CSPI07G09400 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G09400
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr7 : 7415624 .. 7416166 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGCTAGACGAACAATTTCAAGTTGCAGTTATTATTGATAAATTACCTCCCCTGTGGAAAGAATTCAAGAACGCTCTAAGGCGCAAAACCAAGGAGTTCTCGTTGGAAAGCCTTATCACGAGACTAAGGATAGGGGAGGAGGCAAGAAAACATGATCAAAAGGAGGAGGTAAATGCGATTCCCAAAAAGAAGTCTATTGCAGTTCTGAAATCGAAAGGAAACAAGATGAAATGTGGATCCAATAAACAGAACAACCCTCTATCTAGAAGTATGGTACAAATTGTTTGTTATAACTGTAATAAGTCTGGACACTGAGCTAGGAATTGTAGAAATAGGAATCGTCGTGTTGTGCAGGCAAACCTGGTAGAAGATGAATTTGTAGCTATGATTTTTGAAGTTAATGTCATTAGGGGGTCTGAAGGTTGGTGGCTAGACATTGGTGCATCCCGCCATGTTGTCATGACCTTAGTCTGTTCAGAAAATATAATGAAGTTAAGAATAAGAATATCCTTCTGGGAGATTATCATACAACCAAGATAG

mRNA sequence

ATGACGCTAGACGAACAATTTCAAGTTGCAGTTATTATTGATAAATTACCTCCCCTGTGGAAAGAATTCAAGAACGCTCTAAGGCGCAAAACCAAGGAGTTCTCGTTGGAAAGCCTTATCACGAGACTAAGGATAGGGGAGGAGGCAAGAAAACATGATCAAAAGGAGGAGGTAAATGCGATTCCCAAAAAGAAGTCTATTGCAGTTCTGAAATCGAAAGGAAACAAGATGAAATGTGGATCCAATAAACAGAACAACCCTCTATCTAGAAGTATGGCAAACCTGGTAGAAGATGAATTTGTAGCTATGATTTTTGAAGTTAATGTCATTAGGGGGTCTGAAGGTTGGTGGCTAGACATTGGTGCATCCCGCCATGTTGTCATGACCTTAGTCTGTTCAGAAAATATAATGAAGTTAAGAATAAGAATATCCTTCTGGGAGATTATCATACAACCAAGATAG

Coding sequence (CDS)

ATGACGCTAGACGAACAATTTCAAGTTGCAGTTATTATTGATAAATTACCTCCCCTGTGGAAAGAATTCAAGAACGCTCTAAGGCGCAAAACCAAGGAGTTCTCGTTGGAAAGCCTTATCACGAGACTAAGGATAGGGGAGGAGGCAAGAAAACATGATCAAAAGGAGGAGGTAAATGCGATTCCCAAAAAGAAGTCTATTGCAGTTCTGAAATCGAAAGGAAACAAGATGAAATGTGGATCCAATAAACAGAACAACCCTCTATCTAGAAGTATGGCAAACCTGGTAGAAGATGAATTTGTAGCTATGATTTTTGAAGTTAATGTCATTAGGGGGTCTGAAGGTTGGTGGCTAGACATTGGTGCATCCCGCCATGTTGTCATGACCTTAGTCTGTTCAGAAAATATAATGAAGTTAAGAATAAGAATATCCTTCTGGGAGATTATCATACAACCAAGATAG

Homology

[Close]

BLAST of CSPI07G09400 vs. TrEMBL
Match: M5W680_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb014392mg PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.4e-18
Identity = 58/103 (56.31%), Postives = 65/103 (63.11%), Query Frame = 1


Query: 1   MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNA 60
           M LDEQFQVA+II KLPP WK+FKNALR KTKEFSLESLITRL I EEARKHD KEEV  
Sbjct: 91  MNLDEQFQVAIIIHKLPPSWKDFKNALRHKTKEFSLESLITRLHIEEEARKHDMKEEVLL 150

Query: 61  IP---------KKKSIAVLKSKGNKMKCGSNKQNNPLSRSMAN 95
           I          + ++ A LK+ G  MK  +          M N
Sbjct: 151 ISNNNKNHNSNRNQTTAALKTNGKNMKIKTGTATTTTRIEMVN 193

[Close]

BLAST of CSPI07G09400 vs. TrEMBL
Match: M5X570_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb012171mg PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-15
Identity = 57/99 (57.58%), Postives = 64/99 (64.65%), Query Frame = 1


Query: 1   MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNA 60
           M LDEQFQVAVIIDKLPP WK+FKNAL     +FSLESLITRLRI EEARKHD KEEV  
Sbjct: 150 MNLDEQFQVAVIIDKLPPNWKDFKNAL-----QFSLESLITRLRIEEEARKHDMKEEVLL 209

Query: 61  I---------PKKKSIAVLKSKGNKMK-----CGSNKQN 86
           +          K ++ A LK+    MK     C +N QN
Sbjct: 210 VSNNKKNHNSTKNQTPAALKTNAKNMKNQNRNCNNNDQN 243

[Close]

BLAST of CSPI07G09400 vs. TrEMBL
Match: A5CBN2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016964 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.1e-14
Identity = 50/133 (37.59%), Postives = 75/133 (56.39%), Query Frame = 1


Query: 1   MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNA 60
           M+  + FQVA +I+KLPPLWK+FKN L+ K KE +LE LI RLRI E+ RK ++K   N+
Sbjct: 347 MSFSDSFQVAAVIEKLPPLWKDFKNYLKHKRKEMNLEELIVRLRIEEDNRKSEKKGN-NS 406

Query: 61  IPKKKSIAVLKSKGNKMKCGSNKQNNPLSRSMANLVEDEFVAMIF-------EVNVIRGS 120
           +  K ++     K NK +   ++  N  S      V  +F    +       + N  R +
Sbjct: 407 MEAKANVIEQGPKTNKKRKHGDQNQNQESN-----VAKKFKGKCYNCGKTGHKSNDYRNT 466

Query: 121 EGWWLDIGASRHV 127
           + WW+D GA+RH+
Sbjct: 467 KEWWVDTGATRHI 473

[Close]

BLAST of CSPI07G09400 vs. TrEMBL
Match: Q6L408_SOLDE (Polyprotein, putative OS=Solanum demissum GN=SDM1_44t00009 PE=4 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 6.8e-13
Identity = 47/135 (34.81%), Postives = 76/135 (56.30%), Query Frame = 1


Query: 1   MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNA 60
           M ++E FQVA +I+KLPP W +FKN L+ K KE  LE L+ RL+I E+ +  ++K     
Sbjct: 252 MVVNEAFQVAAMIEKLPPSWNDFKNYLKHKRKEMKLEDLVIRLKIEEDNKTAEKK----- 311

Query: 61  IPKKKSIAVLKSKGNKMKCGSNKQNNP----LSRSMANLVE-----DEFVAMIFEVNVIR 120
              +KS  ++ +      C + +++        +S AN+VE     D+   MI E N++ 
Sbjct: 312 --SRKSSTIIGAGHKSSDCRAPRKDKDKDKGKGKSQANIVEEMEDADDLCGMISECNLVG 371

Query: 121 GSEGWWLDIGASRHV 127
             + W+LD GA+RH+
Sbjct: 372 NPKEWFLDSGATRHI 379

[Close]

BLAST of CSPI07G09400 vs. TrEMBL
Match: A5AEN5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011340 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-11
Identity = 58/181 (32.04%), Postives = 86/181 (47.51%), Query Frame = 1


Query: 1   MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEE------------ 60
           M L E FQVA II+KLPP WK+FKN L+ K KE S+E LI RLRI E+            
Sbjct: 177 MMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTL 236

Query: 61  ---------------ARKHDQKEEVNAIPKKKSIAVL-KSKGNKMKCGSN---------- 120
                          A+ ++ K + + +  K  I+   K +G    CG            
Sbjct: 237 NEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 296

Query: 121 KQNNPLSRSMA-----NLVEDEFVAMIFEVNVIRGS-EGWWLDIGASRHVVMTLVCSENI 138
           K+N P   ++      N+ + +  A++ EVN++  + + WW+D GA+RH     VCS+  
Sbjct: 297 KKNKPKEANVIDDITKNVYDIDLTAVVSEVNLVGSNPKEWWIDTGATRH-----VCSDKK 352

[Close]

BLAST of CSPI07G09400 vs. NCBI nr
Match: gi|571447932|ref|XP_006577615.1| (PREDICTED: uncharacterized protein LOC102665777 [Glycine max])

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 1


Query: 1   MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNA 60
           M LDEQFQVAVIIDKLPP WK+FKN LR KTKEFSLESLITRLRI EEAR+ DQK+EV  
Sbjct: 119 MALDEQFQVAVIIDKLPPGWKDFKNLLRHKTKEFSLESLITRLRIEEEARRQDQKDEVLT 178

Query: 61  IPKKKSIAVLKSKGNKMKCGSNKQNNPLSRSMANLVEDEFVAMIFEVNVIRGSEGWWLDI 120
           +                       NN ++       ++ ++A+I E+N+I GS+GWW+D 
Sbjct: 179 V---------------------SHNNTMT-------QEPYIAVITEINMIGGSDGWWVDT 216

Query: 121 GASRHV 127
           GASRHV
Sbjct: 239 GASRHV 216

[Close]

BLAST of CSPI07G09400 vs. NCBI nr
Match: gi|955391754|ref|XP_014627888.1| (PREDICTED: uncharacterized protein LOC106797581 [Glycine max])

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-19
Identity = 63/99 (63.64%), Postives = 70/99 (70.71%), Query Frame = 1


Query: 1   MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEV-- 60
           MTLDEQFQVAVIIDKLPP WK+FKN LR KTKEFSLESLITRLRI EEAR+ DQK+EV  
Sbjct: 119 MTLDEQFQVAVIIDKLPPSWKDFKNLLRHKTKEFSLESLITRLRIEEEARRQDQKDEVLV 178

Query: 61  ---NAIPKKKSIAVLKSKGNKMKCGSNKQNNPLSRSMAN 95
              N I +K + AVLK  G   K   N+  N  + S  N
Sbjct: 179 VSHNNIKRKNTGAVLKPIGKNFK---NQNRNVSNTSNCN 214

[Close]

BLAST of CSPI07G09400 vs. NCBI nr
Match: gi|595813291|ref|XP_007203559.1| (hypothetical protein PRUPE_ppb014392mg [Prunus persica])

HSP 1 Score: 100.1 bits (248), Expect = 3.5e-18
Identity = 58/103 (56.31%), Postives = 65/103 (63.11%), Query Frame = 1


Query: 1   MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNA 60
           M LDEQFQVA+II KLPP WK+FKNALR KTKEFSLESLITRL I EEARKHD KEEV  
Sbjct: 91  MNLDEQFQVAIIIHKLPPSWKDFKNALRHKTKEFSLESLITRLHIEEEARKHDMKEEVLL 150

Query: 61  IP---------KKKSIAVLKSKGNKMKCGSNKQNNPLSRSMAN 95
           I          + ++ A LK+ G  MK  +          M N
Sbjct: 151 ISNNNKNHNSNRNQTTAALKTNGKNMKIKTGTATTTTRIEMVN 193

[Close]

BLAST of CSPI07G09400 vs. NCBI nr
Match: gi|955304629|ref|XP_014634108.1| (PREDICTED: uncharacterized protein LOC106799690 [Glycine max])

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-17
Identity = 50/58 (86.21%), Postives = 53/58 (91.38%), Query Frame = 1


Query: 1   MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEV 59
           MTLDEQFQVAVIIDKLPP WK+FKN LR KTKEFSLESLITRLRI EEAR+ DQK+EV
Sbjct: 156 MTLDEQFQVAVIIDKLPPGWKDFKNNLRHKTKEFSLESLITRLRIEEEARRQDQKDEV 213

[Close]

BLAST of CSPI07G09400 vs. NCBI nr
Match: gi|955343485|ref|XP_014618094.1| (PREDICTED: uncharacterized protein LOC106794728 [Glycine max])

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-17
Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1


Query: 1   MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEV-- 60
           M LDEQFQVAVIIDKLPP WK+FKN LR KTKEFSL+SLITRLRI EEAR+ DQK+EV  
Sbjct: 93  MALDEQFQVAVIIDKLPPGWKDFKNLLRHKTKEFSLDSLITRLRIEEEARRQDQKDEVLV 152

Query: 61  ---NAIPKKKSIAVLKSKGNKMKCGSNKQNNPLSRS 92
              N   +K +  VLK  G   K  +   +N  +R+
Sbjct: 153 VSHNNTKRKNTGVVLKPIGKNFKNQNRNVSNTSNRN 188

The following BLAST results are available for this feature:

BLAST of CSPI07G09400 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G09400 vs. TrEMBL


Match Name	E-value	Identity	Description
M5W680_PRUPE	2.4e-18	56.31	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb014392mg PE=4 SV=1	[more]
M5X570_PRUPE	1.1e-15	57.58	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb012171mg PE=4 SV=1	[more]
A5CBN2_VITVI	8.1e-14	37.59	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016964 PE=4 SV=1	[more]
Q6L408_SOLDE	6.8e-13	34.81	Polyprotein, putative OS=Solanum demissum GN=SDM1_44t00009 PE=4 SV=2	[more]
A5AEN5_VITVI	1.7e-11	32.04	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011340 PE=4 SV=1	[more]

BLAST of CSPI07G09400 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI07G09400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|571447932\|ref\|XP_006577615.1\|	3.5e-26	53.97	PREDICTED: uncharacterized protein LOC102665777 [Glycine max]	[more]
gi\|955391754\|ref\|XP_014627888.1\|	1.4e-19	63.64	PREDICTED: uncharacterized protein LOC106797581 [Glycine max]	[more]
gi\|595813291\|ref\|XP_007203559.1\|	3.5e-18	56.31	hypothetical protein PRUPE_ppb014392mg [Prunus persica]	[more]
gi\|955304629\|ref\|XP_014634108.1\|	1.0e-17	86.21	PREDICTED: uncharacterized protein LOC106799690 [Glycine max]	[more]
gi\|955343485\|ref\|XP_014618094.1\|	1.0e-17	59.38	PREDICTED: uncharacterized protein LOC106794728 [Glycine max]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G09400.1	CSPI07G09400.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G09400	Wax gourd	cpiwgoB722
CSPI07G09400	Cucurbita maxima (Rimu)	cmacpiB046
CSPI07G09400	Cucurbita maxima (Rimu)	cmacpiB495
CSPI07G09400	Cucurbita moschata (Rifu)	cmocpiB036
CSPI07G09400	Cucurbita moschata (Rifu)	cmocpiB485
CSPI07G09400	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G09400	Melon (DHL92) v3.5.1	cpimeB542
CSPI07G09400	Watermelon (Charleston Gray)	cpiwcgB556
CSPI07G09400	Watermelon (97103) v1	cpiwmB588
CSPI07G09400	Cucurbita pepo (Zucchini)	cpecpiB594
CSPI07G09400	Cucurbita pepo (Zucchini)	cpecpiB802
CSPI07G09400	Bottle gourd (USVL1VR-Ls)	cpilsiB518
CSPI07G09400	Melon (DHL92) v3.6.1	cpimedB527
CSPI07G09400	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G09400	Silver-seed gourd	carcpiB0088
CSPI07G09400	Silver-seed gourd	carcpiB0469
CSPI07G09400	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G09400	Watermelon (97103) v2	cpiwmbB599