CSPI07G10300 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G10300
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 8420404 .. 8421505 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTTGCCCATCCACACCAATTACAATCTCAAAATCTCTTCTTTCTCTTCTTCCAAATCTTTCTCTCCTTAACCGGAGGGAAAGAAAACTTAATCGGTTGTTTTTCATACATATAGATAATGGGTGCCTGCGCTACCAAGCCTAAAGTTAAGGCCGATGATTTGGCTGCAATCCCTGCACCCGAACCTATTGATCATGACATTGTGAAGAACAACGAGGAAGTCAAATTCGTGGAAGAGGAAAAGAAGAGTGATCAGACCGATGAAAAAAAGAAGGAAAACAACGAGAAAGTTGTCGTCAAGGAGAAGAAGCCCCCGTCTCTCGCCTCCTTGCTCGTTGAGGTATACTTTATCTAATTTAATAGATTGAATATTTGAAGGCTTTCAAACAAAGTAGGAGATCTTGTTTTGAAAATTGTTTATGTAATTTATTTATTATGATTAGAAACCCACAAACTATAGAAGATAACTTGGGAGTAAATAAAGAACAAAGGTAAGTGTAACTTAGTGATTAGATATTTAGGTAAACGATACAAATATAGTTTGAGATGCTATAATAAATAAACATAGAATAATCATCTATGAAAATATAATTCCACTTGATAGAATATCTGGGATGTAACATTGCATATTGCATATTTGAAAGTAATTTTCAAATTATCAAAATCTTAAACATGCATTTAGGGTTCTTTTTATGAGTTTTTGAGTTCTTGATAAGGAAATTATTAAGCATGTGAATAAAATAGAAAAAAAATTGCACCTTCTTTTATAGAAGGAAGCCGCTCCGGCTGTAGAAGTTTCCGGCATACCGAAGGCCGAGGAAAAGCCGAAGGCGAAAGAAGTGGCAGCGCCAACTATTGAAGCAGAACTGAAGAAAAGCGAAGAGAAACCAAAAGAAAAGGATGAGAAAAGCGTATGATGATTTGAAAGAAGAAAATAAGGCGAAGCGCTCTTTATTTGAAATATAATTTTCTCTTCTGAAAAGCTATTCATTATTCAGTATGTTGTGCAAAGATTGGTAATCATTTCTAAGGTGTGGAGGGGTCTATGTTTCCTTTATCTATTAATATTCACTTTAATGAAATATTTAAAACTTCTTTTAG

mRNA sequence

ATGGGTGCCTGCGCTACCAAGCCTAAAGTTAAGGCCGATGATTTGGCTGCAATCCCTGCACCCGAACCTATTGATCATGACATTGTGAAGAACAACGAGGAAGTCAAATTCGTGGAAGAGGAAAAGAAGAGTGATCAGACCGATGAAAAAAAGAAGGAAAACAACGAGAAAGTTGTCGTCAAGGAGAAGAAGCCCCCGTCTCTCGCCTCCTTGCTCGTTGAGAAGGAAGCCGCTCCGGCTGTAGAAGTTTCCGGCATACCGAAGGCCGAGGAAAAGCCGAAGGCGAAAGAAGTGGCAGCGCCAACTATTGAAGCAGAACTGAAGAAAAGCGAAGAGAAACCAAAAGAAAAGGATGAGAAAAGCGTATGA

Coding sequence (CDS)

ATGGGTGCCTGCGCTACCAAGCCTAAAGTTAAGGCCGATGATTTGGCTGCAATCCCTGCACCCGAACCTATTGATCATGACATTGTGAAGAACAACGAGGAAGTCAAATTCGTGGAAGAGGAAAAGAAGAGTGATCAGACCGATGAAAAAAAGAAGGAAAACAACGAGAAAGTTGTCGTCAAGGAGAAGAAGCCCCCGTCTCTCGCCTCCTTGCTCGTTGAGAAGGAAGCCGCTCCGGCTGTAGAAGTTTCCGGCATACCGAAGGCCGAGGAAAAGCCGAAGGCGAAAGAAGTGGCAGCGCCAACTATTGAAGCAGAACTGAAGAAAAGCGAAGAGAAACCAAAAGAAAAGGATGAGAAAAGCGTATGA
Homology
[Close]
BLAST of CSPI07G10300 vs. TrEMBL
Match: A0A0A0K3E6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230950 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.4e-53
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1 

Query: 1   MGACATKPKVKADDLAAIPAPEPIDHDIVKNNEEVKFVEEEKKSDQTDEKKKENNEKVVV 60
           MGACATKPKVKADDLAAIPAPEPIDHDIVKNNEEVKFVEEEKKSDQTDEKKKENNEKVVV
Sbjct: 1   MGACATKPKVKADDLAAIPAPEPIDHDIVKNNEEVKFVEEEKKSDQTDEKKKENNEKVVV 60

Query: 61  KEKKPPSLASLLVEKEAAPAVEVSGIPKAEEKPKAKEVAAPTIEAELKKSEEKPKEKDEK 120
           KEKKPPSLASLLVEKEAAPAVEVSGIPKAEEKPKAKEVAAPTIEAELKKSEEKPKEKDEK
Sbjct: 61  KEKKPPSLASLLVEKEAAPAVEVSGIPKAEEKPKAKEVAAPTIEAELKKSEEKPKEKDEK 120

Query: 121 SV 123
           SV
Sbjct: 121 SV 122

[Close]
BLAST of CSPI07G10300 vs. NCBI nr
Match: gi|449444090|ref|XP_004139808.1| (PREDICTED: microtubule-associated protein 1B-like [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 3.5e-53
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1 

Query: 1   MGACATKPKVKADDLAAIPAPEPIDHDIVKNNEEVKFVEEEKKSDQTDEKKKENNEKVVV 60
           MGACATKPKVKADDLAAIPAPEPIDHDIVKNNEEVKFVEEEKKSDQTDEKKKENNEKVVV
Sbjct: 1   MGACATKPKVKADDLAAIPAPEPIDHDIVKNNEEVKFVEEEKKSDQTDEKKKENNEKVVV 60

Query: 61  KEKKPPSLASLLVEKEAAPAVEVSGIPKAEEKPKAKEVAAPTIEAELKKSEEKPKEKDEK 120
           KEKKPPSLASLLVEKEAAPAVEVSGIPKAEEKPKAKEVAAPTIEAELKKSEEKPKEKDEK
Sbjct: 61  KEKKPPSLASLLVEKEAAPAVEVSGIPKAEEKPKAKEVAAPTIEAELKKSEEKPKEKDEK 120

Query: 121 SV 123
           SV
Sbjct: 121 SV 122

[Close]
BLAST of CSPI07G10300 vs. NCBI nr
Match: gi|659092695|ref|XP_008447176.1| (PREDICTED: uncharacterized protein DDB_G0286299-like [Cucumis melo])

HSP 1 Score: 174.1 bits (440), Expect = 1.5e-40
Identity = 101/123 (82.11%), Postives = 111/123 (90.24%), Query Frame = 1 

Query: 1   MGACATKPKVKADDLAAIPAPEPIDHDIVKNNEEVKFVEEEKKSDQTDEKKKENNEKVVV 60
           MGACATKPKVK DDLAAIPAPEPIDHDIVKNNEE+K VEEEKK DQTDEKKKE+NEKV+V
Sbjct: 1   MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60

Query: 61  KEKKPPSLASLLVEKEAA-PAVEVSGIPKAEEKPKAKEVAAPTIEAELKKSEEKPKEKDE 120
           +++K PSLASLLVEKE A P VEVS IPKA+EKPK +EV APT EAE K+SEEKPKEK+E
Sbjct: 61  EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNE 120

Query: 121 KSV 123
           KSV
Sbjct: 121 KSV 123

The following BLAST results are available for this feature:
BLAST of CSPI07G10300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G10300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3E6_CUCSA2.4e-53100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230950 PE=4 SV=1[more]
BLAST of CSPI07G10300 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G10300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444090|ref|XP_004139808.1|3.5e-53100.00PREDICTED: microtubule-associated protein 1B-like [Cucumis sativus][more]
gi|659092695|ref|XP_008447176.1|1.5e-4082.11PREDICTED: uncharacterized protein DDB_G0286299-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G10300.1CSPI07G10300.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G10300Csa7G230950Cucumber (Chinese Long) v2cpicuB354
CSPI07G10300MELO3C012678Melon (DHL92) v3.5.1cpimeB541
CSPI07G10300MELO3C012678.2Melon (DHL92) v3.6.1cpimedB526
CSPI07G10300CsaV3_7G022290Cucumber (Chinese Long) v3cpicucB414
CSPI07G10300CsGy7G009740Cucumber (Gy14) v2cgybcpiB331
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G10300Cucumber (Chinese Long) v2cpicuB356
CSPI07G10300Cucumber (Chinese Long) v3cpicucB417
CSPI07G10300Wild cucumber (PI 183967)cpicpiB193
CSPI07G10300Cucumber (Gy14) v1cgycpiB357