSIIEEARKRLASQATVTA 264

[Close]
BLAST of CSPI07G12100 vs. TrEMBL
Match: A0A0A0KQK7_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus GN=Csa_5G212590 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 6.9e-146
Identity = 257/264 (97.35%), Postives = 263/264 (99.62%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKTSENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQSAVTA 264

[Close]
BLAST of CSPI07G12100 vs. TrEMBL
Match: A0A067L9J7_JATCU (40S ribosomal protein S4 OS=Jatropha curcas GN=JCGZ_17463 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 3.2e-143
Identity = 253/264 (95.83%), Postives = 258/264 (97.73%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKR A+ A   A
Sbjct: 241 GKGIKLSIIEEARKRQAAAAQTVA 264

[Close]
BLAST of CSPI07G12100 vs. TrEMBL
Match: A0A0R4J581_SOYBN (40S ribosomal protein S4 OS=Glycine max GN=GLYMA_14G056900 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 4.2e-143
Identity = 247/264 (93.56%), Postives = 260/264 (98.48%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI+ANDT+KLDLE NKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIH+QDATGHEFATR+GNVFT+GKGTKPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKR+A+Q A TA
Sbjct: 241 GKGIKLSIIEEARKRIAAQQATTA 264

[Close]
BLAST of CSPI07G12100 vs. TAIR10
Match: AT5G58420.1 (AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 505.4 bits (1300), Expect = 2.2e-143
Identity = 241/261 (92.34%), Postives = 257/261 (98.47%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of CSPI07G12100 vs. TAIR10
Match: AT5G07090.1 (AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 505.0 bits (1299), Expect = 2.8e-143
Identity = 241/261 (92.34%), Postives = 256/261 (98.08%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of CSPI07G12100 vs. TAIR10
Match: AT2G17360.1 (AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 502.7 bits (1293), Expect = 1.4e-142
Identity = 239/261 (91.57%), Postives = 256/261 (98.08%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of CSPI07G12100 vs. NCBI nr
Match: gi|449465362|ref|XP_004150397.1| (PREDICTED: 40S ribosomal protein S4-3 [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 3.6e-148
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CSPI07G12100 vs. NCBI nr
Match: gi|659123052|ref|XP_008461463.1| (PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo])

HSP 1 Score: 531.2 bits (1367), Expect = 1.1e-147
Identity = 262/264 (99.24%), Postives = 264/264 (100.00%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVS+PK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSVPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CSPI07G12100 vs. NCBI nr
Match: gi|659123125|ref|XP_008461503.1| (PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo])

HSP 1 Score: 528.1 bits (1359), Expect = 8.9e-147
Identity = 259/264 (98.11%), Postives = 264/264 (100.00%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CSPI07G12100 vs. NCBI nr
Match: gi|778726350|ref|XP_004150395.2| (PREDICTED: 40S ribosomal protein S4-3-like [Cucumis sativus])

HSP 1 Score: 527.3 bits (1357), Expect = 1.5e-146
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQA VTA
Sbjct: 241 GKGIKLSIIEEARKRLASQATVTA 264

[Close]
BLAST of CSPI07G12100 vs. NCBI nr
Match: gi|659109681|ref|XP_008454823.1| (PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo])

HSP 1 Score: 525.8 bits (1353), Expect = 4.4e-146
Identity = 258/264 (97.73%), Postives = 263/264 (99.62%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKTSENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKL+IIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQAAVTA 264

The following BLAST results are available for this feature:
BLAST of CSPI07G12100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS43_ARATH3.9e-14292.3440S ribosomal protein S4-3 OS=Arabidopsis thaliana GN=RPS4D PE=2 SV=2[more]
RS42_ARATH5.0e-14292.3440S ribosomal protein S4-2 OS=Arabidopsis thaliana GN=RPS4B PE=2 SV=4[more]
RS4_SOLTU8.6e-14291.6740S ribosomal protein S4 OS=Solanum tuberosum GN=RPS4 PE=2 SV=1[more]
RS41_ARATH2.5e-14191.5740S ribosomal protein S4-1 OS=Arabidopsis thaliana GN=RPS4A PE=2 SV=1[more]
RS4_GOSHI1.1e-13992.3440S ribosomal protein S4 OS=Gossypium hirsutum GN=RPS4 PE=2 SV=1[more]
BLAST of CSPI07G12100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4K7_CUCSA2.5e-148100.0040S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G282410 PE=3 SV=1[more]
A0A0A0K3Y8_CUCSA1.1e-14698.4840S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G281390 PE=3 SV=1[more]
A0A0A0KQK7_CUCSA6.9e-14697.3540S ribosomal protein S4 OS=Cucumis sativus GN=Csa_5G212590 PE=3 SV=1[more]
A0A067L9J7_JATCU3.2e-14395.8340S ribosomal protein S4 OS=Jatropha curcas GN=JCGZ_17463 PE=3 SV=1[more]
A0A0R4J581_SOYBN4.2e-14393.5640S ribosomal protein S4 OS=Glycine max GN=GLYMA_14G056900 PE=3 SV=1[more]
BLAST of CSPI07G12100 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58420.12.2e-14392.34 Ribosomal protein S4 (RPS4A) family protein[more]
AT5G07090.12.8e-14392.34 Ribosomal protein S4 (RPS4A) family protein[more]
AT2G17360.11.4e-14291.57 Ribosomal protein S4 (RPS4A) family protein[more]
BLAST of CSPI07G12100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449465362|ref|XP_004150397.1|3.6e-148100.00PREDICTED: 40S ribosomal protein S4-3 [Cucumis sativus][more]
gi|659123052|ref|XP_008461463.1|1.1e-14799.24PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo][more]
gi|659123125|ref|XP_008461503.1|8.9e-14798.11PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo][more]
gi|778726350|ref|XP_004150395.2|1.5e-14698.48PREDICTED: 40S ribosomal protein S4-3-like [Cucumis sativus][more]
gi|659109681|ref|XP_008454823.1|4.4e-14697.73PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000876Ribosomal_S4e
IPR002942S4_RNA-bd
IPR005824KOW
IPR013843Ribosomal_S4e_N
IPR013845Ribosomal_S4e_central_region
IPR018199Ribosomal_S4e_N_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G12100.1CSPI07G12100.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000876Ribosomal protein S4eHAMAPMF_00485Ribosomal_S4ecoord: 7..238
score: 36
IPR000876Ribosomal protein S4ePIRPIRSF002116RPS4a_RPS4ecoord: 1..241
score: 2.1
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 2..264
score: 4.0E
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 47..90
score: 7.
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 42..106
score: 2.
IPR002942RNA-binding S4 domainPROFILEPS50889S4coord: 42..104
score: 8
IPR005824KOWPFAMPF00467KOWcoord: 177..210
score: 1.
IPR005824KOWSMARTSM00739kow_9coord: 174..201
score: 7.
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 3..39
score: 1.3
IPR013845Ribosomal protein S4e, central regionPRODOMPD002667coord: 87..176
score: 5.0
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 95..169
score: 7.3
IPR018199Ribosomal protein S4e, N-terminal, conserved sitePROSITEPS00528RIBOSOMAL_S4Ecoord: 8..22
scor
NoneNo IPR availablePANTHERPTHR11581:SF11SUBFAMILY NOT NAMEDcoord: 2..264
score: 4.0E