CSPI07G08500 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G08500
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 6323154 .. 6323354 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATTTCATATTTTAGAAACCCCAGCCCGAGGAGGGTCGAAGGAAACCCAGGAACTGAGGAGATGTGCAATGGGGCGCGGTGCAGAGAAGAAAGATTGGAATCATGCAGCGGCGGATTTGGAGGGCTGGAAACACAATACAACGAGTAAGGAGAGAACGAAAGTGACGAGAGAAAGGAAAGGGGAGAAGGAAAAGAGT

mRNA sequence

ATGCAATTTCATATTTTAGAAACCCCAGCCCGAGGAGGGTCGAAGGAAACCCAGGAACTGAGGAGATGTGCAATGGGGCGCGGTGCAGAGAAGAAAGATTGGAATCATGCAGCGGCGGATTTGGAGGGCTGGAAACACAATACAACGAGTAAGGAGAGAACGAAAGTGACGAGAGAAAGGAAAGGGGAGAAGGAAAAGAGT

Coding sequence (CDS)

ATGCAATTTCATATTTTAGAAACCCCAGCCCGAGGAGGGTCGAAGGAAACCCAGGAACTGAGGAGATGTGCAATGGGGCGCGGTGCAGAGAAGAAAGATTGGAATCATGCAGCGGCGGATTTGGAGGGCTGGAAACACAATACAACGAGTAAGGAGAGAACGAAAGTGACGAGAGAAAGGAAAGGGGAGAAGGAAAAGAGT
Homology
[Close]
BLAST of CSPI07G08500 vs. TrEMBL
Match: A0A0A0K553_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G135940 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.6e-29
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 1 

Query: 1  MQFHILETPARGGSKETQELRRCAMGRGAEKKDWNHAAADLEGWKHNTTSKERTKVTRER 60
          MQFHILETPARGGSKETQELRRCAMGRGAEKKDWNHA ADLEGWKHNTTSKERTKVTRER
Sbjct: 1  MQFHILETPARGGSKETQELRRCAMGRGAEKKDWNHAVADLEGWKHNTTSKERTKVTRER 60

Query: 61 KGEKEKS 68
          KGEKEKS
Sbjct: 61 KGEKEKS 67

[Close]
BLAST of CSPI07G08500 vs. NCBI nr
Match: gi|700188816|gb|KGN44049.1| (hypothetical protein Csa_7G135940 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 9.5e-29
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 1 

Query: 1  MQFHILETPARGGSKETQELRRCAMGRGAEKKDWNHAAADLEGWKHNTTSKERTKVTRER 60
          MQFHILETPARGGSKETQELRRCAMGRGAEKKDWNHA ADLEGWKHNTTSKERTKVTRER
Sbjct: 1  MQFHILETPARGGSKETQELRRCAMGRGAEKKDWNHAVADLEGWKHNTTSKERTKVTRER 60

Query: 61 KGEKEKS 68
          KGEKEKS
Sbjct: 61 KGEKEKS 67

The following BLAST results are available for this feature:
BLAST of CSPI07G08500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G08500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K553_CUCSA6.6e-2998.51Uncharacterized protein OS=Cucumis sativus GN=Csa_7G135940 PE=4 SV=1[more]
BLAST of CSPI07G08500 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G08500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188816|gb|KGN44049.1|9.5e-2998.51hypothetical protein Csa_7G135940 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G08500.1CSPI07G08500.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G08500Csa7G135940Cucumber (Chinese Long) v2cpicuB354
CSPI07G08500CsaV3_7G011600Cucumber (Chinese Long) v3cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None