CSPI07G08160 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G08160
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionZinc finger protein, putative
LocationChr7 : 5841342 .. 5846522 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATGTGATTGTTCAGGAAAATGTTGTTCCTCTTCCTACTTCGCTCCCAAAACTCCGAATTCATGAATTCATTTTCAGAAGAAATGTAACTCTTAGTTTCTCTTTTCCAATCGGTAGTCTCTCATCGGCGGATTCAATCGTAAATTCTATACAATCCGTTGCTTTCAAGTGTTCAAGAAACTAGTTGTCGACGTCCTCACCACCATGCTCAACAATCAGTGTTCCAATTAAGAGGTAATTACTCTTCTTTTCATCCTCTCGCGTTTCCTATTTCATTCCTACTTCCTATGTTGTATAGCAGCCCCTCTTAAATCCTCCATTTTTACGCTTTCGTTTTTCTTGATCGCTGATTTTTTTTTATGAAATCATGATCTATTTTGCTTGTAAATTTCAACTGAACAAAGCTTGTCACTTGTTCTTTATCAGCTTCCTCATCTTTCTTCAAGCCTTCTATGACATCTTTTATCGCAGCTCTGCCTCTGTCCAAATGTCGTTCCATATTGGTGAGAATGCAATCTTCATTTTTCTTTCTTCATTTCCTTGTTTCAATCCTCCTTCAATAGGTTCGTTTAATCTTCTTTATTGCTCGTGTCTTCCTACTGTTTGAGTAAATTACACAATGAAAAGAATAGGAAGATATTTGGACAAGAAGAACTACGGAGGAAAAAAGCTCAGTTGTTTTAGTCTCATGATTGAAAAGCTATGCTACTTTTAACTTGAGAATGCAATGAGTTGAAGATACTTTTTTCTATAGGGAGCTTGAACAACTACTACGTTGAAAATATTATCAAATACATATGTTTTTTTGTTTCTCAAAATAAACCGCATGTATACAAATTAGTGCAGTATCGCTTCCTTCTCTACCTGAACTTGTTGTCGTGAACTCTCAATACTTTATAATATTGATTCTTGTTTCTTTGTATGCTTTTCTTGTTCAAGGCAAATTAGCTTTGTTATTTTGTAAATTTTTTAGGCCAATAGATAGTGTAGAACAATACCTTTGGATGGTGTGTATACTGCTTGTAACTTAAATCTATTGATCAAAGGATGATTTATCAAATTTCTGATTTACTGGAGTGGCTCCATTATTTGAACTGTTAACAATCTTTGCTCCAATAGTTTGGTGAAGTGGAAAATTATTCAACTTTGGTCATAGCCTCTGCATGTGTTCTTCCTTTCTCTCTTTTTCTCATAAGATTTCTCATTCCTTTTTTATTTAAGCCAAAAATGAGATTTTCTGTGATTATATAGTGAACCTATTTGGTTCTAAATAGGATGGACACATTGTTTTGCTATTAAATATATGGAGATTATGTTATCTTTTTGTAACCACAGCATTTCAACCATCTATTTTCCACTCGATTGATTTAGTTTCTATTTTTTAACTTTTTTAACATGTAAACTTATTTAACAATTGTTCTATAAATTTAGTTGAATGTAGGCTGTACAATGTCATTTTGAATTTGTACCATGATGCTTACATTTGCACATTCAATCACTGCAGGCTTTTGGCTTCACTCATTAGTCTTCACGAGGTTTAGTGTCTCTGGACTAAGGTTTGTTTGGTCCTCTGACAGTTCATAAAACTAATTTTTAGTTTCTTAGGATTGTTGCTAGTTACTTTCCTTATTGGCTTAAGCTTTCTCTTAATATTAAATTGTAGTTTTTTTATTGTTAGAATCTACGAGTTTGACCTTGTTTTTGTTTTCTAGCTGTAACTTTTCTAGGTTTTAATTGTAGCATATCTAGTAATTCATATCAGTACTCTTTACAGGTAGAGGAGAAGCTGAAAGACTAGAAAAGGATAAAGCATTTGCATTCTACATTGAAGCTCAAGGTTAATAAAATTATATGTGGATTATTGTCTGGGAAATTAGATGCTCTCTTTTGTTTGTGTTTTTTTCTGGATTGATGTTGTATATTTGATATGATTTTGGGAACATTTTGATTAGGTTCTGCCTACTGTACTTAGACTTGGGCTAATGACTATGAGTATATAATAAATTTAGGTATATAATCTCAGTCTTGAACTTTATCAGTACGGTTTGGATCAACATTTGAGATTTTATGTAGTCTCGGAGTGGCTCAAGAGTTGTGTATTTTGTATTGCAAAGTCTTTGTGGCAAGTAATTAGTATTTATTCATAAGGTTGGATTTAATCTTTTTGGTTTAGACACTTTTCATCTAGCCGATATAACTTTTAGTGTAAGGAAGAGATGGGAACGTGAAAGAGTTAAGCAAGCATGGGTTCAATCTGTGATGGCCACCTACCTAGAAATTAATATCCTATGAGCTTCCTTGACACCCAAATGTTGTAAGGTTAGACATGTTGTCTCGTGAGATTAGTCAAGGTGTGCGTAAGTTGGCCTGGACACTCGTGTATATAAAAAAAAAATATATATCTTTTTGGTTTAGACACTTTTCATCTAGTCGATATAGTTTAGTGTGAATGAGAGATGGGAACTTGAAGGAGTTTAGTTTCTGCTTTCTGTTTATGAATGATGGTTTATAAGCAATACTAATACACTTCACATTCTGGTTGTTGTTGTAGCTCCTTGAACCCACTTTGCATTCTGGTTGCATGTCTCTACTCTCTTCTCCACTTTAGCATCTCAATCTTTTGTTTGAATTTATCATTCTTTATCTCCTTAATTCACCAATTTCTATGGACAGTACTGGGTCAGGATTTGCTACAATCAATAAATCTTTATTTTGTACTAGGGAGATCAACTTAGAAACCATAAAGCCGATGAAAACATCTAAATTCTGATTGATCTTCTTCTCTGTTCATCAATTTTTATTATTAAGTTTATCATTTTAACTTGGAGATTTCAGTTTTTTTCCTGCGTCATGGAAGATCGTCAAGGAAAGAGGAGCTCCAAAACGTCCATTATCAAAGGCCTAAATGCTTCAATTCGGCCAATGAACATTCAAATGGACAATCACTTGGTAATCGGGGGAACCAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACAATTGTTGATCGTTACAATATTATGAATCACTATGCTAGCAGCACTTCTGGAAGCAATAGCTTTGGTTCTCGGGGAGCAGGGTTGTCATTATCACCACTTTCGGCAATTGAGAATTTGGAAACACCACCTATAAGGTCTCCACAAATTTATGGAACTCCCATGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAGTTCAATTCATGGGGAAGCAAAGACAGTGAGGTCTCCTTTAGATTCTGGAACTGGTGGAGGGGGGAAAAATCAGTACAGATCGGACATTTGCCGCTACTGGGAGGATTCTGGTACCTGCCGCTTTGGCAACAAATGCCAGGTTAGTTATTTTGTCCCCACCGTAATGATTTGATCTGAATTATTGGTTCTGCAAATTTATTGGCCTTTTGTTTATTACTTAAAGGACATCTTACCTCTGCCTTGAGATTTGATTGCTAATATAAGATAAATGGATAAAAAAGATATTTACTATTTTAAGGAATGGTATGATTAAAGATTAGTGGTTCGTGTTCAAGTTTGATTGGTGAAATAATTTATTTATTATTTAACGTTGGTTAATTTTCTATTTATTCTTGTTCATGTGGGTAGACTGAATTAATCTTTAAAAGAATAGCTTGATTGAAATAAATTGATGCACTGAGAGAGCGGTACCAGTACAGGATGAGTTAACGTCTCTTAGCCTGGGTTTTATGAAAAAGTTCCGTGGCTGATACAAGGATGGAATACATATCCCACTCCCAATTTTGTTTAAAATTTGGTCTCAGATAATGAACTCAGTTCTAGTGTGTTAATATGTAGAGCGAAACAGTACGTTGGCTGCAAAAACTGATGCACTTATGTGTTATCACAACAAGTTATTAGATTAGCAGATAAATGAAGCTATACTTTTTCAAAAGTTGGATTAATCATATACTTTGGGATGCCCGACATTCCCTTTCAGTGGTTGGATTTCAGTATCTATAGATCACCGACATCATGTGCTCTTGATTTCTAATAATGGATATATTATTCAATTTCTTGGGTATATAATTCAAATTTTGGGGGATAGGGACTTGGGATTGGATCCTCCTCCTATTTAATACTTTCAAGTAATTAGATTTGGCTGATTTCTTTTATCCAAGAATAGGACCAAAAACTCTCTCTCTCTCTAAAATGTAGTTAATTAAATATTTTGTTTAGTTACTTATCATTCACCGAAAAGTTTGGGGCCCTATTTAATTTTTTATGTAATTGTCTTGTATTTGTTATGGTGTATATACGGGAAAAAGTTCATATCGAGAACCTCATAGCTATTTTAGCACCATGTAAAACTGTAATTAAACCCAAAAGCTTAGAATTATAGGTTAAATTATGATTCACACATCACAGCATGCTTAAACTTTTCTAATAATATTTTCAACCACACATGTTGAAATAAATTAACGGGAAATATCTTTGATTTGCTAATATTATACGGTAGTTGATATGGTTTTTGTGAACTGTATTTTCTGTTTGCAGTTTGCACACGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGACTAAGGTACCATTGACATCTAGTAAATTAAATACACTACAGGTTTTGTTCGGTTAAAAGACACTTTTAGATTTGCATATTCTTCGCCACTACAGTTCAGCGAAACGTATGGTTCCAAGTTCCGCAACAATCATTCACTAACAGGAATAGCTGCGACAACCACAACGCAATCAAACTCAAACTTAGTAGATACAATCACCAAAACTGAACTAAGCAAAAGAGGTCTTACTCCAACATCCTCGACATTAAAAGGGCACACGAACAATAACCCTACACTTATTTCGACCATTTCCATCATCAATTGGTCGCCTGAAGATGATGGCATCAAAATTGCTGTCCCCGGAACAGAGGCGACAAAAAGAGAAGATGTAAACCAACACATCCATGAGGTTCTTTATGGTTCCACCACTGAGAGGACCAAAAAGAGACTCCCAGTTTTCGTTCAAATTTGCTCCGAAGAACTACAAGAAGAATAAGCAACACCAAGCTCTTTTTCATCATCAAATTCCAC

mRNA sequence

ATGGAAGATCGTCAAGGAAAGAGGAGCTCCAAAACGTCCATTATCAAAGGCCTAAATGCTTCAATTCGGCCAATGAACATTCAAATGGACAATCACTTGGTAATCGGGGGAACCAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACAATTGTTGATCGTTACAATATTATGAATCACTATGCTAGCAGCACTTCTGGAAGCAATAGCTTTGGTTCTCGGGGAGCAGGGTTGTCATTATCACCACTTTCGGCAATTGAGAATTTGGAAACACCACCTATAAGGTCTCCACAAATTTATGGAACTCCCATGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAGTTCAATTCATGGGGAAGCAAAGACAGTGAGGTCTCCTTTAGATTCTGGAACTGGTGGAGGGGGGAAAAATCAGTACAGATCGGACATTTGCCGCTACTGGGAGGATTCTGGTACCTGCCGCTTTGGCAACAAATGCCAGTTTGCACACGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGACTAAGTTCAGCGAAACGTATGGTTCCAAGTTCCGCAACAATCATTCACTAACAGGAATAGCTGCGACAACCACAACGCAATCAAACTCAAACTTAGTAGATACAATCACCAAAACTGAACTAAGCAAAAGAGGTCTTACTCCAACATCCTCGACATTAAAAGGGCACACGAACAATAACCCTACACTTATTTCGACCATTTCCATCATCAATTGGTCGCCTGAAGATGATGGCATCAAAATTGCTGTCCCCGGAACAGAGGCGACAAAAAGAGAAGATGTAAACCAACACATCCATGAGGTTCTTTATGGTTCCACCACTGAGAGGACCAAAAAGAGACTCCCAGTTTTCGTTCAAATTTGCTCCGAAGAACTACAAGAAGAATAA

Coding sequence (CDS)

ATGGAAGATCGTCAAGGAAAGAGGAGCTCCAAAACGTCCATTATCAAAGGCCTAAATGCTTCAATTCGGCCAATGAACATTCAAATGGACAATCACTTGGTAATCGGGGGAACCAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACAATTGTTGATCGTTACAATATTATGAATCACTATGCTAGCAGCACTTCTGGAAGCAATAGCTTTGGTTCTCGGGGAGCAGGGTTGTCATTATCACCACTTTCGGCAATTGAGAATTTGGAAACACCACCTATAAGGTCTCCACAAATTTATGGAACTCCCATGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAGTTCAATTCATGGGGAAGCAAAGACAGTGAGGTCTCCTTTAGATTCTGGAACTGGTGGAGGGGGGAAAAATCAGTACAGATCGGACATTTGCCGCTACTGGGAGGATTCTGGTACCTGCCGCTTTGGCAACAAATGCCAGTTTGCACACGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGACTAAGTTCAGCGAAACGTATGGTTCCAAGTTCCGCAACAATCATTCACTAACAGGAATAGCTGCGACAACCACAACGCAATCAAACTCAAACTTAGTAGATACAATCACCAAAACTGAACTAAGCAAAAGAGGTCTTACTCCAACATCCTCGACATTAAAAGGGCACACGAACAATAACCCTACACTTATTTCGACCATTTCCATCATCAATTGGTCGCCTGAAGATGATGGCATCAAAATTGCTGTCCCCGGAACAGAGGCGACAAAAAGAGAAGATGTAAACCAACACATCCATGAGGTTCTTTATGGTTCCACCACTGAGAGGACCAAAAAGAGACTCCCAGTTTTCGTTCAAATTTGCTCCGAAGAACTACAAGAAGAATAA
Homology
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BLAST of CSPI07G08160 vs. Swiss-Prot
Match: TISD_HUMAN (Zinc finger protein 36, C3H1 type-like 2 OS=Homo sapiens GN=ZFP36L2 PE=1 SV=3)

HSP 1 Score: 56.6 bits (135), Expect = 5.6e-07
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 1 

Query: 138 GGGGKN----QYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY 192
           GGGG      +Y++++CR +E+SGTC++G KCQFAHG  +LR      + KT+   T+
Sbjct: 143 GGGGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTF 200

[Close]
BLAST of CSPI07G08160 vs. Swiss-Prot
Match: TISB_HUMAN (Zinc finger protein 36, C3H1 type-like 1 OS=Homo sapiens GN=ZFP36L1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06
Identity = 24/62 (38.71%), Postives = 39/62 (62.90%), Query Frame = 1 

Query: 132 PLDSGTGGGGKN--QYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE 191
           P     GGG  N  +Y++++CR +E++G C++G+KCQFAHG  +LR      + KT+   
Sbjct: 100 PTQKQPGGGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCR 159

[Close]
BLAST of CSPI07G08160 vs. Swiss-Prot
Match: TISD_MOUSE (Zinc finger protein 36, C3H1 type-like 2 OS=Mus musculus GN=Zfp36l2 PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06
Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 1 

Query: 138 GGGGKN----QYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY 192
           GG G      +Y++++CR +E+SGTC++G KCQFAHG  +LR      + KT+   T+
Sbjct: 145 GGSGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTF 202

[Close]
BLAST of CSPI07G08160 vs. Swiss-Prot
Match: TISB_MOUSE (Zinc finger protein 36, C3H1 type-like 1 OS=Mus musculus GN=Zfp36l1 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.7e-06
Identity = 21/56 (37.50%), Postives = 38/56 (67.86%), Query Frame = 1 

Query: 136 GTGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY 192
           G+G    ++Y++++CR +E++G C++G+KCQFAHG  +LR      + KT+   T+
Sbjct: 106 GSGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTF 161

[Close]
BLAST of CSPI07G08160 vs. Swiss-Prot
Match: TISB_RAT (Zinc finger protein 36, C3H1 type-like 1 OS=Rattus norvegicus GN=Zfp36l1 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.7e-06
Identity = 21/56 (37.50%), Postives = 38/56 (67.86%), Query Frame = 1 

Query: 136 GTGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY 192
           G+G    ++Y++++CR +E++G C++G+KCQFAHG  +LR      + KT+   T+
Sbjct: 106 GSGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTF 161

[Close]
BLAST of CSPI07G08160 vs. TrEMBL
Match: A0A0A0K529_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G103290 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 5.6e-139
Identity = 252/254 (99.21%), Postives = 254/254 (100.00%), Query Frame = 1 

Query: 59  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGIL 118
           MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGIL
Sbjct: 1   MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGIL 60

Query: 119 ISSIHGEAKTVRSPLDSGTGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGR 178
           ISSIHGEAKTVRSPLDSG+GGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGR
Sbjct: 61  ISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGR 120

Query: 179 LPVRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKRGLTPTSSTLK 238
           LPVRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKRGLTPTSSTLK
Sbjct: 121 LPVRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKRGLTPTSSTLK 180

Query: 239 GHTNNNPTLISTISIINWSPEDDGIKIAVPGTEATKREDVNQHIHEVLYGSTTERTKKRL 298
           GHTNNNPTLISTISIINWSPEDDGIKIAVPGTE+TKREDVNQHIHEVLYGSTTERTKKRL
Sbjct: 181 GHTNNNPTLISTISIINWSPEDDGIKIAVPGTESTKREDVNQHIHEVLYGSTTERTKKRL 240

Query: 299 PVFVQICSEELQEE 313
           PVFVQICSEELQEE
Sbjct: 241 PVFVQICSEELQEE 254

[Close]
BLAST of CSPI07G08160 vs. TrEMBL
Match: A0A068TMK5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014834001 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-33
Identity = 115/344 (33.43%), Postives = 167/344 (48.55%), Query Frame = 1 

Query: 9   SSKTSIIKGLNASIRPMNIQMDNHLVIGGTRHYHQETNCKSPTIVDRYNIMNHYASSTSG 68
           S++T  +  ++ ++ P+N+   N +  G  +H+H   + KSP       + + YASS SG
Sbjct: 13  STRTPKLNSISGNVSPLNLNTPNFIGRGSYQHHHLRRS-KSP-------VFDPYASSDSG 72

Query: 69  S-------------NSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMD 128
           S              S  S   G  LSPL+AIEN +TP  RS  ++ TP+ ++E+V+VMD
Sbjct: 73  SASPNLESPLIRYLRSSSSSSGGKLLSPLAAIENFDTPASRSSPVFKTPLNIEEDVLVMD 132

Query: 129 GILISSIH------GEAKTVRSPL--------------DSGTGGGGKNQ-YRSDICRYWE 188
           GIL+ S +      G    +RSPL               S + GG +N  Y++D CR  E
Sbjct: 133 GILVDSSNIKTPKGGGVARMRSPLAPLDSDGRQPSSLSSSLSSGGSENSFYKTDKCRSSE 192

Query: 189 DSGTCRFGNKCQFAHGKEDLRPGRLP--------VRTKTKFSETYGSKFRNNHSLTGIAA 248
           DS   RFG KCQFAHGKE+LR  R+          +T +  S  YG+K R  H     A 
Sbjct: 193 DSNAGRFGTKCQFAHGKEELRSSRISKNKLEAQFCKTYSSGSCAYGTKCRFVHDQIKAAV 252

Query: 249 TTTTQSNSNLVDTITKTELSKRGLTPTSSTLKGHTNNNPTLISTISIINWSPEDDGIKIA 308
            +   S ++ V         +R ++P +   K          +  S  +WSP DDGI + 
Sbjct: 253 PSMEPSPTSKV-----LPTPRRAISPITLQNKADFGEK-NAFTAFSTDDWSPLDDGIGVT 312

[Close]
BLAST of CSPI07G08160 vs. TrEMBL
Match: A0A0V0IC54_SOLCH (Putative zinc finger protein 36, C3H1 type-like 1-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.1e-33
Identity = 105/262 (40.08%), Postives = 149/262 (56.87%), Query Frame = 1 

Query: 64  SSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGILISSIH 123
           S++SGS S GS G G+S SPL+++EN+E P      ++ TP+KV+E+V+VMDGIL+   H
Sbjct: 79  STSSGSRS-GS-GGGVSRSPLASLENIEIP-----LMFRTPVKVEEDVVVMDGILVEPKH 138

Query: 124 G-EAKTVRSPLDSG------TGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRP 183
           G  AK   S  DSG      T     + ++S+ CR+WEDSGTCRFG+KC+F HGKEDLRP
Sbjct: 139 GPRAKLSPSTSDSGGRLSSSTPANDNSFHKSETCRWWEDSGTCRFGSKCRFVHGKEDLRP 198

Query: 184 ---------GRLPVRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSK 243
                      L  R+ +    +YG + R+ H     AA+   ++  +   T T  ++  
Sbjct: 199 TAFANRNQSEALLCRSYSSGPSSYGPRGRSVHQQVHSAASPAKEAPMS-TPTTTTLKVFT 258

Query: 244 RGLTPTSSTLKGHTNNNPTLISTISIINWSPEDDGIKIAVP--GTEATKREDVNQHIHEV 303
           +   P+SS     T + PT  STIS  +W P DD I++ +P  G     REDVN HI  V
Sbjct: 259 KDKEPSSS--DSSTTSTPT--STISSTDWCPLDDNIEVTLPSTGENCVSREDVNAHIQTV 318

Query: 304 LYGSTTERTKKRLPVFVQICSE 308
           LYG++    +KRLP  + +  E
Sbjct: 319 LYGTS---GRKRLPACIDLVEE 325

[Close]
BLAST of CSPI07G08160 vs. TrEMBL
Match: M1C8I4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024171 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32
Identity = 105/260 (40.38%), Postives = 147/260 (56.54%), Query Frame = 1 

Query: 64  SSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGILISSIH 123
           S++SGS S GS G G+S SPL+++EN+E P      ++ TP+KV+E+V+VMDGIL+   H
Sbjct: 89  STSSGSRS-GS-GGGVSRSPLASLENIEIP-----LMFRTPVKVEEDVVVMDGILVEPKH 148

Query: 124 G-EAKTVRSPLDSG------TGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRP 183
           G  AK + S  DSG      T     + ++S+ CR+WEDSGTCRFG+KC+F HGKEDL P
Sbjct: 149 GPRAKLLPSTSDSGGRLSSSTPANDNSFHKSETCRWWEDSGTCRFGSKCRFVHGKEDLCP 208

Query: 184 ---------GRLPVRTKTKFSETYGSKFRNNHSLTGIAAT-TTTQSNSNLVDTITKTELS 243
                      L  R+ +    +YG + R+ H     AA+     S S    T T  ++ 
Sbjct: 209 TAFANRNQSEALLCRSYSSGPSSYGPRGRSVHQQVHSAASPAKAASMSTRTTTTTTLKVF 268

Query: 244 KRGLTPTSSTLKGHTNNNPTLISTISIINWSPEDDGIKIAVP--GTEATKREDVNQHIHE 303
            +   P+SS     T + PT  STIS  +W P DD I++ +P  G     REDVN HI  
Sbjct: 269 TKDKEPSSS--DSSTTSTPT--STISSTDWCPLDDNIEVTLPSTGENCVSREDVNAHIQT 328

Query: 304 VLYGSTTERTKKRLPVFVQI 305
           VLYG++    +KRLP  + +
Sbjct: 329 VLYGTS---GRKRLPACIDL 334

[Close]
BLAST of CSPI07G08160 vs. TrEMBL
Match: A5B230_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026075 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31
Identity = 107/271 (39.48%), Postives = 148/271 (54.61%), Query Frame = 1 

Query: 57  NIMNHYA-SSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTP-MKVDEEVIVM 116
           +++ HY  SS+ G  S  SRG     SPLS +ENLE  P        TP +KV+E+V+VM
Sbjct: 57  SLLTHYQHSSSDGLGSLPSRG-----SPLSLVENLEVTP--------TPAVKVEEDVLVM 116

Query: 117 DGILISSIHGEAKTVRSPLDSGTGGG------GKNQYRSDICRYWEDSGTCRFGNKCQFA 176
           DGI++ S+ G  K +RS     +G        G   Y+++ICR WED  +CR+G KCQFA
Sbjct: 117 DGIMVESMAG-MKGMRSVSSDSSGSSSAAAASGNGLYKTEICRSWEDLASCRYGAKCQFA 176

Query: 177 HGKEDLRPGRLPVRTK------TKFSET----YGSKFRNNHSLTGIAATT-TTQSNSNLV 236
           HGKE+LRP R  +RT+       +F+ T    YG + R +H +  + +TT  T S S   
Sbjct: 177 HGKEELRPLRYSMRTRPEGNVCKQFAVTGTCPYGPRCRFSHQIQSLLSTTQQTPSPSRPQ 236

Query: 237 DTITKTELSKRGLTPTSSTLKGHTNNNPTLISTISIINWSPEDDGIKIAVPGTEATK--- 296
            T   T   K   TPT +T                  +WSP DDGI++ +PG+ A K   
Sbjct: 237 HTAAXTPTIKTA-TPTKTT-----------------ADWSPMDDGIEVVLPGSSAEKPAS 293

Query: 297 REDVNQHIHEVLYGSTTERTKKRLPVFVQIC 306
           R++VN +I+  LYG TT R  +RLPVF +IC
Sbjct: 297 RDEVNTYINSFLYGPTTPR--RRLPVFEEIC 293

[Close]
BLAST of CSPI07G08160 vs. TAIR10
Match: AT1G66810.1 (AT1G66810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 49.7 bits (117), Expect = 3.9e-06
Identity = 23/65 (35.38%), Postives = 36/65 (55.38%), Query Frame = 1 

Query: 146 RSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE--------TYGSKFRN 203
           ++++C  W+++G C +G+ CQFAHG ++LRP     R KT+            YG +   
Sbjct: 234 KTELCNKWQETGACCYGDNCQFAHGIDELRPVIRHPRYKTEVCRMMVTGAMCPYGHRCHF 293

[Close]
BLAST of CSPI07G08160 vs. NCBI nr
Match: gi|449462413|ref|XP_004148935.1| (PREDICTED: uncharacterized protein LOC101215865 [Cucumis sativus])

HSP 1 Score: 615.5 bits (1586), Expect = 5.0e-173
Identity = 309/312 (99.04%), Postives = 311/312 (99.68%), Query Frame = 1 

Query: 1   MEDRQGKRSSKTSIIKGLNASIRPMNIQMDNHLVIGGTRHYHQETNCKSPTIVDRYNIMN 60
           MEDRQGKRSSKTSIIKGLNASIRPMNIQMDNHLVIGGTRHYHQETNCKSPTIVD YNIMN
Sbjct: 1   MEDRQGKRSSKTSIIKGLNASIRPMNIQMDNHLVIGGTRHYHQETNCKSPTIVDCYNIMN 60

Query: 61  HYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGILIS 120
           HYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGILIS
Sbjct: 61  HYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGILIS 120

Query: 121 SIHGEAKTVRSPLDSGTGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGRLP 180
           SIHGEAKTVRSPLDSG+GGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGRLP
Sbjct: 121 SIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGRLP 180

Query: 181 VRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKRGLTPTSSTLKGH 240
           VRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKRGLTPTSSTLKGH
Sbjct: 181 VRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKRGLTPTSSTLKGH 240

Query: 241 TNNNPTLISTISIINWSPEDDGIKIAVPGTEATKREDVNQHIHEVLYGSTTERTKKRLPV 300
           TNNNPTLISTISIINWSPEDDGIKIAVPGTE+TKREDVNQHIHEVLYGSTTERTKKRLPV
Sbjct: 241 TNNNPTLISTISIINWSPEDDGIKIAVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPV 300

Query: 301 FVQICSEELQEE 313
           FVQICSEELQEE
Sbjct: 301 FVQICSEELQEE 312

[Close]
BLAST of CSPI07G08160 vs. NCBI nr
Match: gi|700188781|gb|KGN44014.1| (hypothetical protein Csa_7G103290 [Cucumis sativus])

HSP 1 Score: 501.9 bits (1291), Expect = 8.1e-139
Identity = 252/254 (99.21%), Postives = 254/254 (100.00%), Query Frame = 1 

Query: 59  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGIL 118
           MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGIL
Sbjct: 1   MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGIL 60

Query: 119 ISSIHGEAKTVRSPLDSGTGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGR 178
           ISSIHGEAKTVRSPLDSG+GGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGR
Sbjct: 61  ISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGR 120

Query: 179 LPVRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKRGLTPTSSTLK 238
           LPVRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKRGLTPTSSTLK
Sbjct: 121 LPVRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKRGLTPTSSTLK 180

Query: 239 GHTNNNPTLISTISIINWSPEDDGIKIAVPGTEATKREDVNQHIHEVLYGSTTERTKKRL 298
           GHTNNNPTLISTISIINWSPEDDGIKIAVPGTE+TKREDVNQHIHEVLYGSTTERTKKRL
Sbjct: 181 GHTNNNPTLISTISIINWSPEDDGIKIAVPGTESTKREDVNQHIHEVLYGSTTERTKKRL 240

Query: 299 PVFVQICSEELQEE 313
           PVFVQICSEELQEE
Sbjct: 241 PVFVQICSEELQEE 254

[Close]
BLAST of CSPI07G08160 vs. NCBI nr
Match: gi|720016204|ref|XP_010261083.1| (PREDICTED: uncharacterized protein LOC104599994 [Nelumbo nucifera])

HSP 1 Score: 167.5 bits (423), Expect = 3.6e-38
Identity = 100/239 (41.84%), Postives = 138/239 (57.74%), Query Frame = 1 

Query: 78  GLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGT 137
           G S SPLS+IENLETPP +SP ++ TP+KV+E+V+VMDGIL+ S+ G     RS  DSG+
Sbjct: 100 GSSPSPLSSIENLETPPSKSPPVFATPVKVEEDVLVMDGILVGSVPGGR--TRSGPDSGS 159

Query: 138 GGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPGRLPVRTKTK------FSE-- 197
              G + Y+++ICR WED+G CR+G+KCQFAHGKE+LRP R+  + K++      F+   
Sbjct: 160 SSSGNSLYKTEICRAWEDTGNCRYGSKCQFAHGKEELRPTRVSSKNKSEGQLCKSFATGT 219

Query: 198 -TYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKRGLTPTSSTLKGHTNNNPTLI 257
             YGSK R  H +   + + T  S      T+ K E                        
Sbjct: 220 CAYGSKCRFIHHMAVSSPSRTATSAG--ATTMIKPEQD---------------------- 279

Query: 258 STISIINWSPEDDGIKIAVPGT--EATKREDVNQHIHEVLYGSTTERTKKRLPVFVQIC 306
                 +WSP DDGI++ +P +      REDVN +IH+VLYG +    +KRLPVF +IC
Sbjct: 280 ------DWSPADDGIEVRLPSSTEHCPTREDVNLYIHDVLYGPS---RRKRLPVFAEIC 303

[Close]
BLAST of CSPI07G08160 vs. NCBI nr
Match: gi|502142052|ref|XP_004504769.1| (PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Cicer arietinum])

HSP 1 Score: 164.5 bits (415), Expect = 3.1e-37
Identity = 115/266 (43.23%), Postives = 152/266 (57.14%), Query Frame = 1 

Query: 59  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGIL 118
           M  Y +++SG++SFGSRG  LSLSPLS+IEN+E  P+ SP +YGTP+KVDEEVIVMD I 
Sbjct: 94  MQQYCATSSGNSSFGSRGR-LSLSPLSSIENMEIKPLMSPPMYGTPVKVDEEVIVMDDIQ 153

Query: 119 ISSIHGEAKTVRSPLDSGTGGGG------KNQYRSDICRYWEDSGTCRFGNKCQFAHGKE 178
           +  + G  K  RS   S + G G      K+ Y++DICR WE+SG CR+ +KCQFAHG+E
Sbjct: 154 VRPMSG-GKNGRSSSSSSSRGSGSSSSSSKSVYKTDICRAWEESGNCRYNSKCQFAHGRE 213

Query: 179 DLRPGRLPVRTKTKFSE----------TYGSKFRNNHSLTGIAATTTTQSNSNLVDTITK 238
           +L P RL +++K++             TYG   R  H    +     T+S   L   IT 
Sbjct: 214 ELHPSRL-MKSKSEAQTSKLSIRLGQGTYGPNSRVVHEHPAV-----TESECALTGLITS 273

Query: 239 TELSKRGLTPTSSTLKGHTNNNPTLISTISIIN-WSPEDDGIKIAVP--GTEATKREDVN 298
              S     P  ST   H N+N        IIN WSP DDGI + +P    +   RE+V+
Sbjct: 274 QPASPE---PYRST---HANSN--------IINDWSPLDDGIDVVLPNGSDKVPSREEVD 333

Query: 299 QHIHEVLYGSTTERTKKRLPVFVQIC 306
            +I  +L   T   TK+RLPVFV IC
Sbjct: 334 AYIFGLLNEPT---TKRRLPVFVAIC 334

[Close]
BLAST of CSPI07G08160 vs. NCBI nr
Match: gi|697160674|ref|XP_009589110.1| (PREDICTED: tristetraprolin-like [Nicotiana tomentosiformis])

HSP 1 Score: 161.0 bits (406), Expect = 3.4e-36
Identity = 106/262 (40.46%), Postives = 150/262 (57.25%), Query Frame = 1 

Query: 64  SSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGILISSIH 123
           +++SGS S GS G G+  SPL++IEN+E      P  + TP+KV+E+V+VMDGIL+   H
Sbjct: 88  NTSSGSRS-GSGGGGVFRSPLASIENIEI-----PTAFRTPVKVEEDVVVMDGILVEPKH 147

Query: 124 G-EAKTVRSPLDSG------TGGGGKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRP 183
           G  AK++ S  DSG      T G   + ++S++CR+W D+GTCRFG+KC+F HGKEDLRP
Sbjct: 148 GARAKSLPSTSDSGGRLSSSTSGSENSSHKSEVCRWWGDTGTCRFGSKCRFVHGKEDLRP 207

Query: 184 ---------GRLPVRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSK 243
                      L  R+ +  S  YG + R+ H     AA++T  +      T+ K   +K
Sbjct: 208 TAFANRNHSEALSSRSYSSGSRAYGPRGRSVHHQVHSAASSTESAAMATPTTVKKVVSTK 267

Query: 244 RGLTPTSSTLKGHTNNNPTLISTISIINWSPEDDGIKIAVP--GTEATKREDVNQHIHEV 303
               P+S +    T    T    IS  +WSP DD I++++P  G +   REDVN HI  V
Sbjct: 268 DKEPPSSDSSPSST----TSTIVISGTDWSPLDDNIEVSLPSSGEKCPSREDVNAHIQTV 327

Query: 304 LYGSTTERTKKRLPVFVQICSE 308
           LYG +    +KRLPVFV+   E
Sbjct: 328 LYGLS---GRKRLPVFVEFSEE 336

The following BLAST results are available for this feature:
BLAST of CSPI07G08160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TISD_HUMAN5.6e-0743.10Zinc finger protein 36, C3H1 type-like 2 OS=Homo sapiens GN=ZFP36L2 PE=1 SV=3[more]
TISB_HUMAN2.8e-0638.71Zinc finger protein 36, C3H1 type-like 1 OS=Homo sapiens GN=ZFP36L1 PE=1 SV=1[more]
TISD_MOUSE2.8e-0641.38Zinc finger protein 36, C3H1 type-like 2 OS=Mus musculus GN=Zfp36l2 PE=1 SV=2[more]
TISB_MOUSE4.7e-0637.50Zinc finger protein 36, C3H1 type-like 1 OS=Mus musculus GN=Zfp36l1 PE=2 SV=1[more]
TISB_RAT4.7e-0637.50Zinc finger protein 36, C3H1 type-like 1 OS=Rattus norvegicus GN=Zfp36l1 PE=2 SV... [more]
BLAST of CSPI07G08160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K529_CUCSA5.6e-13999.21Uncharacterized protein OS=Cucumis sativus GN=Csa_7G103290 PE=4 SV=1[more]
A0A068TMK5_COFCA1.4e-3333.43Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014834001 PE=4 SV=1[more]
A0A0V0IC54_SOLCH4.1e-3340.08Putative zinc finger protein 36, C3H1 type-like 1-like OS=Solanum chacoense PE=4... [more]
M1C8I4_SOLTU2.1e-3240.38Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024171 PE=4 SV=1[more]
A5B230_VITVI1.0e-3139.48Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026075 PE=4 SV=1[more]
BLAST of CSPI07G08160 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66810.13.9e-0635.38 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of CSPI07G08160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462413|ref|XP_004148935.1|5.0e-17399.04PREDICTED: uncharacterized protein LOC101215865 [Cucumis sativus][more]
gi|700188781|gb|KGN44014.1|8.1e-13999.21hypothetical protein Csa_7G103290 [Cucumis sativus][more]
gi|720016204|ref|XP_010261083.1|3.6e-3841.84PREDICTED: uncharacterized protein LOC104599994 [Nelumbo nucifera][more]
gi|502142052|ref|XP_004504769.1|3.1e-3743.23PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Cicer arietinum][more]
gi|697160674|ref|XP_009589110.1|3.4e-3640.46PREDICTED: tristetraprolin-like [Nicotiana tomentosiformis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G08160.1CSPI07G08160.1mRNA
CSPI07G08160.2CSPI07G08160.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 143..176
score: 1.6
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 145..171
score: 8.
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 144..171
score: 1.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 144..172
score: 16
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 144..176
score: 7.3
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 145..282
score: 2.3
NoneNo IPR availablePANTHERPTHR12547:SF60ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14-RELATEDcoord: 145..282
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G08160Cla003307Watermelon (97103) v1cpiwmB579
CSPI07G08160Csa7G103290Cucumber (Chinese Long) v2cpicuB354
CSPI07G08160MELO3C024933Melon (DHL92) v3.5.1cpimeB530
CSPI07G08160ClCG09G021270Watermelon (Charleston Gray)cpiwcgB548
CSPI07G08160Lsi02G018340Bottle gourd (USVL1VR-Ls)cpilsiB526
CSPI07G08160MELO3C024933.2Melon (DHL92) v3.6.1cpimedB533
CSPI07G08160Cla97C09G182680Watermelon (97103) v2cpiwmbB591
CSPI07G08160Bhi09G001474Wax gourdcpiwgoB709
CSPI07G08160CsGy7G007740Cucumber (Gy14) v2cgybcpiB332
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G08160Cucumber (Chinese Long) v3cpicucB415
CSPI07G08160Wild cucumber (PI 183967)cpicpiB094