CSPI07G08700 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G08700
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr7 : 6542536 .. 6543183 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGTTACAACGCTCACAACTCTGGATACACTTCTTCTCCCTCATCACCATCACAAGGTACATATTTAGAAGAATTAATCTCAGGAATTGCTTATAGCTTAGATAGTTTTGAAACTGATTTTGAGAAGAATTTAGCTAAGTTGAGTGAATACACTGTTAGTTTAACTGGAAGCATGAGAAATGACTTAGCTAAGTTGAATGAACAAACCCTTAGTCCAACTAGAGCCGTGAATAATGACTTAGAAACCATGAAAGCATCCATATCTGAGATTGAAAATAAGCTCGATCAATTAGCAACAAACATTCATGAAACAGAAGAAAATGATGAACTTTTTGCCCATGCATATGAGAACGATGTTACTTTAGAAAGTAGAAAAATTTTCAATGATAAAGATGACGTAAACCCTTCTAGTGATCATGTTTCATTAAGTGCATTTGATACCTTAGAATCATTAGAGACACTAGAAAAGCATGGTAATTTCAATGAGATTGTTGATCAAGCAACTTTAGAACATGTTGAAATTGAAGCTGCTAAGAACGACCCTAGTGACGATGATCTCTCTATCTTCCTTGGCTTTGTTACTAGTATAAATGATGAGCATGCTTTGGTGATAATGTTGAAACACATGAACAACATGCTTTAG

mRNA sequence

ATGGGAGGTTACAACGCTCACAACTCTGGATACACTTCTTCTCCCTCATCACCATCACAAGGTACATATTTAGAAGAATTAATCTCAGGAATTGCTTATAGCTTAGATAGTTTTGAAACTGATTTTGAGAAGAATTTAGCTAAGTTGAGTGAATACACTGTTAGTTTAACTGGAAGCATGAGAAATGACTTAGCTAAGTTGAATGAACAAACCCTTAGTCCAACTAGAGCCGTGAATAATGACTTAGAAACCATGAAAGCATCCATATCTGAGATTGAAAATAAGCTCGATCAATTAGCAACAAACATTCATGAAACAGAAGAAAATGATGAACTTTTTGCCCATGCATATGAGAACGATGTTACTTTAGAAAGTAGAAAAATTTTCAATGATAAAGATGACGTAAACCCTTCTAGTGATCATGTTTCATTAAGTGCATTTGATACCTTAGAATCATTAGAGACACTAGAAAAGCATGGTAATTTCAATGAGATTGTTGATCAAGCAACTTTAGAACATGTTGAAATTGAAGCTGCTAAGAACGACCCTAGTGACGATGATCTCTCTATCTTCCTTGGCTTTGTTACTAGTATAAATGATGAGCATGCTTTGGTGATAATGTTGAAACACATGAACAACATGCTTTAG

Coding sequence (CDS)

ATGGGAGGTTACAACGCTCACAACTCTGGATACACTTCTTCTCCCTCATCACCATCACAAGGTACATATTTAGAAGAATTAATCTCAGGAATTGCTTATAGCTTAGATAGTTTTGAAACTGATTTTGAGAAGAATTTAGCTAAGTTGAGTGAATACACTGTTAGTTTAACTGGAAGCATGAGAAATGACTTAGCTAAGTTGAATGAACAAACCCTTAGTCCAACTAGAGCCGTGAATAATGACTTAGAAACCATGAAAGCATCCATATCTGAGATTGAAAATAAGCTCGATCAATTAGCAACAAACATTCATGAAACAGAAGAAAATGATGAACTTTTTGCCCATGCATATGAGAACGATGTTACTTTAGAAAGTAGAAAAATTTTCAATGATAAAGATGACGTAAACCCTTCTAGTGATCATGTTTCATTAAGTGCATTTGATACCTTAGAATCATTAGAGACACTAGAAAAGCATGGTAATTTCAATGAGATTGTTGATCAAGCAACTTTAGAACATGTTGAAATTGAAGCTGCTAAGAACGACCCTAGTGACGATGATCTCTCTATCTTCCTTGGCTTTGTTACTAGTATAAATGATGAGCATGCTTTGGTGATAATGTTGAAACACATGAACAACATGCTTTAG

Homology

[Close]

BLAST of CSPI07G08700 vs. TrEMBL
Match: A0A0A0K703_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G157510 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.8e-112
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 1   MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSM 60
           MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSM
Sbjct: 1   MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSM 60

Query: 61  RNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEENDELFAHAYEND 120
           RNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEENDELFAHAYEND
Sbjct: 61  RNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEENDELFAHAYEND 120

Query: 121 VTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAK 180
           VTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAK
Sbjct: 121 VTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAK 180

Query: 181 NDPSDDDLSIFLGFVTSINDEHALVIMLKHMNNML 216
           NDPSDDDLSIFLGFVTSINDEHALVIMLKHMNNML
Sbjct: 181 NDPSDDDLSIFLGFVTSINDEHALVIMLKHMNNML 215

[Close]

BLAST of CSPI07G08700 vs. TrEMBL
Match: A0A0A0KCG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G224020 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-33
Identity = 86/121 (71.07%), Postives = 90/121 (74.38%), Query Frame = 1


Query: 85  MKASISEIENKLDQLATNIHETEENDELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSL 144
           MKAS  EI NKLDQL T+I E E NDEL +HAY NDVTLESRKIFNDKDDVNPSSDHVSL
Sbjct: 1   MKASTFEIGNKLDQLETHILEMEGNDELPSHAYVNDVTLESRKIFNDKDDVNPSSDHVSL 60

Query: 145 SAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHAL 204
           SAF TLESLETLEKHGNFNEI                    DDLSIFL F+TSIN+EHAL
Sbjct: 61  SAFHTLESLETLEKHGNFNEI--------------------DDLSIFLDFITSINEEHAL 101

Query: 205 V 206
           V
Sbjct: 121 V 101

[Close]

BLAST of CSPI07G08700 vs. TrEMBL
Match: A0A0A0KEQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G295940 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.4e-16
Identity = 67/153 (43.79%), Postives = 86/153 (56.21%), Query Frame = 1


Query: 1   MGGY-------NAHNSGYTSSPS----------------SPSQGTYLEELISGIAYSLDS 60
           +GGY       NA+NSG+   PS                S S+GTYLEE++S +A+S ++
Sbjct: 58  LGGYRRNDSQSNAYNSGWRDDPSLRWGPQEPKHNNTPSTSSSKGTYLEEIVSKLAFSSNN 117

Query: 61  FETDFEKNLAKLSEYTVSLTGSMRNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLD 120
           F++DFEKNLAKLSEYTVS TG                  A+ ND+E MKASISE+ NKLD
Sbjct: 118 FKSDFEKNLAKLSEYTVSSTG------------------AIKNDVENMKASISELGNKLD 177

Query: 121 QLATNIHETEENDELFA---HAYENDVTLESRK 128
           QLA    +TE   +L A   HA  + +TL S K
Sbjct: 178 QLAIQFLKTEGKGKLPAQPNHANVSAITLRSEK 192

[Close]

BLAST of CSPI07G08700 vs. TrEMBL
Match: A0A0A0KY93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G151750 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.4e-08
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 1


Query: 152 SLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV 206
           ++ET E H  FNE+++Q TLE+ + + AK  PSD+DLSIFL FVTSINDEH LV
Sbjct: 11  TIETFE-HDKFNELIEQETLEYFDNKFAKEKPSDNDLSIFLDFVTSINDEHVLV 63

[Close]

BLAST of CSPI07G08700 vs. NCBI nr
Match: gi|700188829|gb|KGN44062.1| (hypothetical protein Csa_7G157510 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 2.6e-112
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 1   MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSM 60
           MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSM
Sbjct: 1   MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSM 60

Query: 61  RNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEENDELFAHAYEND 120
           RNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEENDELFAHAYEND
Sbjct: 61  RNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEENDELFAHAYEND 120

Query: 121 VTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAK 180
           VTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAK
Sbjct: 121 VTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAK 180

Query: 181 NDPSDDDLSIFLGFVTSINDEHALVIMLKHMNNML 216
           NDPSDDDLSIFLGFVTSINDEHALVIMLKHMNNML
Sbjct: 181 NDPSDDDLSIFLGFVTSINDEHALVIMLKHMNNML 215

[Close]

BLAST of CSPI07G08700 vs. NCBI nr
Match: gi|700192034|gb|KGN47238.1| (hypothetical protein Csa_6G224020 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 4.1e-33
Identity = 86/121 (71.07%), Postives = 90/121 (74.38%), Query Frame = 1


Query: 85  MKASISEIENKLDQLATNIHETEENDELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSL 144
           MKAS  EI NKLDQL T+I E E NDEL +HAY NDVTLESRKIFNDKDDVNPSSDHVSL
Sbjct: 1   MKASTFEIGNKLDQLETHILEMEGNDELPSHAYVNDVTLESRKIFNDKDDVNPSSDHVSL 60

Query: 145 SAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHAL 204
           SAF TLESLETLEKHGNFNEI                    DDLSIFL F+TSIN+EHAL
Sbjct: 61  SAFHTLESLETLEKHGNFNEI--------------------DDLSIFLDFITSINEEHAL 101

Query: 205 V 206
           V
Sbjct: 121 V 101

[Close]

BLAST of CSPI07G08700 vs. NCBI nr
Match: gi|659072254|ref|XP_008464440.1| (PREDICTED: uncharacterized protein LOC103502324 [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 3.4e-19
Identity = 57/88 (64.77%), Postives = 65/88 (73.86%), Query Frame = 1


Query: 118 ENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIE 177
           E D  +ES   FN  DDVN S+DHVSL A DTLESL+T E+H  FNE++DQ TLE+VE E
Sbjct: 298 EFDGDIES---FNSFDDVNSSNDHVSLCALDTLESLKTQEEHDKFNELIDQTTLEYVENE 357

Query: 178 AAKNDPSDDDLSIFLGFVTSINDEHALV 206
            AKN  SDDD SIFL F  S+NDEHALV
Sbjct: 358 FAKNKLSDDDFSIFLDFFASVNDEHALV 382

[Close]

BLAST of CSPI07G08700 vs. NCBI nr
Match: gi|700192115|gb|KGN47319.1| (hypothetical protein Csa_6G295940 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 3.5e-16
Identity = 67/153 (43.79%), Postives = 86/153 (56.21%), Query Frame = 1


Query: 1   MGGY-------NAHNSGYTSSPS----------------SPSQGTYLEELISGIAYSLDS 60
           +GGY       NA+NSG+   PS                S S+GTYLEE++S +A+S ++
Sbjct: 58  LGGYRRNDSQSNAYNSGWRDDPSLRWGPQEPKHNNTPSTSSSKGTYLEEIVSKLAFSSNN 117

Query: 61  FETDFEKNLAKLSEYTVSLTGSMRNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLD 120
           F++DFEKNLAKLSEYTVS TG                  A+ ND+E MKASISE+ NKLD
Sbjct: 118 FKSDFEKNLAKLSEYTVSSTG------------------AIKNDVENMKASISELGNKLD 177

Query: 121 QLATNIHETEENDELFA---HAYENDVTLESRK 128
           QLA    +TE   +L A   HA  + +TL S K
Sbjct: 178 QLAIQFLKTEGKGKLPAQPNHANVSAITLRSEK 192

[Close]

BLAST of CSPI07G08700 vs. NCBI nr
Match: gi|700198661|gb|KGN53819.1| (hypothetical protein Csa_4G151750 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 7.8e-08
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 1


Query: 152 SLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV 206
           ++ET E H  FNE+++Q TLE+ + + AK  PSD+DLSIFL FVTSINDEH LV
Sbjct: 11  TIETFE-HDKFNELIEQETLEYFDNKFAKEKPSDNDLSIFLDFVTSINDEHVLV 63

The following BLAST results are available for this feature:

BLAST of CSPI07G08700 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G08700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K703_CUCSA	1.8e-112	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G157510 PE=4 SV=1	[more]
A0A0A0KCG4_CUCSA	2.9e-33	71.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G224020 PE=4 SV=1	[more]
A0A0A0KEQ8_CUCSA	2.4e-16	43.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G295940 PE=4 SV=1	[more]
A0A0A0KY93_CUCSA	5.4e-08	61.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G151750 PE=4 SV=1	[more]

BLAST of CSPI07G08700 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI07G08700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700188829\|gb\|KGN44062.1\|	2.6e-112	100.00	hypothetical protein Csa_7G157510 [Cucumis sativus]	[more]
gi\|700192034\|gb\|KGN47238.1\|	4.1e-33	71.07	hypothetical protein Csa_6G224020 [Cucumis sativus]	[more]
gi\|659072254\|ref\|XP_008464440.1\|	3.4e-19	64.77	PREDICTED: uncharacterized protein LOC103502324 [Cucumis melo]	[more]
gi\|700192115\|gb\|KGN47319.1\|	3.5e-16	43.79	hypothetical protein Csa_6G295940 [Cucumis sativus]	[more]
gi\|700198661\|gb\|KGN53819.1\|	7.8e-08	61.11	hypothetical protein Csa_4G151750 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G08700.1	CSPI07G08700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 82..109 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G08700	Csa7G157510	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G08700	CsaV3_7G018410	Cucumber (Chinese Long) v3	cpicucB418

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G08700	Wax gourd	cpiwgoB713
CSPI07G08700	Cucurbita maxima (Rimu)	cmacpiB042
CSPI07G08700	Cucurbita maxima (Rimu)	cmacpiB506
CSPI07G08700	Cucurbita moschata (Rifu)	cmocpiB032
CSPI07G08700	Cucurbita moschata (Rifu)	cmocpiB496
CSPI07G08700	Melon (DHL92) v3.5.1	cpimeB533
CSPI07G08700	Watermelon (Charleston Gray)	cpiwcgB549
CSPI07G08700	Watermelon (97103) v1	cpiwmB581
CSPI07G08700	Cucurbita pepo (Zucchini)	cpecpiB592
CSPI07G08700	Cucurbita pepo (Zucchini)	cpecpiB799
CSPI07G08700	Bottle gourd (USVL1VR-Ls)	cpilsiB527
CSPI07G08700	Melon (DHL92) v3.6.1	cpimedB537
CSPI07G08700	Cucumber (Gy14) v2	cgybcpiB334
CSPI07G08700	Silver-seed gourd	carcpiB0920
CSPI07G08700	Silver-seed gourd	carcpiB0945
CSPI07G08700	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G08700	Watermelon (97103) v2	cpiwmbB593