CSPI07G09800 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G09800
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ty3/gypsy retrotransposon protein
Location	Chr7 : 7766154 .. 7767789 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTGGAGGTTCTGCGTTGATTACAGAAAATTAAATCAAGTAACCATATCGGATAAATTTTCAATACCCGTGATAGAGGAATTGCTAGACGAATTGCATGGGGCCACAGTTTTCTCAAAATTGGATCTCAAATCTGGATATCATCAGATACGGATGAAGGAGGATGATGTGGAAAAGACAGCGTTCAGAACCCATGAAGGACACTACGAGTTTCTGGTCATGCCGTTCGGCCTCACTAACGCACCAGCTACTTTCCAATCATTAATGAATCAGGTCTTTAAACCCTTCCTCAGGAGTTGTGTACTGGTATTTTTTGATGATATATTAGTGTACAGCACAGATCTCACAGAGCACGAAAAGCATTTGGGCATGGTTTTTGCAGTAATGCGGGATAACCAATTAGTTGCCAACAAAAAAAAATGCGTAATAGCTCATTCACAGATTCAATATTTGGGGCATTTAATATCCAGTAGAGGGGTTGAAGCTGATGGAGAAAAGATCAAGGATATGGTAAATTGGCCCCAACCCAAAGATGTAACCGGATTGAGGGGGTTCTTAGGTCTGACTGGTTACTATAGAAGATTCGTCAAAGGGTATGGAGAGATAGCAGGACCGTTGACCAAATTATTGCAGAAGAACTCATTCCTATGGGGGGAAGAAGCAACAGAGGCGTTTGATAAGCTGAAATTAGCCATGACAACCCTACCTGTACTAGCTCTACCAGATTGGAACCTACCTTTCATCATTGAAACGGATGCGTCCGGGATTGCTTTAGGGGCAGTTCTATCTCAAAATGGCCATCCCATAGCTTTTTTCAGTCAAATACTATCGAACCGAGCTAAAACCAAATCCATATATGAGAGGGAATTGATGGCTGTGGTTCTGTCGGTACAGAAGTGAAGACATTACCTTTTGGGAAGGAAGTTTACAATCATCTCAGATCAGAGGGCCCTCAAATTCCTTTTAGAGCAGAGGGAAGTGCAACCCCAATTCCAGAAGTGGCTGACTAAACTCCTCGGGTATGACTTCGAAATACTTTACCAACCCGGATTACAAAACAAAGCAGTCGATGCCCTCTCCCAAATCGAACAGCCAGTGGAAATGAGGAGTATGTCCACCACGGGTATTGTCAACATGGTGGTGGTTGAGAAGGAAGTTGAGTTAGATGAAGAGCTCAAGGCAATCATTGAAGAATTAAAAAAAAATCCTCACGAGTCCAATAAATTCCAATGGGTGAATGGAAACCTACTGTATAAGAAGCGAATTGTTTTGTCAAAAGAATCCACTCTGATCCCCACCTTACTACATACGTTTCATGACTCCATTTTAGGAGGCCATTCCGGATTCTTAAGGACGTATAAAAGGATGTGTGGGGAATTGTATTGGAAAGGTATGAAGGCTGATGTTAAAAAATATGTGCAGGAATGCGAGGTTTGCCAGAGAAATAAGTTGGAAGCAACTAAACCAGCTGGAGTTCTGCAGCCAATTCCAATTCCAGAAAGAATCTTGGAAGGCTGGTCCATGGACTTCATTGAAGGGCTACCTAAAGCAGGAGGTATGAATGTAATAATGGTAATTGTGGACAGGCTGAGCAAATACTCCTACTTTATCACCATGAGGCATCCTTTTAA

mRNA sequence

ATGGAGGGTGGAGTTTTCTCAAAATTGGATCTCAAATCTGGATATCATCAGATACGGATGAAGGAGGATGATGTGGAAAAGACAGCGTTCAGAACCCATGAAGGACACTACGAGTTTCTGGTCATGCCGTTCGGCCTCACTAACGCACCAGCTACTTTCCAATCATTAATGAATCAGGTCTTTAAACCCTTCCTCAGGAGTTGTGTACTGGTATTTTTTGATGATATATTAGTGTACAGCACAGATCTCACAGAGCACGAAAAGCATTTGGGCATGGTTTTTGCAGTAATGCGGGATAACCAATTAGTTGCCAACAAAAAAAAATGCGTAATAGCTCATTCACAGATTCAATATTTGGGGCATTTAATATCCAGTAGAGGGGTTGAAGCTGATGGAGAAAAGATCAAGGATATGGTAAATTGGCCCCAACCCAAAGATGTAACCGGATTGAGGGGGTTCTTAGGTCTGACTGGTTACTATAGAAGATTCGTCAAAGGGTATGGAGAGATAGCAGGACCGTTGACCAAATTATTGCAGAAGAACTCATTCCTATGGGGGGAAGAAGCAACAGAGGCGTTTGATAAGCTGAAATTAGCCATGACAACCCTACCTGTACTAGCTCTACCAGATTGGAACCTACCTTTCATCATTGAAACGGATGCGTCCGGGATTGCTTTAGGGGCAGTTCTATCTCAAAATGGCCATCCCATAGCTTTTTTCAGTCAAATACTATCGAACCGAGCTAAAACCAAATCCATATATGAGAGGGAATTGATGGCTGTGGTTCTGTCGAGGGAAGTGCAACCCCAATTCCAGAAGTGGCTGACTAAACTCCTCGGGTATGACTTCGAAATACTTTACCAACCCGGATTACAAAACAAAGCAGTCGATGCCCTCTCCCAAATCGAACAGCCAGTGGAAATGAGGAGTATGTCCACCACGGGTATTGTCAACATGGTGGTGGTTGAGAAGGAAGTTGAGTTAGATGAAGAGCTCAAGGCAATCATTGAAGAATTAAAAAAAAATCCTCACGAGTCCAATAAATTCCAATGGGTGAATGGAAACCTACTGTATAAGAAGCGAATTGTTTTGTCAAAAGAATCCACTCTGATCCCCACCTTACTACATACGTTTCATGACTCCATTTTAGGAGGCCATTCCGGATTCTTAAGGACGTATAAAAGGATGTGTGGGGAATTGTATTGGAAAGGTATGAAGGCTGATGTTAAAAAATATGTGCAGGAATGCGAGGTTTGCCAGAGAAATAAGTTGGAAGCAACTAAACCAGCTGGAGTTCTGCAGCCAATTCCAATTCCAGAAAGAATCTTGGAAGGCTGGTCCATGGACTTCATTGAAGGGCTACCTAAAGCAGGAGGTATGAATGCTGAGCAAATACTCCTACTTTATCACCATGAGGCATCCTTTTAA

Coding sequence (CDS)

ATGGAGGGTGGAGTTTTCTCAAAATTGGATCTCAAATCTGGATATCATCAGATACGGATGAAGGAGGATGATGTGGAAAAGACAGCGTTCAGAACCCATGAAGGACACTACGAGTTTCTGGTCATGCCGTTCGGCCTCACTAACGCACCAGCTACTTTCCAATCATTAATGAATCAGGTCTTTAAACCCTTCCTCAGGAGTTGTGTACTGGTATTTTTTGATGATATATTAGTGTACAGCACAGATCTCACAGAGCACGAAAAGCATTTGGGCATGGTTTTTGCAGTAATGCGGGATAACCAATTAGTTGCCAACAAAAAAAAATGCGTAATAGCTCATTCACAGATTCAATATTTGGGGCATTTAATATCCAGTAGAGGGGTTGAAGCTGATGGAGAAAAGATCAAGGATATGGTAAATTGGCCCCAACCCAAAGATGTAACCGGATTGAGGGGGTTCTTAGGTCTGACTGGTTACTATAGAAGATTCGTCAAAGGGTATGGAGAGATAGCAGGACCGTTGACCAAATTATTGCAGAAGAACTCATTCCTATGGGGGGAAGAAGCAACAGAGGCGTTTGATAAGCTGAAATTAGCCATGACAACCCTACCTGTACTAGCTCTACCAGATTGGAACCTACCTTTCATCATTGAAACGGATGCGTCCGGGATTGCTTTAGGGGCAGTTCTATCTCAAAATGGCCATCCCATAGCTTTTTTCAGTCAAATACTATCGAACCGAGCTAAAACCAAATCCATATATGAGAGGGAATTGATGGCTGTGGTTCTGTCGAGGGAAGTGCAACCCCAATTCCAGAAGTGGCTGACTAAACTCCTCGGGTATGACTTCGAAATACTTTACCAACCCGGATTACAAAACAAAGCAGTCGATGCCCTCTCCCAAATCGAACAGCCAGTGGAAATGAGGAGTATGTCCACCACGGGTATTGTCAACATGGTGGTGGTTGAGAAGGAAGTTGAGTTAGATGAAGAGCTCAAGGCAATCATTGAAGAATTAAAAAAAAATCCTCACGAGTCCAATAAATTCCAATGGGTGAATGGAAACCTACTGTATAAGAAGCGAATTGTTTTGTCAAAAGAATCCACTCTGATCCCCACCTTACTACATACGTTTCATGACTCCATTTTAGGAGGCCATTCCGGATTCTTAAGGACGTATAAAAGGATGTGTGGGGAATTGTATTGGAAAGGTATGAAGGCTGATGTTAAAAAATATGTGCAGGAATGCGAGGTTTGCCAGAGAAATAAGTTGGAAGCAACTAAACCAGCTGGAGTTCTGCAGCCAATTCCAATTCCAGAAAGAATCTTGGAAGGCTGGTCCATGGACTTCATTGAAGGGCTACCTAAAGCAGGAGGTATGAATGCTGAGCAAATACTCCTACTTTATCACCATGAGGCATCCTTTTAA

Homology

[Close]

BLAST of CSPI07G09800 vs. Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.6e-67
Identity = 133/328 (40.55%), Postives = 194/328 (59.15%), Query Frame = 1


Query: 6   FSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFL 65
           F+ +DL  G+HQI M E+ + KTAF T  GHYE+L MPFGL NAPATFQ  MN + +P L
Sbjct: 297 FTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLL 356

Query: 66  RSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLISS 125
               LV+ DDI+++ST LTEH   + +VF  + D  L     KC     +  +LGH+++ 
Sbjct: 357 NKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTP 416

Query: 126 RGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFLW 185
            G++ +  K+K +V++P P     +R FLGLTGYYR+F+  Y +IA P+T  L+K + + 
Sbjct: 417 DGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKID 476

Query: 186 GE--EATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQI 245
            +  E  EAF+KLK  +   P+L LPD+   F++ TDAS +ALGAVLSQNGHPI+F S+ 
Sbjct: 477 TQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRT 536

Query: 246 LSNRAKTKSIYERELMAVV----------------LSREVQP------------QFQKWL 304
           L++     S  E+EL+A+V                ++ + QP            + ++W 
Sbjct: 537 LNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWR 596

[Close]

BLAST of CSPI07G09800 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.2e-66
Identity = 164/513 (31.97%), Postives = 263/513 (51.27%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +F+KLDLKS YH IR+++ D  K AFR   G +E+LVMP+G++ APA FQ  +N +    
Sbjct: 497  IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
              S V+ + DDIL++S   +EH KH+  V   +++  L+ N+ KC    SQ++++G+ IS
Sbjct: 557  KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKN-SF 184
             +G     E I  ++ W QPK+   LR FLG   Y R+F+    ++  PL  LL+K+  +
Sbjct: 617  EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676

Query: 185  LWGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNG-----HPIA 244
             W    T+A + +K  + + PVL   D++   ++ETDAS +A+GAVLSQ       +P+ 
Sbjct: 677  KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736

Query: 245  FFSQILS----NRAKTKSIYERELMAVV-----------------------------LSR 304
            ++S  +S    N + +    ++E++A++                             ++ 
Sbjct: 737  YYSAKMSKAQLNYSVS----DKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITN 796

Query: 305  EVQPQ---FQKWLTKLLGYDFEILYQPGLQNKAVDALSQI---EQPVEMRSMSTT-GIVN 364
            E +P+     +W   L  ++FEI Y+PG  N   DALS+I    +P+   S   +   VN
Sbjct: 797  ESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVN 856

Query: 365  MVVVEK--------EVELDEELKAIIEELKKNPHESNKFQWVNGNLLYKK-RIVLSKEST 424
             + +          E   D +L  ++    K   E+   Q  +G L+  K +I+L  ++ 
Sbjct: 857  QISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEEN--IQLKDGLLINSKDQILLPNDTQ 916

Query: 425  LIPTLLHTFHDSILGGHSGFLRTYKRMCGELYWKGMKADVKKYVQECEVCQRNKLEATKP 463
            L  T++  +H+     H G       +     WKG++  +++YVQ C  CQ NK    KP
Sbjct: 917  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 976

[Close]

BLAST of CSPI07G09800 vs. Swiss-Prot
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-9 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.2e-66
Identity = 164/513 (31.97%), Postives = 263/513 (51.27%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +F+KLDLKS YH IR+++ D  K AFR   G +E+LVMP+G++ APA FQ  +N +    
Sbjct: 497  IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
              S V+ + DDIL++S   +EH KH+  V   +++  L+ N+ KC    SQ++++G+ IS
Sbjct: 557  KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKN-SF 184
             +G     E I  ++ W QPK+   LR FLG   Y R+F+    ++  PL  LL+K+  +
Sbjct: 617  EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676

Query: 185  LWGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNG-----HPIA 244
             W    T+A + +K  + + PVL   D++   ++ETDAS +A+GAVLSQ       +P+ 
Sbjct: 677  KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736

Query: 245  FFSQILS----NRAKTKSIYERELMAVV-----------------------------LSR 304
            ++S  +S    N + +    ++E++A++                             ++ 
Sbjct: 737  YYSAKMSKAQLNYSVS----DKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITN 796

Query: 305  EVQPQ---FQKWLTKLLGYDFEILYQPGLQNKAVDALSQI---EQPVEMRSMSTT-GIVN 364
            E +P+     +W   L  ++FEI Y+PG  N   DALS+I    +P+   S   +   VN
Sbjct: 797  ESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVN 856

Query: 365  MVVVEK--------EVELDEELKAIIEELKKNPHESNKFQWVNGNLLYKK-RIVLSKEST 424
             + +          E   D +L  ++    K   E+   Q  +G L+  K +I+L  ++ 
Sbjct: 857  QISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEEN--IQLKDGLLINSKDQILLPNDTQ 916

Query: 425  LIPTLLHTFHDSILGGHSGFLRTYKRMCGELYWKGMKADVKKYVQECEVCQRNKLEATKP 463
            L  T++  +H+     H G       +     WKG++  +++YVQ C  CQ NK    KP
Sbjct: 917  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 976

[Close]

BLAST of CSPI07G09800 vs. Swiss-Prot
Match: TF26_SCHPO (Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-6 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.2e-66
Identity = 164/513 (31.97%), Postives = 263/513 (51.27%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +F+KLDLKS YH IR+++ D  K AFR   G +E+LVMP+G++ APA FQ  +N +    
Sbjct: 497  IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
              S V+ + DDIL++S   +EH KH+  V   +++  L+ N+ KC    SQ++++G+ IS
Sbjct: 557  KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKN-SF 184
             +G     E I  ++ W QPK+   LR FLG   Y R+F+    ++  PL  LL+K+  +
Sbjct: 617  EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676

Query: 185  LWGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNG-----HPIA 244
             W    T+A + +K  + + PVL   D++   ++ETDAS +A+GAVLSQ       +P+ 
Sbjct: 677  KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736

Query: 245  FFSQILS----NRAKTKSIYERELMAVV-----------------------------LSR 304
            ++S  +S    N + +    ++E++A++                             ++ 
Sbjct: 737  YYSAKMSKAQLNYSVS----DKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITN 796

Query: 305  EVQPQ---FQKWLTKLLGYDFEILYQPGLQNKAVDALSQI---EQPVEMRSMSTT-GIVN 364
            E +P+     +W   L  ++FEI Y+PG  N   DALS+I    +P+   S   +   VN
Sbjct: 797  ESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVN 856

Query: 365  MVVVEK--------EVELDEELKAIIEELKKNPHESNKFQWVNGNLLYKK-RIVLSKEST 424
             + +          E   D +L  ++    K   E+   Q  +G L+  K +I+L  ++ 
Sbjct: 857  QISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEEN--IQLKDGLLINSKDQILLPNDTQ 916

Query: 425  LIPTLLHTFHDSILGGHSGFLRTYKRMCGELYWKGMKADVKKYVQECEVCQRNKLEATKP 463
            L  T++  +H+     H G       +     WKG++  +++YVQ C  CQ NK    KP
Sbjct: 917  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 976

[Close]

BLAST of CSPI07G09800 vs. Swiss-Prot
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.2e-66
Identity = 164/513 (31.97%), Postives = 263/513 (51.27%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +F+KLDLKS YH IR+++ D  K AFR   G +E+LVMP+G++ APA FQ  +N +    
Sbjct: 497  IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
              S V+ + DDIL++S   +EH KH+  V   +++  L+ N+ KC    SQ++++G+ IS
Sbjct: 557  KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKN-SF 184
             +G     E I  ++ W QPK+   LR FLG   Y R+F+    ++  PL  LL+K+  +
Sbjct: 617  EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676

Query: 185  LWGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNG-----HPIA 244
             W    T+A + +K  + + PVL   D++   ++ETDAS +A+GAVLSQ       +P+ 
Sbjct: 677  KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736

Query: 245  FFSQILS----NRAKTKSIYERELMAVV-----------------------------LSR 304
            ++S  +S    N + +    ++E++A++                             ++ 
Sbjct: 737  YYSAKMSKAQLNYSVS----DKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITN 796

Query: 305  EVQPQ---FQKWLTKLLGYDFEILYQPGLQNKAVDALSQI---EQPVEMRSMSTT-GIVN 364
            E +P+     +W   L  ++FEI Y+PG  N   DALS+I    +P+   S   +   VN
Sbjct: 797  ESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVN 856

Query: 365  MVVVEK--------EVELDEELKAIIEELKKNPHESNKFQWVNGNLLYKK-RIVLSKEST 424
             + +          E   D +L  ++    K   E+   Q  +G L+  K +I+L  ++ 
Sbjct: 857  QISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEEN--IQLKDGLLINSKDQILLPNDTQ 916

Query: 425  LIPTLLHTFHDSILGGHSGFLRTYKRMCGELYWKGMKADVKKYVQECEVCQRNKLEATKP 463
            L  T++  +H+     H G       +     WKG++  +++YVQ C  CQ NK    KP
Sbjct: 917  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 976

[Close]

BLAST of CSPI07G09800 vs. TrEMBL
Match: A0A087G3S6_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs46225U000100 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 1.6e-145
Identity = 255/491 (51.93%), Postives = 349/491 (71.08%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +FSKLDLKSGYHQI +K +DV KTAFRTH+GHYEFLVMPFGLTNAPATFQSLMN VF+ +
Sbjct: 727  IFSKLDLKSGYHQILVKAEDVAKTAFRTHDGHYEFLVMPFGLTNAPATFQSLMNDVFRGY 786

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
            LR  VLVFFDDILVYS  L EH++HLG+V  +++ +QL ANKKKC    ++++YLGH++S
Sbjct: 787  LRKFVLVFFDDILVYSKSLQEHQQHLGLVLELLQQHQLFANKKKCEFGRTELEYLGHVVS 846

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFL 184
             +GV AD EKI+ MV+WP+P++V  LRGFLGLTGYYR+FV+ YGEIA PLT LL+K+ F 
Sbjct: 847  GKGVAADPEKIQAMVSWPEPQNVKALRGFLGLTGYYRKFVQRYGEIARPLTALLKKDQFQ 906

Query: 185  WGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQIL 244
            W  EAT AF KLK AM+T+PVLAL D+   F++E+DASG  LGAVL Q+  P+A+FSQ L
Sbjct: 907  WTAEATVAFQKLKKAMSTVPVLALVDFTEQFVVESDASGTGLGAVLMQSQRPLAYFSQAL 966

Query: 245  SNRAKTKSIYERELMAVVLS----------------------------REVQPQFQKWLT 304
            + R + KS+YERELMA+V +                            RE+  ++QKWLT
Sbjct: 967  TERQRLKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQKSLKFLLEQREINMEYQKWLT 1026

Query: 305  KLLGYDFEILYQPGLQNKAVDALSQIEQPVEMRSMSTTGIVNMVVVEKEVELDEELKAII 364
            KLLG+DFEI Y+PGL+NKA DALS+ +  +++ ++S    + +  +  EV+ D +L+ + 
Sbjct: 1027 KLLGFDFEIQYKPGLENKAADALSRKDMALQLCALSIPAAIQLEQINTEVDNDPDLRKLK 1086

Query: 365  EELKKNPHESNKFQWVNGNLLYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRM 424
            EE+ ++    ++F  V G LL K ++V+  +S L+  +L  FH+  LGGH G L+T KR+
Sbjct: 1087 EEVLQDAASHSEFSVVQGRLLRKGKLVVPAQSRLVNVILQEFHNGKLGGHGGVLKTQKRV 1146

Query: 425  CGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEGWSMDFIEGLPK 468
                YWKGM + ++++V  C+VCQR+K     PAG+LQP+PIP+++ E  SMDF+EGLPK
Sbjct: 1147 EAIFYWKGMMSRIREFVAACQVCQRHKYSTLAPAGLLQPLPIPDQVWEDISMDFVEGLPK 1206

[Close]

BLAST of CSPI07G09800 vs. TrEMBL
Match: A0A087GEK8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G499800 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 1.8e-144
Identity = 259/486 (53.29%), Postives = 343/486 (70.58%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            VFSKLDLKSGYHQI +K  +V KTAFRTH+GHYEFLVMPFGLTNAP TFQ+LMN+VF+  
Sbjct: 701  VFSKLDLKSGYHQILVKPQNVPKTAFRTHDGHYEFLVMPFGLTNAPTTFQALMNEVFRAH 760

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
            LR  VLVFFDDILVYS+ L EH++HL +V  ++   QL ANKKKC    S I+YLGH+IS
Sbjct: 761  LRKFVLVFFDDILVYSSSLQEHQEHLRVVLQILFQQQLFANKKKCQFGSSSIEYLGHVIS 820

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFL 184
              GV AD  K++ MV+WP PK++  LRGFLGLTGYYRRFV+GYG IA PLT LL+K+ F 
Sbjct: 821  GEGVSADPSKLQAMVSWPLPKNIKALRGFLGLTGYYRRFVQGYGSIAKPLTSLLKKDKFQ 880

Query: 185  WGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQIL 244
            W EEAT AF+KLK+AM+T+PVLAL D++  F++E+DASGI LGAVL Q   P+A+FSQ L
Sbjct: 881  WSEEATVAFEKLKVAMSTVPVLALVDFSELFVVESDASGIGLGAVLLQKQKPVAYFSQAL 940

Query: 245  SNRAKTKSIYERELMAVVLS----------------------------REVQPQFQKWLT 304
            ++R K KS+YERELMA+V +                            REV  ++Q+WLT
Sbjct: 941  TDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFLVRTDQKSLKFLLEQREVNLEYQQWLT 1000

Query: 305  KLLGYDFEILYQPGLQNKAVDALSQIEQPVEMRSMSTTGIVNMVVVEKEVELDEELKAII 364
            K+LG++F+I Y+PGL+NKA DALS++E   ++ ++S    + +  + +EV+ +   K I 
Sbjct: 1001 KILGFNFDIHYKPGLENKAADALSRVEGLPQLYALSVPAAIQLEEINEEVDRNPVSKKIK 1060

Query: 365  EELKKNPHESNKFQWVNGNLLYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRM 424
            EE+  +    + +  V G LLY  ++VL KES LI  LLH FH+S +GGH G L+T + +
Sbjct: 1061 EEVLLDASTHSGYSVVQGRLLYNGKLVLPKESYLIKVLLHEFHNSRMGGHGGVLKTQRHL 1120

Query: 425  CGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEGWSMDFIEGLPK 463
                YW+GM AD+K +V EC VCQ++K     P+G+LQP+PIP ++ E  S+DF+EGLPK
Sbjct: 1121 GALFYWQGMMADIKTFVAECVVCQKHKYSTLAPSGLLQPLPIPTQVWEDISLDFVEGLPK 1180

[Close]

BLAST of CSPI07G09800 vs. TrEMBL
Match: A0A087FZI0_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs71112U000100 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 5.2e-144
Identity = 250/491 (50.92%), Postives = 343/491 (69.86%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +FSKLDL++GYHQIR++ +DV KTAFRTH+GHYEFLVMPFGLTNAP+TFQSLMN +F+P+
Sbjct: 526  IFSKLDLRAGYHQIRVRAEDVPKTAFRTHDGHYEFLVMPFGLTNAPSTFQSLMNDLFRPY 585

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
            LR  VL+ FDDILVYS    EH+ HL  V  V+ DNQL AN KKC     ++ YLGH+IS
Sbjct: 586  LRRFVLMLFDDILVYSKSEAEHQGHLRTVLQVLTDNQLFANSKKCQFGSQKVDYLGHVIS 645

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFL 184
            + GV AD  K++ MV+WP P++V  LRGFLGLTGYYR+FVKGYGEIA PLT LL+K+ F 
Sbjct: 646  AEGVAADPAKVQAMVDWPVPRNVKALRGFLGLTGYYRKFVKGYGEIARPLTALLKKDQFQ 705

Query: 185  WGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQIL 244
            W ++  +AF  LK+AM+T+PVLAL D++LPF+IE+DASG+ LGAVL Q   PIA+FSQ  
Sbjct: 706  WSQKVEDAFQSLKVAMSTVPVLALVDFSLPFVIESDASGVGLGAVLMQQKQPIAYFSQAQ 765

Query: 245  SNRAKTKSIYERELMAVVLS----------------------------REVQPQFQKWLT 304
            + R + KS+YERELMA+V +                            RE+  ++Q+WLT
Sbjct: 766  TERQRLKSVYERELMAIVFAIQKWKHYLLGRKFLVRTDQKSLKFLLEQREINLEYQRWLT 825

Query: 305  KLLGYDFEILYQPGLQNKAVDALSQIEQPVEMRSMSTTGIVNMVVVEKEVELDEELKAII 364
            K+LG+DFEI Y+PGL+NKA DALS+I+   ++ ++S    + +  +++ +E DEEL  + 
Sbjct: 826  KILGFDFEIQYKPGLENKAADALSRIDAVPQLCALSMHVAIQLSEIDEAIEKDEELSKLK 885

Query: 365  EELKKNPHESNKFQWVNGNLLYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRM 424
            +E+  +      +  V G L  K R+VL   S L+  +L  FHD  +GGH G L+T +R+
Sbjct: 886  QEVVTDATSHPDYSVVQGRLFMKGRLVLPAASPLVKLVLQEFHDGKMGGHGGVLKTQRRV 945

Query: 425  CGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEGWSMDFIEGLPK 468
                +WKGM AD+++YV EC+VCQR+K     PAG+LQP+P+P+++ E  SMDF+EGLPK
Sbjct: 946  SEMFFWKGMLADIRQYVVECQVCQRHKYSTLAPAGLLQPLPVPKQVWEDISMDFVEGLPK 1005

[Close]

BLAST of CSPI07G09800 vs. TrEMBL
Match: A0A087HFW3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA2G074100 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 6.8e-144
Identity = 258/491 (52.55%), Postives = 342/491 (69.65%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +FSKLDLKSGYHQI +K +DV KTAFRTH+GHYEFLVMPFGLTNAPATFQSLMN VF+ +
Sbjct: 721  IFSKLDLKSGYHQILVKAEDVAKTAFRTHDGHYEFLVMPFGLTNAPATFQSLMNDVFRGY 780

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
            LR  VLVFFDDILVYS  L EH++HLG V A+++ +QL AN+KKC    S+++YLGH++S
Sbjct: 781  LRKFVLVFFDDILVYSKSLQEHQQHLGQVLALLQKHQLFANQKKCDFGRSKLEYLGHVVS 840

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFL 184
             +GV AD EKI+ MV+W +P++V  LRGFLGLTGYYR+FV+GYGEIA PLT LL+K+ F 
Sbjct: 841  GQGVAADPEKIQAMVSWSEPQNVKALRGFLGLTGYYRKFVQGYGEIARPLTALLKKDQFH 900

Query: 185  WGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQIL 244
            W  EAT AF +LK AM+T+PVLAL D+   F++E+DASG  LGAVL Q   P+A+FSQ L
Sbjct: 901  WTAEATMAFQQLKKAMSTVPVLALVDFTEQFVVESDASGTGLGAVLMQQQRPLAYFSQAL 960

Query: 245  SNRAKTKSIYERELMAVVLS----------------------------REVQPQFQKWLT 304
            + R + KS+YERELMA+V +                            RE+  ++QKWLT
Sbjct: 961  TERQRLKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQKSLKFLLEQREINLEYQKWLT 1020

Query: 305  KLLGYDFEILYQPGLQNKAVDALSQIEQPVEMRSMSTTGIVNMVVVEKEVELDEELKAII 364
            KLLG+DFEI Y+PGL+NKA DALS+ +  V M ++S    + +  +  EV+ D +L  + 
Sbjct: 1021 KLLGFDFEIQYKPGLENKAADALSRKDIAVHMCALSVPAAIQLAHINTEVDKDPDLHKLK 1080

Query: 365  EELKKNPHESNKFQWVNGNLLYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRM 424
            +E+  +    ++F  V G LL K ++VL   S L+  +L  FH   LGGH G L+T KR+
Sbjct: 1081 QEVLLDTAAHSEFSVVQGRLLRKGKLVLPATSLLVDVILQEFHTGKLGGHGGVLKTQKRI 1140

Query: 425  CGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEGWSMDFIEGLPK 468
                YWKGM + ++ +V  C+VCQR+K     PAG+LQP+PIPE++ E  SMDF+EGLPK
Sbjct: 1141 AEVFYWKGMMSRIRDFVAACQVCQRHKYSTLAPAGLLQPLPIPEQVWEDISMDFVEGLPK 1200

[Close]

BLAST of CSPI07G09800 vs. TrEMBL
Match: A0A087G291_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AAs48021U000700 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 3.1e-141
Identity = 252/491 (51.32%), Postives = 340/491 (69.25%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +FSKLDL++GYHQIR+K +DV KTAFRTH+GHYEFLVMPFGLTNAP TFQSLMN+VF+ F
Sbjct: 691  IFSKLDLRAGYHQIRVKAEDVPKTAFRTHDGHYEFLVMPFGLTNAPGTFQSLMNEVFRKF 750

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
            LR  VLVFFDDIL+YS    EH++HL +V   + +NQLVAN+KKC     +I+YLGH+IS
Sbjct: 751  LRRFVLVFFDDILIYSKTEVEHQEHLRLVLKALAENQLVANRKKCEFGRVEIEYLGHVIS 810

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFL 184
            ++GV AD  K++ MV WP P ++  LRGFLGLTGYYR+FVK YGEIA PLT LL+K+ F 
Sbjct: 811  AKGVAADPAKVQAMVEWPSPGNIKALRGFLGLTGYYRKFVKKYGEIARPLTALLKKDQFK 870

Query: 185  WGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQIL 244
            W   A EAF  LK+AM+T+PVLAL D+++ F++E+DASGI LGAVL Q   PIA+FSQ L
Sbjct: 871  WSPAAEEAFKSLKIAMSTVPVLALVDFSVQFVVESDASGIGLGAVLMQQQQPIAYFSQAL 930

Query: 245  SNRAKTKSIYERELMAVVLS----------------------------REVQPQFQKWLT 304
            + R + KS+YERELMA+V +                            REV  ++ KWLT
Sbjct: 931  TERQRLKSVYERELMAIVFAIRKWRHYLLGRKFLVRTDQKSLKFLLEQREVNMEYHKWLT 990

Query: 305  KLLGYDFEILYQPGLQNKAVDALSQIEQPVEMRSMSTTGIVNMVVVEKEVELDEELKAII 364
            K+LG+DF+I Y+PG++NKA DALS++E P ++ ++S    + +  +E EV+ DEEL  + 
Sbjct: 991  KILGFDFDIQYKPGMENKAADALSRVEGP-QLFALSMPIAIQLSEIESEVDKDEELSKLK 1050

Query: 365  EELKKNPHESNKFQWVNGNLLYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRM 424
              ++ +P +   +  V G LL K R+VL + S LI  +L  FHD  +GGH G ++T K +
Sbjct: 1051 LSVRDSPAKHPDYSVVQGRLLRKGRMVLPQNSKLISLILKEFHDGKMGGHGGVVKTQKGI 1110

Query: 425  CGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEGWSMDFIEGLPK 468
                YW  M +++K YV  C+VCQR+K     PAG+LQP+PIP+++ E    DF+EGLPK
Sbjct: 1111 SAVFYWDKMMSEIKSYVAACQVCQRHKYSTLTPAGLLQPLPIPKQVWE----DFVEGLPK 1170

[Close]

BLAST of CSPI07G09800 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-39
Identity = 79/130 (60.77%), Postives = 92/130 (70.77%), Query Frame = 1


Query: 89  HLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGH--LISSRGVEADGEKIKDMVNWPQPKD 148
           HLGMV  +   +Q  AN+KKC     QI YLGH  +IS  GV AD  K++ MV WP+PK+
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 149 VTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFLWGEEATEAFDKLKLAMTTLPVL 208
            T LRGFLGLTGYYRRFVK YG+I  PLT+LL+KNS  W E A  AF  LK A+TTLPVL
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

Query: 209 ALPDWNLPFI 217
           ALPD  LPF+
Sbjct: 123 ALPDLKLPFV 132

[Close]

BLAST of CSPI07G09800 vs. NCBI nr
Match: gi|674230743|gb|KFK24528.1| (hypothetical protein AALP_AAs46225U000100, partial [Arabis alpina])

HSP 1 Score: 524.2 bits (1349), Expect = 2.3e-145
Identity = 255/491 (51.93%), Postives = 349/491 (71.08%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +FSKLDLKSGYHQI +K +DV KTAFRTH+GHYEFLVMPFGLTNAPATFQSLMN VF+ +
Sbjct: 727  IFSKLDLKSGYHQILVKAEDVAKTAFRTHDGHYEFLVMPFGLTNAPATFQSLMNDVFRGY 786

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
            LR  VLVFFDDILVYS  L EH++HLG+V  +++ +QL ANKKKC    ++++YLGH++S
Sbjct: 787  LRKFVLVFFDDILVYSKSLQEHQQHLGLVLELLQQHQLFANKKKCEFGRTELEYLGHVVS 846

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFL 184
             +GV AD EKI+ MV+WP+P++V  LRGFLGLTGYYR+FV+ YGEIA PLT LL+K+ F 
Sbjct: 847  GKGVAADPEKIQAMVSWPEPQNVKALRGFLGLTGYYRKFVQRYGEIARPLTALLKKDQFQ 906

Query: 185  WGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQIL 244
            W  EAT AF KLK AM+T+PVLAL D+   F++E+DASG  LGAVL Q+  P+A+FSQ L
Sbjct: 907  WTAEATVAFQKLKKAMSTVPVLALVDFTEQFVVESDASGTGLGAVLMQSQRPLAYFSQAL 966

Query: 245  SNRAKTKSIYERELMAVVLS----------------------------REVQPQFQKWLT 304
            + R + KS+YERELMA+V +                            RE+  ++QKWLT
Sbjct: 967  TERQRLKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQKSLKFLLEQREINMEYQKWLT 1026

Query: 305  KLLGYDFEILYQPGLQNKAVDALSQIEQPVEMRSMSTTGIVNMVVVEKEVELDEELKAII 364
            KLLG+DFEI Y+PGL+NKA DALS+ +  +++ ++S    + +  +  EV+ D +L+ + 
Sbjct: 1027 KLLGFDFEIQYKPGLENKAADALSRKDMALQLCALSIPAAIQLEQINTEVDNDPDLRKLK 1086

Query: 365  EELKKNPHESNKFQWVNGNLLYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRM 424
            EE+ ++    ++F  V G LL K ++V+  +S L+  +L  FH+  LGGH G L+T KR+
Sbjct: 1087 EEVLQDAASHSEFSVVQGRLLRKGKLVVPAQSRLVNVILQEFHNGKLGGHGGVLKTQKRV 1146

Query: 425  CGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEGWSMDFIEGLPK 468
                YWKGM + ++++V  C+VCQR+K     PAG+LQP+PIP+++ E  SMDF+EGLPK
Sbjct: 1147 EAIFYWKGMMSRIREFVAACQVCQRHKYSTLAPAGLLQPLPIPDQVWEDISMDFVEGLPK 1206

[Close]

BLAST of CSPI07G09800 vs. NCBI nr
Match: gi|923614274|ref|XP_013745228.1| (PREDICTED: uncharacterized protein LOC106447810 [Brassica napus])

HSP 1 Score: 523.5 bits (1347), Expect = 3.9e-145
Identity = 260/491 (52.95%), Postives = 341/491 (69.45%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            VFSKLDLKSGYHQI +K +DV+KTAFRTH+GHYEFLVMPFGL+NAPATFQSLMN++F+ +
Sbjct: 729  VFSKLDLKSGYHQILVKAEDVQKTAFRTHDGHYEFLVMPFGLSNAPATFQSLMNEIFRSY 788

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
            LR  VLVFFDDILVYS   +EHE+HL +V  V+++  L AN+KKC    S+I+YLGH+IS
Sbjct: 789  LRKFVLVFFDDILVYSQTQSEHEEHLRLVLEVLKEQGLYANRKKCEFGSSRIEYLGHVIS 848

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFL 184
            + GV AD  K++ M++W +PK V  LRGFLGLTGYYR+FV+GYG+IA PLT LL+K+ F 
Sbjct: 849  AEGVAADEGKVRAMLDWMEPKAVKELRGFLGLTGYYRKFVQGYGDIARPLTSLLRKDQFK 908

Query: 185  WGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQIL 244
            W  EA  AF KLK AM T+PVLALPD+N  F+IE+DASG+ LGAVL Q   PIA+FSQ L
Sbjct: 909  WSGEAALAFQKLKQAMATVPVLALPDFNEQFVIESDASGVGLGAVLMQRQRPIAYFSQAL 968

Query: 245  SNRAKTKSIYERELMAVVLS----------------------------REVQPQFQKWLT 304
            + R + KS+YERELMA+V +                            RE+  ++Q+WLT
Sbjct: 969  TERQQMKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQKSLKFLLEQREINMEYQRWLT 1028

Query: 305  KLLGYDFEILYQPGLQNKAVDALSQIEQPVEMRSMSTTGIVNMVVVEKEVELDEELKAII 364
            K+LG+DF+I Y+PGL+NKA DALS+     E+ ++S    + +  V  EVE D EL  +I
Sbjct: 1029 KILGFDFDIHYKPGLENKAADALSRKSPVTELFAVSVPVSIQLEEVGSEVERDSELSKLI 1088

Query: 365  EELKKNPHESNKFQWVNGNLLYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRM 424
            +EL ++P     +  V G LL   ++VL K S LI  +L  +HDS  GGH G L+T KR+
Sbjct: 1089 QELTQDPSSHPDYTLVQGRLLRHGKLVLPKTSKLIELILKEYHDSKYGGHGGVLKTQKRI 1148

Query: 425  CGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEGWSMDFIEGLPK 468
             G  YW GM  D++KYV  C+ CQR+K     P G+LQP+P+P  + E  S+DFIEGLPK
Sbjct: 1149 GGLFYWAGMMTDIRKYVASCQTCQRHKYSTLAPGGLLQPLPVPTNVWEDISLDFIEGLPK 1208

[Close]

BLAST of CSPI07G09800 vs. NCBI nr
Match: gi|674235545|gb|KFK28310.1| (hypothetical protein AALP_AA8G499800 [Arabis alpina])

HSP 1 Score: 520.8 bits (1340), Expect = 2.6e-144
Identity = 259/486 (53.29%), Postives = 343/486 (70.58%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            VFSKLDLKSGYHQI +K  +V KTAFRTH+GHYEFLVMPFGLTNAP TFQ+LMN+VF+  
Sbjct: 701  VFSKLDLKSGYHQILVKPQNVPKTAFRTHDGHYEFLVMPFGLTNAPTTFQALMNEVFRAH 760

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
            LR  VLVFFDDILVYS+ L EH++HL +V  ++   QL ANKKKC    S I+YLGH+IS
Sbjct: 761  LRKFVLVFFDDILVYSSSLQEHQEHLRVVLQILFQQQLFANKKKCQFGSSSIEYLGHVIS 820

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFL 184
              GV AD  K++ MV+WP PK++  LRGFLGLTGYYRRFV+GYG IA PLT LL+K+ F 
Sbjct: 821  GEGVSADPSKLQAMVSWPLPKNIKALRGFLGLTGYYRRFVQGYGSIAKPLTSLLKKDKFQ 880

Query: 185  WGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQIL 244
            W EEAT AF+KLK+AM+T+PVLAL D++  F++E+DASGI LGAVL Q   P+A+FSQ L
Sbjct: 881  WSEEATVAFEKLKVAMSTVPVLALVDFSELFVVESDASGIGLGAVLLQKQKPVAYFSQAL 940

Query: 245  SNRAKTKSIYERELMAVVLS----------------------------REVQPQFQKWLT 304
            ++R K KS+YERELMA+V +                            REV  ++Q+WLT
Sbjct: 941  TDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFLVRTDQKSLKFLLEQREVNLEYQQWLT 1000

Query: 305  KLLGYDFEILYQPGLQNKAVDALSQIEQPVEMRSMSTTGIVNMVVVEKEVELDEELKAII 364
            K+LG++F+I Y+PGL+NKA DALS++E   ++ ++S    + +  + +EV+ +   K I 
Sbjct: 1001 KILGFNFDIHYKPGLENKAADALSRVEGLPQLYALSVPAAIQLEEINEEVDRNPVSKKIK 1060

Query: 365  EELKKNPHESNKFQWVNGNLLYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRM 424
            EE+  +    + +  V G LLY  ++VL KES LI  LLH FH+S +GGH G L+T + +
Sbjct: 1061 EEVLLDASTHSGYSVVQGRLLYNGKLVLPKESYLIKVLLHEFHNSRMGGHGGVLKTQRHL 1120

Query: 425  CGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEGWSMDFIEGLPK 463
                YW+GM AD+K +V EC VCQ++K     P+G+LQP+PIP ++ E  S+DF+EGLPK
Sbjct: 1121 GALFYWQGMMADIKTFVAECVVCQKHKYSTLAPSGLLQPLPIPTQVWEDISLDFVEGLPK 1180

[Close]

BLAST of CSPI07G09800 vs. NCBI nr
Match: gi|674229247|gb|KFK23032.1| (hypothetical protein AALP_AAs71112U000100, partial [Arabis alpina])

HSP 1 Score: 519.2 bits (1336), Expect = 7.4e-144
Identity = 250/491 (50.92%), Postives = 343/491 (69.86%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +FSKLDL++GYHQIR++ +DV KTAFRTH+GHYEFLVMPFGLTNAP+TFQSLMN +F+P+
Sbjct: 526  IFSKLDLRAGYHQIRVRAEDVPKTAFRTHDGHYEFLVMPFGLTNAPSTFQSLMNDLFRPY 585

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
            LR  VL+ FDDILVYS    EH+ HL  V  V+ DNQL AN KKC     ++ YLGH+IS
Sbjct: 586  LRRFVLMLFDDILVYSKSEAEHQGHLRTVLQVLTDNQLFANSKKCQFGSQKVDYLGHVIS 645

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFL 184
            + GV AD  K++ MV+WP P++V  LRGFLGLTGYYR+FVKGYGEIA PLT LL+K+ F 
Sbjct: 646  AEGVAADPAKVQAMVDWPVPRNVKALRGFLGLTGYYRKFVKGYGEIARPLTALLKKDQFQ 705

Query: 185  WGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQIL 244
            W ++  +AF  LK+AM+T+PVLAL D++LPF+IE+DASG+ LGAVL Q   PIA+FSQ  
Sbjct: 706  WSQKVEDAFQSLKVAMSTVPVLALVDFSLPFVIESDASGVGLGAVLMQQKQPIAYFSQAQ 765

Query: 245  SNRAKTKSIYERELMAVVLS----------------------------REVQPQFQKWLT 304
            + R + KS+YERELMA+V +                            RE+  ++Q+WLT
Sbjct: 766  TERQRLKSVYERELMAIVFAIQKWKHYLLGRKFLVRTDQKSLKFLLEQREINLEYQRWLT 825

Query: 305  KLLGYDFEILYQPGLQNKAVDALSQIEQPVEMRSMSTTGIVNMVVVEKEVELDEELKAII 364
            K+LG+DFEI Y+PGL+NKA DALS+I+   ++ ++S    + +  +++ +E DEEL  + 
Sbjct: 826  KILGFDFEIQYKPGLENKAADALSRIDAVPQLCALSMHVAIQLSEIDEAIEKDEELSKLK 885

Query: 365  EELKKNPHESNKFQWVNGNLLYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRM 424
            +E+  +      +  V G L  K R+VL   S L+  +L  FHD  +GGH G L+T +R+
Sbjct: 886  QEVVTDATSHPDYSVVQGRLFMKGRLVLPAASPLVKLVLQEFHDGKMGGHGGVLKTQRRV 945

Query: 425  CGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEGWSMDFIEGLPK 468
                +WKGM AD+++YV EC+VCQR+K     PAG+LQP+P+P+++ E  SMDF+EGLPK
Sbjct: 946  SEMFFWKGMLADIRQYVVECQVCQRHKYSTLAPAGLLQPLPVPKQVWEDISMDFVEGLPK 1005

[Close]

BLAST of CSPI07G09800 vs. NCBI nr
Match: gi|674248250|gb|KFK41015.1| (hypothetical protein AALP_AA2G074100 [Arabis alpina])

HSP 1 Score: 518.8 bits (1335), Expect = 9.7e-144
Identity = 258/491 (52.55%), Postives = 342/491 (69.65%), Query Frame = 1


Query: 5    VFSKLDLKSGYHQIRMKEDDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPF 64
            +FSKLDLKSGYHQI +K +DV KTAFRTH+GHYEFLVMPFGLTNAPATFQSLMN VF+ +
Sbjct: 721  IFSKLDLKSGYHQILVKAEDVAKTAFRTHDGHYEFLVMPFGLTNAPATFQSLMNDVFRGY 780

Query: 65   LRSCVLVFFDDILVYSTDLTEHEKHLGMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLIS 124
            LR  VLVFFDDILVYS  L EH++HLG V A+++ +QL AN+KKC    S+++YLGH++S
Sbjct: 781  LRKFVLVFFDDILVYSKSLQEHQQHLGQVLALLQKHQLFANQKKCDFGRSKLEYLGHVVS 840

Query: 125  SRGVEADGEKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAGPLTKLLQKNSFL 184
             +GV AD EKI+ MV+W +P++V  LRGFLGLTGYYR+FV+GYGEIA PLT LL+K+ F 
Sbjct: 841  GQGVAADPEKIQAMVSWSEPQNVKALRGFLGLTGYYRKFVQGYGEIARPLTALLKKDQFH 900

Query: 185  WGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQIL 244
            W  EAT AF +LK AM+T+PVLAL D+   F++E+DASG  LGAVL Q   P+A+FSQ L
Sbjct: 901  WTAEATMAFQQLKKAMSTVPVLALVDFTEQFVVESDASGTGLGAVLMQQQRPLAYFSQAL 960

Query: 245  SNRAKTKSIYERELMAVVLS----------------------------REVQPQFQKWLT 304
            + R + KS+YERELMA+V +                            RE+  ++QKWLT
Sbjct: 961  TERQRLKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQKSLKFLLEQREINLEYQKWLT 1020

Query: 305  KLLGYDFEILYQPGLQNKAVDALSQIEQPVEMRSMSTTGIVNMVVVEKEVELDEELKAII 364
            KLLG+DFEI Y+PGL+NKA DALS+ +  V M ++S    + +  +  EV+ D +L  + 
Sbjct: 1021 KLLGFDFEIQYKPGLENKAADALSRKDIAVHMCALSVPAAIQLAHINTEVDKDPDLHKLK 1080

Query: 365  EELKKNPHESNKFQWVNGNLLYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRM 424
            +E+  +    ++F  V G LL K ++VL   S L+  +L  FH   LGGH G L+T KR+
Sbjct: 1081 QEVLLDTAAHSEFSVVQGRLLRKGKLVLPATSLLVDVILQEFHTGKLGGHGGVLKTQKRI 1140

Query: 425  CGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEGWSMDFIEGLPK 468
                YWKGM + ++ +V  C+VCQR+K     PAG+LQP+PIPE++ E  SMDF+EGLPK
Sbjct: 1141 AEVFYWKGMMSRIRDFVAACQVCQRHKYSTLAPAGLLQPLPIPEQVWEDISMDFVEGLPK 1200

The following BLAST results are available for this feature:

BLAST of CSPI07G09800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POL2_DROME	5.6e-67	40.55	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
TF21_SCHPO	6.2e-66	31.97	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF29_SCHPO	6.2e-66	31.97	Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF26_SCHPO	6.2e-66	31.97	Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF25_SCHPO	6.2e-66	31.97	Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CSPI07G09800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A087G3S6_ARAAL	1.6e-145	51.93	Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs46225U000100 PE=4...	[more]
A0A087GEK8_ARAAL	1.8e-144	53.29	Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G499800 PE=4 SV=1	[more]
A0A087FZI0_ARAAL	5.2e-144	50.92	Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs71112U000100 PE=4...	[more]
A0A087HFW3_ARAAL	6.8e-144	52.55	Uncharacterized protein OS=Arabis alpina GN=AALP_AA2G074100 PE=4 SV=1	[more]
A0A087G291_ARAAL	3.1e-141	51.32	Uncharacterized protein OS=Arabis alpina GN=AALP_AAs48021U000700 PE=4 SV=1	[more]

BLAST of CSPI07G09800 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00860.1	1.4e-39	60.77	ATMG00860.1 DNA/RNA polymerases superfamily protein	[more]

BLAST of CSPI07G09800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|674230743\|gb\|KFK24528.1\|	2.3e-145	51.93	hypothetical protein AALP_AAs46225U000100, partial [Arabis alpina]	[more]
gi\|923614274\|ref\|XP_013745228.1\|	3.9e-145	52.95	PREDICTED: uncharacterized protein LOC106447810 [Brassica napus]	[more]
gi\|674235545\|gb\|KFK28310.1\|	2.6e-144	53.29	hypothetical protein AALP_AA8G499800 [Arabis alpina]	[more]
gi\|674229247\|gb\|KFK23032.1\|	7.4e-144	50.92	hypothetical protein AALP_AAs71112U000100, partial [Arabis alpina]	[more]
gi\|674248250\|gb\|KFK41015.1\|	9.7e-144	52.55	hypothetical protein AALP_AA2G074100 [Arabis alpina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G09800.1	CSPI07G09800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 5..121 score: 1.7
IPR000477	Reverse transcriptase domain	PROFILE	PS50878	RT_POL	coord: 1..123 score: 15
None	No IPR available	unknown	Coil	Coil	coord: 322..342 scor
None	No IPR available	GENE3D	G3DSA:3.10.10.10		coord: 6..38 score: 2.
None	No IPR available	GENE3D	G3DSA:3.30.70.270		coord: 39..124 score: 4.3
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 5..457 score: 1.1E
None	No IPR available	PANTHER	PTHR24559:SF186	SUBFAMILY NOT NAMED	coord: 5..457 score: 1.1E
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 4..287 score: 4.45E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G09800	Cucurbita moschata (Rifu)	cmocpiB030
CSPI07G09800	Cucurbita moschata (Rifu)	cmocpiB494
CSPI07G09800	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G09800	Melon (DHL92) v3.5.1	cpimeB542
CSPI07G09800	Watermelon (Charleston Gray)	cpiwcgB545
CSPI07G09800	Watermelon (97103) v1	cpiwmB573
CSPI07G09800	Cucurbita pepo (Zucchini)	cpecpiB587
CSPI07G09800	Cucurbita pepo (Zucchini)	cpecpiB797
CSPI07G09800	Bottle gourd (USVL1VR-Ls)	cpilsiB524
CSPI07G09800	Melon (DHL92) v3.6.1	cpimedB527
CSPI07G09800	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G09800	Silver-seed gourd	carcpiB0943
CSPI07G09800	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G09800	Watermelon (97103) v2	cpiwmbB588
CSPI07G09800	Wax gourd	cpiwgoB705
CSPI07G09800	Cucumber (Gy14) v1	cgycpiB128
CSPI07G09800	Cucurbita maxima (Rimu)	cmacpiB040
CSPI07G09800	Cucurbita maxima (Rimu)	cmacpiB503