CSPI07G09620 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGATATTTTCAAGCTTTGTTGGAATGGAATTTGGTGAAAAAAGAACACAAGAAGGATAAAAAGGGAAGAAGAACTTCAAAAACAAATCTTTGATGTAGGTGTCGTATCGTTGTAGGAATTTAAGAATTTCAGAGGAGAGTGGGCACGAATCACTACCCGTGGATTCTCATTCTACCCAACTCCCATGTTCCCCAGATTCAATTCCCATTTATTATTCTCCTCCTTCATCGTCCCCCTTTGTTAATCGCCATGAAAAGGTACTCTAAATTCCGATTCCTCAATTTCTCCCCACCCCCTTTTCTTTGTTTTCTTTCATTTTCGTCTCTTTTCCGAATCACTTTCGCTTTTGATTCATGTTTCTCCCATAACCCAGGTTCTGAAACTAGCTTTAAGGCTGATTTTTTTTCCGATATTTGAATCCGAGGCTTTTACAAGTCTGAATTGATTCATTCGTTCATTGATTCATTGGTTTTGTTGCCATGTCTTTCCGTAGACGGACTTTGCTCAAGGTTATCGTTCTCGGTGATAGTGGGTATGTGTAATTTATCTTCAACGGTTCCTCTGTTGCTTACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTTTTGTTGATTTTTTATATGGGTTTTCAATGATGTTTGATTTTTATTTCAGGGTTGGTAAGACGTCGTTGATGAACCAGTATCCTTCTTAAAATTGGTTGTTGACAATGATATTGATCTGTGTTTTGAGTATGTGATCTTGGAATTCACGGTTGACTTCTTTTTATTTGCCCCTTTATTAATGTCATGTCATCCGGAATTTGTATGCCTTTTGTTCCAGTTTATGTGGAATATCGTGATTCATCTTCTTCTGTTGTTTTGTTAAATTTTTGACTTGGTGAGAGGTATGAATAATTTGTTTTTTTTTTTCAACCTAAGACTGATATTCTTTTTTCCTTTATTCTTTTTGTAAAATTAGGATTTCATGTTGTTTGACCATTTTGTATGCTATTTTTTTCGTATGTCTGTAATATGTTATTTATTGAGATTTGACCCACTAGAAGTCGATGTTGAGTAATCATTGCCATTGAACTAGAATATGGATCATTGACTAGCTAATCAGATATGTGCACAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAGCTTCAAATCGACGACAGGCTTGTCACACTTCAAGTGCGTTCTACTACTTAACATCATTTACATTTCAATGCTGTGTAGACTGTTGATTTTGGAACTATTAATGTGCTCATGTTTATGCTAAATCATTGATATTTGTATTGCTAGATATGGGATACAGCCGGACAAGAAAGATTTCAAAGTCTCGGAGTTGCATTCTATAGAGGGGCAGATTGCTGCGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTTGATAATTGGCACGATGAGTTTCTCAGACAGGTAAATCAATTCAGTTCTTTGAGTTTTCAAGCTGTCTGCGATATTGTGGTTACTGTGGAGCTTGCTTATCATTACTCTATTACTCCAGATCTTTTACAGCTTGCCGAGGAAGAATTATTAGTTCATGTTGCATGATTTTCTATTTGTTATGCATGAGACTTCTCCTGTGAATGATCAAATGCCACTGGAATTTGTTCAGTCTTGTCTCGAAGTTTAGGCATGCAGTTTTTCCTTTCATGTCATTATTTGGGAAACTGTTCCTACAGTAATGGTCCAAGGGACTTTTTGGTCGTTAGGAAAGATTGCATATATAGGACTGAATGGTTCATTTATAATTTGCTTCATTTCCTTGGATTTATTTGTTTTGACTAGTTTGTGATTGTTGTTTTAGGTATTAGTTTAATTAGCTAGCTTGTGACCTTTATTCCTTTAAGCTTTGTCTAAAACACCTTCAGAGAATTTTTGTGAATTAGAATGGTACCTTAAGTTGAGGATCTACTGCCTTGGAGGTCATTTGTGCCTGGCTTGTAGATAATTGTTTTGTCCTTTGATGTAGTAGCTTTTTTCTTTGCTGGTGTTATCTGTTCTTTACCTCTGCAACGTCCCTGGCTTGTCATTTTTTCCTTCCCCTTATTGAAAAATTGCTGTTTTATCTGCATTACTCTGCTATTCTTGATTTAGTGTTTTGTGTTGCTGAGATAATCACATTGAAGTTTATGAGGATTGTGATTAAATACTACAATTGTGGACAATGATGTCTCAGAAAACAGAGTTAATCTCACAAAAGATACTGAAGGCATATTTGTGCATTAGAAAAATAAAAGAAAAATACTAGTACACCCATGCTTTCTTTGCTTTCTTCATGTGTTTAATATGTGTGCTAGTCTGAGTGTGTTTATTTGGACTAGCAGATCTTTTTCTTTTCTGAGTCTCAATTGGTTCCAATTTTTGGATGACGTCTTAATATTACTATTTTGACCTTATTTTTTTCAGGCAAACCCACCAGACCCTAGGACGTTTCCATTTATATTGCTTGGAAATAAGATCGACATTGATGGTGGGAACAGTAGAGTGGTAAGGAATAAGGATGTCTAGACCTGGCCAAATTGAATTTTGCCTTTTCTTTTCACATTGAACTGATTTTAATTTCTGTAGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCTTACTTCGAGACATCAGCTAAAGAGGACTACAACGTCGATGCTGCTTTTTTATGCATTGCCAAAACTGCATTAGCCAATGAACATGAGCAGGACATGTAAGTTTTTGAAATGTGAATTTTGTCTCATAATGTGCTCACAAGAATAATCTTTCCAGAAATTCTTTTTGAAATAGTTTTTCAAATGACCTCTTAGTGTTATGTCAGACAGACATACATGATATAGACACACTTGCATAACATACCGTTGGTAACTTGGTACTTAGGTAAACATAAGAGGGAAAAAACTTGGTTTTCAATGCCCATGAGAGATGTTGAACAATCTCCAAAACAGTTTAAAGTTTGTCTTGATAAAGTAGAGTTGATTAAATATGAAACATTCTCTCAAGGTATGATGTTTCTTATGGGGAGACAAGATAGTGTATAGCTAGTTTAGTTGGTTTTCATCTTTAGGAAACGTTCCTATTTTAAGATGTGATCGAACTTTTTTCGTTCGGTATGTGAATATATTTAAATTTCCAATTTATTTTGGGTGGTAACAAAAGAATGAGGACATTGTAATTTGTAATATGTCAAAACCCTAGTTTACCCTCTTTAGCATAGCATTTATCTTGATCCATGAACCAAAGAACGTATATTTATAGTGCCAATATGTCAGCAATTGCAAGTCTATACTGATCACAAAATTGCTAATCCTTTCAAAATTAGAAATACACGGAATCTATCCATATATATTCTGTTTCTTCAACCTTCACTGTCTCATACGAGTTTTTTTGGATAACTCGATGTTATCAGGGATGATGTTATGGGGTTAGATAGTTGTTAAATGAAATTAGTCGAAATGTGCCATTTGAATACTCTTTGTTAAGAAAATTTTCTTTGATATGGCTACTGGCATTACGTGCAAGAATCAAGATAATATACTGTATTTGCTGTAGTACTTTTTAGTCTGTTCCATCATTTATTTCCGTTTTACCAGTTGATTGTGTGTATTTTTCTTCAGAGTTCTTACATTGTTGTTTTTATTGCCACAATATCCGTGTTCATGTTTTAGCTTTGGGTAGTGTCCATCTGTTATATTTATGATGTTGCTTATCTTGTTTCCATTACAAGACACTGGACAAAACTGAAAAATACGAACTCTTACCATTGTTTTAAAATACAATTGCAGATATTTCCAAGGAATTCCTGAAACCGTCGTGGAGACTGAGCAACGAGGCGGCTGTGCATGCTGAACCCAGAAAGTGAGACTTGGGAACTATAGAACTCTCGTCCTTTTGGTTCCAATTCTTATACATTTTTGCTGGCTTTGTCATCCATAACTAATCTTTCATTTCAGACCTTCTATTCCATTACCTAACCGCCTAGACTTGAATTCATCGTCTTCCTTTTCTTGAGGTAAGAAGTTTGTGGGATGTCATGAGTCTGTAGGATCCATTATTTCAAGGATTCTCACCACCACAGTGTTCCTGAGTCAATAGTTTCTGCTTCTGCCCATCTGAATTTCTTCTTATGTTCAGGACCTTTCTTATTATGTATTTTATTATTTCTTTATTTCTTCTGGCGGCTTCCTGTTTGATTCAAACTCGTTTTTGTGGAACTGAGAAAATGGATACATTGGTTCTTTTTTCCTTTAACCCTGATTTATTGTACAATACCATTATG ATGTCTTTCCGTAGACGGACTTTGCTCAAGGTTATCGTTCTCGGTGATAGTGGGGTTGGTAAGACGTCGTTGATGAACCAATATGTGCACAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAGCTTCAAATCGACGACAGGCTTGTCACACTTCAAATATGGGATACAGCCGGACAAGAAAGATTTCAAAGTCTCGGAGTTGCATTCTATAGAGGGGCAGATTGCTGCGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTTGATAATTGGCACGATGAGTTTCTCAGACAGGCAAACCCACCAGACCCTAGGACGTTTCCATTTATATTGCTTGGAAATAAGATCGACATTGATGGTGGGAACAGTAGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCTTACTTCGAGACATCAGCTAAAGAGGACTACAACGTCGATGCTGCTTTTTTATGCATTGCCAAAACTGCATTAGCCAATGAACATGAGCAGGACATATATTTCCAAGGAATTCCTGAAACCGTCGTGGAGACTGAGCAACGAGGCGGCTGTGCATGCTGA ATGTCTTTCCGTAGACGGACTTTGCTCAAGGTTATCGTTCTCGGTGATAGTGGGGTTGGTAAGACGTCGTTGATGAACCAATATGTGCACAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAGCTTCAAATCGACGACAGGCTTGTCACACTTCAAATATGGGATACAGCCGGACAAGAAAGATTTCAAAGTCTCGGAGTTGCATTCTATAGAGGGGCAGATTGCTGCGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTTGATAATTGGCACGATGAGTTTCTCAGACAGGCAAACCCACCAGACCCTAGGACGTTTCCATTTATATTGCTTGGAAATAAGATCGACATTGATGGTGGGAACAGTAGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCTTACTTCGAGACATCAGCTAAAGAGGACTACAACGTCGATGCTGCTTTTTTATGCATTGCCAAAACTGCATTAGCCAATGAACATGAGCAGGACATATATTTCCAAGGAATTCCTGAAACCGTCGTGGAGACTGAGCAACGAGGCGGCTGTGCATGCTGA
BLAST of CSPI07G09620 vs. Swiss-Prot
Match: RAB7_SOYBN (Ras-related protein Rab7 OS=Glycine max PE=2 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 4.3e-109 Identity = 188/204 (92.16%), Postives = 196/204 (96.08%), Query Frame = 1
BLAST of CSPI07G09620 vs. Swiss-Prot
Match: RAB7_VIGAC (Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 9.7e-109 Identity = 187/204 (91.67%), Postives = 196/204 (96.08%), Query Frame = 1
BLAST of CSPI07G09620 vs. Swiss-Prot
Match: RAG3A_ARATH (Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 7.7e-98 Identity = 167/203 (82.27%), Postives = 186/203 (91.63%), Query Frame = 1
BLAST of CSPI07G09620 vs. Swiss-Prot
Match: RAG3B_ARATH (Ras-related protein RABG3b OS=Arabidopsis thaliana GN=RABG3B PE=1 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.1e-96 Identity = 170/202 (84.16%), Postives = 183/202 (90.59%), Query Frame = 1
BLAST of CSPI07G09620 vs. Swiss-Prot
Match: RAB7_GOSHI (Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 8.0e-87 Identity = 153/207 (73.91%), Postives = 176/207 (85.02%), Query Frame = 1
BLAST of CSPI07G09620 vs. TrEMBL
Match: A0A0A0K5B9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G206950 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 8.2e-115 Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 1
BLAST of CSPI07G09620 vs. TrEMBL
Match: A0A0D2QNE8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G259500 PE=4 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 2.3e-109 Identity = 192/203 (94.58%), Postives = 197/203 (97.04%), Query Frame = 1
BLAST of CSPI07G09620 vs. TrEMBL
Match: M5W8B5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011579mg PE=4 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 2.3e-109 Identity = 189/203 (93.10%), Postives = 199/203 (98.03%), Query Frame = 1
BLAST of CSPI07G09620 vs. TrEMBL
Match: A0A068TXU8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034663001 PE=4 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 2.3e-109 Identity = 190/203 (93.60%), Postives = 197/203 (97.04%), Query Frame = 1
BLAST of CSPI07G09620 vs. TrEMBL
Match: A0A067KM05_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10014 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 1.1e-108 Identity = 188/203 (92.61%), Postives = 198/203 (97.54%), Query Frame = 1
BLAST of CSPI07G09620 vs. TAIR10
Match: AT1G22740.1 (AT1G22740.1 RAB GTPase homolog G3B) HSP 1 Score: 354.0 bits (907), Expect = 6.2e-98 Identity = 170/202 (84.16%), Postives = 183/202 (90.59%), Query Frame = 1
BLAST of CSPI07G09620 vs. TAIR10
Match: AT4G09720.3 (AT4G09720.3 RAB GTPase homolog G3A) HSP 1 Score: 349.4 bits (895), Expect = 1.5e-96 Identity = 167/214 (78.04%), Postives = 186/214 (86.92%), Query Frame = 1
BLAST of CSPI07G09620 vs. TAIR10
Match: AT1G52280.1 (AT1G52280.1 RAB GTPase homolog G3D) HSP 1 Score: 315.1 bits (806), Expect = 3.2e-86 Identity = 149/203 (73.40%), Postives = 169/203 (83.25%), Query Frame = 1
BLAST of CSPI07G09620 vs. TAIR10
Match: AT2G21880.1 (AT2G21880.1 RAB GTPase homolog 7A) HSP 1 Score: 315.1 bits (806), Expect = 3.2e-86 Identity = 151/209 (72.25%), Postives = 175/209 (83.73%), Query Frame = 1
BLAST of CSPI07G09620 vs. TAIR10
Match: AT3G16100.1 (AT3G16100.1 RAB GTPase homolog G3C) HSP 1 Score: 312.4 bits (799), Expect = 2.1e-85 Identity = 147/203 (72.41%), Postives = 170/203 (83.74%), Query Frame = 1
BLAST of CSPI07G09620 vs. NCBI nr
Match: gi|659093867|ref|XP_008447760.1| (PREDICTED: ras-related protein Rab7 isoform X2 [Cucumis melo]) HSP 1 Score: 424.1 bits (1089), Expect = 1.4e-115 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1
BLAST of CSPI07G09620 vs. NCBI nr
Match: gi|449444034|ref|XP_004139780.1| (PREDICTED: ras-related protein Rab7 isoform X1 [Cucumis sativus]) HSP 1 Score: 421.0 bits (1081), Expect = 1.2e-114 Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 1
BLAST of CSPI07G09620 vs. NCBI nr
Match: gi|823228782|ref|XP_012447136.1| (PREDICTED: ras-related protein Rab7 [Gossypium raimondii]) HSP 1 Score: 402.9 bits (1034), Expect = 3.3e-109 Identity = 192/203 (94.58%), Postives = 197/203 (97.04%), Query Frame = 1
BLAST of CSPI07G09620 vs. NCBI nr
Match: gi|661895330|emb|CDP01135.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 402.9 bits (1034), Expect = 3.3e-109 Identity = 190/203 (93.60%), Postives = 197/203 (97.04%), Query Frame = 1
BLAST of CSPI07G09620 vs. NCBI nr
Match: gi|595801623|ref|XP_007201851.1| (hypothetical protein PRUPE_ppa011579mg [Prunus persica]) HSP 1 Score: 402.9 bits (1034), Expect = 3.3e-109 Identity = 189/203 (93.10%), Postives = 199/203 (98.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |