CSPI07G11080 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G11080
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 9235648 .. 9236115 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGTTCTCACGGAAAATACTTCCAATTTTCCTGCCACTTGTCGATTTGTTGCTGATGGCCGTTTAAACGCTTCCTTGGCCCGTTGGTCTGCTAAAATTGCACGTAATCGTGCTTCTGTTGCTCGTGATCGTGCTTCTACTGCCCTCTGCATCGACAAGGCCAATGCTGCTCGTGCTGCTGCTGACGCTGCTGATGCTGCTGCTGTTGTCGCTGATGACGCTGCAGATGCTGTTGATACTGCGACTGATTGCATTGCCGCTGGCATTGTTGCTTTTAGTCACACTAAAGCTGTCGATGATTATGAAGCTGCCAACACTTTATATATGAACCACCCAGACTATTATGCTGCTCTAATGACCGCTATTAAGGATGCCGGTGCTGCCAGTGGTGCAGCCAGATCTGCTGCCGAAGAGGCTGATGCTGCCAAGTATGCCCTTATTGACACCGGCAAAAGGACCCTAAAAAGG

mRNA sequence

CAGGTTCTCACGGAAAATACTTCCAATTTTCCTGCCACTTGTCGATTTGTTGCTGATGGCCGTTTAAACGCTTCCTTGGCCCGTTGGTCTGCTAAAATTGCACGTAATCGTGCTTCTGTTGCTCGTGATCGTGCTTCTACTGCCCTCTGCATCGACAAGGCCAATGCTGCTCGTGCTGCTGCTGACGCTGCTGATGCTGCTGCTGTTGTCGCTGATGACGCTGCAGATGCTGTTGATACTGCGACTGATTGCATTGCCGCTGGCATTGTTGCTTTTAGTCACACTAAAGCTGTCGATGATTATGAAGCTGCCAACACTTTATATATGAACCACCCAGACTATTATGCTGCTCTAATGACCGCTATTAAGGATGCCGGTGCTGCCAGTGGTGCAGCCAGATCTGCTGCCGAAGAGGCTGATGCTGCCAAGTATGCCCTTATTGACACCGGCAAAAGGACCCTAAAAAGG

Coding sequence (CDS)

CAGGTTCTCACGGAAAATACTTCCAATTTTCCTGCCACTTGTCGATTTGTTGCTGATGGCCGTTTAAACGCTTCCTTGGCCCGTTGGTCTGCTAAAATTGCACGTAATCGTGCTTCTGTTGCTCGTGATCGTGCTTCTACTGCCCTCTGCATCGACAAGGCCAATGCTGCTCGTGCTGCTGCTGACGCTGCTGATGCTGCTGCTGTTGTCGCTGATGACGCTGCAGATGCTGTTGATACTGCGACTGATTGCATTGCCGCTGGCATTGTTGCTTTTAGTCACACTAAAGCTGTCGATGATTATGAAGCTGCCAACACTTTATATATGAACCACCCAGACTATTATGCTGCTCTAATGACCGCTATTAAGGATGCCGGTGCTGCCAGTGGTGCAGCCAGATCTGCTGCCGAAGAGGCTGATGCTGCCAAGTATGCCCTTATTGACACCGGCAAAAGGACCCTAAAAAGG
Homology
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BLAST of CSPI07G11080 vs. NCBI nr
Match: gi|778730273|ref|XP_011659745.1| (PREDICTED: uncharacterized protein LOC105436255 [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 1.6e-71
Identity = 154/156 (98.72%), Postives = 156/156 (100.00%), Query Frame = 1 

Query: 1   QVLTENTSNFPATCRFVADGRLNASLARWSAKIARNRASVARDRASTALCIDKANAARAA 60
           +VLTENTSNFPATCRFVADGR+NASLARWSAKIARNRASVARDRASTALCIDKANAARAA
Sbjct: 101 KVLTENTSNFPATCRFVADGRINASLARWSAKIARNRASVARDRASTALCIDKANAARAA 160

Query: 61  ADAADAAAVVADDAADAVDTATDCIAAGIVAFSHTKAVDDYEAANTLYMNHPDYYAALMT 120
           ADAADAAAVVADDAADAVDTATDCIAAGIVAFSHTKAVDDYEAANTLYMNHPDYYAALMT
Sbjct: 161 ADAADAAAVVADDAADAVDTATDCIAAGIVAFSHTKAVDDYEAANTLYMNHPDYYAALMT 220

Query: 121 AIKDAGAASGAARSAAEEADAAKYALIDTGKRTLKR 157
           AIKDAGAASGAARSAAEEADAAKYALIDTGKRTLKR
Sbjct: 221 AIKDAGAASGAARSAAEEADAAKYALIDTGKRTLKR 256

The following BLAST results are available for this feature:
BLAST of CSPI07G11080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G11080 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI07G11080 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G11080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730273|ref|XP_011659745.1|1.6e-7198.72PREDICTED: uncharacterized protein LOC105436255 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G11080.1CSPI07G11080.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G11080CsaV3_7G023080Cucumber (Chinese Long) v3cpicucB414
CSPI07G11080CsGy7G010440Cucumber (Gy14) v2cgybcpiB331
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G11080Melon (DHL92) v3.6.1cpimedB526
CSPI07G11080Silver-seed gourdcarcpiB0570
CSPI07G11080Cucumber (Chinese Long) v3cpicucB410
CSPI07G11080Watermelon (97103) v2cpiwmbB548
CSPI07G11080Watermelon (97103) v2cpiwmbB585
CSPI07G11080Wax gourdcpiwgoB682
CSPI07G11080Wild cucumber (PI 183967)cpicpiB190
CSPI07G11080Cucumber (Gy14) v1cgycpiB158
CSPI07G11080Cucurbita maxima (Rimu)cmacpiB535
CSPI07G11080Cucurbita maxima (Rimu)cmacpiB577
CSPI07G11080Cucurbita moschata (Rifu)cmocpiB526
CSPI07G11080Cucumber (Chinese Long) v2cpicuB354
CSPI07G11080Melon (DHL92) v3.5.1cpimeB541
CSPI07G11080Watermelon (Charleston Gray)cpiwcgB542
CSPI07G11080Watermelon (97103) v1cpiwmB570
CSPI07G11080Cucurbita pepo (Zucchini)cpecpiB260
CSPI07G11080Bottle gourd (USVL1VR-Ls)cpilsiB511