CSPI07G08330 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G08330
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationChr7 : 6092900 .. 6094937 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACCTGAAGTAGCCATCCAACTTATGGGTTTTACAAATGCTAAGGACCTATGGGAAGTCACTCGAGATTTGTTTGGAATCCAGTCAAGAGCTGAGGAAGATTTTCTTCGCCAAACATTCCAAACGACGAGGAAATGTAATCTTAAAATGGAAGAGTATTTATGAACTATGAAAAATAATGCCGATAACCTTGGGCAAGCCGGCAGTCCTGTACCTCTGTGTGCTCTTGTTTCACAGGTGTTGTTGGGGTTAGATGAGGTTTACAACCCAATCATCGCTGTAATCCAAGGTAAACCAGACATATCGTGGTTGGATATGCAATCTGAACTTCTCATTTTTTAGAAAAGATTAGAGCATCAGAATAGCCAACGAAACACTGGAAATGCAGTCCGAAATGTCACTATCAATGTAGCTCAGAGGACAAATTCAAACGAACATAAATCCCACAATGGCCAACAATTTTATGGACAGCGAGGAAATTCAAACAATGGCAGAGGACGCGGTCGGGGAAGAGGAAACAAACCCACATGTCAAGTATGCGATAAGTATGATCACTATGCACTTGCTTGTTATAATCAATTTAACAGAGATTTTATGAGTCCTTTAGTTCAAGATCGAGGACAAAACTTGAGTGCATCTGCAAACCCAAATCCTTCTGCCTTTGTGACTACCCAGAGTCCCACTCCGTTTGCTACTTCTGAAACTGTAATTGATCCAAATTGGTATATTGATAGCGGAGCTACAAATCACGTCACGACAAAATCGTTTGGCTTGACCAATCCTACTGAATACTCAGGTAAAGAAAAAGCAACAGTAGGAAATGGAAATAACTTGAATATCTCTTGTGTTGGACATTCTTATTTGACTGATGCAAAACAGTTTTTAGCTCTTAAAAATGTACTTTGTGTTCCTGATATTACAAAGAACTTGGTTAGTGGTTCAAAACTTGCCCAAGATAATCATATATTTCTAGAGTTTCATAATTATTATTGTCTTGTTAAGGACAAAGCTACAGGGGAAATACTGCTGAAAGAAACACTTAAGGATGGTCTATATCACCTGGAAAATGTTGGTTTGATGGTTGCTGCTGAGTTAGAACATAGTACTATCAAGAAACAGCTTATACATAAAAATAAGGAGACATCGACATTTATTTTGTCAGGAGGAAAAAATCTTGTCAGTATCAATGTTGCTGTTTGGCATAAATGTTTAGGCCATCATTCTTCAAAGATTTTGAACACTTTAGTAAAGAAATGTAATGCATGTCAACTGGAAAAAGCACACAACCTCCCCTTTACTATTTCTCAATCTAGAGCTGCTGAATCTTTTGATATTATTTACTCTGATTTGTGGGGTCCTACACCAATTTGCTCATCCGATGGATTCCGTTATTACATAATTTTTGTGGATGATTATAGCAGATATACTTTAGATTTATCTTTTGAGCAGAAAAGTACTGCTATTGATGCTTTTAAGCACTTTATTACATATGTCAAAAACCAATTCAATAAATCCATCAAAGTTTTTCAGTCAGACAATGGGGGAGAGTATAAGAAGATACATCTACTGTGCACTACCTTAGGGATCAATTGGGATGCCCACACCTATTTTACAAGGTATGTCACCTATTGAATTGTTGTTTGCTCACAAATTATATTTTTCTCAATTGAAGGTGTTCGGGTGCTCTTGCTTTCCATGCTTAAGACCTTACCAATCCAATAAGTTTCAACAACGTTCTGAAAAGTGTGTGTTACTTGGCCCAAGCCCAATACACAAGGGGTTCAAGTGTTTGTCCAAGTCGGGCAAAGTGTTTATCTCACGACATGTTCAATTTAACGAGCATGAATTCCCCTTTTCTCAAATGTTCCCTCCAACCCATTTACCGTCGGCCCAATCTAATCCACCTTCTCTTTCCCTTGCCATCCCAATTAACTTCAACTCCATGGCCCAAAACAATTCAATTCCATCGGCCCAATTTTATTCCCACTCCACCCCCATCACAAATTCCTCACAATGTCTCCTCTCATTCACTTGA

mRNA sequence

ATGACACCTGAAGTAGCCATCCAACTTATGGGTTTTACAAATGCTAAGGACCTATGGGAAGTCACTCGAGATTTGTTTGGAATCCAGTCAAGAGCTGAGGAAGATTTTCTTCGCCAAACATTCCAAACGACGAGGAAATCCGGCAGTCCTGTACCTCTGTGTGCTCTTGTTTCACAGGTGTTGTTGGGGTTAGATGAGAAAAGATTAGAGCATCAGAATAGCCAACGAAACACTGGAAATGCAGTCCGAAATGTCACTATCAATGTAGCTCAGAGGACAAATTCAAACGAACATAAATCCCACAATGGCCAACAATTTTATGGACAGCGAGGAAATTCAAACAATGGCAGAGGACGCGGTCGGGGAAGAGGAAACAAACCCACATGTCAAGTATGCGATAAGTATGATCACTATGCACTTGCTTGTTATAATCAATTTAACAGAGATTTTATGAGTCCTTTAGTTCAAGATCGAGGACAAAACTTGAGTGCATCTGCAAACCCAAATCCTTCTGCCTTTGTGACTACCCAGAGTCCCACTCCGTTTGCTACTTCTGAAACTGTAATTGATCCAAATTGGTATATTGATAGCGGAGCTACAAATCACGTCACGACAAAATCGTTTGGCTTGACCAATCCTACTGAATACTCAGGTAAAGAAAAAGCAACAGTAGGAAATGGAAATAACTTGAATATCTCTTGTGTTGGACATTCTTATTTGACTGATGCAAAACAGTTTTTAGCTCTTAAAAATGTACTTTGTGTTCCTGATATTACAAAGAACTTGGTTAGTGGTTCAAAACTTGCCCAAGATAATCATATATTTCTAGAGTTTCATAATTATTATTGTCTTGTTAAGGACAAAGCTACAGGGGAAATACTGCTGAAAGAAACACTTAAGGATGGTCTATATCACCTGGAAAATGTTGGTTTGATGGTTGCTGCTGAGTTAGAACATAGTACTATCAAGAAACAGCTTATACATAAAAATAAGGAGACATCGACATTTATTTTGTCAGGAGGAAAAAATCTTGTCAGTATCAATGTTGCTGTTTGGCATAAATGTTTAGGCCATCATTCTTCAAAGATTTTGAACACTTTAGTAAAGAAATGTAATGCATGTCAACTGGAAAAAGCACACAACCTCCCCTTTACTATTTCTCAATCTAGAGCTGCTGAATCTTTTGATATTATTTACTCTGATTTGTGGGGTCCTACACCAATTTGCTCATCCGATGGATTCCGTTATTACATAATTTTTGTGGATGATTATAGCAGATATACTTTAGATTTATCTTTTGAGCAGAAAAGTACTGCTATTGATGCTTTTAAGCACTTTATTACATATGTCAAAAACCAATTCAATAAATCCATCAAAGTTTTTCAGTCAGACAATGGGGGAGAGTATAAGAAGATACATCTACTGTGCACTACCTTAGGGATCAATTGGGATGCCCACACCTATTTTACAAGACCTTACCAATCCAATAAGTTTCAACAACGTTCTGAAAAGTGTGTGTTACTTGGCCCAAGCCCAATACACAAGGGGTTCAAGTGTTTGTCCAAGTCGGGCAAAGTGTTTATCTCACGACATGTTCAATTTAACGAGCATGAATTCCCCTTTTCTCAAATGTTCCCTCCAACCCATTTACCGTCGGCCCAATCTAATCCACCTTCTCTTTCCCTTGCCATCCCAATTAACTTCAACTCCATGGCCCAAAACAATTCAATTCCATCGGCCCAATTTTATTCCCACTCCACCCCCATCACAAATTCCTCACAATGTCTCCTCTCATTCACTTGA

Coding sequence (CDS)

ATGACACCTGAAGTAGCCATCCAACTTATGGGTTTTACAAATGCTAAGGACCTATGGGAAGTCACTCGAGATTTGTTTGGAATCCAGTCAAGAGCTGAGGAAGATTTTCTTCGCCAAACATTCCAAACGACGAGGAAATCCGGCAGTCCTGTACCTCTGTGTGCTCTTGTTTCACAGGTGTTGTTGGGGTTAGATGAGAAAAGATTAGAGCATCAGAATAGCCAACGAAACACTGGAAATGCAGTCCGAAATGTCACTATCAATGTAGCTCAGAGGACAAATTCAAACGAACATAAATCCCACAATGGCCAACAATTTTATGGACAGCGAGGAAATTCAAACAATGGCAGAGGACGCGGTCGGGGAAGAGGAAACAAACCCACATGTCAAGTATGCGATAAGTATGATCACTATGCACTTGCTTGTTATAATCAATTTAACAGAGATTTTATGAGTCCTTTAGTTCAAGATCGAGGACAAAACTTGAGTGCATCTGCAAACCCAAATCCTTCTGCCTTTGTGACTACCCAGAGTCCCACTCCGTTTGCTACTTCTGAAACTGTAATTGATCCAAATTGGTATATTGATAGCGGAGCTACAAATCACGTCACGACAAAATCGTTTGGCTTGACCAATCCTACTGAATACTCAGGTAAAGAAAAAGCAACAGTAGGAAATGGAAATAACTTGAATATCTCTTGTGTTGGACATTCTTATTTGACTGATGCAAAACAGTTTTTAGCTCTTAAAAATGTACTTTGTGTTCCTGATATTACAAAGAACTTGGTTAGTGGTTCAAAACTTGCCCAAGATAATCATATATTTCTAGAGTTTCATAATTATTATTGTCTTGTTAAGGACAAAGCTACAGGGGAAATACTGCTGAAAGAAACACTTAAGGATGGTCTATATCACCTGGAAAATGTTGGTTTGATGGTTGCTGCTGAGTTAGAACATAGTACTATCAAGAAACAGCTTATACATAAAAATAAGGAGACATCGACATTTATTTTGTCAGGAGGAAAAAATCTTGTCAGTATCAATGTTGCTGTTTGGCATAAATGTTTAGGCCATCATTCTTCAAAGATTTTGAACACTTTAGTAAAGAAATGTAATGCATGTCAACTGGAAAAAGCACACAACCTCCCCTTTACTATTTCTCAATCTAGAGCTGCTGAATCTTTTGATATTATTTACTCTGATTTGTGGGGTCCTACACCAATTTGCTCATCCGATGGATTCCGTTATTACATAATTTTTGTGGATGATTATAGCAGATATACTTTAGATTTATCTTTTGAGCAGAAAAGTACTGCTATTGATGCTTTTAAGCACTTTATTACATATGTCAAAAACCAATTCAATAAATCCATCAAAGTTTTTCAGTCAGACAATGGGGGAGAGTATAAGAAGATACATCTACTGTGCACTACCTTAGGGATCAATTGGGATGCCCACACCTATTTTACAAGACCTTACCAATCCAATAAGTTTCAACAACGTTCTGAAAAGTGTGTGTTACTTGGCCCAAGCCCAATACACAAGGGGTTCAAGTGTTTGTCCAAGTCGGGCAAAGTGTTTATCTCACGACATGTTCAATTTAACGAGCATGAATTCCCCTTTTCTCAAATGTTCCCTCCAACCCATTTACCGTCGGCCCAATCTAATCCACCTTCTCTTTCCCTTGCCATCCCAATTAACTTCAACTCCATGGCCCAAAACAATTCAATTCCATCGGCCCAATTTTATTCCCACTCCACCCCCATCACAAATTCCTCACAATGTCTCCTCTCATTCACTTGA
Homology
[Close]
BLAST of CSPI07G08330 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.4e-22
Identity = 106/409 (25.92%), Postives = 167/409 (40.83%), Query Frame = 1 

Query: 109 QRGNSNNGRGRGRGRGNKPT------CQVCDKYDHYALACYN----------QFNRDFMS 168
           QR ++N GR   RG+    +      C  C++  H+   C N          Q N D  +
Sbjct: 206 QRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTA 265

Query: 169 PLVQDRGQNLSASANPNPSAFVTTQSPTPFATSETVIDPNWYIDSGATNHVTTKSFGLTN 228
            +VQ+         N N   F+  +      +     +  W +D+ A++H T        
Sbjct: 266 AMVQN---------NDNVVLFINEEEECMHLSGP---ESEWVVDTAASHHATPVRDLFCR 325

Query: 229 PTEYSGKEKATV--GNGNNLNISCVGHSYL-TDAKQFLALKNVLCVPDITKNLVSGSKLA 288
              Y   +  TV  GN +   I+ +G   + T+    L LK+V  VPD+  NL+SG  L 
Sbjct: 326 ---YVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALD 385

Query: 289 QDNHIFLEFHNYYCLVKDKATGEILLKETLKDGLYHLENVGLMVAAELEHSTIKKQLIHK 348
           +D      + +Y+   K                 + L    L++A  +   T+ +     
Sbjct: 386 RDG-----YESYFANQK-----------------WRLTKGSLVIAKGVARGTLYR----- 445

Query: 349 NKETSTFILSGGKNLVS--INVAVWHKCLGHHSSKILNTLVKK-------------CNAC 408
              T+  I  G  N     I+V +WHK +GH S K L  L KK             C+ C
Sbjct: 446 ---TNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYC 505

Query: 409 QLEKAHNLPFTISQSRAAESFDIIYSDLWGPTPICSSDGFRYYIIFVDDYSRYTLDLSFE 468
              K H + F  S  R     D++YSD+ GP  I S  G +Y++ F+DD SR       +
Sbjct: 506 LFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILK 565

Query: 469 QKSTAIDAFKHFITYVKNQFNKSIKVFQSDNGGEY--KKIHLLCTTLGI 482
            K      F+ F   V+ +  + +K  +SDNGGEY  ++    C++ GI
Sbjct: 566 TKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGI 569

[Close]
BLAST of CSPI07G08330 vs. Swiss-Prot
Match: YG22B_YEAST (Transposon Ty2-GR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-GR2 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.7e-09
Identity = 68/320 (21.25%), Postives = 132/320 (41.25%), Query Frame = 1 

Query: 179 PTPFATSETVIDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLNISCVGHS 238
           PT    S   +  +  IDSGA+  +   +  L + T  S +         ++ I+ +G+ 
Sbjct: 440 PTHTIDSNDELPDHLLIDSGASQTLVRSAHYLHHATPNS-EINIVDAQKQDIPINAIGNL 499

Query: 239 YLTDAKQFLALKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKATGEILLKET 298
           +             L  P+I  +L+S S+LA  N       N      +++ G +L    
Sbjct: 500 HFNFQNGTKTSIKALHTPNIAYDLLSLSELANQNITACFTRN----TLERSDGTVLAP-I 559

Query: 299 LKDGLYHLENVGLMVAAELEHSTIKKQLIHKNKETSTFI------LSGGKNLVSINVAVW 358
           +K G ++  +   ++ + +   TI    ++K+K  + +       + G  N  SI  ++ 
Sbjct: 560 VKHGDFYWLSKKYLIPSHISKLTINN--VNKSKSVNKYPYPLIHRMLGHANFRSIQKSLK 619

Query: 359 HKCLGHHSSKIL---NTLVKKCNACQLEKA----HNLPFTISQSRAAESFDIIYSDLWGP 418
              + +     +   N    +C  C + K+    H     +    + E F  +++D++GP
Sbjct: 620 KNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGP 679

Query: 419 TPICSSDGFRYYIIFVDDYSRY--TLDLSFEQKSTAIDAFKHFITYVKNQFNKSIKVFQS 478
                     Y+I F D+ +R+     L   ++ + ++ F   + ++KNQFN  + V Q 
Sbjct: 680 VHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQM 739

Query: 479 DNGGEY--KKIHLLCTTLGI 482
           D G EY  K +H   T  GI
Sbjct: 740 DRGSEYTNKTLHKFFTNRGI 751

[Close]
BLAST of CSPI07G08330 vs. Swiss-Prot
Match: YG21B_YEAST (Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-GR1 PE=5 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 6.7e-09
Identity = 68/320 (21.25%), Postives = 132/320 (41.25%), Query Frame = 1 

Query: 179 PTPFATSETVIDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLNISCVGHS 238
           PT    S   +  +  IDSGA+  +   +  L + T  S +         ++ I+ +G+ 
Sbjct: 440 PTHTIDSNDELPDHLLIDSGASQTLVRSAHYLHHATPNS-EINIVDAQKQDIPINAIGNL 499

Query: 239 YLTDAKQFLALKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKATGEILLKET 298
           +             L  P+I  +L+S S+LA  N       N      +++ G +L    
Sbjct: 500 HFNFQNGTKTSIKALHTPNIAYDLLSLSELANQNITACFTRN----TLERSDGTVLAP-I 559

Query: 299 LKDGLYHLENVGLMVAAELEHSTIKKQLIHKNKETSTFI------LSGGKNLVSINVAVW 358
           +K G ++  +   ++ + +   TI    ++K+K  + +       + G  N  SI  ++ 
Sbjct: 560 VKHGDFYWLSKKYLIPSHISKLTINN--VNKSKSVNKYPYPLIHRMLGHANFRSIQKSLK 619

Query: 359 HKCLGHHSSKIL---NTLVKKCNACQLEKA----HNLPFTISQSRAAESFDIIYSDLWGP 418
              + +     +   N    +C  C + K+    H     +    + E F  +++D++GP
Sbjct: 620 KNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGP 679

Query: 419 TPICSSDGFRYYIIFVDDYSRY--TLDLSFEQKSTAIDAFKHFITYVKNQFNKSIKVFQS 478
                     Y+I F D+ +R+     L   ++ + ++ F   + ++KNQFN  + V Q 
Sbjct: 680 VHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQM 739

Query: 479 DNGGEY--KKIHLLCTTLGI 482
           D G EY  K +H   T  GI
Sbjct: 740 DRGSEYTNKTLHKFFTNRGI 751

[Close]
BLAST of CSPI07G08330 vs. Swiss-Prot
Match: YO21B_YEAST (Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-OR1 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.7e-09
Identity = 68/320 (21.25%), Postives = 132/320 (41.25%), Query Frame = 1 

Query: 179 PTPFATSETVIDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLNISCVGHS 238
           PT    S   +  +  IDSGA+  +   +  L + T  S +         ++ I+ +G+ 
Sbjct: 440 PTRTIDSNDELPDHLLIDSGASQTLVRSAHYLHHATPNS-EINIVDAQKQDIPINAIGNL 499

Query: 239 YLTDAKQFLALKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKATGEILLKET 298
           +             L  P+I  +L+S S+LA  N       N      +++ G +L    
Sbjct: 500 HFNFQNGTKTSIKALHTPNIAYDLLSLSELANQNITACFTRN----TLERSDGTVLAP-I 559

Query: 299 LKDGLYHLENVGLMVAAELEHSTIKKQLIHKNKETSTFI------LSGGKNLVSINVAVW 358
           +K G ++  +   ++ + +   TI    ++K+K  + +       + G  N  SI  ++ 
Sbjct: 560 VKHGDFYWLSKKYLIPSHISKLTINN--VNKSKSVNKYPYPLIHRMLGHANFRSIQKSLK 619

Query: 359 HKCLGHHSSKIL---NTLVKKCNACQLEKA----HNLPFTISQSRAAESFDIIYSDLWGP 418
              + +     +   N    +C  C + K+    H     +    + E F  +++D++GP
Sbjct: 620 KNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGP 679

Query: 419 TPICSSDGFRYYIIFVDDYSRY--TLDLSFEQKSTAIDAFKHFITYVKNQFNKSIKVFQS 478
                     Y+I F D+ +R+     L   ++ + ++ F   + ++KNQFN  + V Q 
Sbjct: 680 VHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQM 739

Query: 479 DNGGEY--KKIHLLCTTLGI 482
           D G EY  K +H   T  GI
Sbjct: 740 DRGSEYTNKTLHKFFTNRGI 751

[Close]
BLAST of CSPI07G08330 vs. Swiss-Prot
Match: YD22B_YEAST (Transposon Ty2-DR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-DR2 PE=3 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 6.7e-09
Identity = 68/320 (21.25%), Postives = 132/320 (41.25%), Query Frame = 1 

Query: 179 PTPFATSETVIDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLNISCVGHS 238
           PT    S   +  +  IDSGA+  +   +  L + T  S +         ++ I+ +G+ 
Sbjct: 440 PTRTIDSNDELPDHLLIDSGASQTLVRSAHYLHHATPNS-EINIVDAQKQDIPINAIGNL 499

Query: 239 YLTDAKQFLALKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKATGEILLKET 298
           +             L  P+I  +L+S S+LA  N       N      +++ G +L    
Sbjct: 500 HFNFQNGTKTSIKALHTPNIAYDLLSLSELANQNITACFTRN----TLERSDGTVLAP-I 559

Query: 299 LKDGLYHLENVGLMVAAELEHSTIKKQLIHKNKETSTFI------LSGGKNLVSINVAVW 358
           +K G ++  +   ++ + +   TI    ++K+K  + +       + G  N  SI  ++ 
Sbjct: 560 VKHGDFYWLSKKYLIPSHISKLTINN--VNKSKSVNKYPYPLIHRMLGHANFRSIQKSLK 619

Query: 359 HKCLGHHSSKIL---NTLVKKCNACQLEKA----HNLPFTISQSRAAESFDIIYSDLWGP 418
              + +     +   N    +C  C + K+    H     +    + E F  +++D++GP
Sbjct: 620 KNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGP 679

Query: 419 TPICSSDGFRYYIIFVDDYSRY--TLDLSFEQKSTAIDAFKHFITYVKNQFNKSIKVFQS 478
                     Y+I F D+ +R+     L   ++ + ++ F   + ++KNQFN  + V Q 
Sbjct: 680 VHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQM 739

Query: 479 DNGGEY--KKIHLLCTTLGI 482
           D G EY  K +H   T  GI
Sbjct: 740 DRGSEYTNKTLHKFFTNRGI 751

[Close]
BLAST of CSPI07G08330 vs. TrEMBL
Match: A0A151S6M8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_027809 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.1e-78
Identity = 218/618 (35.28%), Postives = 295/618 (47.73%), Query Frame = 1 

Query: 1   MTPEVAIQLMGFTNAKDLWEVTRDLFGIQSRAEEDFLRQTFQTTRK-------------- 60
           MT EVA QL+    ++ +WE  + L G  +R+   FL+  F  TRK              
Sbjct: 1   MTQEVATQLLHCETSQQIWEDAQSLAGAHTRSRITFLKTEFHRTRKGGLKMEEYLTKMKE 60

Query: 61  -------SGSPVPLCALVSQVLLGLD----------------------------EKRLEH 120
                  +GS V    LV+Q L GLD                            E RLE 
Sbjct: 61  IADDLALAGSSVSTMDLVTQTLAGLDNEYNPIVVQLSDKEHLTWVEMQAQLLTYENRLEQ 120

Query: 121 QNSQRN-TGNAVRNV-TINVAQRTNSNEHKSHNGQQFY-GQRGNSNNGRGRGRGRGNKPT 180
            N+Q N T N   N+ TI   +R  SN      G Q   G RG    GRGRGR   ++  
Sbjct: 121 INNQSNLTLNPSSNISTILYNRRGKSNAFGGGRGGQINRGARG----GRGRGRATKDRIV 180

Query: 181 CQVCDKYDHYALACYNQFNRDFMSPLVQDRGQNLSASANPNPSAFVTTQSPTPFATSETV 240
           CQVC K  H A  CY++FN++++     ++        N N +A+V + S        TV
Sbjct: 181 CQVCCKPGHAASHCYHRFNKNYIGQNSDEQKSEKDKEQNYNFNAYVASPS--------TV 240

Query: 241 IDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLNISCVGHSYLTDAKQFLA 300
            D +WY DSGA+NHVT     +    E  GK   TVGNG NL I   G S L   ++ L 
Sbjct: 241 EDLDWYFDSGASNHVTYDQNKVQEVNENDGKSFLTVGNGANLKIIACGDSSLDTQQKSLN 300

Query: 301 LKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKATGEILLKETLKDGLYHLEN 360
           LK++L VP ITKNL+S SKL  DN I++EFH+  C VKDK TG ILL+  +KDGLY L  
Sbjct: 301 LKDILYVPKITKNLLSISKLTFDNDIYVEFHDVACFVKDKLTGRILLEGKIKDGLYQLPG 360

Query: 361 VGLMVAAELEHSTIKK-QLIHKNKETSTFILSGGKNLVSINVAVWHKCLGHHSSKILNTL 420
                      ST K+  +    KET                  WH+ LGH +SK+LN +
Sbjct: 361 GST--------STNKRPHVFFSIKET------------------WHRKLGHPNSKVLNEV 420

Query: 421 VKKCN-------------ACQLEKAHNLPFTISQSRAAESFDIIYSDLWGPTPICSSDGF 480
           +K CN             ACQ  KAHNLPF  S S A E  D+++SD+WGP PI S  GF
Sbjct: 421 MKLCNIEASPCENFEFCEACQFGKAHNLPFQNSVSCAKEPLDLVHSDVWGPAPISSVSGF 480

Query: 481 RYYIIFVDDYSRYTLDLSFEQKSTAIDAFKHFITYVKNQFNKSIKVFQSDNGGEYKKIHL 540
           +YY++F+DD+SR+T     +QKS    AF  F   V+NQFNK IK  Q D GGE+K +  
Sbjct: 481 KYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQFNKRIKTLQCDGGGEFKSLSK 540

Query: 541 LCTTLGINWDAHTYFTRPYQSNKFQQRSEKCVLLG-------PSPIHKGFKCLSKSGKVF 546
           +    GI       +T   Q+ + +++    V  G         P+H  ++  S +  + 
Sbjct: 541 VLIKTGIQLRESCPYTSA-QNGRAERKHRHVVESGLTLLAQAKMPLHYWWEAFSTAVFLI 579

[Close]
BLAST of CSPI07G08330 vs. TrEMBL
Match: A0A151U9E7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_020152 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.6e-57
Identity = 154/446 (34.53%), Postives = 229/446 (51.35%), Query Frame = 1 

Query: 61  LLGLDEKRLEHQNSQRNT---GNAVRNVTINVAQRTNSNEHKSHNGQQFYGQRGNSNNGR 120
           LL   E+RLE   +  +     N  +    +  Q TN     ++NG    G     + GR
Sbjct: 201 LLMAQEERLEKHKASESVPLQANLAQGSFNSRKQFTNQGRGSNNNGTHGRGP----HRGR 260

Query: 121 GRGR-----GRGNKPTCQVCDKYDHYALACYNQFNRDFMSPLVQDRGQNLSASANP-NPS 180
           GRGR     GRGNK  CQVC K  H A  C++++++ +  P       NL+ + N  NP 
Sbjct: 261 GRGRSAQHFGRGNKQPCQVCGKIGHIAFHCWHRYDQQYTEP-------NLNHNTNVYNPG 320

Query: 181 AFVTTQSPTPFATSETVIDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLN 240
                Q+     +   V D  WY DSGATNH+T+    L + T+Y+G++K  +GNG  + 
Sbjct: 321 NQQQMQAMIA-GSQNMVYDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDKIHMGNGQAIG 380

Query: 241 ISCVGHSYLTD--AKQFLALKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKA 300
           I+  G S+     + +   LK +L VP ITKNL+S SK  +DN++++EFH  YCLVK + 
Sbjct: 381 INHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFHTNYCLVKSQD 440

Query: 301 TGEILLKETLKDGLYHLENVGLMVAAELEHSTIKKQLIHKNKETSTFILSGGKNLVSINV 360
           + E LL+  LK+GLY  + V ++     EH+      +  N+ T+ ++    K+      
Sbjct: 441 SKETLLRGNLKNGLYVFDEVQILKPDVYEHTV---DSVPTNR-TTLYVQRTRKSY----- 500

Query: 361 AVWHKCLGHHSSKILNTLVKKCN--------------ACQLEKAHNLPFTISQSRAAESF 420
            VWH  L H S KI+  ++K CN              +C + K+H LPF+ S +      
Sbjct: 501 DVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSPL 560

Query: 421 DIIYSDLWGPTPICSSDGFRYYIIFVDDYSRYTLDLSFEQKSTAIDAFKHFITYVKNQFN 480
           +++YSD+WGP+   S +GFRYY+ F D +S+YT       KS     F HF + V+NQF 
Sbjct: 561 ELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQFG 620

Query: 481 KSIKVFQSDNGGEYKKIHLLCTTLGI 482
             IK+FQSD G E+  +  L    GI
Sbjct: 621 HKIKMFQSDGGKEFTCLTKLFNENGI 625

[Close]
BLAST of CSPI07G08330 vs. TrEMBL
Match: A0A151SEF4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_024838 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.6e-57
Identity = 154/446 (34.53%), Postives = 229/446 (51.35%), Query Frame = 1 

Query: 61  LLGLDEKRLEHQNSQRNT---GNAVRNVTINVAQRTNSNEHKSHNGQQFYGQRGNSNNGR 120
           LL   E+RLE   +  +     N  +    +  Q TN     ++NG    G     + GR
Sbjct: 67  LLMAQEERLEKHKASESVPLQANLAQGSFNSRKQFTNQGRGSNNNGTHGRGP----HRGR 126

Query: 121 GRGR-----GRGNKPTCQVCDKYDHYALACYNQFNRDFMSPLVQDRGQNLSASANP-NPS 180
           GRGR     GRGNK  CQVC K  H A  C++++++ +  P       NL+ + N  NP 
Sbjct: 127 GRGRSAQHFGRGNKQPCQVCGKIGHIAFHCWHRYDQQYTEP-------NLNHNTNVYNPG 186

Query: 181 AFVTTQSPTPFATSETVIDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLN 240
                Q+     +   V D  WY DSGATNH+T+    L + T+Y+G++K  +GNG  + 
Sbjct: 187 NQQQMQAMIA-GSQNMVYDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDKIHMGNGQAIG 246

Query: 241 ISCVGHSYLTD--AKQFLALKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKA 300
           I+  G S+     + +   LK +L VP ITKNL+S SK  +DN++++EFH  YCLVK + 
Sbjct: 247 INHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFHTNYCLVKSQD 306

Query: 301 TGEILLKETLKDGLYHLENVGLMVAAELEHSTIKKQLIHKNKETSTFILSGGKNLVSINV 360
           + E LL+  LK+GLY  + V ++     EH+      +  N+ T+ ++    K+      
Sbjct: 307 SKETLLRGNLKNGLYVFDEVQILKPDVYEHTV---DSVPTNR-TTLYVQRTRKSY----- 366

Query: 361 AVWHKCLGHHSSKILNTLVKKCN--------------ACQLEKAHNLPFTISQSRAAESF 420
            VWH  L H S KI+  ++K CN              +C + K+H LPF+ S +      
Sbjct: 367 DVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSPL 426

Query: 421 DIIYSDLWGPTPICSSDGFRYYIIFVDDYSRYTLDLSFEQKSTAIDAFKHFITYVKNQFN 480
           +++YSD+WGP+   S +GFRYY+ F D +S+YT       KS     F HF + V+NQF 
Sbjct: 427 ELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQFG 486

Query: 481 KSIKVFQSDNGGEYKKIHLLCTTLGI 482
             IK+FQSD G E+  +  L    GI
Sbjct: 487 HKIKMFQSDGGKEFTCLTKLFNENGI 491

[Close]
BLAST of CSPI07G08330 vs. TrEMBL
Match: A5BUG6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005638 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 7.9e-57
Identity = 171/579 (29.53%), Postives = 263/579 (45.42%), Query Frame = 1 

Query: 8   QLMGFTNAKDLWEVTRDLFGIQSRAEEDFLRQTFQTTRKS-------------------- 67
           Q++G  ++   W      F   SRA    LR   Q+T+K                     
Sbjct: 3   QIIGHNSSHSAWNALEKTFSSSSRARIMQLRLELQSTKKGSLSMIDYIMKVKGAADSLAA 62

Query: 68  -GSPVPLCALVSQVLLGL--------------DEK-----------RLEHQNSQRNTGNA 127
            G PV     V  +L GL              D+K             EH+  Q+++   
Sbjct: 63  IGEPVSEQDQVMNLLGGLGSDYNAVVTAINIKDDKISIEVVHSMLLAFEHRLEQQSSIEQ 122

Query: 128 VRNVTINVAQRTNSN-EHKSHNGQQFYGQRGNSNNGRGRGRGRGN--------------K 187
             +++ N A  +NS    + +NG +      N +N   RGRGRG               K
Sbjct: 123 FSSISANYASSSNSRGSGRRYNGGRGQNHTPNISNYTYRGRGRGGRYGQNGRHNSNSSEK 182

Query: 188 PTCQVCDKYDHYALACYNQFNRDFMSPLVQDRGQNLSASANPNPSAFVTTQSPTPFATSE 247
           P CQ+C K+ H    CY++F+  + S     +  N S S   NP++      P   A+S 
Sbjct: 183 PQCQLCGKFGHTVQICYHKFDISYQS----SQSSNTSPSNASNPNSI-----PAMVASSN 242

Query: 248 TVIDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLNISCVG-HSYLTDAKQ 307
            + +  WY+DSGA +H+T     LT+ + Y+G +K T+GNG +L+IS  G H  L+D++ 
Sbjct: 243 NLAEDTWYLDSGANHHLTQSVGNLTSSSPYTGIDKVTIGNGKHLSISNTGSHRLLSDSRS 302

Query: 308 FLALKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKATGEILLKETLKDGLYH 367
           F  LK V  V  I+ NL+S +K   DN+   EF +    VKD  T ++L +  L++GLY 
Sbjct: 303 F-HLKKVFHVHFISANLISVAKFYLDNNALFEFRSNSFFVKDLHTKKVLAQGKLENGLYR 362

Query: 368 LENVGLMVAAELEHSTIKKQLIHKNKETSTFILSGGKNLVSINVAVWHKCLGHHSSKILN 427
              +              K++       S+   S   ++    V +WH  LGH S+ I+ 
Sbjct: 363 FPVLN------------SKKVAFVGAINSSTFYSHNSSIFDNKVKLWHHRLGHASTNIVT 422

Query: 428 TLVKKCN--------------------ACQLEKAHNLPFTISQSRAAESFDIIYSDLWGP 487
            +++ CN                    +CQL K+H LP  +S S A++  +++++DLWGP
Sbjct: 423 QIMQSCNVSFEKNKNTVCSTVCSTVCSSCQLAKSHRLPTHLSLSCASKPLELVHTDLWGP 482

Query: 488 TPICSSDGFRYYIIFVDDYSRYTLDLSFEQKSTAIDAFKHFITYVKNQFNKSIKVFQSDN 505
             + S+ G RY+I+F+DDYSRYT     + K  A+ AFK F   V+NQF+  IK  QSDN
Sbjct: 483 ASVKSTSGARYFILFLDDYSRYTWFYPLQTKDQALPAFKKFKLQVENQFDAKIKCLQSDN 542

[Close]
BLAST of CSPI07G08330 vs. TrEMBL
Match: A5BFT3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017741 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.0e-56
Identity = 162/484 (33.47%), Postives = 232/484 (47.93%), Query Frame = 1 

Query: 59  QVLLGLDEKRLEHQNSQRNTGNAVRNVTINVAQRTN--------SNEHKSHNGQQ----- 118
           + LL   E R+E  N+  ++  +    + N  ++ N        +N   SH+G       
Sbjct: 196 EALLMAHESRVEKNNNSLDSSPSAHVASSNAVEKGNRFKQDYYAANSQGSHSGYNGGFGR 255

Query: 119 ---------FYGQRG-----NSNNGRGRGRGRGNK-----------------PTCQVCDK 178
                    FYG RG     N  + RG  RGRGNK                 P CQ+C K
Sbjct: 256 GGDFGRRGGFYGGRGFNWNYNGRSNRGGFRGRGNKGSFQARPPWNSDNQNEKPACQLCGK 315

Query: 179 YDHYALACYNQFNRDFMSPLVQDRGQNLSASANPNPSAFVT--TQSPTPFATSETVIDPN 238
             H    CY +F+  F  P      QNLS S N +P A+ +   Q      TSE   D N
Sbjct: 316 IGHVVAQCYYRFDHTFQVP------QNLS-SRNSSPRAYYSFSPQVNGVIPTSEVFSDDN 375

Query: 239 WYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLNISCVGHSYLTD--AKQFLALK 298
           WY DSGA+NHVT     L    E++G+ +  VGNG  L+I  +G S      + + L L 
Sbjct: 376 WYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSPFSSKPLLLN 435

Query: 299 NVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKATGEILLKETLKDGLYHLENVG 358
           ++L VP ITKNL+S SK A+DN +F EFH+  C VKD+ T  +L+   ++DGLY  ++  
Sbjct: 436 HLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKVRDGLYAFDSSH 495

Query: 359 LMVAAELEHSTIKKQLIHKNKETSTFILSGGKNLVSINVAVWHKCLGHHSSKILNTLVKK 418
           L  A     S  K   +  +  +S    +     +S    +WHK LGH S+  +  ++ K
Sbjct: 496 L--ALRPTQSLSKSPSVVASSFSSKVCTTS----LSSTFDLWHKRLGHPSAATIKNVLSK 555

Query: 419 CN-------------ACQLEKAHNLPFTISQSRAAESFDIIYSDLWGPTPICSSDGFRYY 478
           CN             +C L K H  PF++S +   +  ++I+ DLWGPT + S+ G+RYY
Sbjct: 556 CNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYY 615

Query: 479 IIFVDDYSRYTLDLSFEQKSTAIDAFKHFITYVKNQFNKSIKVFQSDNGGEYKKIHLLCT 482
           I FVD +SR++       KS AI  F +F T V+ QF+  IK  Q+D GGE++       
Sbjct: 616 IHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLA 666

[Close]
BLAST of CSPI07G08330 vs. NCBI nr
Match: gi|1012339207|gb|KYP50444.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 301.6 bits (771), Expect = 3.1e-78
Identity = 218/618 (35.28%), Postives = 295/618 (47.73%), Query Frame = 1 

Query: 1   MTPEVAIQLMGFTNAKDLWEVTRDLFGIQSRAEEDFLRQTFQTTRK-------------- 60
           MT EVA QL+    ++ +WE  + L G  +R+   FL+  F  TRK              
Sbjct: 1   MTQEVATQLLHCETSQQIWEDAQSLAGAHTRSRITFLKTEFHRTRKGGLKMEEYLTKMKE 60

Query: 61  -------SGSPVPLCALVSQVLLGLD----------------------------EKRLEH 120
                  +GS V    LV+Q L GLD                            E RLE 
Sbjct: 61  IADDLALAGSSVSTMDLVTQTLAGLDNEYNPIVVQLSDKEHLTWVEMQAQLLTYENRLEQ 120

Query: 121 QNSQRN-TGNAVRNV-TINVAQRTNSNEHKSHNGQQFY-GQRGNSNNGRGRGRGRGNKPT 180
            N+Q N T N   N+ TI   +R  SN      G Q   G RG    GRGRGR   ++  
Sbjct: 121 INNQSNLTLNPSSNISTILYNRRGKSNAFGGGRGGQINRGARG----GRGRGRATKDRIV 180

Query: 181 CQVCDKYDHYALACYNQFNRDFMSPLVQDRGQNLSASANPNPSAFVTTQSPTPFATSETV 240
           CQVC K  H A  CY++FN++++     ++        N N +A+V + S        TV
Sbjct: 181 CQVCCKPGHAASHCYHRFNKNYIGQNSDEQKSEKDKEQNYNFNAYVASPS--------TV 240

Query: 241 IDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLNISCVGHSYLTDAKQFLA 300
            D +WY DSGA+NHVT     +    E  GK   TVGNG NL I   G S L   ++ L 
Sbjct: 241 EDLDWYFDSGASNHVTYDQNKVQEVNENDGKSFLTVGNGANLKIIACGDSSLDTQQKSLN 300

Query: 301 LKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKATGEILLKETLKDGLYHLEN 360
           LK++L VP ITKNL+S SKL  DN I++EFH+  C VKDK TG ILL+  +KDGLY L  
Sbjct: 301 LKDILYVPKITKNLLSISKLTFDNDIYVEFHDVACFVKDKLTGRILLEGKIKDGLYQLPG 360

Query: 361 VGLMVAAELEHSTIKK-QLIHKNKETSTFILSGGKNLVSINVAVWHKCLGHHSSKILNTL 420
                      ST K+  +    KET                  WH+ LGH +SK+LN +
Sbjct: 361 GST--------STNKRPHVFFSIKET------------------WHRKLGHPNSKVLNEV 420

Query: 421 VKKCN-------------ACQLEKAHNLPFTISQSRAAESFDIIYSDLWGPTPICSSDGF 480
           +K CN             ACQ  KAHNLPF  S S A E  D+++SD+WGP PI S  GF
Sbjct: 421 MKLCNIEASPCENFEFCEACQFGKAHNLPFQNSVSCAKEPLDLVHSDVWGPAPISSVSGF 480

Query: 481 RYYIIFVDDYSRYTLDLSFEQKSTAIDAFKHFITYVKNQFNKSIKVFQSDNGGEYKKIHL 540
           +YY++F+DD+SR+T     +QKS    AF  F   V+NQFNK IK  Q D GGE+K +  
Sbjct: 481 KYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQFNKRIKTLQCDGGGEFKSLSK 540

Query: 541 LCTTLGINWDAHTYFTRPYQSNKFQQRSEKCVLLG-------PSPIHKGFKCLSKSGKVF 546
           +    GI       +T   Q+ + +++    V  G         P+H  ++  S +  + 
Sbjct: 541 VLIKTGIQLRESCPYTSA-QNGRAERKHRHVVESGLTLLAQAKMPLHYWWEAFSTAVFLI 579

[Close]
BLAST of CSPI07G08330 vs. NCBI nr
Match: gi|147816383|emb|CAN68489.1| (hypothetical protein VITISV_037543 [Vitis vinifera])

HSP 1 Score: 237.3 bits (604), Expect = 7.1e-59
Identity = 164/536 (30.60%), Postives = 244/536 (45.52%), Query Frame = 1 

Query: 1   MTPEVAIQLMGFTNAKDLWEVTRDLFGIQSRAEEDFLRQTFQTTRKS------------- 60
           +TPE+  Q++G+ ++   W      F   SRA    LR  FQTTRK              
Sbjct: 164 LTPEIMGQIVGYQSSHAXWFALEXXFXASSRARVMQLRLEFQTTRKGSLTMMEYILKLKS 223

Query: 61  --------GSPVPLCALVSQVLLGLDEK----------RLEHQNSQRNTGNAVRNVTINV 120
                   G PV     + Q+L GL             R +  NS         N+    
Sbjct: 224 LADNLAAIGEPVTDRDQILQLLGGLGADYNSIVASLTAREDEDNSVAEDNVISANLATPQ 283

Query: 121 AQRTNSNEHKSHNGQQFYGQRGNSNNGRGRGRGRGNKPTCQVCDKYDHYALACYNQFNRD 180
            Q  N+      N Q  +  R  +N GR +     ++P CQ+C K+ H  + CY++F+ +
Sbjct: 284 YQHFNNKRSSGQNRQSGFNTRRGTNGGRSQSSQ--HRPQCQLCGKFGHTVVRCYHRFDIN 343

Query: 181 FMSPLVQDRGQNLSASANPNPSAFVTTQSPTPFATSETVIDPNWYIDSGATNHVTTKSFG 240
           F     Q    N+       P+A    Q     A+  T+ D  W+ D+GAT+H++     
Sbjct: 344 F-----QGYNPNMDTVQTNKPNA--KNQVQAMMASPSTISDEAWFFDTGATHHLSQSIDP 403

Query: 241 LTNPTEYSGKEKATVGNGNNLNISCVGHSYLTDAKQFLALKNVLCVPDITKNLVSGSKLA 300
           L++   Y G +K  VGNG +L I   G ++   + +   L+ VL VPDI  NL+S S+  
Sbjct: 404 LSDVQPYMGNDKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQVLHVPDIATNLISVSQFC 463

Query: 301 QDNHIFLEFHNYYCLVKDKATGEILLKETLKDGLYHLENVGLMVAAELEHSTIKKQLIHK 360
            DN+ F EFH  +  VKD+ T +ILL+ +L+ GLY      +   A    S+  +     
Sbjct: 464 ADNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGLYRFPARFVPSPAAFVSSSYDRSSNLS 523

Query: 361 NKETSTFILSGGKNLVSINVAVWHKCLGHHSSKILNTLVKKCN------------ACQLE 420
              T+T               +WH  LGH +  IL  ++  CN            ACQ  
Sbjct: 524 LTTTTT---------------LWHSRLGHPADNILKHILTSCNISHQCHKNNVCCACQFA 583

Query: 421 KAHNLPFTISQSRAAESFDIIYSDLWGPTPICSSDGFRYYIIFVDDYSRYTLDLSFEQKS 480
           K+H LPF +  SRA+    ++++DLWGP  I S+ G RY+I+FVDD+SR++       K 
Sbjct: 584 KSHKLPFNVXVSRASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSRFSWIYPLHSKD 643

Query: 481 TAIDAFKHFITYVKNQFNKSIKVFQSDNGGEYKKIHLLCTTLGINWDAHTYFTRPY 494
            A+  F  F + V+NQFN  I+  +SDNGGE+K       T GI     + F+ PY
Sbjct: 644 QALSVFIKFKSLVENQFNSRIQCLRSDNGGEFKAFSSYLATHGIK----SQFSCPY 671

[Close]
BLAST of CSPI07G08330 vs. NCBI nr
Match: gi|1012342015|gb|KYP53212.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57
Identity = 154/446 (34.53%), Postives = 229/446 (51.35%), Query Frame = 1 

Query: 61  LLGLDEKRLEHQNSQRNT---GNAVRNVTINVAQRTNSNEHKSHNGQQFYGQRGNSNNGR 120
           LL   E+RLE   +  +     N  +    +  Q TN     ++NG    G     + GR
Sbjct: 67  LLMAQEERLEKHKASESVPLQANLAQGSFNSRKQFTNQGRGSNNNGTHGRGP----HRGR 126

Query: 121 GRGR-----GRGNKPTCQVCDKYDHYALACYNQFNRDFMSPLVQDRGQNLSASANP-NPS 180
           GRGR     GRGNK  CQVC K  H A  C++++++ +  P       NL+ + N  NP 
Sbjct: 127 GRGRSAQHFGRGNKQPCQVCGKIGHIAFHCWHRYDQQYTEP-------NLNHNTNVYNPG 186

Query: 181 AFVTTQSPTPFATSETVIDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLN 240
                Q+     +   V D  WY DSGATNH+T+    L + T+Y+G++K  +GNG  + 
Sbjct: 187 NQQQMQAMIA-GSQNMVYDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDKIHMGNGQAIG 246

Query: 241 ISCVGHSYLTD--AKQFLALKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKA 300
           I+  G S+     + +   LK +L VP ITKNL+S SK  +DN++++EFH  YCLVK + 
Sbjct: 247 INHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFHTNYCLVKSQD 306

Query: 301 TGEILLKETLKDGLYHLENVGLMVAAELEHSTIKKQLIHKNKETSTFILSGGKNLVSINV 360
           + E LL+  LK+GLY  + V ++     EH+      +  N+ T+ ++    K+      
Sbjct: 307 SKETLLRGNLKNGLYVFDEVQILKPDVYEHTV---DSVPTNR-TTLYVQRTRKSY----- 366

Query: 361 AVWHKCLGHHSSKILNTLVKKCN--------------ACQLEKAHNLPFTISQSRAAESF 420
            VWH  L H S KI+  ++K CN              +C + K+H LPF+ S +      
Sbjct: 367 DVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSPL 426

Query: 421 DIIYSDLWGPTPICSSDGFRYYIIFVDDYSRYTLDLSFEQKSTAIDAFKHFITYVKNQFN 480
           +++YSD+WGP+   S +GFRYY+ F D +S+YT       KS     F HF + V+NQF 
Sbjct: 427 ELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQFG 486

Query: 481 KSIKVFQSDNGGEYKKIHLLCTTLGI 482
             IK+FQSD G E+  +  L    GI
Sbjct: 487 HKIKMFQSDGGKEFTCLTKLFNENGI 491

[Close]
BLAST of CSPI07G08330 vs. NCBI nr
Match: gi|1012364758|gb|KYP75940.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan])

HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57
Identity = 154/446 (34.53%), Postives = 229/446 (51.35%), Query Frame = 1 

Query: 61  LLGLDEKRLEHQNSQRNT---GNAVRNVTINVAQRTNSNEHKSHNGQQFYGQRGNSNNGR 120
           LL   E+RLE   +  +     N  +    +  Q TN     ++NG    G     + GR
Sbjct: 201 LLMAQEERLEKHKASESVPLQANLAQGSFNSRKQFTNQGRGSNNNGTHGRGP----HRGR 260

Query: 121 GRGR-----GRGNKPTCQVCDKYDHYALACYNQFNRDFMSPLVQDRGQNLSASANP-NPS 180
           GRGR     GRGNK  CQVC K  H A  C++++++ +  P       NL+ + N  NP 
Sbjct: 261 GRGRSAQHFGRGNKQPCQVCGKIGHIAFHCWHRYDQQYTEP-------NLNHNTNVYNPG 320

Query: 181 AFVTTQSPTPFATSETVIDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNLN 240
                Q+     +   V D  WY DSGATNH+T+    L + T+Y+G++K  +GNG  + 
Sbjct: 321 NQQQMQAMIA-GSQNMVYDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDKIHMGNGQAIG 380

Query: 241 ISCVGHSYLTD--AKQFLALKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKA 300
           I+  G S+     + +   LK +L VP ITKNL+S SK  +DN++++EFH  YCLVK + 
Sbjct: 381 INHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFHTNYCLVKSQD 440

Query: 301 TGEILLKETLKDGLYHLENVGLMVAAELEHSTIKKQLIHKNKETSTFILSGGKNLVSINV 360
           + E LL+  LK+GLY  + V ++     EH+      +  N+ T+ ++    K+      
Sbjct: 441 SKETLLRGNLKNGLYVFDEVQILKPDVYEHTV---DSVPTNR-TTLYVQRTRKSY----- 500

Query: 361 AVWHKCLGHHSSKILNTLVKKCN--------------ACQLEKAHNLPFTISQSRAAESF 420
            VWH  L H S KI+  ++K CN              +C + K+H LPF+ S +      
Sbjct: 501 DVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSPL 560

Query: 421 DIIYSDLWGPTPICSSDGFRYYIIFVDDYSRYTLDLSFEQKSTAIDAFKHFITYVKNQFN 480
           +++YSD+WGP+   S +GFRYY+ F D +S+YT       KS     F HF + V+NQF 
Sbjct: 561 ELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQFG 620

Query: 481 KSIKVFQSDNGGEYKKIHLLCTTLGI 482
             IK+FQSD G E+  +  L    GI
Sbjct: 621 HKIKMFQSDGGKEFTCLTKLFNENGI 625

[Close]
BLAST of CSPI07G08330 vs. NCBI nr
Match: gi|147790209|emb|CAN61322.1| (hypothetical protein VITISV_012106 [Vitis vinifera])

HSP 1 Score: 230.3 bits (586), Expect = 8.7e-57
Identity = 156/458 (34.06%), Postives = 230/458 (50.22%), Query Frame = 1 

Query: 66  EKRLEHQNSQRNTGNAVRNVTINVAQRTNSNEH-KSHNGQQFYGQRGNSNNGRGRGRGRG 125
           E RLE Q+S       +  ++ N A  +N+    +  NG +  G   N+NN   RGRGRG
Sbjct: 218 EHRLEQQSS-------IEQMSANYASSSNNRGGGRKFNGGRGQGYSPNNNNYTYRGRGRG 277

Query: 126 N--------------KPTCQVCDKYDHYALACYNQFNRDFMSPLVQDRGQNLSASANPNP 185
                          KP CQ+C K+ H A  CY++F+  F          +L+     N 
Sbjct: 278 GRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTI-SHSLNNGNQNNI 337

Query: 186 SAFVTTQSPTPFATSETVIDPNWYIDSGATNHVTTKSFGLTNPTEYSGKEKATVGNGNNL 245
            A V + S  P        D +WY+DSGA++H+T     LT+ + Y+G +K T+GNG +L
Sbjct: 338 PAMVASASNNP-------ADESWYLDSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHL 397

Query: 246 NISCVGHSYLTDAKQFLALKNVLCVPDITKNLVSGSKLAQDNHIFLEFHNYYCLVKDKAT 305
           +IS +G   L        LK V  VP I+ NL+S +K   +N+  +EFH+    VKD  T
Sbjct: 398 SISNIGSKQLHSHTHSFRLKKVFHVPFISANLISVAKFCSENNALIEFHSNAFFVKDLHT 457

Query: 306 GEILLKETLKDGLYHLENVGLMVAAELE-HSTIKKQLIHKNKETSTFILSGGKNLVSINV 365
             +L +  L++GLY        V + L+ +S+I       ++ +ST         V    
Sbjct: 458 KMVLAQGKLENGLYKFP-----VFSNLKPYSSINNASAFHSQFSST---------VENKA 517

Query: 366 AVWHKCLGHHSSKILNTLVKKCNA------------CQLEKAHNLPFTISQSRAAESFDI 425
            +WH  LGH S  I++ ++  CN             CQL K+H LP  +S   A++  ++
Sbjct: 518 ELWHNRLGHASFDIVSKVMNTCNVASGKYKSFVCSDCQLAKSHRLPTQLSNFHASKPLEL 577

Query: 426 IYSDLWGPTPICSSDGFRYYIIFVDDYSRYTLDLSFEQKSTAIDAFKHFITYVKNQFNKS 485
           +Y+D+WGP  I S+ G RY+I+FVDDYSRYT   S + K  A+  FK F   ++NQF+  
Sbjct: 578 VYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKXFKLQMENQFDTK 637

Query: 486 IKVFQSDNGGEYKKIHLLCTTLGINWDAHTYFTRPYQS 496
           IK  QSDNGGE++        +GI   AH  F+ PY S
Sbjct: 638 IKCLQSDNGGEFRSFTSFLQAVGI---AHR-FSCPYNS 642

The following BLAST results are available for this feature:
BLAST of CSPI07G08330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POLX_TOBAC2.4e-2225.92Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
YG22B_YEAST6.7e-0921.25Transposon Ty2-GR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
YG21B_YEAST6.7e-0921.25Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
YO21B_YEAST6.7e-0921.25Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
YD22B_YEAST6.7e-0921.25Transposon Ty2-DR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
BLAST of CSPI07G08330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151S6M8_CAJCA2.1e-7835.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=... [more]
A0A151U9E7_CAJCA1.6e-5734.53Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanu... [more]
A0A151SEF4_CAJCA1.6e-5734.53Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=... [more]
A5BUG6_VITVI7.9e-5729.53Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005638 PE=4 SV=1[more]
A5BFT3_VITVI1.0e-5633.47Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017741 PE=4 SV=1[more]
BLAST of CSPI07G08330 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G08330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1012339207|gb|KYP50444.1|3.1e-7835.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
gi|147816383|emb|CAN68489.1|7.1e-5930.60hypothetical protein VITISV_037543 [Vitis vinifera][more]
gi|1012342015|gb|KYP53212.1|2.3e-5734.53Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
gi|1012364758|gb|KYP75940.1|2.3e-5734.53Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus ca... [more]
gi|147790209|emb|CAN61322.1|8.7e-5734.06hypothetical protein VITISV_012106 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G08330.1CSPI07G08330.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 395..494
score: 1.4
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 379..481
score: 10
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 388..487
score: 1.7
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 390..487
score: 4.1
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 349..544
score: 3.3E-101coord: 1..323
score: 3.3E
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 349..544
score: 3.3E-101coord: 1..323
score: 3.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G08330Cucsa.247860Cucumber (Gy14) v1cgycpiB370
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G08330Cucurbita maxima (Rimu)cmacpiB041
CSPI07G08330Cucurbita maxima (Rimu)cmacpiB504
CSPI07G08330Cucurbita moschata (Rifu)cmocpiB031
CSPI07G08330Cucurbita moschata (Rifu)cmocpiB495
CSPI07G08330Cucumber (Chinese Long) v2cpicuB354
CSPI07G08330Melon (DHL92) v3.5.1cpimeB530
CSPI07G08330Watermelon (Charleston Gray)cpiwcgB548
CSPI07G08330Watermelon (97103) v1cpiwmB579
CSPI07G08330Cucurbita pepo (Zucchini)cpecpiB590
CSPI07G08330Cucurbita pepo (Zucchini)cpecpiB798
CSPI07G08330Bottle gourd (USVL1VR-Ls)cpilsiB526
CSPI07G08330Melon (DHL92) v3.6.1cpimedB533
CSPI07G08330Cucumber (Gy14) v2cgybcpiB332
CSPI07G08330Silver-seed gourdcarcpiB0918
CSPI07G08330Silver-seed gourdcarcpiB0944
CSPI07G08330Cucumber (Chinese Long) v3cpicucB415
CSPI07G08330Watermelon (97103) v2cpiwmbB591
CSPI07G08330Wax gourdcpiwgoB709