CSPI07G08450 (gene) Wild cucumber (PI 183967)

NameCSPI07G08450
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 6254429 .. 6254653 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAAGCATCCATTTAATTTGGGAAGTATGATTAATGGAGCTCTCCTTGTTTGGAGGACGAACCCCAAGGGCGCAAAGCCTTTCCCGTCTACCATGGAGAAGTTATATTTGAAGTACTCGCCCACCCTCGCAAGATACCTACAAACTCCTATGGCGACAGGTACGTGCAATCTTGTGGGCCTTACTCACATCATAACTCTCTATCAAAACAAGGAAGAAGTG

mRNA sequence

ATGACGAAGCATCCATTTAATTTGGGAAGTATGATTAATGGAGCTCTCCTTGTTTGGAGGACGAACCCCAAGGGCGCAAAGCCTTTCCCGTCTACCATGGAGAAGTTATATTTGAAGTACTCGCCCACCCTCGCAAGATACCTACAAACTCCTATGGCGACAGGTACGTGCAATCTTGTGGGCCTTACTCACATCATAACTCTCTATCAAAACAAGGAAGAAGTG

Coding sequence (CDS)

ATGACGAAGCATCCATTTAATTTGGGAAGTATGATTAATGGAGCTCTCCTTGTTTGGAGGACGAACCCCAAGGGCGCAAAGCCTTTCCCGTCTACCATGGAGAAGTTATATTTGAAGTACTCGCCCACCCTCGCAAGATACCTACAAACTCCTATGGCGACAGGTACGTGCAATCTTGTGGGCCTTACTCACATCATAACTCTCTATCAAAACAAGGAAGAAGTG
BLAST of CSPI07G08450 vs. TrEMBL
Match: A0A0A0KXQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091900 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-15
Identity = 42/52 (80.77%), Postives = 44/52 (84.62%), Query Frame = 1

Query: 1   MTKHPFNLGSMINGALLVWRTNPKGAKPFPSTMEKLYLKYSPTLARYLQTPM 53
           + K PFNL S+INGAL VWR NPKGAKPFPSTMEKL LKY PTLARY QTPM
Sbjct: 133 LMKQPFNLRSIINGALFVWRRNPKGAKPFPSTMEKLCLKYLPTLARYPQTPM 184

BLAST of CSPI07G08450 vs. TrEMBL
Match: A0A0A0L9R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263220 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-07
Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 1

Query: 11 MINGALLVWRTNPKGAKPFPSTMEKLYLKYSPTLARYLQTPMATGTCNLVGLTHIITLYQ 70
          MIN ALL W  +PK  KPFP+ +EKL  KY PT  RY Q  M  G  NL GL  + +++ 
Sbjct: 1  MINRALLGWMKHPKDTKPFPTRVEKLCHKYLPTFVRYPQIEMG-GRVNLAGLNRLRSIHS 60

Query: 71 NKE 74
          NKE
Sbjct: 61 NKE 62

BLAST of CSPI07G08450 vs. NCBI nr
Match: gi|700198466|gb|KGN53624.1| (hypothetical protein Csa_4G091900 [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-15
Identity = 42/52 (80.77%), Postives = 44/52 (84.62%), Query Frame = 1

Query: 1   MTKHPFNLGSMINGALLVWRTNPKGAKPFPSTMEKLYLKYSPTLARYLQTPM 53
           + K PFNL S+INGAL VWR NPKGAKPFPSTMEKL LKY PTLARY QTPM
Sbjct: 133 LMKQPFNLRSIINGALFVWRRNPKGAKPFPSTMEKLCLKYLPTLARYPQTPM 184

BLAST of CSPI07G08450 vs. NCBI nr
Match: gi|700202591|gb|KGN57724.1| (hypothetical protein Csa_3G263220 [Cucumis sativus])

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-07
Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 1

Query: 11 MINGALLVWRTNPKGAKPFPSTMEKLYLKYSPTLARYLQTPMATGTCNLVGLTHIITLYQ 70
          MIN ALL W  +PK  KPFP+ +EKL  KY PT  RY Q  M  G  NL GL  + +++ 
Sbjct: 1  MINRALLGWMKHPKDTKPFPTRVEKLCHKYLPTFVRYPQIEMG-GRVNLAGLNRLRSIHS 60

Query: 71 NKE 74
          NKE
Sbjct: 61 NKE 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KXQ2_CUCSA1.2e-1580.77Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091900 PE=4 SV=1[more]
A0A0A0L9R5_CUCSA2.1e-0750.79Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263220 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700198466|gb|KGN53624.1|1.8e-1580.77hypothetical protein Csa_4G091900 [Cucumis sativus][more]
gi|700202591|gb|KGN57724.1|3.0e-0750.79hypothetical protein Csa_3G263220 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G08450.1CSPI07G08450.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None