CSPI07G12020 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G12020
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 10260547 .. 10261214 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTAGAATTTGCATGAGGATCTCTCGACTCTCGCTCGGTATCAAAATCTTCTTTGGGAACTCTCGACTCTCAACTGAAGCCCTAATACAATCACTCGTAGAAAATAGGAGAGCCAAGTCATTTTGAGCTAGAATGCATCAGGTTCCTTCGGTATCAAAACCTTAGTGGGGAACTCTCGATATTCAACATAAGCCACAATACAATTGCCCGTAGAAAGTAGGAGACCCAAGCCGCTTCGAGCTAGAATGTGTCAGGTTCCTTCGGTATAAGAAACTGCGTGGTAACTCTCGACTCTTGGCTGAAGCCATATTACAATTACCCGTAGAAAGAAAGAGAGCCAAGCCGTTTCAGGCCAGAATGCGTTGGGTTCTTTCGATATTAGAACTACGTGAAGAACTTCGACTCTTGACCGAAGCTACATTACTATCGCTCGTAGAAATTAGGAGAGCCAGGCCGCTTTAGGCCATAGTGCATTGGGTTTCTTTGATATTGGAAAATGCGTGGGGAACTCTCGACTTTTGGCTGAAGCCACATTACAATTGCACGTAGAAAGTAGGAGAGACGAGCCGTTTCGGGCCAGAATGAGTCAAGTTCATTTCGTGTCAGAATCTACTTTAAGAACTCTCGACTCTCAACTGAAGCCACAATACAATCACTCGTAG

mRNA sequence

ATGGATATTAGAATTTGCATGAGGATCTCTCGACTCTCGCTCGGTATCAAAATCTTCTTTGGGAACTCTCGACTCTCAACTGAAGCCCTAATACAATCACTCAAAGTAGGAGACCCAAGCCGCTTCGAGCTAGAATGTGTCAGGTTCCTTCGGTATAAGAAACTGCGTGGTAACTCTCGACTCTTGGCTGAAGCCATATTACAATTACCCGTAGAAAGAAAGAGAGCCAAGCCGTTTCAGGCCAGAATGCGTTGGGAGAGCCAGGCCGCTTTAGGCCATAGTGCATTGGGTTTCTTTGATATTGGAAAATGCGTGGGGAACTCTCGACTTTTGGCTGAAGCCACATTACAATTGCACGTAGAAAGTAGGAGAGACGAGCCGTTTCGGGCCAGAATGAGTCAAGTTCATTTCGTGTCAGAATCTACTTTAAGAACTCTCGACTCTCAACTGAAGCCACAATACAATCACTCGTAG

Coding sequence (CDS)

ATGGATATTAGAATTTGCATGAGGATCTCTCGACTCTCGCTCGGTATCAAAATCTTCTTTGGGAACTCTCGACTCTCAACTGAAGCCCTAATACAATCACTCAAAGTAGGAGACCCAAGCCGCTTCGAGCTAGAATGTGTCAGGTTCCTTCGGTATAAGAAACTGCGTGGTAACTCTCGACTCTTGGCTGAAGCCATATTACAATTACCCGTAGAAAGAAAGAGAGCCAAGCCGTTTCAGGCCAGAATGCGTTGGGAGAGCCAGGCCGCTTTAGGCCATAGTGCATTGGGTTTCTTTGATATTGGAAAATGCGTGGGGAACTCTCGACTTTTGGCTGAAGCCACATTACAATTGCACGTAGAAAGTAGGAGAGACGAGCCGTTTCGGGCCAGAATGAGTCAAGTTCATTTCGTGTCAGAATCTACTTTAAGAACTCTCGACTCTCAACTGAAGCCACAATACAATCACTCGTAG
Homology
[Close]
BLAST of CSPI07G12020 vs. TrEMBL
Match: A0A0A0K4I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279800 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.0e-81
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1 

Query: 1   MDIRICMRISRLSLGIKIFFGNSRLSTEALIQSLKVGDPSRFELECVRFLRYKKLRGNSR 60
           MDIRICMRISRLSLGIKIFFGNSRLSTEALIQSLKVGDPSRFELECVRFLRYKKLRGNSR
Sbjct: 1   MDIRICMRISRLSLGIKIFFGNSRLSTEALIQSLKVGDPSRFELECVRFLRYKKLRGNSR 60

Query: 61  LLAEAILQLPVERKRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAEATLQLHV 120
           LLAEAILQLPVERKRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAEATLQLHV
Sbjct: 61  LLAEAILQLPVERKRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAEATLQLHV 120

Query: 121 ESRRDEPFRARMSQVHFVSESTLRTLDSQLKPQYNHS 158
           ESRRDEPFRARMSQVHFVSESTLRTLDSQLKPQYNHS
Sbjct: 121 ESRRDEPFRARMSQVHFVSESTLRTLDSQLKPQYNHS 157

[Close]
BLAST of CSPI07G12020 vs. TrEMBL
Match: A0A0A0K4H8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279750 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-10
Identity = 48/101 (47.52%), Postives = 57/101 (56.44%), Query Frame = 1 

Query: 57  GNSRLLAEAILQLPVERKRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAEATL 116
           G S +     LQ PVE    K  QARMR      +  +A   FDI K V N+RLL EATL
Sbjct: 19  GRSHITIAPTLQSPVESSIIKTLQARMR-----QVPSNASSSFDIRKYVENTRLLVEATL 78

Query: 117 QLHVESRRDEPFRARMSQVHFVSESTLRTLDSQLKPQYNHS 158
           Q  VE RR +P RARM +V  + +    TLDS+LK QYN S
Sbjct: 79  QSPVERRRAKPIRARMHRVPSILKLVWSTLDSRLKLQYNCS 114

[Close]
BLAST of CSPI07G12020 vs. NCBI nr
Match: gi|700189165|gb|KGN44398.1| (hypothetical protein Csa_7G279800 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 8.6e-81
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1 

Query: 1   MDIRICMRISRLSLGIKIFFGNSRLSTEALIQSLKVGDPSRFELECVRFLRYKKLRGNSR 60
           MDIRICMRISRLSLGIKIFFGNSRLSTEALIQSLKVGDPSRFELECVRFLRYKKLRGNSR
Sbjct: 1   MDIRICMRISRLSLGIKIFFGNSRLSTEALIQSLKVGDPSRFELECVRFLRYKKLRGNSR 60

Query: 61  LLAEAILQLPVERKRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAEATLQLHV 120
           LLAEAILQLPVERKRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAEATLQLHV
Sbjct: 61  LLAEAILQLPVERKRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAEATLQLHV 120

Query: 121 ESRRDEPFRARMSQVHFVSESTLRTLDSQLKPQYNHS 158
           ESRRDEPFRARMSQVHFVSESTLRTLDSQLKPQYNHS
Sbjct: 121 ESRRDEPFRARMSQVHFVSESTLRTLDSQLKPQYNHS 157

[Close]
BLAST of CSPI07G12020 vs. NCBI nr
Match: gi|700189160|gb|KGN44393.1| (hypothetical protein Csa_7G279750 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 6.1e-10
Identity = 48/101 (47.52%), Postives = 57/101 (56.44%), Query Frame = 1 

Query: 57  GNSRLLAEAILQLPVERKRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAEATL 116
           G S +     LQ PVE    K  QARMR      +  +A   FDI K V N+RLL EATL
Sbjct: 19  GRSHITIAPTLQSPVESSIIKTLQARMR-----QVPSNASSSFDIRKYVENTRLLVEATL 78

Query: 117 QLHVESRRDEPFRARMSQVHFVSESTLRTLDSQLKPQYNHS 158
           Q  VE RR +P RARM +V  + +    TLDS+LK QYN S
Sbjct: 79  QSPVERRRAKPIRARMHRVPSILKLVWSTLDSRLKLQYNCS 114

The following BLAST results are available for this feature:
BLAST of CSPI07G12020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G12020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4I4_CUCSA6.0e-81100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279800 PE=4 SV=1[more]
A0A0A0K4H8_CUCSA4.3e-1047.52Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279750 PE=4 SV=1[more]
BLAST of CSPI07G12020 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G12020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189165|gb|KGN44398.1|8.6e-81100.00hypothetical protein Csa_7G279800 [Cucumis sativus][more]
gi|700189160|gb|KGN44393.1|6.1e-1047.52hypothetical protein Csa_7G279750 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G12020.1CSPI07G12020.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G12020Cucumber (Chinese Long) v3cpicucB414
CSPI07G12020Wax gourdcpiwgoB718
CSPI07G12020Cucumber (Gy14) v1cgycpiB364
CSPI07G12020Cucurbita maxima (Rimu)cmacpiB039
CSPI07G12020Cucurbita moschata (Rifu)cmocpiB029
CSPI07G12020Cucumber (Chinese Long) v2cpicuB354
CSPI07G12020Melon (DHL92) v3.5.1cpimeB548
CSPI07G12020Watermelon (97103) v1cpiwmB582
CSPI07G12020Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G12020Bottle gourd (USVL1VR-Ls)cpilsiB528
CSPI07G12020Melon (DHL92) v3.6.1cpimedB534
CSPI07G12020Cucumber (Gy14) v2cgybcpiB331