CSPI07G10780 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G10780
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 8895496 .. 8895723 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAACACACACGCGTTGGCAAAGGTCAAAGAAGACGTCAGCCCAACCATTGTCGACGCAAGTAGTTTGAGATGTCGACAACAACATCGAAAAAAATGCAATGAGAAAACATTTGTCGACGTTGAGTATGGCCCACATCGACGAATGGTTATTGTTGACGCAAGCTTATCGATGCGAGAAGGATGTCGGTGCAAATCTAATGCCGACGTGAGTGTGGCACGTTAG

mRNA sequence

ATGGCCAACACACACGCGTTGGCAAAGGTCAAAGAAGACGTCAGCCCAACCATTGTCGACGCAAGTAGTTTGAGATGTCGACAACAACATCGAAAAAAATGCAATGAGAAAACATTTGTCGACGTTGAGTATGGCCCACATCGACGAATGGTTATTGTTGACGCAAGCTTATCGATGCGAGAAGGATGTCGGTGCAAATCTAATGCCGACGTGAGTGTGGCACGTTAG

Coding sequence (CDS)

ATGGCCAACACACACGCGTTGGCAAAGGTCAAAGAAGACGTCAGCCCAACCATTGTCGACGCAAGTAGTTTGAGATGTCGACAACAACATCGAAAAAAATGCAATGAGAAAACATTTGTCGACGTTGAGTATGGCCCACATCGACGAATGGTTATTGTTGACGCAAGCTTATCGATGCGAGAAGGATGTCGGTGCAAATCTAATGCCGACGTGAGTGTGGCACGTTAG
Homology
[Close]
BLAST of CSPI07G10780 vs. TrEMBL
Match: A0A0A0K8Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237860 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.5e-33
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 1 

Query: 1   MANTHALAKVKEDVSPTIVDASSLRCRQQHRKKCNEKTFVDVEYGPHRRMVIVDASLSMR 60
           MANTH+LAKVKEDVSPTIVDA SLRCRQQHRKKCNEKTFVDVEYG HRRMVIVDASLSMR
Sbjct: 29  MANTHSLAKVKEDVSPTIVDACSLRCRQQHRKKCNEKTFVDVEYGSHRRMVIVDASLSMR 88

Query: 61  EGCRCKSNADVSVAR 76
           EGC+CKSNADVSVAR
Sbjct: 89  EGCQCKSNADVSVAR 103

[Close]
BLAST of CSPI07G10780 vs. NCBI nr
Match: gi|700189038|gb|KGN44271.1| (hypothetical protein Csa_7G237860 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 1 

Query: 1   MANTHALAKVKEDVSPTIVDASSLRCRQQHRKKCNEKTFVDVEYGPHRRMVIVDASLSMR 60
           MANTH+LAKVKEDVSPTIVDA SLRCRQQHRKKCNEKTFVDVEYG HRRMVIVDASLSMR
Sbjct: 29  MANTHSLAKVKEDVSPTIVDACSLRCRQQHRKKCNEKTFVDVEYGSHRRMVIVDASLSMR 88

Query: 61  EGCRCKSNADVSVAR 76
           EGC+CKSNADVSVAR
Sbjct: 89  EGCQCKSNADVSVAR 103

The following BLAST results are available for this feature:
BLAST of CSPI07G10780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G10780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8Z7_CUCSA8.5e-3394.67Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237860 PE=4 SV=1[more]
BLAST of CSPI07G10780 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G10780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189038|gb|KGN44271.1|1.2e-3294.67hypothetical protein Csa_7G237860 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G10780.1CSPI07G10780.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G10780Csa7G237860Cucumber (Chinese Long) v2cpicuB354
CSPI07G10780CsaV3_7G022760Cucumber (Chinese Long) v3cpicucB414
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G10780Cucumber (Chinese Long) v2cpicuB352
CSPI07G10780Melon (DHL92) v3.5.1cpimeB523
CSPI07G10780Melon (DHL92) v3.5.1cpimeB541
CSPI07G10780Watermelon (Charleston Gray)cpiwcgB542
CSPI07G10780Watermelon (Charleston Gray)cpiwcgB570
CSPI07G10780Watermelon (97103) v1cpiwmB570
CSPI07G10780Watermelon (97103) v1cpiwmB618
CSPI07G10780Cucurbita pepo (Zucchini)cpecpiB260
CSPI07G10780Cucurbita pepo (Zucchini)cpecpiB303
CSPI07G10780Cucurbita pepo (Zucchini)cpecpiB693
CSPI07G10780Bottle gourd (USVL1VR-Ls)cpilsiB504
CSPI07G10780Bottle gourd (USVL1VR-Ls)cpilsiB511
CSPI07G10780Melon (DHL92) v3.6.1cpimedB502
CSPI07G10780Melon (DHL92) v3.6.1cpimedB526
CSPI07G10780Cucumber (Gy14) v2cgybcpiB296
CSPI07G10780Cucumber (Gy14) v2cgybcpiB331
CSPI07G10780Silver-seed gourdcarcpiB0379
CSPI07G10780Silver-seed gourdcarcpiB0428
CSPI07G10780Silver-seed gourdcarcpiB0570
CSPI07G10780Cucumber (Chinese Long) v3cpicucB410
CSPI07G10780Watermelon (97103) v2cpiwmbB548
CSPI07G10780Watermelon (97103) v2cpiwmbB585
CSPI07G10780Wax gourdcpiwgoB682
CSPI07G10780Wax gourdcpiwgoB695
CSPI07G10780Wild cucumber (PI 183967)cpicpiB190
CSPI07G10780Cucumber (Gy14) v1cgycpiB158
CSPI07G10780Cucumber (Gy14) v1cgycpiB357
CSPI07G10780Cucurbita maxima (Rimu)cmacpiB146
CSPI07G10780Cucurbita maxima (Rimu)cmacpiB535
CSPI07G10780Cucurbita maxima (Rimu)cmacpiB577
CSPI07G10780Cucurbita moschata (Rifu)cmocpiB132
CSPI07G10780Cucurbita moschata (Rifu)cmocpiB526
CSPI07G10780Cucurbita moschata (Rifu)cmocpiB566