CSPI07G08510 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G08510
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	Chr7 : 6330788 .. 6334401 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATAAAGCTTATTCTTGTTACCTATCTAGATCTAGTGCCTGTAATGTCTATGAAAAAATGAAATGGATCCCTAAATATGTAAATGCTAACATTCTAGGACCCAAACAAGTATGGGTACCAAAGGATCAAACTTGAAATTAGTTGTTTTTAGGTTTGTTTGAAAGCCTCCAAGAAAAACAAATGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGAGACCGATCCAAGCTTATCTCTTTCTCCAAAAAGAATGGAGGCATGGTAACCTTTGGTGACAACAAGAAAGGTAAAATAATTGGTAAGGGTAATATAGGAAATGATTCATCTACTTTGATTGAAAATGTTCATTTGGTTGATGGTTTAAAGCATGATTTGCTTAGTATTAGTCAATTGTGTGATAAAGGATTTAGAGTAATATTTGATAAAAAAAAATTGCATAATTGAAAATGTTAGTGATAGAAAAGTTTTGTTTGTTGGAAATAGGGATGAAAATGTGTACACTCTTGATTTGAATGATTATCCTATTATTGATAAATGTCTTTCGGTTTTGCATAATGATTCTTGGTTATGGCATAGAAGACTAGGACATGCTAGCATGCACTTAATTTCAAATATTTCTAAAAATTGTTTGGTTAGAGGTCTTCCTAGTTTTAAATTTGAAAAAGACAAAGTTTGTGATGCTTGTCAAATGGGTAAGCAAACTAAGTCCTCTTTCAAATCTAAAAATGTGATCTCTACTACTAGACCCTTACAACTATTACACATGGACTTATTTGGCCCTTCTAGAATTGCTAGTTATGGAGGAAATTATTATGCTTTTGTGATAGTTGATGATTTTTCTAGATTTACTTGGGTTTTGATGATAAAACATAAGGATGATGCTTTGAAAAGTTTTATTAGTTTTGCAAAAAGAGTACAAAATGAAAAAGGATTTTTTATTTCCAAAATTAGGAGTGATCACGGAGGAGAATTTGATAATGATGCTTTTAAAGATTTTTGTCAAGAAAATGGTTTTTCCCATCATTTTTTCTCTCCAAGAACTCCTCAACAAAATGGTGTGGTTGAAAGGAAAAATCGTACTTTGCAAGAATTTGCTAGATCACGGAAATAGGGATGAAAATGTGTACACTCTTGATTTGAATTATTATCCTATTATTGATAAATGTCTTTCGGTTTTCCATGATGATTCTTGGTTATGGCATAGAAGACTAGGACATGCTAGCATGCACTTAATTTCAAATATTTCTAAAAATTGTTTGGTTAGAGGTCTTCCTAGTTTTAAATTTGAAAAAGACAAAGTTTGTGATGCTTGTCAAATGGGTAAGCAAACTAAGTCCTCTTTCAAATCTAAAAATGTGATCTCTACTACTAGACCCTTACAACTATTACACATGGACTTATTTGGCCCTTCTAGAATTGCTAGTTATGGAGGAAATTATTATGCTTTTGTGATAGTTGATGATTTTTCTAGATTTACTTGGGTTTTGATGATAAAACATAAGGATGATGCTTTGAAAAGTTTTATTAGTTTTGCAAAAAGAGTACAAAATGAAAAAGGATTTTTTATTTCCAAAATTAGGAGTGATCACGGAGGAGAATTTGATAATGATGCTTTTAAAGCTTTTTGTGAAGAAAATGGTTTTTCCCATAATTTTTCCTCTCCAAGAACTCCTCAACAAAATGGTGTAGTTGAAAGGAAAAATCGTACTTTGCAAGAATTTGCTAGATCAATGTTGAATGAGTATGGTTTACCTAAATATTTTTGGACGGAAGCCGTTAACACCGCTTGCTATGTTTCAAATAGAGTTTTAGTTAGACCCTCTTTAGATAAAACTCCTTATGAACTTTGGCATGGAAAAATTCCAAATATTGGGTATTTCAAAGTTTTCGGTTGTAAATGTTTTATTTTGAATAACAAAGAAAAACTTGGAAAATTTGATTCTAAGACGGATGTTGGTATTTTTCTAGGATATTCCTCTACTAGTAAAGCTTATAGAGTTTTCAATAAGAAAACTTTAGTTATTGAGGAATCTATTCATGTTGTATTTGATGAATCTTGGAATAATGTTTCTAATGAGTCTATTTGTAGTGATGATTTAGAAAAAGATTTTGGAGATTTACTTGTTAATGACAAAGGCAAAGAAATTGTTCCAAGTATGCAAGATGTGAACATCATAGAAAAGAAAGAAGAGGGTTCTTCATCCTTGCCTAAAGAGTGGAGATATGCTCTATCCCATCCCAAGGATCTAATTCTTGGCAATCCCGAACAAGGTGTCAAAACTCGTTCTTCTCTTAATTTATTTAGTAATCTTGCTTTTGTGTCTCAAATTGAACCTAGAAGTTTTAAAGATGCCGAATGTGATGAGTTTTGGATTTTAGCTATGCAAGAAGAATTAAATCAATTTGAAAGAAACAAAGTTTGGAAATTAGTCCCTAGGCCTTCTAATGCATCTATAATCGGAACTAAATGGGTTTTTAGAAATAAGATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGGTTATTGTCAAGAAGAAGGTATAGATTATGAAGAGACTTTTGCACCGGTTGCTAGATTAGAAGCTATTAGAATGTTGCTTGCTTTTGCTTCTTATAAAAATTTCATTTTGTATCAAATGGATGTAAAAAGTGCTTTTTTAAACGGTTATATTGTAGAGGAAGTTTACGTAGAACAACCTCCGGGTTTTGAAAGTTTTGATTTACCTAATCATGTTTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTTAGCAAGTTTTTACTTGAGAATGACTTTAAGATGGGAAAAATTGATAATACTCTATTTATTAAAGTTAAAAATAATGACATGCTTATAGTACAAATTTATGTGGATGATATTATATTTGGTTCTACTAATTCATCTTTGTGTGAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAAAAACTCCTATGAGCACTACCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGTTTAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTCCATGCCGTTAAAAGGATACTTAAATATTTGCTTGGAACTATTGATGTTGGATTATGGTATCCTAGAAATGTTGAGTTTAATTTGGTAGGATATTCCGATGCGGACTTTGCCGGTAGTTTACTTGACCGTAAAAGTACTAGTGGGACTTGTCAATTTCTTGGTAGTTCCTTAGTATCTTGGTTTAGTAAAAAGCAAAATTCGGTTGCCTTATCCACTACCGAAGCGGAATATATTGCGGTTGCTAGTTGTTGTGCACAAATTCTTTGGATGAAACAACTCTTTGTGATTTTGGATTAA

mRNA sequence

ATGGACATAAAGCTTATTCTTGTTACCTATCTAGATCTAGTGCCTGTTTGTTTGAAAGCCTCCAAGAAAAACAAATGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGAGACCGATCCAAGCTTATCTCTTTCTCCAAAAAGAATGGAGGCATGGTAACCTTTGGTGACAACAAGAAAGGAGTGATCACGGAGGAGAATTTGATAATGATGCTTTTAAAGATTTTTGTCAAGAAAATGGTTTTTCCCATCATTTTTTCTCTCCAAGAACTCCTCAACAAAATGGTGTGGTTGAAAGGAAAAATCGTACTTTGCAAGAATTTGCTAGATCACGGAAATAGGGATGAAAATGTGTACACTCTTGATTTGAATTATTATCCTATTATTGATAAATGTCTTTCGGTTTTCCATGATGATTCTTGGTTATGGCATAGAAGACTAGGACATGCTAGCATGCACTTAATTTCAAATATTTCTAAAAATTGTTTGGTTAGAGGTCTTCCTAGTTTTAAATTTGAAAAAGACAAAGTTTGTGATGCTTGTCAAATGGGTAAGCAAACTAAGTCCTCTTTCAAATCTAAAAATGTGATCTCTACTACTAGACCCTTACAACTATTACACATGGACTTATTTGGCCCTTCTAGAATTGCTAGTTATGGAGGAAATTATTATGCTTTTGTGATAGTTGATGATTTTTCTAGATTTACTTGGGTTTTGATGATAAAACATAAGGATGATGCTTTGAAAAGTTTTATTAGTTTTGCAAAAAGAGTACAAAATGAAAAAGGATTTTTTATTTCCAAAATTAGGAGTGATCACGGAGGAGAATTTGATAATGATGCTTTTAAAGCTTTTTGTGAAGAAAATGGTTTTTCCCATAATTTTTCCTCTCCAAGAACTCCTCAACAAAATGGTGTAGTTGAAAGGAAAAATCGTACTTTGCAAGAATTTGCTAGATCAATGTTGAATGAGTATGGTTTACCTAAATATTTTTGGACGGAAGCCGTTAACACCGCTTGCTATGTTTCAAATAGAGTTTTAGTTAGACCCTCTTTAGATAAAACTCCTTATGAACTTTGGCATGGAAAAATTCCAAATATTGGGTATTTCAAAGTTTTCGGTTGTAAATGTTTTATTTTGAATAACAAAGAAAAACTTGGAAAATTTGATTCTAAGACGGATGTTGGTATTTTTCTAGGATATTCCTCTACTAGTAAAGCTTATAGAGTTTTCAATAAGAAAACTTTAGTTATTGAGGAATCTATTCATGTTGTATTTGATGAATCTTGGAATAATGTTTCTAATGAGTCTATTTGTAGTGATGATTTAGAAAAAGATTTTGGAGATTTACTTGTTAATGACAAAGGCAAAGAAATTGTTCCAAGTATGCAAGATGTGAACATCATAGAAAAGAAAGAAGAGGGTTCTTCATCCTTGCCTAAAGAGTGGAGATATGCTCTATCCCATCCCAAGGATCTAATTCTTGGCAATCCCGAACAAGGTGTCAAAACTCGTTCTTCTCTTAATTTATTTAGTAATCTTGCTTTTGTGTCTCAAATTGAACCTAGAAGTTTTAAAGATGCCGAATGTGATGAGTTTTGGATTTTAGCTATGCAAGAAGAATTAAATCAATTTGAAAGAAACAAAGTTTGGAAATTAGTCCCTAGGCCTTCTAATGCATCTATAATCGGAACTAAATGGGTTTTTAGAAATAAGATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGGTTATTGTCAAGAAGAAGGTATAGATTATGAAGAGACTTTTGCACCGGTTGCTAGATTAGAAGCTATTAGAATGTTGCTTGCTTTTGCTTCTTATAAAAATTTCATTTTGTATCAAATGGATGTAAAAAGTGCTTTTTTAAACGGTTATATTGTAGAGGAAGTTTACGTAGAACAACCTCCGGGTTTTGAAAGTTTTGATTTACCTAATCATGTTTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTTAGCAAGTTTTTACTTGAGAATGACTTTAAGATGGGAAAAATTGATAATACTCTATTTATTAAAGTTAAAAATAATGACATGCTTATAGTACAAATTTATGTGGATGATATTATATTTGGTTCTACTAATTCATCTTTGTGTGAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAAAAACTCCTATGAGCACTACCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGTTTAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTCCATGCCGTTAAAAGGATACTTAAATATTTGCTTGGAACTATTGATGTTGGATTATGGTATCCTAGAAATGTTGAGTTTAATTTGGTAGGATATTCCGATGCGGACTTTGCCGGTAGTTTACTTGACCGTAAAAGTACTAGTGGGACTTGTCAATTTCTTGGTAGTTCCTTAGTATCTTGGTTTAGTAAAAAGCAAAATTCGGTTGCCTTATCCACTACCGAAGCGGAATATATTGCGGTTGCTAGTTGTTGTGCACAAATTCTTTGGATGAAACAACTCTTTGTGATTTTGGATTAA

Coding sequence (CDS)

ATGGACATAAAGCTTATTCTTGTTACCTATCTAGATCTAGTGCCTGTTTGTTTGAAAGCCTCCAAGAAAAACAAATGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGAGACCGATCCAAGCTTATCTCTTTCTCCAAAAAGAATGGAGGCATGGTAACCTTTGGTGACAACAAGAAAGGAGTGATCACGGAGGAGAATTTGATAATGATGCTTTTAAAGATTTTTGTCAAGAAAATGGTTTTTCCCATCATTTTTTCTCTCCAAGAACTCCTCAACAAAATGGTGTGGTTGAAAGGAAAAATCGTACTTTGCAAGAATTTGCTAGATCACGGAAATAGGGATGAAAATGTGTACACTCTTGATTTGAATTATTATCCTATTATTGATAAATGTCTTTCGGTTTTCCATGATGATTCTTGGTTATGGCATAGAAGACTAGGACATGCTAGCATGCACTTAATTTCAAATATTTCTAAAAATTGTTTGGTTAGAGGTCTTCCTAGTTTTAAATTTGAAAAAGACAAAGTTTGTGATGCTTGTCAAATGGGTAAGCAAACTAAGTCCTCTTTCAAATCTAAAAATGTGATCTCTACTACTAGACCCTTACAACTATTACACATGGACTTATTTGGCCCTTCTAGAATTGCTAGTTATGGAGGAAATTATTATGCTTTTGTGATAGTTGATGATTTTTCTAGATTTACTTGGGTTTTGATGATAAAACATAAGGATGATGCTTTGAAAAGTTTTATTAGTTTTGCAAAAAGAGTACAAAATGAAAAAGGATTTTTTATTTCCAAAATTAGGAGTGATCACGGAGGAGAATTTGATAATGATGCTTTTAAAGCTTTTTGTGAAGAAAATGGTTTTTCCCATAATTTTTCCTCTCCAAGAACTCCTCAACAAAATGGTGTAGTTGAAAGGAAAAATCGTACTTTGCAAGAATTTGCTAGATCAATGTTGAATGAGTATGGTTTACCTAAATATTTTTGGACGGAAGCCGTTAACACCGCTTGCTATGTTTCAAATAGAGTTTTAGTTAGACCCTCTTTAGATAAAACTCCTTATGAACTTTGGCATGGAAAAATTCCAAATATTGGGTATTTCAAAGTTTTCGGTTGTAAATGTTTTATTTTGAATAACAAAGAAAAACTTGGAAAATTTGATTCTAAGACGGATGTTGGTATTTTTCTAGGATATTCCTCTACTAGTAAAGCTTATAGAGTTTTCAATAAGAAAACTTTAGTTATTGAGGAATCTATTCATGTTGTATTTGATGAATCTTGGAATAATGTTTCTAATGAGTCTATTTGTAGTGATGATTTAGAAAAAGATTTTGGAGATTTACTTGTTAATGACAAAGGCAAAGAAATTGTTCCAAGTATGCAAGATGTGAACATCATAGAAAAGAAAGAAGAGGGTTCTTCATCCTTGCCTAAAGAGTGGAGATATGCTCTATCCCATCCCAAGGATCTAATTCTTGGCAATCCCGAACAAGGTGTCAAAACTCGTTCTTCTCTTAATTTATTTAGTAATCTTGCTTTTGTGTCTCAAATTGAACCTAGAAGTTTTAAAGATGCCGAATGTGATGAGTTTTGGATTTTAGCTATGCAAGAAGAATTAAATCAATTTGAAAGAAACAAAGTTTGGAAATTAGTCCCTAGGCCTTCTAATGCATCTATAATCGGAACTAAATGGGTTTTTAGAAATAAGATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGGTTATTGTCAAGAAGAAGGTATAGATTATGAAGAGACTTTTGCACCGGTTGCTAGATTAGAAGCTATTAGAATGTTGCTTGCTTTTGCTTCTTATAAAAATTTCATTTTGTATCAAATGGATGTAAAAAGTGCTTTTTTAAACGGTTATATTGTAGAGGAAGTTTACGTAGAACAACCTCCGGGTTTTGAAAGTTTTGATTTACCTAATCATGTTTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTTAGCAAGTTTTTACTTGAGAATGACTTTAAGATGGGAAAAATTGATAATACTCTATTTATTAAAGTTAAAAATAATGACATGCTTATAGTACAAATTTATGTGGATGATATTATATTTGGTTCTACTAATTCATCTTTGTGTGAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAAAAACTCCTATGAGCACTACCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGTTTAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTCCATGCCGTTAAAAGGATACTTAAATATTTGCTTGGAACTATTGATGTTGGATTATGGTATCCTAGAAATGTTGAGTTTAATTTGGTAGGATATTCCGATGCGGACTTTGCCGGTAGTTTACTTGACCGTAAAAGTACTAGTGGGACTTGTCAATTTCTTGGTAGTTCCTTAGTATCTTGGTTTAGTAAAAAGCAAAATTCGGTTGCCTTATCCACTACCGAAGCGGAATATATTGCGGTTGCTAGTTGTTGTGCACAAATTCTTTGGATGAAACAACTCTTTGTGATTTTGGATTAA

Homology

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BLAST of CSPI07G08510 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.2e-123
Identity = 287/830 (34.58%), Postives = 433/830 (52.17%), Query Frame = 1


Query: 143  LWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDACQMGKQTKSSFKSKNVISTTR 202
            LWH+R+GH S   +  ++K  L+      K    K CD C  GKQ + SF++ +      
Sbjct: 424  LWHKRMGHMSEKGLQILAKKSLISYA---KGTTVKPCDYCLFGKQHRVSFQTSSE-RKLN 483

Query: 203  PLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLMIKHKDDALKSFISFAKRVQNE 262
             L L++ D+ GP  I S GGN Y    +DD SR  WV ++K KD   + F  F   V+ E
Sbjct: 484  ILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERE 543

Query: 263  KGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRTPQQNGVVERKNRTLQEFARSM 322
             G  + ++RSD+GGE+ +  F+ +C  +G  H  + P TPQ NGV ER NRT+ E  RSM
Sbjct: 544  TGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSM 603

Query: 323  LNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELWHGKIPNIGYFKVFGCKCFILN 382
            L    LPK FW EAV TACY+ NR    P   + P  +W  K  +  + KVFGC+ F   
Sbjct: 604  LRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHV 663

Query: 383  NKEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIEESIHVVFDESWNNVSNESICSD 442
             KE+  K D K+   IF+GY      YR+++     +  S  VVF ES   V   +  S+
Sbjct: 664  PKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRES--EVRTAADMSE 723

Query: 443  DLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSLPKEWRYALSHPKDLILG----- 502
             ++       V        P+  +    E  E+G    P E    +   + L  G     
Sbjct: 724  KVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQ--PGE---VIEQGEQLDEGVEEVE 783

Query: 503  NPEQGVKTRSSL----------NLFSNLAFV---SQIEPRSFKDA----ECDEFWILAMQ 562
            +P QG +    L            + +  +V      EP S K+     E ++  + AMQ
Sbjct: 784  HPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQL-MKAMQ 843

Query: 563  EELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDY 622
            EE+   ++N  +KLV  P     +  KWVF+ K D +  ++R KARLV +G+ Q++GID+
Sbjct: 844  EEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDF 903

Query: 623  EETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPN 682
            +E F+PV ++ +IR +L+ A+  +  + Q+DVK+AFL+G + EE+Y+EQP GFE     +
Sbjct: 904  DEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKH 963

Query: 683  HVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIK-VKNNDMLIVQIYVDD 742
             V KL K+LYGLKQAPR WY +   F+    +     D  ++ K    N+ +I+ +YVDD
Sbjct: 964  MVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDD 1023

Query: 743  IIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQI--KQLKDGIFISQEKYTRDLLK 802
            ++    +  L  +    +   F+M  +G     LG++I  ++    +++SQEKY   +L+
Sbjct: 1024 MLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLE 1083

Query: 803  KFKLNEGKVAKTPMSTTTKLDK-------DEKGKCVDIKTYRGMIGSLLY-LTASRPDIM 862
            +F +   K   TP++   KL K       +EKG    +  Y   +GSL+Y +  +RPDI 
Sbjct: 1084 RFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKV-PYSSAVGSLMYAMVCTRPDIA 1143

Query: 863  FSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLD 922
             +V + +RF   P + H+ AVK IL+YL GT    L +  +    L GY+DAD AG + +
Sbjct: 1144 HAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDN 1203

Query: 923  RKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQ 940
            RKS++G         +SW SK Q  VALSTTEAEYIA      +++W+K+
Sbjct: 1204 RKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKR 1239

[Close]

BLAST of CSPI07G08510 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 289.3 bits (739), Expect = 1.6e-76
Identity = 161/433 (37.18%), Postives = 259/433 (59.82%), Query Frame = 1


Query: 523  PRSFKDAECDE---FWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGN 582
            P SF + +  +    W  A+  ELN  + N  W +  RP N +I+ ++WVF  K +E GN
Sbjct: 891  PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGN 950

Query: 583  IIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNG 642
             IR KARLVA+G+ Q+  IDYEETFAPVAR+ + R +L+     N  ++QMDVK+AFLNG
Sbjct: 951  PIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNG 1010

Query: 643  YIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDN 702
             + EE+Y+  P G       ++V KL KA+YGLKQA R W++   + L E +F    +D 
Sbjct: 1011 TLKEEIYMRLPQGISCNS--DNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDR 1070

Query: 703  TLFIKVKN--NDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQI 762
             ++I  K   N+ + V +YVDD++  + + +    F + +  +F M+ + E+  F+G++I
Sbjct: 1071 CIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI 1130

Query: 763  KQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKT-YRGMIG 822
            +  +D I++SQ  Y + +L KF +       TP+   +K++ +      D  T  R +IG
Sbjct: 1131 EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPL--PSKINYELLNSDEDCNTPCRSLIG 1190

Query: 823  SLLY-LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEF-- 882
             L+Y +  +RPD+  +V + +R+ S      +  +KR+L+YL GTID+ L + +N+ F  
Sbjct: 1191 CLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFEN 1250

Query: 883  NLVGYSDADFAGSLLDRKSTSG-TCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCA 942
             ++GY D+D+AGS +DRKST+G   +    +L+ W +K+QNSVA S+TEAEY+A+     
Sbjct: 1251 KIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVR 1310

Query: 943  QILWMKQLFVILD 946
            + LW+K L   ++
Sbjct: 1311 EALWLKFLLTSIN 1319

[Close]

BLAST of CSPI07G08510 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-35
Identity = 95/309 (30.74%), Postives = 165/309 (53.40%), Query Frame = 1


Query: 630 MDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLE 689
           MDV +AFLN  + E +YV+QPPGF +   P++V++L   +YGLKQAP  W + ++  L +
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 690 NDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGEL 749
             F   + ++ L+ +  ++  + + +YVDD++  + +  + +   + +   + M  +G++
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 750 SFFLGLQIKQLKDG-IFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDI 809
             FLGL I Q  +G I +S + Y      + ++N  K+ +TP+  +  L +       DI
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 810 KTYRGMIGSLLY-LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWY 869
             Y+ ++G LL+     RPDI + V L +RF   P+  H  + +R+L+YL  T  + L Y
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 870 PRNVEFNLVGYSDADFAGSLLD-RKSTSGTCQFLGSSLVSWFSKK-QNSVALSTTEAEYI 929
               +  L  Y DA   G++ D   ST G    L  + V+W SKK +  + + +TEAEYI
Sbjct: 241 RSGSQLALTVYCDASH-GAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYI 300

Query: 930 AVASCCAQI 935
             +    +I
Sbjct: 301 TASETVMEI 308

[Close]

BLAST of CSPI07G08510 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.3e-34
Identity = 81/225 (36.00%), Postives = 132/225 (58.67%), Query Frame = 1


Query: 715 IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRD 774
           +YVDDI+   ++++L       + + F M  +G + +FLG+QIK    G+F+SQ KY   
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 775 LLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTYRGMIGSLLYLTASRPDIMFS 834
           +L     N G +   PMST   L  +      K  D   +R ++G+L YLT +RPDI ++
Sbjct: 65  ILN----NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 124

Query: 835 VCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRK 894
           V +  +    P  + F  +KR+L+Y+ GTI  GL+  +N + N+  + D+D+AG    R+
Sbjct: 125 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 184

Query: 895 STSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILW 937
           ST+G C FLG +++SW +K+Q +V+ S+TE EY A+A   A++ W
Sbjct: 185 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of CSPI07G08510 vs. Swiss-Prot
Match: YJ41B_YEAST (Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY4B-J PE=3 SV=3)

HSP 1 Score: 120.6 bits (301), Expect = 9.6e-26
Identity = 112/415 (26.99%), Postives = 192/415 (46.27%), Query Frame = 1


Query: 538  AMQEELNQFERNKVWKLVPRPSNASI-----IGTKWVFRNKMDENGNIIRNKARLVAQGY 597
            A  +EL   +  KV+ +  + S + I     + T  +F  K   NG     KAR+V +G 
Sbjct: 1292 AYHKELQNLKDMKVFDVDVKYSRSEIPDNLIVPTNTIFTKK--RNGIY---KARIVCRGD 1351

Query: 598  CQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPG 657
             Q     Y            I++ L  A+ +N  +  +D+  AFL   + EE+Y+  P  
Sbjct: 1352 TQSPDT-YSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLEEEIYIPHPHD 1411

Query: 658  FESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLI 717
                     V KL KALYGLKQ+P+ W D L ++L     K       L+     N  L+
Sbjct: 1412 RRC------VVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGLYQTEDKN--LM 1471

Query: 718  VQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGEL------SFFLGLQIKQLK--DGI 777
            + +YVDD +  ++N    +EF   + + FE+ + G L      +  LG+ +   K    I
Sbjct: 1472 IAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMDLVYNKRLGTI 1531

Query: 778  FISQEKYTRDLLKKFKLNEGKVAKT--PMSTTTKLDKDEKGKCVDIKTYR-------GMI 837
             ++ + +   + KK+     K+ K+  P  +T K+D  +    +  + +R        ++
Sbjct: 1532 DLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFRQGVLKLQQLL 1591

Query: 838  GSLLYLT-ASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPR--NVE 897
            G L Y+    R DI F+V   AR  + P E  F+ + +I++YL+   D+G+ Y R  N +
Sbjct: 1592 GELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQYLVRYKDIGIHYDRDCNKD 1651

Query: 898  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAV 928
              ++  +DA   GS  D +S  G   + G ++ + +S K  +  +S+TEAE  A+
Sbjct: 1652 KKVIAITDAS-VGSEYDAQSRIGVILWYGMNIFNVYSNKSTNRCVSSTEAELHAI 1691

[Close]

BLAST of CSPI07G08510 vs. TrEMBL
Match: A5C8K0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001808 PE=4 SV=1)

HSP 1 Score: 1149.0 bits (2971), Expect = 0.0e+00
Identity = 582/941 (61.85%), Postives = 701/941 (74.50%), Query Frame = 1


Query: 12   DLVPVCLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGVITEENLI- 71
            +++    K SK++KW+LDSGCSRHMTGD SK    +K+ GG VTFGDN KG I  +  I 
Sbjct: 460  EMILASQKCSKEDKWFLDSGCSRHMTGDESKFAFLTKRKGGYVTFGDNAKGRIIGQGNIG 519

Query: 72   ----MMLLKIFVKKMVFPIIFSLQELLNK--MVWLKGKIVLCKNLLDH-----GNRDENV 131
                 ++  + +   +   + S+ +L NK   V  +    + K++ +      G+R ENV
Sbjct: 520  NGTSSLIESVLLVDGLKHNLLSISQLCNKGFKVIFEASHCIIKDIQNDKTIFMGHRCENV 579

Query: 132  YTLDLNYYPIIDKCLSVFHDDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVC 191
            Y ++++ Y   D+C S  HD SWLWHRRLGHA+M LIS ++K+ LVRGLP   F+KDK+C
Sbjct: 580  YAINISKYDGHDRCFSSMHDQSWLWHRRLGHANMDLISQLNKDELVRGLPKINFQKDKIC 639

Query: 192  DACQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWV 251
            +ACQMGKQ K+SFK+KN IST+RPL+LLHMDLFGPSR  S GG  YA+VIVDDFSR+TWV
Sbjct: 640  EACQMGKQIKNSFKNKNFISTSRPLELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWV 699

Query: 252  LMIKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSP 311
            L +  K +A   F  F  +VQNEKGF I+ IRSDHG EF+N  F+ +C + G +HNF +P
Sbjct: 700  LFLSQKSEAFYEFSKFCNKVQNEKGFSITCIRSDHGREFENFDFEEYCNKYGINHNFLAP 759

Query: 312  RTPQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYE 371
            RT QQNGVVERKNRTLQE AR+MLNE  LPKYFW EA+NT+CYV NR+L+RP L KTPYE
Sbjct: 760  RTSQQNGVVERKNRTLQEMARTMLNENNLPKYFWAEAINTSCYVLNRILLRPILKKTPYE 819

Query: 372  LWHGKIPNIGYFKVFGCKCFILNNKEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVI 431
            LW  K PNI YFKVFGCKCFILN K+ LGKFD+K+DVGIFLGYS++SKA+RVFNK+T+V+
Sbjct: 820  LWKNKKPNISYFKVFGCKCFILNTKDNLGKFDAKSDVGIFLGYSTSSKAFRVFNKRTMVV 879

Query: 432  EESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSS 491
            EESIH  +   W N    +       KD      N K  E +P        +K       
Sbjct: 880  EESIH-DWRLPWENCKLRT-------KD------NKKKVERIPR-------KKNHLWHYL 939

Query: 492  LPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILA 551
            L  + ++ ++HP+D I+GNP  GV+TRSSL N+ +NLAF+SQIEP++ KDA  DE W++A
Sbjct: 940  LLNKCKFVINHPQDQIIGNPLSGVRTRSSLRNICNNLAFISQIEPKNIKDAIVDENWMIA 999

Query: 552  MQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGI 611
            MQ+ELNQFER++VW+LVPRPSN S+IGTKWVFRNKMDENG I+RNKARLVAQGY QEEGI
Sbjct: 1000 MQKELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEEGI 1059

Query: 612  DYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDL 671
            DYEETFAPVARLEAIRMLLAFA +K+FILYQMDVKSAFLNG+I EE+YVEQPPGF+SF+ 
Sbjct: 1060 DYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEIYVEQPPGFQSFNF 1119

Query: 672  PNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVD 731
            PNHV+KLKKALYGLKQAPRAWY+RLSKFLL+  FKMGKID TLFIK K NDML+VQIYVD
Sbjct: 1120 PNHVFKLKKALYGLKQAPRAWYERLSKFLLKKSFKMGKIDTTLFIKTKENDMLLVQIYVD 1179

Query: 732  DIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKK 791
            DI FG+TN SLCE+FSKCMH                               KY +DLLK+
Sbjct: 1180 DITFGATNDSLCEDFSKCMHT------------------------------KYIKDLLKR 1239

Query: 792  FKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARF 851
            F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARF
Sbjct: 1240 FNMGEAKVMKTPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARF 1299

Query: 852  QSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQ 911
            QSCPKESH  AVKRIL+YL GT+ +GLWYP+   F L+G+SDADFAG  ++RKSTSGTC 
Sbjct: 1300 QSCPKESHLSAVKRILRYLKGTMSIGLWYPKGDNFELIGFSDADFAGCRVERKSTSGTCH 1349

Query: 912  FLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQ 940
             LG SLVSW SKKQNS+ALST EAEY A + C AQILWMKQ
Sbjct: 1360 SLGHSLVSWHSKKQNSIALSTAEAEYTAASLCYAQILWMKQ 1349

[Close]

BLAST of CSPI07G08510 vs. TrEMBL
Match: A0A151UHG7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_048795 PE=4 SV=1)

HSP 1 Score: 1142.5 bits (2954), Expect = 0.0e+00
Identity = 581/940 (61.81%), Postives = 705/940 (75.00%), Query Frame = 1


Query: 17   CLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGVI---------TEE 76
            CL+A K   WYLDSGCSRHMTGD SK  +   KN G VT+GDN KG I         + +
Sbjct: 537  CLRA-KNLLWYLDSGCSRHMTGDPSKFTNLKLKNEGYVTYGDNNKGKILGHGNVGNPSSQ 596

Query: 77   NLIMMLLKIFVKKMVFPIIFSLQELLNKMVWLKGKIVLC----KNLLDHGNRDENVYTLD 136
             LI  +L +   K     I  L +   K+ +     ++C    K +   G R +N+Y LD
Sbjct: 597  TLIENVLLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLD 656

Query: 137  LNYYPIID--KCLSVFHDDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDA 196
            L +   +   KCL    ++ WLWHRR  H  M  ++ + +  LV GLP  KF KDK+CDA
Sbjct: 657  LEHSITMSNTKCLITQEENIWLWHRRAAHIHMDHLNKLCRKELVVGLPKLKFGKDKLCDA 716

Query: 197  CQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLM 256
            CQ GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ 
Sbjct: 717  CQKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMF 776

Query: 257  IKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRT 316
            + +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRT
Sbjct: 777  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRT 836

Query: 317  PQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELW 376
            PQQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V N+VL+RP L KTPYE++
Sbjct: 837  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 896

Query: 377  HGKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIE 436
             GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SKAYR++NK+TLV+E
Sbjct: 897  KGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVE 956

Query: 437  ESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSL 496
            ES+HVVFDES N         +DL +     L+ ++  E+    +    +EK +E    L
Sbjct: 957  ESVHVVFDES-NKQETRQTEIEDLNELLDQSLLENEPNEVPKESES---LEKAKETCEQL 1016

Query: 497  PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAM 556
            PKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W++AM
Sbjct: 1017 PKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAM 1076

Query: 557  QEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGID 616
            QEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEEGID
Sbjct: 1077 QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGID 1136

Query: 617  YEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLP 676
            Y+ETFAPVAR+EAIR+LLA++S KNF LYQMDVKSAFLNG+I EEVYVEQPPGF  +  P
Sbjct: 1137 YDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGFIQEEVYVEQPPGFVDYKNP 1196

Query: 677  NHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDD 736
            NHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIYVDD
Sbjct: 1197 NHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDTMYVQIYVDD 1256

Query: 737  IIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKF 796
            I+FGSTN+SLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DGIFISQ KY  +LLKKF
Sbjct: 1257 IVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGIFISQSKYCNELLKKF 1316

Query: 797  KLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQ 856
             +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCARFQ
Sbjct: 1317 GMEGCKEAATPISNNCNLDLDEKGIAVDSSKYRGIIGSLLYLTASRPDIMFAVCLCARFQ 1376

Query: 857  SCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQF 916
            + PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+D+AG  LDRKSTSGTC  
Sbjct: 1377 ANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHL 1436

Query: 917  LGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQ 940
            LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ
Sbjct: 1437 LGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQ 1471

[Close]

BLAST of CSPI07G08510 vs. TrEMBL
Match: A0A151RY83_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_030937 PE=4 SV=1)

HSP 1 Score: 1137.9 bits (2942), Expect = 0.0e+00
Identity = 586/943 (62.14%), Postives = 702/943 (74.44%), Query Frame = 1


Query: 18   LKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGVI---------TEEN 77
            L  +K   WYLDSGCSRHMTGD SK  S   KN G VT+GDN KG I         + + 
Sbjct: 542  LLRAKNLLWYLDSGCSRHMTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQT 601

Query: 78   LIMMLLKIFVKKMVFPIIFSLQELLNKMVWLKGKIVLC----KNLLDHGNRDENVYTLDL 137
            LI  +L +   K     I  L +   K+ +     ++C    K +   G R +N+Y LDL
Sbjct: 602  LIENVLLVDGLKHNLLSISQLSDKGFKIEFDDTCCLICDKRSKEIRFIGKRIDNIYMLDL 661

Query: 138  NYYPIID--KCLSVFHDDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDAC 197
             +   +   KCL    + +WLWHRR  H  M  ++ +S+  LV GLP  KF KDK+CDAC
Sbjct: 662  EHSISMSNTKCLITQEESTWLWHRRAAHIHMDHLNKLSRKELVVGLPKLKFGKDKLCDAC 721

Query: 198  QMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLMI 257
            Q GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ +
Sbjct: 722  QKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMFL 781

Query: 258  KHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRTP 317
             +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRTP
Sbjct: 782  ANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTP 841

Query: 318  QQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELWH 377
            QQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V NRVL+RP L KTPYE++ 
Sbjct: 842  QQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNRVLIRPILKKTPYEIYK 901

Query: 378  GKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIEE 437
            GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SK+YR++NK+TLV+EE
Sbjct: 902  GKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKSYRIYNKRTLVVEE 961

Query: 438  SIHVVFDESWNNVSNESICSDDLEKDFGDLLV----NDKGKEIVPSMQDVNIIEKKEEGS 497
            S+HVVFDES N         +DL +     L+    N+K KE V         EK++   
Sbjct: 962  SVHVVFDES-NKQETRQTEIEDLNELLDQPLLESEPNEKSKESVSH-------EKEKVTC 1021

Query: 498  SSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWI 557
              LPKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W+
Sbjct: 1022 EQLPKEWKTSRELSIDNIIGNIGKGVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWL 1081

Query: 558  LAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEE 617
            +AMQEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEE
Sbjct: 1082 MAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEE 1141

Query: 618  GIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESF 677
            GIDY+ETFAPVAR+EAIR+LLA++S KNF LYQMDVKSAFLNG I EEVYVEQPPGF  F
Sbjct: 1142 GIDYDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDF 1201

Query: 678  DLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIY 737
              PNHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIY
Sbjct: 1202 KNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKRFKNDTMYVQIY 1261

Query: 738  VDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLL 797
            VDDI+FGSTNSSLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DG FISQ KY  +LL
Sbjct: 1262 VDDIVFGSTNSSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGTFISQSKYCNELL 1321

Query: 798  KKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCA 857
            KKF +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCA
Sbjct: 1322 KKFGMEGCKEAATPISNNCNLDLDEKGIAVDNSKYRGIIGSLLYLTASRPDIMFAVCLCA 1381

Query: 858  RFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGT 917
            RFQ+ PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+DFAG  LDRKSTSGT
Sbjct: 1382 RFQANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDFAGCRLDRKSTSGT 1441

Query: 918  CQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQ 940
            C  LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ
Sbjct: 1442 CHLLGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQ 1476

[Close]

BLAST of CSPI07G08510 vs. TrEMBL
Match: A0A151QSZ9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_045700 PE=4 SV=1)

HSP 1 Score: 1135.2 bits (2935), Expect = 0.0e+00
Identity = 586/942 (62.21%), Postives = 703/942 (74.63%), Query Frame = 1


Query: 17   CLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGVI---------TEE 76
            CL+A K   WYLDSGCSRHMTGD SK  S   KN G VT+GDN KG I         + +
Sbjct: 537  CLRA-KNLLWYLDSGCSRHMTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQ 596

Query: 77   NLIMMLLKIFVKKMVFPIIFSLQELLNKMVWLKGKIVLC----KNLLDHGNRDENVYTLD 136
             LI  +L +   K     I  L +   K+ +     ++C    K +   G R +N+Y LD
Sbjct: 597  TLIENVLLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLD 656

Query: 137  LNYYPIID--KCLSVFHDDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDA 196
            L +   I   KCL    ++ WLWHRR  H  M  ++ +S+  LV GLP  KF KDK+CDA
Sbjct: 657  LEHSIAISNTKCLITQEENIWLWHRRAAHIHMDHLNKLSRKELVVGLPKLKFGKDKLCDA 716

Query: 197  CQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLM 256
            CQ GKQ K+SFKSKN ISTTRPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ 
Sbjct: 717  CQKGKQVKASFKSKNQISTTRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMF 776

Query: 257  IKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRT 316
            + +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRT
Sbjct: 777  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRT 836

Query: 317  PQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELW 376
            PQQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V N+VL+RP L KTPYE++
Sbjct: 837  PQQNGVVERKNRSLEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 896

Query: 377  HGKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIE 436
            +G+ PNI YF+VFGCKCF+LNN KE+LGKFD+K D  IFLGYS+ SKAYR++NK+TLV+E
Sbjct: 897  NGRKPNISYFRVFGCKCFVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVE 956

Query: 437  ESIHVVFDESWNNVSNESIC---SDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGS 496
            ES+HVVFDES    + ++     +D L++   +   N+K KE           E  +E S
Sbjct: 957  ESVHVVFDESNKQETRQTEIEDLTDLLDQPLLESETNNKPKESESH-------ENTKETS 1016

Query: 497  SSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWI 556
              LPKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP+S  +A  DE W+
Sbjct: 1017 EQLPKEWKTSRDLSIDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWL 1076

Query: 557  LAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEE 616
            +AMQEELNQFERN+VW LVP P++  IIGTKWVFRNK+DE+G IIRNKARLVA+GY QEE
Sbjct: 1077 MAMQEELNQFERNEVWDLVPLPTDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEE 1136

Query: 617  GIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESF 676
            GIDY+ETFAPVAR+EAIR+LLA++S  NF LYQMDVKSAFLNG I EEVYVEQPPGF  F
Sbjct: 1137 GIDYDETFAPVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDF 1196

Query: 677  DLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIY 736
              PNHVYKLKKALYGLKQAPR+WYDRLSKFL+END+  GK+DNTLF+K   ND + VQIY
Sbjct: 1197 KNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYVRGKVDNTLFVKKFKNDTMYVQIY 1256

Query: 737  VDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLL 796
            VDDI+FGSTN+SLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DGIFISQ KY  +LL
Sbjct: 1257 VDDIVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMSDGIFISQSKYCNELL 1316

Query: 797  KKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCA 856
            KKF +   K   TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF VCLCA
Sbjct: 1317 KKFGMEGCKEVATPISNNCNLDLDEKGIVVDNSKYRGIIGSLLYLTASRPDIMFVVCLCA 1376

Query: 857  RFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGT 916
            RFQ+ PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+D+AG  LDRKSTSGT
Sbjct: 1377 RFQANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGT 1436

Query: 917  CQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMK 939
            C  LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMK
Sbjct: 1437 CHLLGSALVSWNSKKQACVALSTAEAEYIAAGSCCAQILWMK 1470

[Close]

BLAST of CSPI07G08510 vs. TrEMBL
Match: A0A151QRU6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_046224 PE=4 SV=1)

HSP 1 Score: 1131.3 bits (2925), Expect = 0.0e+00
Identity = 579/940 (61.60%), Postives = 699/940 (74.36%), Query Frame = 1


Query: 17   CLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGVI---------TEE 76
            CL+A K   WYLDSGCSRHMTGD SK  S   KN G VT+GDN KG I         + +
Sbjct: 506  CLRA-KNLLWYLDSGCSRHMTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQ 565

Query: 77   NLIMMLLKIFVKKMVFPIIFSLQELLNKMVWLKGKIVLC----KNLLDHGNRDENVYTLD 136
             LI  +L +   K     I  L +   K+ +     ++C    K +   G R +N+Y LD
Sbjct: 566  TLIENVLLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLD 625

Query: 137  LNYYPIID--KCLSVFHDDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDA 196
            L +   +   KCL    ++ WLWHRR  H  M  ++ + +  LV GLP  KF KDK+CDA
Sbjct: 626  LEHSITMSNTKCLITQEENIWLWHRRAAHIHMDHLNKLCRKELVVGLPKLKFGKDKLCDA 685

Query: 197  CQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLM 256
            CQ GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ 
Sbjct: 686  CQKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMF 745

Query: 257  IKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRT 316
            + +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRT
Sbjct: 746  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRT 805

Query: 317  PQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELW 376
            PQQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V N+VL+RP L KTPYE++
Sbjct: 806  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 865

Query: 377  HGKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIE 436
             GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SKAYR++NK+TLV+E
Sbjct: 866  KGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVE 925

Query: 437  ESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSL 496
            ES+HVVFDES    + ++   D  E     LL N+       S   V    K++E    L
Sbjct: 926  ESVHVVFDESNKQETRQTEVEDLTELLDQSLLENEPNDVSKESESHV----KQKETCEQL 985

Query: 497  PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAM 556
            PKEW+       D I+G+  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W++AM
Sbjct: 986  PKEWKTTRDLSMDNIIGSIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAM 1045

Query: 557  QEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGID 616
            QEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEEGID
Sbjct: 1046 QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGID 1105

Query: 617  YEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLP 676
            Y+ETFAPVAR+EAIR+LLA+++ +NF LYQMDVKSAFLNG I EEVYVEQPPGF  F  P
Sbjct: 1106 YDETFAPVARIEAIRLLLAYSTIRNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNP 1165

Query: 677  NHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDD 736
            NHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIYVDD
Sbjct: 1166 NHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDTMYVQIYVDD 1225

Query: 737  IIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKF 796
            I+FGSTN SLC+EF+K M  EFEMSMMGEL+FFLGLQ+KQ+ DG FISQ KY  +LLKKF
Sbjct: 1226 IVFGSTNISLCKEFAKTMQGEFEMSMMGELTFFLGLQVKQMHDGTFISQSKYCNELLKKF 1285

Query: 797  KLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQ 856
             +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCARFQ
Sbjct: 1286 GMEGCKEAATPISNNCNLDLDEKGIAVDNSKYRGIIGSLLYLTASRPDIMFAVCLCARFQ 1345

Query: 857  SCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQF 916
            + PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+D+AG  LDRKSTSGTC  
Sbjct: 1346 ANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHL 1405

Query: 917  LGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQ 940
            LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ
Sbjct: 1406 LGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQ 1440

[Close]

BLAST of CSPI07G08510 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 318.5 bits (815), Expect = 1.3e-86
Identity = 171/424 (40.33%), Postives = 252/424 (59.43%), Query Frame = 1


Query: 522 EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNII 581
           EP ++ +A+    W  AM +E+   E    W++   P N   IG KWV++ K + +G I 
Sbjct: 85  EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 582 RNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYI 641
           R KARLVA+GY Q+EGID+ ETF+PV +L +++++LA ++  NF L+Q+D+ +AFLNG +
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204

Query: 642 VEEVYVEQPPGFESFD----LPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKI 701
            EE+Y++ PPG+ +       PN V  LKK++YGLKQA R W+ + S  L+   F     
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264

Query: 702 DNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQI 761
           D+T F+K+     L V +YVDDII  S N +  +E    + + F++  +G L +FLGL+I
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324

Query: 762 KQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGS 821
            +   GI I Q KY  DLL +  L   K +  PM  +        G  VD K YR +IG 
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGR 384

Query: 822 LLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVG 881
           L+YL  +R DI F+V   ++F   P+ +H  AV +IL Y+ GT+  GL+Y    E  L  
Sbjct: 385 LMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444

Query: 882 YSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWM 941
           +SDA F      R+ST+G C FLG+SL+SW SKKQ  V+ S+ EAEY A++    +++W+
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504

[Close]

BLAST of CSPI07G08510 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 148.7 bits (374), Expect = 1.8e-35
Identity = 81/225 (36.00%), Postives = 132/225 (58.67%), Query Frame = 1


Query: 715 IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRD 774
           +YVDDI+   ++++L       + + F M  +G + +FLG+QIK    G+F+SQ KY   
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 775 LLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTYRGMIGSLLYLTASRPDIMFS 834
           +L     N G +   PMST   L  +      K  D   +R ++G+L YLT +RPDI ++
Sbjct: 65  ILN----NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 124

Query: 835 VCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRK 894
           V +  +    P  + F  +KR+L+Y+ GTI  GL+  +N + N+  + D+D+AG    R+
Sbjct: 125 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 184

Query: 895 STSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILW 937
           ST+G C FLG +++SW +K+Q +V+ S+TE EY A+A   A++ W
Sbjct: 185 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of CSPI07G08510 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 100.5 bits (249), Expect = 5.8e-21
Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 1


Query: 522 EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNII 581
           EP+S   A  D  W  AMQEEL+   RNK W LVP P N +I+G KWVF+ K+  +G + 
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 582 RNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFA 621
           R KARLVA+G+ QEEGI + ET++PV R   IR +L  A
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of CSPI07G08510 vs. TAIR10
Match: ATMG00710.1 (ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-08
Identity = 30/76 (39.47%), Postives = 41/76 (53.95%), Query Frame = 1


Query: 312 NRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELWHGKIPNIGYF 371
           NRT+ E  RSML E GLPK F  +A NTA ++ N+          P E+W   +P   Y 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 372 KVFGCKCFILNNKEKL 388
           + FGC  +I  ++ KL
Sbjct: 62  RRFGCVAYIHCDEGKL 77

[Close]

BLAST of CSPI07G08510 vs. NCBI nr
Match: gi|147834092|emb|CAN64335.1| (hypothetical protein VITISV_001808 [Vitis vinifera])

HSP 1 Score: 1149.0 bits (2971), Expect = 0.0e+00
Identity = 582/941 (61.85%), Postives = 701/941 (74.50%), Query Frame = 1


Query: 12   DLVPVCLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGVITEENLI- 71
            +++    K SK++KW+LDSGCSRHMTGD SK    +K+ GG VTFGDN KG I  +  I 
Sbjct: 460  EMILASQKCSKEDKWFLDSGCSRHMTGDESKFAFLTKRKGGYVTFGDNAKGRIIGQGNIG 519

Query: 72   ----MMLLKIFVKKMVFPIIFSLQELLNK--MVWLKGKIVLCKNLLDH-----GNRDENV 131
                 ++  + +   +   + S+ +L NK   V  +    + K++ +      G+R ENV
Sbjct: 520  NGTSSLIESVLLVDGLKHNLLSISQLCNKGFKVIFEASHCIIKDIQNDKTIFMGHRCENV 579

Query: 132  YTLDLNYYPIIDKCLSVFHDDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVC 191
            Y ++++ Y   D+C S  HD SWLWHRRLGHA+M LIS ++K+ LVRGLP   F+KDK+C
Sbjct: 580  YAINISKYDGHDRCFSSMHDQSWLWHRRLGHANMDLISQLNKDELVRGLPKINFQKDKIC 639

Query: 192  DACQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWV 251
            +ACQMGKQ K+SFK+KN IST+RPL+LLHMDLFGPSR  S GG  YA+VIVDDFSR+TWV
Sbjct: 640  EACQMGKQIKNSFKNKNFISTSRPLELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWV 699

Query: 252  LMIKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSP 311
            L +  K +A   F  F  +VQNEKGF I+ IRSDHG EF+N  F+ +C + G +HNF +P
Sbjct: 700  LFLSQKSEAFYEFSKFCNKVQNEKGFSITCIRSDHGREFENFDFEEYCNKYGINHNFLAP 759

Query: 312  RTPQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYE 371
            RT QQNGVVERKNRTLQE AR+MLNE  LPKYFW EA+NT+CYV NR+L+RP L KTPYE
Sbjct: 760  RTSQQNGVVERKNRTLQEMARTMLNENNLPKYFWAEAINTSCYVLNRILLRPILKKTPYE 819

Query: 372  LWHGKIPNIGYFKVFGCKCFILNNKEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVI 431
            LW  K PNI YFKVFGCKCFILN K+ LGKFD+K+DVGIFLGYS++SKA+RVFNK+T+V+
Sbjct: 820  LWKNKKPNISYFKVFGCKCFILNTKDNLGKFDAKSDVGIFLGYSTSSKAFRVFNKRTMVV 879

Query: 432  EESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSS 491
            EESIH  +   W N    +       KD      N K  E +P        +K       
Sbjct: 880  EESIH-DWRLPWENCKLRT-------KD------NKKKVERIPR-------KKNHLWHYL 939

Query: 492  LPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILA 551
            L  + ++ ++HP+D I+GNP  GV+TRSSL N+ +NLAF+SQIEP++ KDA  DE W++A
Sbjct: 940  LLNKCKFVINHPQDQIIGNPLSGVRTRSSLRNICNNLAFISQIEPKNIKDAIVDENWMIA 999

Query: 552  MQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGI 611
            MQ+ELNQFER++VW+LVPRPSN S+IGTKWVFRNKMDENG I+RNKARLVAQGY QEEGI
Sbjct: 1000 MQKELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEEGI 1059

Query: 612  DYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDL 671
            DYEETFAPVARLEAIRMLLAFA +K+FILYQMDVKSAFLNG+I EE+YVEQPPGF+SF+ 
Sbjct: 1060 DYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEIYVEQPPGFQSFNF 1119

Query: 672  PNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVD 731
            PNHV+KLKKALYGLKQAPRAWY+RLSKFLL+  FKMGKID TLFIK K NDML+VQIYVD
Sbjct: 1120 PNHVFKLKKALYGLKQAPRAWYERLSKFLLKKSFKMGKIDTTLFIKTKENDMLLVQIYVD 1179

Query: 732  DIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKK 791
            DI FG+TN SLCE+FSKCMH                               KY +DLLK+
Sbjct: 1180 DITFGATNDSLCEDFSKCMHT------------------------------KYIKDLLKR 1239

Query: 792  FKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARF 851
            F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARF
Sbjct: 1240 FNMGEAKVMKTPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARF 1299

Query: 852  QSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQ 911
            QSCPKESH  AVKRIL+YL GT+ +GLWYP+   F L+G+SDADFAG  ++RKSTSGTC 
Sbjct: 1300 QSCPKESHLSAVKRILRYLKGTMSIGLWYPKGDNFELIGFSDADFAGCRVERKSTSGTCH 1349

Query: 912  FLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQ 940
             LG SLVSW SKKQNS+ALST EAEY A + C AQILWMKQ
Sbjct: 1360 SLGHSLVSWHSKKQNSIALSTAEAEYTAASLCYAQILWMKQ 1349

[Close]

BLAST of CSPI07G08510 vs. NCBI nr
Match: gi|1012367548|gb|KYP78729.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 1142.5 bits (2954), Expect = 0.0e+00
Identity = 581/940 (61.81%), Postives = 705/940 (75.00%), Query Frame = 1


Query: 17   CLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGVI---------TEE 76
            CL+A K   WYLDSGCSRHMTGD SK  +   KN G VT+GDN KG I         + +
Sbjct: 537  CLRA-KNLLWYLDSGCSRHMTGDPSKFTNLKLKNEGYVTYGDNNKGKILGHGNVGNPSSQ 596

Query: 77   NLIMMLLKIFVKKMVFPIIFSLQELLNKMVWLKGKIVLC----KNLLDHGNRDENVYTLD 136
             LI  +L +   K     I  L +   K+ +     ++C    K +   G R +N+Y LD
Sbjct: 597  TLIENVLLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLD 656

Query: 137  LNYYPIID--KCLSVFHDDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDA 196
            L +   +   KCL    ++ WLWHRR  H  M  ++ + +  LV GLP  KF KDK+CDA
Sbjct: 657  LEHSITMSNTKCLITQEENIWLWHRRAAHIHMDHLNKLCRKELVVGLPKLKFGKDKLCDA 716

Query: 197  CQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLM 256
            CQ GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ 
Sbjct: 717  CQKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMF 776

Query: 257  IKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRT 316
            + +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRT
Sbjct: 777  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRT 836

Query: 317  PQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELW 376
            PQQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V N+VL+RP L KTPYE++
Sbjct: 837  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 896

Query: 377  HGKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIE 436
             GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SKAYR++NK+TLV+E
Sbjct: 897  KGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVE 956

Query: 437  ESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSL 496
            ES+HVVFDES N         +DL +     L+ ++  E+    +    +EK +E    L
Sbjct: 957  ESVHVVFDES-NKQETRQTEIEDLNELLDQSLLENEPNEVPKESES---LEKAKETCEQL 1016

Query: 497  PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAM 556
            PKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W++AM
Sbjct: 1017 PKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAM 1076

Query: 557  QEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGID 616
            QEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEEGID
Sbjct: 1077 QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGID 1136

Query: 617  YEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLP 676
            Y+ETFAPVAR+EAIR+LLA++S KNF LYQMDVKSAFLNG+I EEVYVEQPPGF  +  P
Sbjct: 1137 YDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGFIQEEVYVEQPPGFVDYKNP 1196

Query: 677  NHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDD 736
            NHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIYVDD
Sbjct: 1197 NHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDTMYVQIYVDD 1256

Query: 737  IIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKF 796
            I+FGSTN+SLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DGIFISQ KY  +LLKKF
Sbjct: 1257 IVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGIFISQSKYCNELLKKF 1316

Query: 797  KLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQ 856
             +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCARFQ
Sbjct: 1317 GMEGCKEAATPISNNCNLDLDEKGIAVDSSKYRGIIGSLLYLTASRPDIMFAVCLCARFQ 1376

Query: 857  SCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQF 916
            + PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+D+AG  LDRKSTSGTC  
Sbjct: 1377 ANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHL 1436

Query: 917  LGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQ 940
            LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ
Sbjct: 1437 LGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQ 1471

[Close]

BLAST of CSPI07G08510 vs. NCBI nr
Match: gi|1012336097|gb|KYP47407.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 1137.9 bits (2942), Expect = 0.0e+00
Identity = 586/943 (62.14%), Postives = 702/943 (74.44%), Query Frame = 1


Query: 18   LKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGVI---------TEEN 77
            L  +K   WYLDSGCSRHMTGD SK  S   KN G VT+GDN KG I         + + 
Sbjct: 542  LLRAKNLLWYLDSGCSRHMTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQT 601

Query: 78   LIMMLLKIFVKKMVFPIIFSLQELLNKMVWLKGKIVLC----KNLLDHGNRDENVYTLDL 137
            LI  +L +   K     I  L +   K+ +     ++C    K +   G R +N+Y LDL
Sbjct: 602  LIENVLLVDGLKHNLLSISQLSDKGFKIEFDDTCCLICDKRSKEIRFIGKRIDNIYMLDL 661

Query: 138  NYYPIID--KCLSVFHDDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDAC 197
             +   +   KCL    + +WLWHRR  H  M  ++ +S+  LV GLP  KF KDK+CDAC
Sbjct: 662  EHSISMSNTKCLITQEESTWLWHRRAAHIHMDHLNKLSRKELVVGLPKLKFGKDKLCDAC 721

Query: 198  QMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLMI 257
            Q GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ +
Sbjct: 722  QKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMFL 781

Query: 258  KHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRTP 317
             +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRTP
Sbjct: 782  ANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTP 841

Query: 318  QQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELWH 377
            QQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V NRVL+RP L KTPYE++ 
Sbjct: 842  QQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNRVLIRPILKKTPYEIYK 901

Query: 378  GKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIEE 437
            GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SK+YR++NK+TLV+EE
Sbjct: 902  GKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKSYRIYNKRTLVVEE 961

Query: 438  SIHVVFDESWNNVSNESICSDDLEKDFGDLLV----NDKGKEIVPSMQDVNIIEKKEEGS 497
            S+HVVFDES N         +DL +     L+    N+K KE V         EK++   
Sbjct: 962  SVHVVFDES-NKQETRQTEIEDLNELLDQPLLESEPNEKSKESVSH-------EKEKVTC 1021

Query: 498  SSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWI 557
              LPKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W+
Sbjct: 1022 EQLPKEWKTSRELSIDNIIGNIGKGVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWL 1081

Query: 558  LAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEE 617
            +AMQEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEE
Sbjct: 1082 MAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEE 1141

Query: 618  GIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESF 677
            GIDY+ETFAPVAR+EAIR+LLA++S KNF LYQMDVKSAFLNG I EEVYVEQPPGF  F
Sbjct: 1142 GIDYDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDF 1201

Query: 678  DLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIY 737
              PNHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIY
Sbjct: 1202 KNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKRFKNDTMYVQIY 1261

Query: 738  VDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLL 797
            VDDI+FGSTNSSLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DG FISQ KY  +LL
Sbjct: 1262 VDDIVFGSTNSSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGTFISQSKYCNELL 1321

Query: 798  KKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCA 857
            KKF +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCA
Sbjct: 1322 KKFGMEGCKEAATPISNNCNLDLDEKGIAVDNSKYRGIIGSLLYLTASRPDIMFAVCLCA 1381

Query: 858  RFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGT 917
            RFQ+ PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+DFAG  LDRKSTSGT
Sbjct: 1382 RFQANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDFAGCRLDRKSTSGT 1441

Query: 918  CQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQ 940
            C  LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ
Sbjct: 1442 CHLLGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQ 1476

[Close]

BLAST of CSPI07G08510 vs. NCBI nr
Match: gi|1012320775|gb|KYP33441.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 1135.2 bits (2935), Expect = 0.0e+00
Identity = 586/942 (62.21%), Postives = 703/942 (74.63%), Query Frame = 1


Query: 17   CLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGVI---------TEE 76
            CL+A K   WYLDSGCSRHMTGD SK  S   KN G VT+GDN KG I         + +
Sbjct: 537  CLRA-KNLLWYLDSGCSRHMTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQ 596

Query: 77   NLIMMLLKIFVKKMVFPIIFSLQELLNKMVWLKGKIVLC----KNLLDHGNRDENVYTLD 136
             LI  +L +   K     I  L +   K+ +     ++C    K +   G R +N+Y LD
Sbjct: 597  TLIENVLLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLD 656

Query: 137  LNYYPIID--KCLSVFHDDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDA 196
            L +   I   KCL    ++ WLWHRR  H  M  ++ +S+  LV GLP  KF KDK+CDA
Sbjct: 657  LEHSIAISNTKCLITQEENIWLWHRRAAHIHMDHLNKLSRKELVVGLPKLKFGKDKLCDA 716

Query: 197  CQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLM 256
            CQ GKQ K+SFKSKN ISTTRPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ 
Sbjct: 717  CQKGKQVKASFKSKNQISTTRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMF 776

Query: 257  IKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRT 316
            + +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRT
Sbjct: 777  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRT 836

Query: 317  PQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELW 376
            PQQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V N+VL+RP L KTPYE++
Sbjct: 837  PQQNGVVERKNRSLEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 896

Query: 377  HGKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIE 436
            +G+ PNI YF+VFGCKCF+LNN KE+LGKFD+K D  IFLGYS+ SKAYR++NK+TLV+E
Sbjct: 897  NGRKPNISYFRVFGCKCFVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVE 956

Query: 437  ESIHVVFDESWNNVSNESIC---SDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGS 496
            ES+HVVFDES    + ++     +D L++   +   N+K KE           E  +E S
Sbjct: 957  ESVHVVFDESNKQETRQTEIEDLTDLLDQPLLESETNNKPKESESH-------ENTKETS 1016

Query: 497  SSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWI 556
              LPKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP+S  +A  DE W+
Sbjct: 1017 EQLPKEWKTSRDLSIDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWL 1076

Query: 557  LAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEE 616
            +AMQEELNQFERN+VW LVP P++  IIGTKWVFRNK+DE+G IIRNKARLVA+GY QEE
Sbjct: 1077 MAMQEELNQFERNEVWDLVPLPTDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEE 1136

Query: 617  GIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESF 676
            GIDY+ETFAPVAR+EAIR+LLA++S  NF LYQMDVKSAFLNG I EEVYVEQPPGF  F
Sbjct: 1137 GIDYDETFAPVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDF 1196

Query: 677  DLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIY 736
              PNHVYKLKKALYGLKQAPR+WYDRLSKFL+END+  GK+DNTLF+K   ND + VQIY
Sbjct: 1197 KNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYVRGKVDNTLFVKKFKNDTMYVQIY 1256

Query: 737  VDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLL 796
            VDDI+FGSTN+SLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DGIFISQ KY  +LL
Sbjct: 1257 VDDIVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMSDGIFISQSKYCNELL 1316

Query: 797  KKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCA 856
            KKF +   K   TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF VCLCA
Sbjct: 1317 KKFGMEGCKEVATPISNNCNLDLDEKGIVVDNSKYRGIIGSLLYLTASRPDIMFVVCLCA 1376

Query: 857  RFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGT 916
            RFQ+ PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+D+AG  LDRKSTSGT
Sbjct: 1377 RFQANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGT 1436

Query: 917  CQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMK 939
            C  LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMK
Sbjct: 1437 CHLLGSALVSWNSKKQACVALSTAEAEYIAAGSCCAQILWMK 1470

[Close]

BLAST of CSPI07G08510 vs. NCBI nr
Match: gi|1012320158|gb|KYP32982.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 1131.3 bits (2925), Expect = 0.0e+00
Identity = 579/940 (61.60%), Postives = 699/940 (74.36%), Query Frame = 1


Query: 17   CLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGVI---------TEE 76
            CL+A K   WYLDSGCSRHMTGD SK  S   KN G VT+GDN KG I         + +
Sbjct: 506  CLRA-KNLLWYLDSGCSRHMTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQ 565

Query: 77   NLIMMLLKIFVKKMVFPIIFSLQELLNKMVWLKGKIVLC----KNLLDHGNRDENVYTLD 136
             LI  +L +   K     I  L +   K+ +     ++C    K +   G R +N+Y LD
Sbjct: 566  TLIENVLLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLD 625

Query: 137  LNYYPIID--KCLSVFHDDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDA 196
            L +   +   KCL    ++ WLWHRR  H  M  ++ + +  LV GLP  KF KDK+CDA
Sbjct: 626  LEHSITMSNTKCLITQEENIWLWHRRAAHIHMDHLNKLCRKELVVGLPKLKFGKDKLCDA 685

Query: 197  CQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLM 256
            CQ GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ 
Sbjct: 686  CQKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMF 745

Query: 257  IKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRT 316
            + +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRT
Sbjct: 746  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRT 805

Query: 317  PQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELW 376
            PQQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V N+VL+RP L KTPYE++
Sbjct: 806  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 865

Query: 377  HGKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIE 436
             GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SKAYR++NK+TLV+E
Sbjct: 866  KGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVE 925

Query: 437  ESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSL 496
            ES+HVVFDES    + ++   D  E     LL N+       S   V    K++E    L
Sbjct: 926  ESVHVVFDESNKQETRQTEVEDLTELLDQSLLENEPNDVSKESESHV----KQKETCEQL 985

Query: 497  PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAM 556
            PKEW+       D I+G+  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W++AM
Sbjct: 986  PKEWKTTRDLSMDNIIGSIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAM 1045

Query: 557  QEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGID 616
            QEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEEGID
Sbjct: 1046 QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGID 1105

Query: 617  YEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLP 676
            Y+ETFAPVAR+EAIR+LLA+++ +NF LYQMDVKSAFLNG I EEVYVEQPPGF  F  P
Sbjct: 1106 YDETFAPVARIEAIRLLLAYSTIRNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNP 1165

Query: 677  NHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDD 736
            NHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIYVDD
Sbjct: 1166 NHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDTMYVQIYVDD 1225

Query: 737  IIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKF 796
            I+FGSTN SLC+EF+K M  EFEMSMMGEL+FFLGLQ+KQ+ DG FISQ KY  +LLKKF
Sbjct: 1226 IVFGSTNISLCKEFAKTMQGEFEMSMMGELTFFLGLQVKQMHDGTFISQSKYCNELLKKF 1285

Query: 797  KLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQ 856
             +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCARFQ
Sbjct: 1286 GMEGCKEAATPISNNCNLDLDEKGIAVDNSKYRGIIGSLLYLTASRPDIMFAVCLCARFQ 1345

Query: 857  SCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQF 916
            + PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+D+AG  LDRKSTSGTC  
Sbjct: 1346 ANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHL 1405

Query: 917  LGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQ 940
            LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ
Sbjct: 1406 LGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQ 1440

The following BLAST results are available for this feature:

BLAST of CSPI07G08510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLX_TOBAC	2.2e-123	34.58	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
COPIA_DROME	1.6e-76	37.18	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	[more]
YCH4_YEAST	1.7e-35	30.74	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]
M810_ARATH	3.3e-34	36.00	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0...	[more]
YJ41B_YEAST	9.6e-26	26.99	Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of CSPI07G08510 vs. TrEMBL


Match Name	E-value	Identity	Description
A5C8K0_VITVI	0.0e+00	61.85	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001808 PE=4 SV=1	[more]
A0A151UHG7_CAJCA	0.0e+00	61.81	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151RY83_CAJCA	0.0e+00	62.14	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151QSZ9_CAJCA	0.0e+00	62.21	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151QRU6_CAJCA	0.0e+00	61.60	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]

BLAST of CSPI07G08510 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23160.1	1.3e-86	40.33	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.8e-35	36.00	ATMG00810.1 DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	5.8e-21	51.52	ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	1.1e-08	39.47	ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of CSPI07G08510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147834092\|emb\|CAN64335.1\|	0.0e+00	61.85	hypothetical protein VITISV_001808 [Vitis vinifera]	[more]
gi\|1012367548\|gb\|KYP78729.1\|	0.0e+00	61.81	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012336097\|gb\|KYP47407.1\|	0.0e+00	62.14	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012320775\|gb\|KYP33441.1\|	0.0e+00	62.21	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012320158\|gb\|KYP32982.1\|	0.0e+00	61.60	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf
IPR013103	RVT_2
IPR025724	GAG-pre-integrase_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0015074	DNA integration

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G08510.1	CSPI07G08510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 201..316 score: 2.1
IPR001584	Integrase, catalytic core	PROFILE	PS50994	INTEGRASE	coord: 199..365 score: 25
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 202..367 score: 5.5
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 201..374 score: 1.02
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 549..792 score: 1.4
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 119..187 score: 1.1
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 20..941 score:
None	No IPR available	PANTHER	PTHR11439:SF192	SUBFAMILY NOT NAMED	coord: 20..941 score:
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 548..771 score: 7.71E-23coord: 801..931 score: 7.71

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G08510	CsaV3_7G018740	Cucumber (Chinese Long) v3	cpicucB414

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G08510	Cucumber (Chinese Long) v2	cpicuB354