CSPI07G08280 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G08280
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTransposon Ty3-G Gag-Pol polyprotein
LocationChr7 : 6026597 .. 6027581 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACAAAGACAAATGGAGGAACGAATGGAAGGAACCGAGAAGGAGCTGCTGAGCATGAAAGAAATGCTACTGGAAATGAAGAAATCTATGGAAAGACTGACAGAGGAACTAAGAGAGAATCATAGCTATAAGAAAAGAGATGAATCCGGAACATCTGATGGATCCAGCATGAAGTTGAAAGGAAAAGTAGAAGAATCGGAAGTCTGTAATGAGGTAAATGGAAGCAATGTGGATCGAAGTAAGTACGCAAAGTTAGAAATGCCTATGTTCTTAGGTGAAAATCCAGAATCCTGGGTATATAGAGCAGAACATTTCTTTGAGATGAACAACCTGCCAGAAAACGAGAAGATCAGAGTGGCGGTGGTCAGTTTTGGGCAAGAGGAAGTGGACTGGTACAGGTGGACGCATAATAGGAAGAAAGTAGAGTCATGGGAAGATTTGAAAGGGAGGATGTTTGATTTCTTCAAGGACTCGGGACAAACAAGTCTAGTGGCACGCTTGATTAGGATTCAACAAGATGGATCCTACAGTGAGTATGTGAAGAAATTTGTCACATATTCAGCTCCTCTCCCTCATATGGAGGAAAGTGTGTTACGCAATGTTTTTCTGACCGGTCTGGAACCCAATCTTCAGGCAGAAGTCGTTAGTCGTTTCCCTCGAACATTGGAAGATTGTATGAGGGAGGCTCAACTAGTCAATGATCGGAATGTAGCAATGAAATTGACTAAGACCGAGGGCAGGACAGTGGAACCAAAGAAAAAAGAAGAGTATGCAGGAAAAATCCAAGATGGAACAGACAAAGGCTACATGAGGAGGACAGATTTCCCCATAAAACAAGTAACTATACCTATTAAGGGTAGTTATCAAAAAAGTGAACCTCCTATCAAACGACTTTCAGACGCAGAATTCAGGTCCAGATTGGATAAGGGCCTATGTTTTAAATGCAATGAGAAGTATACACCAGGGCACAAATGTAGAGTGA

mRNA sequence

ATGGCACAAAGACAAATGGAGGAACGAATGGAAGGAACCGAGAAGGAGCTGCTGAGCATGAAAGAAATGCTACTGGAAATGAAGAAATCTATGGAAAGACTGACAGAGGAACTAAGAGAGAATCATAGCTATAAGAAAAGAGATGAATCCGGAACATCTGATGGATCCAGCATGAAGTTGAAAGGAAAAGTAGAAGAATCGGAAGTCTGTAATGAGGTAAATGGAAGCAATGTGGATCGAAGTAAGTACGCAAAGTTAGAAATGCCTATGTTCTTAGGTGAAAATCCAGAATCCTGGGTATATAGAGCAGAACATTTCTTTGAGATGAACAACCTGCCAGAAAACGAGAAGATCAGAGTGGCGGTGGTCAGTTTTGGGCAAGAGGAAGTGGACTGGTACAGGTGGACGCATAATAGGAAGAAAGTAGAGTCATGGGAAGATTTGAAAGGGAGGATGTTTGATTTCTTCAAGGACTCGGGACAAACAAGTCTAGTGGCACGCTTGATTAGGATTCAACAAGATGGATCCTACAGTGAGTATGTGAAGAAATTTGTCACATATTCAGCTCCTCTCCCTCATATGGAGGAAAGTGTGTTACGCAATGTTTTTCTGACCGGTCTGGAACCCAATCTTCAGGCAGAAGTCGTTAGTCGTTTCCCTCGAACATTGGAAGATTGTATGAGGGAGGCTCAACTAGTCAATGATCGGAATGTAGCAATGAAATTGACTAAGACCGAGGGCAGGACAGTGGAACCAAAGAAAAAAGAAGAGTATGCAGGAAAAATCCAAGATGGAACAGACAAAGGCTACATGAGGAGGACAGATTTCCCCATAAAACAAACGCAGAATTCAGGTCCAGATTGGATAAGGGCCTATGTTTTAAATGCAATGAGAAGTATACACCAGGGCACAAATGTAGAGTGA

Coding sequence (CDS)

ATGGCACAAAGACAAATGGAGGAACGAATGGAAGGAACCGAGAAGGAGCTGCTGAGCATGAAAGAAATGCTACTGGAAATGAAGAAATCTATGGAAAGACTGACAGAGGAACTAAGAGAGAATCATAGCTATAAGAAAAGAGATGAATCCGGAACATCTGATGGATCCAGCATGAAGTTGAAAGGAAAAGTAGAAGAATCGGAAGTCTGTAATGAGGTAAATGGAAGCAATGTGGATCGAAGTAAGTACGCAAAGTTAGAAATGCCTATGTTCTTAGGTGAAAATCCAGAATCCTGGGTATATAGAGCAGAACATTTCTTTGAGATGAACAACCTGCCAGAAAACGAGAAGATCAGAGTGGCGGTGGTCAGTTTTGGGCAAGAGGAAGTGGACTGGTACAGGTGGACGCATAATAGGAAGAAAGTAGAGTCATGGGAAGATTTGAAAGGGAGGATGTTTGATTTCTTCAAGGACTCGGGACAAACAAGTCTAGTGGCACGCTTGATTAGGATTCAACAAGATGGATCCTACAGTGAGTATGTGAAGAAATTTGTCACATATTCAGCTCCTCTCCCTCATATGGAGGAAAGTGTGTTACGCAATGTTTTTCTGACCGGTCTGGAACCCAATCTTCAGGCAGAAGTCGTTAGTCGTTTCCCTCGAACATTGGAAGATTGTATGAGGGAGGCTCAACTAGTCAATGATCGGAATGTAGCAATGAAATTGACTAAGACCGAGGGCAGGACAGTGGAACCAAAGAAAAAAGAAGAGTATGCAGGAAAAATCCAAGATGGAACAGACAAAGGCTACATGAGGAGGACAGATTTCCCCATAAAACAAACGCAGAATTCAGGTCCAGATTGGATAAGGGCCTATGTTTTAAATGCAATGAGAAGTATACACCAGGGCACAAATGTAGAGTGA
Homology
[Close]
BLAST of CSPI07G08280 vs. TrEMBL
Match: E5GCI2_CUCME (Retrotransposon protein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.1e-57
Identity = 122/226 (53.98%), Postives = 157/226 (69.47%), Query Frame = 1 

Query: 1   MAQRQMEERMEGTEKELLSMKEMLLEMKKSMERLTEELRENHSYKKRDESGTSDGSSMKL 60
           MAQ++ E+R+   EKE+  MKEM+L + KSME                    SDG     
Sbjct: 1   MAQKEWEDRLNMNEKEIREMKEMMLNLLKSME--------------------SDGG---- 60

Query: 61  KGKVEESEVCNEVNGSNVDRSKYAKLEMPMFLGENPESWVYRAEHFFEMNNLPENEKIRV 120
                E+E        + DRSKY KLE+P+F GENPE+W+YRAEH+F++N L + EK++V
Sbjct: 61  ----RETETTPGFTVGSSDRSKYKKLEIPVFNGENPETWIYRAEHYFDINELVDEEKVKV 120

Query: 121 AVVSFGQEEVDWYRWTHNRKKVESWEDLKGRMFDFFKDSGQTSLVARLIRIQQDGSYSEY 180
           AVVSFG +EV+W+RW++NRKKV++WEDLK RMF+ FK  G+ SL ARLIRI+QDG YS+Y
Sbjct: 121 AVVSFGPDEVNWFRWSNNRKKVKTWEDLKRRMFEHFKSPGEGSLGARLIRIKQDGCYSDY 180

Query: 181 VKKFVTYSAPLPHMEESVLRNVFLTGLEPNLQAEVVSRFPRTLEDC 227
           +KKF+ YSAPLP M ESVL + F+TGLE NLQAEV SR P TLE+C
Sbjct: 181 LKKFLEYSAPLPEMAESVLIDAFVTGLETNLQAEVKSRHPVTLEEC 198

[Close]
BLAST of CSPI07G08280 vs. TrEMBL
Match: E5GC35_CUCME (Gypsy/ty3 element polyprotein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.6e-29
Identity = 84/249 (33.73%), Postives = 143/249 (57.43%), Query Frame = 1 

Query: 1   MAQRQMEERMEGTEKELLSMKEMLLE---MKKSMERLTEELRENHSYKKRDESGTSDGSS 60
           M Q+ ++E ++ +E E+ ++K+ +     ++K+ME++   L E +   +R   G      
Sbjct: 1   MMQKLIKECLDASEAEIEAIKKEVQRIPVLEKTMEKMHAMLTEMYEDCQRQPGGFELTRV 60

Query: 61  MKLKGKV---------EESEVCNEVN-GSNVDRSKYAKLEMPMFLGENPESWVYRAEHFF 120
              K K+         EE E    +  G+  DR K+ KLEMP+F GE+P+ W+Y+AE++F
Sbjct: 61  STGKRKIRTEDLVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGEDPDGWIYKAEYYF 120

Query: 121 EMNNLPENEKIRVAVVSFGQEEVDWYRWTHNRKKVESWEDLKGRMFDFFKDSGQTSLVAR 180
           +M+ L E EK+++A+VS   + + W+RW  NRK+  SW++LK RM++ F +    +  AR
Sbjct: 121 QMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERMYNRFCNREYGTGCAR 180

Query: 181 LIRIQQDGSYSEYVKKFVTYSAPLPHMEESVLRNVFLTGLEPNLQAEVVSRFPRTLEDCM 237
            + I+ +GS  EY+++F   S PLP M E VL   F  GL+P ++ EV +     LED +
Sbjct: 181 FLAIKHEGSVGEYLQRFEELSTPLPEMAEDVLVGTFTKGLDPVIRTEVFAMRVVGLEDMV 240

[Close]
BLAST of CSPI07G08280 vs. TrEMBL
Match: A0A087HEJ2_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA2G009700 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.7e-23
Identity = 55/155 (35.48%), Postives = 90/155 (58.06%), Query Frame = 1 

Query: 85  KLEMPMFLGENPESWVYRAEHFFEMNNLPENEKIRVAVVSFGQEEVDWYRWTHNRKKVES 144
           ++EMP+F G+N ESWV R E +FE+ N  + EK++   V F  E   WY+W  +R    +
Sbjct: 121 RIEMPLFSGDNAESWVQRMEQYFELGNFSDLEKLQAVRVCFLDEAWSWYQWERDRNPFRT 180

Query: 145 WEDLKGRMFDFFKDSGQTSLVARLIRIQQDGSYSEYVKKFVTYSAPLPHMEESVLRNVFL 204
           W  L+ R+ D F  S  +S   RL+ ++Q+GS  +Y ++F+  +     ++E+ L  VF+
Sbjct: 181 WAQLRSRLLDEFSSSPDSSAGERLLTLKQEGSVKDYCREFIALATNAHEIQETTLELVFM 240

Query: 205 TGLEPNLQAEVVSRFPRTLEDCMREAQLVNDRNVA 240
            GL+P ++A   +  PRTL+  M  AQ V+  + A
Sbjct: 241 VGLKPAIRARTKTFEPRTLKQMMGVAQRVDGWSTA 275

[Close]
BLAST of CSPI07G08280 vs. TrEMBL
Match: A0A087G3S6_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs46225U000100 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.8e-23
Identity = 56/155 (36.13%), Postives = 86/155 (55.48%), Query Frame = 1 

Query: 85  KLEMPMFLGENPESWVYRAEHFFEMNNLPENEKIRVAVVSFGQEEVDWYRWTHNRKKVES 144
           ++EMP+F G+N ESWV R E +FE+ N  E EK++   V F  E   WY+W   R    S
Sbjct: 127 RIEMPLFSGDNAESWVQRMEQYFELGNFSELEKLQAVRVCFLDEAWSWYQWERARNPFRS 186

Query: 145 WEDLKGRMFDFFKDSGQTSLVARLIRIQQDGSYSEYVKKFVTYSAPLPHMEESVLRNVFL 204
           W  L+ R+ D F  S  +    RL+ ++Q GS  +Y ++F+  +   P ++E+ L   F+
Sbjct: 187 WASLRSRLLDEFSSSPDSCAGERLLTLRQTGSVKDYCREFIALATNAPEIQETTLELAFM 246

Query: 205 TGLEPNLQAEVVSRFPRTLEDCMREAQLVNDRNVA 240
            GL P ++A   +  PRTL+  M  AQ V+  + A
Sbjct: 247 VGLTPAIRARTKTFEPRTLKQMMGIAQRVDGWSAA 281

[Close]
BLAST of CSPI07G08280 vs. TrEMBL
Match: A5B2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22
Identity = 89/307 (28.99%), Postives = 149/307 (48.53%), Query Frame = 1 

Query: 1   MAQRQMEERMEGTEKELLSMKE-----------MLLEMKKSMERLTEELRENHSYKKRDE 60
           MAQ++ E R++  EKE+  ++E            L E +K++  L+       + ++ D 
Sbjct: 680 MAQKRNEGRVDCLEKEVGEIREEMQRLPRMEKTSLEETQKAVAALSLGRNTTTAAQREDR 739

Query: 61  SGTSDGSSMKLKGKVEESEVCNEVNGSNVDRSKYAKLEMPMFLGENPESWVYRAEHFFEM 120
           +G   G      G +   E+     G N +     ++EMP+F GENP+ W++RA+ +F  
Sbjct: 740 AGWIPGVWEPSGGGMASDEMRR---GGNGEWRGSRRVEMPVFTGENPDGWIFRADRYFAT 799

Query: 121 NNLPENEKIRVAVVSFGQEEVDWYRWTHNRKKVESWEDLKGRMFDFFKDSGQTSLVARLI 180
             L E EK+  A +S   + + WY+WT +R+   SWE+LK R+   F+ + + SL  + +
Sbjct: 800 YGLTEEEKLVAAAMSLDGDALSWYQWTDSREVFGSWENLKRRLLLRFRLTQEGSLCEQFL 859

Query: 181 RIQQDGSYSEYVKKFVTYSAPLPHMEESVLRNVFLTGLEPNLQAEVVSRFPRTLEDCMRE 240
            ++Q G+ + Y ++F     PL  + E V+ + F+ GL P ++AE     P  L   M  
Sbjct: 860 AVRQQGTVAAYWREFEILETPLKGISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEM 919

Query: 241 AQLVNDRNVAM------------KLTKTEGRTVEPKKKEEYAGKIQDGTDKGYMRRTDFP 285
           AQ V DRN+AM            K+  T  R  E K  E +  +     +K   +R + P
Sbjct: 920 AQRVEDRNLAMRAAREPNGPKSTKMLSTANRG-EWKIGENFQTRAVAVGEKTMSQRREIP 979

[Close]
BLAST of CSPI07G08280 vs. NCBI nr
Match: gi|778697580|ref|XP_011654353.1| (PREDICTED: uncharacterized protein LOC105435354 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 4.5e-110
Identity = 207/280 (73.93%), Postives = 242/280 (86.43%), Query Frame = 1 

Query: 1   MAQRQMEERMEGTEKELLSMKEMLLEMKKSMERLTEELRENHSYKKRDESGTSDGSSMKL 60
           MAQRQ+E+ ++GTEKE++ +KEMLLEMKK+MER+ E LRENHSYK+R+ESGTSDGS MKL
Sbjct: 1   MAQRQIEDIVDGTEKEIMVLKEMLLEMKKAMERMAEVLRENHSYKRREESGTSDGSVMKL 60

Query: 61  KGKVEESEVCNEVNGSNVDRSKYAKLEMPMFLGENPESWVYRAEHFFEMNNLPENEKIRV 120
           KGK EE++V NE N +  DRSKY KLEMPMFLGENPESWVYRAEHFFE+NNLPE EK++V
Sbjct: 61  KGKAEETDVHNEGNLTMGDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPETEKVKV 120

Query: 121 AVVSFGQEEVDWYRWTHNRKKVESWEDLKGRMFDFFKDSGQTSLVARLIRIQQDGSYSEY 180
           AVVSFGQ+EVDWYR +HNRKKVESWEDLK RMFDFFKD+GQ SLVARLIRI+QDGSY++Y
Sbjct: 121 AVVSFGQDEVDWYRRSHNRKKVESWEDLKERMFDFFKDTGQKSLVARLIRIEQDGSYNDY 180

Query: 181 VKKFVTYSAPLPHMEESVLRNVFLTGLEPNLQAEVVSRFPRTLEDCMREAQLVNDRNVAM 240
           VKKFV YSAPLPHM ESVLR+ FLTGLEPNLQAEVVS  P TLE+CMREAQLVNDRN+A+
Sbjct: 181 VKKFVNYSAPLPHMTESVLRDAFLTGLEPNLQAEVVSHNPLTLEECMREAQLVNDRNLAL 240

Query: 241 KLTKTEGRTVEPKKKEEYAGKIQDGTDKGYMRRTDFPIKQ 281
           + +K EG  +  KK E    K  +G +KG  R+T+FP+KQ
Sbjct: 241 QWSKAEGGGLNYKKGEGSTNKGPEGGEKGITRKTEFPLKQ 280

[Close]
BLAST of CSPI07G08280 vs. NCBI nr
Match: gi|659093726|ref|XP_008447685.1| (PREDICTED: uncharacterized protein LOC103490096 [Cucumis melo])

HSP 1 Score: 390.6 bits (1002), Expect = 2.6e-105
Identity = 196/280 (70.00%), Postives = 238/280 (85.00%), Query Frame = 1 

Query: 1   MAQRQMEERMEGTEKELLSMKEMLLEMKKSMERLTEELRENHSYKKRDESGTSDGSSMKL 60
           MAQRQMEER+EG +KE+LS+K+M+LEMKK+M+RL +ELREN SYKK++ES TSDGS MK+
Sbjct: 1   MAQRQMEERLEGMKKEVLSLKKMMLEMKKNMDRLADELRENQSYKKKEESDTSDGSIMKM 60

Query: 61  KGKVEESEVCNEVNGSNVDRSKYAKLEMPMFLGENPESWVYRAEHFFEMNNLPENEKIRV 120
           KGK+EE+++  EVN + VDRSKY KLEMPMF GENPES VYRAEHFFE+NNLPE EK++V
Sbjct: 61  KGKMEETDITTEVNTNLVDRSKYKKLEMPMFFGENPESCVYRAEHFFEINNLPEAEKVKV 120

Query: 121 AVVSFGQEEVDWYRWTHNRKKVESWEDLKGRMFDFFKDSGQTSLVARLIRIQQDGSYSEY 180
           AVVSFGQ++VDWYRW+HNRKKVESWEDLK RMF+FF+D+GQ SL ARLIRIQQ+GSY++Y
Sbjct: 121 AVVSFGQDKVDWYRWSHNRKKVESWEDLKTRMFEFFRDTGQKSLGARLIRIQQEGSYNDY 180

Query: 181 VKKFVTYSAPLPHMEESVLRNVFLTGLEPNLQAEVVSRFPRTLEDCMREAQLVNDRNVAM 240
           VKKFV YSAPLPHM ESVLR+ FLTGLEP LQ EV+S  P+TLE+CM  AQLVNDRN+A+
Sbjct: 181 VKKFVNYSAPLPHMVESVLRDTFLTGLEPTLQVEVMSCHPQTLEECMMAAQLVNDRNLAL 240

Query: 241 KLTKTEGRTVEPKKKEEYAGKIQDGTDKGYMRRTDFPIKQ 281
           KL + E   +EPK+ E    K+    DKG MR+ +F +KQ
Sbjct: 241 KLAQAEMGIMEPKRSEATNTKVPWNNDKGSMRKNEFQMKQ 280

[Close]
BLAST of CSPI07G08280 vs. NCBI nr
Match: gi|659093928|ref|XP_008447791.1| (PREDICTED: uncharacterized protein LOC103490181 [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 3.4e-105
Identity = 197/275 (71.64%), Postives = 234/275 (85.09%), Query Frame = 1 

Query: 6   MEERMEGTEKELLSMKEMLLEMKKSMERLTEELRENHSYKKRDESGTSDGSSMKLKGKVE 65
           MEER+EGTEKE+LS+KEM+LEMKKSM+RL +ELR+  SYKK++ESGTSDGS MK+KGK+E
Sbjct: 1   MEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRD-QSYKKKEESGTSDGSIMKMKGKME 60

Query: 66  ESEVCNEVNGSNVDRSKYAKLEMPMFLGENPESWVYRAEHFFEMNNLPENEKIRVAVVSF 125
           E+++  EVN    DRSKY KLEMPMFLGENPESWVYRAEHFFE+NNL E EK++VAVVSF
Sbjct: 61  ETDLTGEVNTHLADRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLLEAEKVKVAVVSF 120

Query: 126 GQEEVDWYRWTHNRKKVESWEDLKGRMFDFFKDSGQTSLVARLIRIQQDGSYSEYVKKFV 185
           GQ+EVDWYRW+HNRKKVESWEDLK RMF+FF+D+GQ SL ARLIRIQQ+GSY++YVKKFV
Sbjct: 121 GQDEVDWYRWSHNRKKVESWEDLKTRMFEFFRDTGQKSLGARLIRIQQEGSYNDYVKKFV 180

Query: 186 TYSAPLPHMEESVLRNVFLTGLEPNLQAEVVSRFPRTLEDCMREAQLVNDRNVAMKLTKT 245
            YSAPLPHM ESVLR+ FLTGLEP LQAEV+SR P TLE+CM  AQLVNDRN+A+KL   
Sbjct: 181 NYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPHTLEECMMAAQLVNDRNLALKLAHA 240

Query: 246 EGRTVEPKKKEEYAGKIQDGTDKGYMRRTDFPIKQ 281
           E   +EPK+ E  + K+    DKG MR+ +F +KQ
Sbjct: 241 EMGIIEPKRNEATSTKVPWNNDKGNMRKNEFQMKQ 274

[Close]
BLAST of CSPI07G08280 vs. NCBI nr
Match: gi|659112485|ref|XP_008456244.1| (PREDICTED: uncharacterized protein LOC103496243 [Cucumis melo])

HSP 1 Score: 371.3 bits (952), Expect = 1.6e-99
Identity = 193/280 (68.93%), Postives = 228/280 (81.43%), Query Frame = 1 

Query: 1   MAQRQMEERMEGTEKELLSMKEMLLEMKKSMERLTEELRENHSYKKRDESGTSDGSSMKL 60
           MAQRQ+EER+EGTEKE+L +KEM+ EMKK+MERL EE+RE+  YKK++ESGT DG  MKL
Sbjct: 1   MAQRQVEERLEGTEKEVLGLKEMMREMKKTMERLAEEMRESQYYKKKEESGTFDGFVMKL 60

Query: 61  KGKVEESEVCNEVNGSNVDRSKYAKLEMPMFLGENPESWVYRAEHFFEMNNLPENEKIRV 120
           KGK+EE +V  EVN + VDRSKY KLEMPMFLGENPESWVYR EHFFE+NNL E EK++V
Sbjct: 61  KGKMEELDVTAEVNTNTVDRSKYKKLEMPMFLGENPESWVYRVEHFFEINNLSEAEKVKV 120

Query: 121 AVVSFGQEEVDWYRWTHNRKKVESWEDLKGRMFDFFKDSGQTSLVARLIRIQQDGSYSEY 180
            VVSFGQ+EVDWYRW+HN KKVESWEDLK RMF+FF+D+GQ SL ARLI IQQDGSY+EY
Sbjct: 121 VVVSFGQDEVDWYRWSHNPKKVESWEDLKTRMFEFFRDTGQKSLGARLIWIQQDGSYNEY 180

Query: 181 VKKFVTYSAPLPHMEESVLRNVFLTGLEPNLQAEVVSRFPRTLEDCMREAQLVNDRNVAM 240
           VKKFV YSAPLP+M ESVLR+ FLTGLEP LQAEVVSR P+TLE+CM EA LVND N+A+
Sbjct: 181 VKKFVNYSAPLPYMAESVLRDAFLTGLEPTLQAEVVSRHPQTLEECMMEALLVNDCNLAL 240

Query: 241 KLTKTEGRTVEPKKKEEYAGKIQDGTDKGYMRRTDFPIKQ 281
           KL++ E    + K  E    K     +KG  R+ +F +KQ
Sbjct: 241 KLSRAELGIHKYKGGEPANTKAPVSNEKGNPRKNEFQMKQ 280

[Close]
BLAST of CSPI07G08280 vs. NCBI nr
Match: gi|659094491|ref|XP_008448087.1| (PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 3.6e-83
Identity = 157/223 (70.40%), Postives = 185/223 (82.96%), Query Frame = 1 

Query: 58  MKLKGKVEESEVCNEVNGSNVDRSKYAKLEMPMFLGENPESWVYRAEHFFEMNNLPENEK 117
           MKLKGK++E+E   E+NG+  DRSKY KLEMPMFL ENPESWVYRAEHFFE+NNLPE+EK
Sbjct: 1   MKLKGKMDETEPITEINGTVTDRSKYKKLEMPMFLEENPESWVYRAEHFFEINNLPESEK 60

Query: 118 IRVAVVSFGQEEVDWYRWTHNRKKVESWEDLKGRMFDFFKDSGQTSLVARLIRIQQDGSY 177
           ++VAVV FGQ+EVDWYRW+HN+KKVESWEDLK RMF+FF+DSGQ SL ARLIRIQQDGSY
Sbjct: 61  VKVAVVIFGQDEVDWYRWSHNKKKVESWEDLKSRMFEFFRDSGQKSLGARLIRIQQDGSY 120

Query: 178 SEYVKKFVTYSAPLPHMEESVLRNVFLTGLEPNLQAEVVSRFPRTLEDCMREAQLVNDRN 237
           +EYVKKFV YSAPLP+M  SVL + F+TGLEP+LQAEV+SR P+TLEDCMREAQLVNDRN
Sbjct: 121 NEYVKKFVIYSAPLPYMAGSVLVDAFVTGLEPSLQAEVISRHPQTLEDCMREAQLVNDRN 180

Query: 238 VAMKLTKTEGRTVEPKKKEEYAGKIQDGTDKGYMRRTDFPIKQ 281
           +A+KL+K E    E ++      K     DK   R+TDF +KQ
Sbjct: 181 LALKLSKMELGMTEWEEGGSSKVKKLGDVDKPPPRKTDFQMKQ 223

The following BLAST results are available for this feature:
BLAST of CSPI07G08280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G08280 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCI2_CUCME3.1e-5753.98Retrotransposon protein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GC35_CUCME3.6e-2933.73Gypsy/ty3 element polyprotein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A087HEJ2_ARAAL1.7e-2335.48Uncharacterized protein OS=Arabis alpina GN=AALP_AA2G009700 PE=4 SV=1[more]
A0A087G3S6_ARAAL3.8e-2336.13Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs46225U000100 PE=4... [more]
A5B2I6_VITVI1.5e-2228.99Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1[more]
BLAST of CSPI07G08280 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G08280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778697580|ref|XP_011654353.1|4.5e-11073.93PREDICTED: uncharacterized protein LOC105435354 [Cucumis sativus][more]
gi|659093726|ref|XP_008447685.1|2.6e-10570.00PREDICTED: uncharacterized protein LOC103490096 [Cucumis melo][more]
gi|659093928|ref|XP_008447791.1|3.4e-10571.64PREDICTED: uncharacterized protein LOC103490181 [Cucumis melo][more]
gi|659112485|ref|XP_008456244.1|1.6e-9968.93PREDICTED: uncharacterized protein LOC103496243 [Cucumis melo][more]
gi|659094491|ref|XP_008448087.1|3.6e-8370.40PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G08280.1CSPI07G08280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 120..208
score: 2.
NoneNo IPR availableunknownCoilCoilcoord: 3..41
scor
NoneNo IPR availablePANTHERPTHR34482FAMILY NOT NAMEDcoord: 4..232
score: 1.0
NoneNo IPR availablePANTHERPTHR34482:SF1SUBFAMILY NOT NAMEDcoord: 4..232
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI07G08280CSPI02G12050Wild cucumber (PI 183967)cpicpiB094
The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G08280Watermelon (97103) v2cpiwmbB591
CSPI07G08280Wax gourdcpiwgoB709
CSPI07G08280Cucurbita maxima (Rimu)cmacpiB041
CSPI07G08280Cucurbita maxima (Rimu)cmacpiB504
CSPI07G08280Cucurbita moschata (Rifu)cmocpiB031
CSPI07G08280Cucurbita moschata (Rifu)cmocpiB495
CSPI07G08280Cucumber (Chinese Long) v2cpicuB354
CSPI07G08280Melon (DHL92) v3.5.1cpimeB530
CSPI07G08280Watermelon (Charleston Gray)cpiwcgB548
CSPI07G08280Watermelon (97103) v1cpiwmB579
CSPI07G08280Cucurbita pepo (Zucchini)cpecpiB590
CSPI07G08280Cucurbita pepo (Zucchini)cpecpiB798
CSPI07G08280Bottle gourd (USVL1VR-Ls)cpilsiB526
CSPI07G08280Melon (DHL92) v3.6.1cpimedB533
CSPI07G08280Cucumber (Gy14) v2cgybcpiB332
CSPI07G08280Silver-seed gourdcarcpiB0918
CSPI07G08280Silver-seed gourdcarcpiB0944
CSPI07G08280Cucumber (Chinese Long) v3cpicucB415