CSPI07G10330 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G10330
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 8433230 .. 8434307 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTGCAGCGGCGGAAGGTCTTGCGGTACAGATCTGGACTGCGGCCGCAAGGTGACGCGTACGACTGCCTCGCGAACTGGCCGATGGTTGCAGCGACGTCCGGCTGGGCTTGGACGGAACGGAGAGGCGAAGAGAAGATGGAGATGGCCGGCGGCGGTTGCTGTGCGAACGGATGGGGCGGTTGGGCTGCGGCGGGAAGAAAACGGAAGGGAAAAGATCGGTGGGAGTCGTGGCGCACGGCGGAAGAAGAAAATAGGGGCGGCGGTTGCTGGGAAGAAAACGGAGGAGAAAGGATCGGCGGCTGGGCTGCGGCTGCGCACGAACGGAAGGAGAAGAGGAATGGAGGTCGGCCGGTGGCGGTTGCTGCGCTGCGAACGGGGAGAGGGGAAGGGCGCACGGCGCACGGGAGGAGAAGAGAAGAGAAAAGAAAACGGATTGTATTAGCACAATTGGTGTCACATCCTCTTCTAGACCACCTACTTTTAGCTTGAGAGACAGACGTGAAAGCAACAAATTAACATCCTCCTCCTTTAACTATAACTATATCTGCTAACCTAAATTACCTTTAAAATTTAGCAAGAACTATACTATACATATACAAATAAACACAGTAACTAGAATAATAATGATTCTAAAGACTTGTTAAGCTAGTTTATCAAGAAAAAAATAGATTATTTTTTTAATAAAAGGGGAGTTAAAAGATCTTTTAGTTCCCAAAGTTCTTTTGAGATAATTAAAGATAAAAAAGTAAAAAGATATTTATTTAAAGAAAGGATAAAAGATTTCCCTAATATCTCGAAATCTTGTATCCTTAAGGTACAAGAAAATCTTCACTTCGTTCTTTAAATAGATCAAGTCTTGTGTTCGATGATTCATTCGGTGCATCTACAACTCATGAAAGAAATTCTCTTGTGCATTGTCTCTGTACGAAGGTATTCAGATTACCGGTAAAGAGAAAAGAGAAGGAAAGGAGAAGGAGACGGTGGAGTCGTCGCGGCGTACCGGAGGAAGGAGAAGAGGCGCGGCGGTTGCGGCTGGGGAGAAGGGGAAGGACGCACGGGGAGGAAGAAGGAAATAG

mRNA sequence

ATGGTTGCAGCGACGTCCGGCTGGGCTTGGACGGAACGGAGAGGCGAAGAGAAGATGGAGATGGCCGGCGGCGGTTGCTGTGCGAACGGATGGGGCGGTTGGGCTGCGGCGGGAAGAAAACGGAAGGGAAAAGATCGGTGGGAGTCGTGGCGCACGGCGGAAGAAGAAAATAGGGGCGGCGGTTGCTGGGAAGAAAACGGAGGAGAAAGGATCGGCGGCTGGGCTGCGGCTGCGCACGAACGGAAGGAGAAGAGGAATGGAGGTCGGCCGGTGGCGGTTGCTGCGCTGCGAACGGGGAGAGGGGAAGGGCGCACGGCGCACGGGAGGAGAAGAGAAGAGAAAAGAAAACGGATTAAATTCTCTTGTGCATTGTCTCTGTACGAAGGTATTCAGATTACCGGTAAAGAGAAAAGAGAAGGAAAGGAGAAGGAGACGGTGGAGTCGTCGCGGCGTACCGGAGGAAGGAGAAGAGGCGCGGCGGTTGCGGCTGGGGAGAAGGGGAAGGACGCACGGGGAGGAAGAAGGAAATAG

Coding sequence (CDS)

ATGGTTGCAGCGACGTCCGGCTGGGCTTGGACGGAACGGAGAGGCGAAGAGAAGATGGAGATGGCCGGCGGCGGTTGCTGTGCGAACGGATGGGGCGGTTGGGCTGCGGCGGGAAGAAAACGGAAGGGAAAAGATCGGTGGGAGTCGTGGCGCACGGCGGAAGAAGAAAATAGGGGCGGCGGTTGCTGGGAAGAAAACGGAGGAGAAAGGATCGGCGGCTGGGCTGCGGCTGCGCACGAACGGAAGGAGAAGAGGAATGGAGGTCGGCCGGTGGCGGTTGCTGCGCTGCGAACGGGGAGAGGGGAAGGGCGCACGGCGCACGGGAGGAGAAGAGAAGAGAAAAGAAAACGGATTAAATTCTCTTGTGCATTGTCTCTGTACGAAGGTATTCAGATTACCGGTAAAGAGAAAAGAGAAGGAAAGGAGAAGGAGACGGTGGAGTCGTCGCGGCGTACCGGAGGAAGGAGAAGAGGCGCGGCGGTTGCGGCTGGGGAGAAGGGGAAGGACGCACGGGGAGGAAGAAGGAAATAG
Homology
[Close]
BLAST of CSPI07G10330 vs. TrEMBL
Match: A0A0A0KE93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G051530 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-09
Identity = 47/71 (66.20%), Postives = 51/71 (71.83%), Query Frame = 1 

Query: 106 AHGRRREEKRKRIKFSCALSLYEGIQITGKEKREGKEKETVESSRRTGGRRRGAAVAAGE 165
           A G RR+E+RK                 GKEKREGKEKETVESS+RT GRRRGAAVAAGE
Sbjct: 20  AAGLRRKERRKGTA-------------EGKEKREGKEKETVESSQRTRGRRRGAAVAAGE 77

Query: 166 KGKDARGGRRK 177
           KGK+ARGGRRK
Sbjct: 80  KGKEARGGRRK 77

[Close]
BLAST of CSPI07G10330 vs. NCBI nr
Match: gi|700190872|gb|KGN46076.1| (hypothetical protein Csa_6G051530 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 3.4e-09
Identity = 47/71 (66.20%), Postives = 51/71 (71.83%), Query Frame = 1 

Query: 106 AHGRRREEKRKRIKFSCALSLYEGIQITGKEKREGKEKETVESSRRTGGRRRGAAVAAGE 165
           A G RR+E+RK                 GKEKREGKEKETVESS+RT GRRRGAAVAAGE
Sbjct: 20  AAGLRRKERRKGTA-------------EGKEKREGKEKETVESSQRTRGRRRGAAVAAGE 77

Query: 166 KGKDARGGRRK 177
           KGK+ARGGRRK
Sbjct: 80  KGKEARGGRRK 77

The following BLAST results are available for this feature:
BLAST of CSPI07G10330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G10330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE93_CUCSA2.4e-0966.20Uncharacterized protein OS=Cucumis sativus GN=Csa_6G051530 PE=4 SV=1[more]
BLAST of CSPI07G10330 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G10330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190872|gb|KGN46076.1|3.4e-0966.20hypothetical protein Csa_6G051530 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G10330.1CSPI07G10330.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G10330Cucumber (Chinese Long) v3cpicucB414
CSPI07G10330Cucumber (Chinese Long) v3cpicucB417
CSPI07G10330Wild cucumber (PI 183967)cpicpiB193
CSPI07G10330Cucumber (Gy14) v1cgycpiB357
CSPI07G10330Cucumber (Chinese Long) v2cpicuB354
CSPI07G10330Cucumber (Chinese Long) v2cpicuB356
CSPI07G10330Melon (DHL92) v3.5.1cpimeB541
CSPI07G10330Melon (DHL92) v3.6.1cpimedB526
CSPI07G10330Cucumber (Gy14) v2cgybcpiB331