CSPI07G09440 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G09440
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 7454288 .. 7454545 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTGAGCATTTTGAACGGATGGGCCAGGGTTTCCAAAAGATTGACTTCGCGCGCGGAAGCAGACGGTTGGAGTTGTGGACGGACGGCGGCAGAGGGTTTCGGTGTGTGTGGGGGGGTTTCGAATGGGTTTTTTCGAATGGAGGTGAGCGTTTCGAACAGATGGGCCGGGGTTTCCAAAAGACTGACTTCGCACGCGGGGGTTCCTTTGGGGTGGGTAGATGTCGTTGACAACAATGGAAGCAAGCGGTCGTAG

mRNA sequence

ATGGAGGTGAGCATTTTGAACGGATGGGCCAGGGTTTCCAAAAGATTGACTTCGCGCGCGGAAGCAGACGGTTGGAGTTGTGGACGGACGGCGGCAGAGGGTTTCGGTGTGTGTGGGGGGGTTTCGAATGGGTTTTTTCGAATGGAGGTGAGCGTTTCGAACAGATGGGCCGGGGTTTCCAAAAGACTGACTTCGCACGCGGGGGTTCCTTTGGGGTGGGTAGATGTCGTTGACAACAATGGAAGCAAGCGGTCGTAG

Coding sequence (CDS)

ATGGAGGTGAGCATTTTGAACGGATGGGCCAGGGTTTCCAAAAGATTGACTTCGCGCGCGGAAGCAGACGGTTGGAGTTGTGGACGGACGGCGGCAGAGGGTTTCGGTGTGTGTGGGGGGGTTTCGAATGGGTTTTTTCGAATGGAGGTGAGCGTTTCGAACAGATGGGCCGGGGTTTCCAAAAGACTGACTTCGCACGCGGGGGTTCCTTTGGGGTGGGTAGATGTCGTTGACAACAATGGAAGCAAGCGGTCGTAG
Homology
[Close]
BLAST of CSPI07G09440 vs. TrEMBL
Match: A0A0A0KFH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G193630 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 6.1e-11
Identity = 49/102 (48.04%), Postives = 52/102 (50.98%), Query Frame = 1 

Query: 1   MEVSILNGWARVSKRLTSRAEAD-GWS------------CGRTAAEGF------------ 60
           MEVS+LNGWA VSKRLTSRA    GW+               +   GF            
Sbjct: 1   MEVSVLNGWAEVSKRLTSRAARPLGWADVVDDNGSKRSELWTSGGRGFRRRQRQWKQAVG 60

Query: 61  ---------GVCGGVSNGFFRMEVSVSNRWAGVSKRLTSHAG 69
                     VC GVSNGFFRMEVSVSN W  VSKRLTS AG
Sbjct: 61  VVDGRRQRVSVCVGVSNGFFRMEVSVSNEWVRVSKRLTSRAG 102

[Close]
BLAST of CSPI07G09440 vs. NCBI nr
Match: gi|700191973|gb|KGN47177.1| (hypothetical protein Csa_6G193630 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 8.7e-11
Identity = 49/102 (48.04%), Postives = 52/102 (50.98%), Query Frame = 1 

Query: 1   MEVSILNGWARVSKRLTSRAEAD-GWS------------CGRTAAEGF------------ 60
           MEVS+LNGWA VSKRLTSRA    GW+               +   GF            
Sbjct: 1   MEVSVLNGWAEVSKRLTSRAARPLGWADVVDDNGSKRSELWTSGGRGFRRRQRQWKQAVG 60

Query: 61  ---------GVCGGVSNGFFRMEVSVSNRWAGVSKRLTSHAG 69
                     VC GVSNGFFRMEVSVSN W  VSKRLTS AG
Sbjct: 61  VVDGRRQRVSVCVGVSNGFFRMEVSVSNEWVRVSKRLTSRAG 102

The following BLAST results are available for this feature:
BLAST of CSPI07G09440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G09440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFH7_CUCSA6.1e-1148.04Uncharacterized protein OS=Cucumis sativus GN=Csa_6G193630 PE=4 SV=1[more]
BLAST of CSPI07G09440 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G09440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191973|gb|KGN47177.1|8.7e-1148.04hypothetical protein Csa_6G193630 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G09440.1CSPI07G09440.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G09440Cucumber (Chinese Long) v3cpicucB414
CSPI07G09440Watermelon (97103) v2cpiwmbB599
CSPI07G09440Wax gourdcpiwgoB722
CSPI07G09440Cucurbita maxima (Rimu)cmacpiB046
CSPI07G09440Cucurbita maxima (Rimu)cmacpiB495
CSPI07G09440Cucurbita moschata (Rifu)cmocpiB036
CSPI07G09440Cucurbita moschata (Rifu)cmocpiB485
CSPI07G09440Cucumber (Chinese Long) v2cpicuB354
CSPI07G09440Melon (DHL92) v3.5.1cpimeB542
CSPI07G09440Watermelon (Charleston Gray)cpiwcgB556
CSPI07G09440Watermelon (97103) v1cpiwmB588
CSPI07G09440Cucurbita pepo (Zucchini)cpecpiB594
CSPI07G09440Cucurbita pepo (Zucchini)cpecpiB802
CSPI07G09440Bottle gourd (USVL1VR-Ls)cpilsiB518
CSPI07G09440Melon (DHL92) v3.6.1cpimedB527
CSPI07G09440Cucumber (Gy14) v2cgybcpiB331
CSPI07G09440Silver-seed gourdcarcpiB0088
CSPI07G09440Silver-seed gourdcarcpiB0469