CSPI07G06390 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G06390
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionE3 ubiquitin-protein ligase RING1-like protein
LocationChr7 : 4693794 .. 4694600 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCACAAATCTTTGATATGTGTATGAATCGTCCCTTCGTCGGCATGTCACTAAAAATCAAGGACTCCATCACCAGCCTGCATCGAACACGAAAACGAATACGAACTCGACGAAACTCATCAAAATATGTCGAACACATCGACCTTAATTTCAAAGTCCAACTCAGATGCACTCACGTTCTTCAAGAATATGAAGATGGCATAATGACTACAACAAGTTTCCTTCATGAACACACATCTTCATCGCATCCTTTAGCAACTTACCAACTTCCTATCTCCATCTTCAAGAACGGCAACAGCACTTTGGAGCAATATCTTTGTGATAGGTTGCATGCACATCGAGAACTCATTGACATTACACTTGTGGCTGATAGAATAATACAGCATTGGGTTAAAAAGGTTGAAGAAGATGATTGTGATCATGATGAAGAAAAGAATAATGAAGACTTTAATGTATTTCAAAAGATTCATTCTCTTGAAATTACGTTAGAGATGAAGATTAATAGGAGGTATGTTGTAGAATCACCGGTAATGATAATGGTTCCAACAAGTGATGATGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATGAAATAAGAAGATTAGGGTGTGATGAGGAGGGAATTGAATGTGCAATTTGTTTGGAGGAAATAAGTAGTGATAAAGAGGAGGAAGGAAGTGAGAAATCAGTGTTGCAAATGCCATGTTTGCATATTTTTCATGAAGAATGTATAGATAAATGGTTGAGGACAAGTCATTATTGCCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

mRNA sequence

ATGGCAGCACAAATCTTTGATATGTGTATGAATCGTCCCTTCGTCGGCATGTCACTAAAAATCAAGGACTCCATCACCAGCCTGCATCGAACACGAAAACGAATACGAACTCGACGAAACTCATCAAAATATGTCGAACACATCGACCTTAATTTCAAAGTCCAACTCAGATGCACTCACGTTCTTCAAGAATATGAAGATGGCATAATGACTACAACAAGTTTCCTTCATGAACACACATCTTCATCGCATCCTTTAGCAACTTACCAACTTCCTATCTCCATCTTCAAGAACGGCAACAGCACTTTGGAGCAATATCTTTGTGATAGGTTGCATGCACATCGAGAACTCATTGACATTACACTTGTGGCTGATAGAATAATACAGCATTGGGTTAAAAAGGTTGAAGAAGATGATTGTGATCATGATGAAGAAAAGAATAATGAAGACTTTAATGTATTTCAAAAGATTCATTCTCTTGAAATTACGTTAGAGATGAAGATTAATAGGAGGTATGTTGTAGAATCACCGGTAATGATAATGGTTCCAACAAGTGATGATGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATGAAATAAGAAGATTAGGGTGTGATGAGGAGGGAATTGAATGTGCAATTTGTTTGGAGGAAATAAGTAGTGATAAAGAGGAGGAAGGAAGTGAGAAATCAGTGTTGCAAATGCCATGTTTGCATATTTTTCATGAAGAATGTATAGATAAATGGTTGAGGACAAGTCATTATTGCCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Coding sequence (CDS)

ATGGCAGCACAAATCTTTGATATGTGTATGAATCGTCCCTTCGTCGGCATGTCACTAAAAATCAAGGACTCCATCACCAGCCTGCATCGAACACGAAAACGAATACGAACTCGACGAAACTCATCAAAATATGTCGAACACATCGACCTTAATTTCAAAGTCCAACTCAGATGCACTCACGTTCTTCAAGAATATGAAGATGGCATAATGACTACAACAAGTTTCCTTCATGAACACACATCTTCATCGCATCCTTTAGCAACTTACCAACTTCCTATCTCCATCTTCAAGAACGGCAACAGCACTTTGGAGCAATATCTTTGTGATAGGTTGCATGCACATCGAGAACTCATTGACATTACACTTGTGGCTGATAGAATAATACAGCATTGGGTTAAAAAGGTTGAAGAAGATGATTGTGATCATGATGAAGAAAAGAATAATGAAGACTTTAATGTATTTCAAAAGATTCATTCTCTTGAAATTACGTTAGAGATGAAGATTAATAGGAGGTATGTTGTAGAATCACCGGTAATGATAATGGTTCCAACAAGTGATGATGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATGAAATAAGAAGATTAGGGTGTGATGAGGAGGGAATTGAATGTGCAATTTGTTTGGAGGAAATAAGTAGTGATAAAGAGGAGGAAGGAAGTGAGAAATCAGTGTTGCAAATGCCATGTTTGCATATTTTTCATGAAGAATGTATAGATAAATGGTTGAGGACAAGTCATTATTGCCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA
Homology
[Close]
BLAST of CSPI07G06390 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09
Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = 1 

Query: 183 PTSDDAIESMLR-RVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHI 242
           P S  AI+++   +V  D ++      E  +CA+C++E      E+GS+  V QMPC H+
Sbjct: 190 PASKSAIDALPTVKVTKDMLK-----SEMNQCAVCMDEF-----EDGSD--VKQMPCKHV 249

Query: 243 FHEECIDKWLRTSHYCPTCRFSMPTNN 269
           FH++C+  WL   + CP CRF +PT++
Sbjct: 250 FHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]
BLAST of CSPI07G06390 vs. Swiss-Prot
Match: SIS3_ARATH (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 1 

Query: 177 PVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQM 236
           P + + P   +A+E++++ +    ++ +  D+ G EC ICLEE     E  G       +
Sbjct: 201 PGLYLTPAQTEAVEALIQELPKFRLKAVP-DDCG-ECLICLEEFHIGHEVRG-------L 260

Query: 237 PCLHIFHEECIDKWLRTSHYCPTCRFSM 265
           PC H FH ECID+WLR +  CP CR S+
Sbjct: 261 PCAHNFHVECIDQWLRLNVKCPRCRCSV 279

[Close]
BLAST of CSPI07G06390 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.7e-08
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = 1 

Query: 183 PTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHIF 242
           P S  AIE++        I +   + E  +CA+C+++      EEG+E    QMPC H++
Sbjct: 198 PASKSAIEAL----PLVNITKSNLNSEFNQCAVCMDDF-----EEGTEAK--QMPCKHLY 257

Query: 243 HEECIDKWLRTSHYCPTCRFSMPTNN 269
           H++C+  WL   + CP CR  +PT++
Sbjct: 258 HKDCLLPWLELHNSCPVCRHELPTDD 272

[Close]
BLAST of CSPI07G06390 vs. Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.7e-08
Identity = 27/86 (31.40%), Postives = 46/86 (53.49%), Query Frame = 1 

Query: 183 PTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHIF 242
           P +   +ES+ R V       +   +  ++C +CL E         +E++V++MPC H+F
Sbjct: 65  PAAKAVVESLPRTV-------ISSAKADLKCPVCLLEFE-------AEETVIEMPCHHLF 124

Query: 243 HEECIDKWLRTSHYCPTCRFSMPTNN 269
           H  CI  WL  ++ CP CR  +PT++
Sbjct: 125 HSNCILPWLSKTNSCPLCRHELPTDD 136

[Close]
BLAST of CSPI07G06390 vs. Swiss-Prot
Match: ATL30_ARATH (RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.7e-08
Identity = 28/67 (41.79%), Postives = 39/67 (58.21%), Query Frame = 1 

Query: 201 IRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHIFHEECIDKWLRTSHYCPTC 260
           ++ L  D+ G+ECAICL E      EE      L   C H+FH+ECID+WL ++  CP C
Sbjct: 102 VKDLREDKYGLECAICLLEF-----EEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVC 161

Query: 261 RFSMPTN 268
           R ++  N
Sbjct: 162 RRNLDPN 163

[Close]
BLAST of CSPI07G06390 vs. TrEMBL
Match: A0A0A0K7L5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068590 PE=4 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 1.1e-151
Identity = 266/268 (99.25%), Postives = 268/268 (100.00%), Query Frame = 1 

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
           VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADRIIQHWVKKVEEDDCDHDEE+NNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 IFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           +FHEECIDKWLRTSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

[Close]
BLAST of CSPI07G06390 vs. TrEMBL
Match: A0A0A0K2A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.2e-66
Identity = 139/270 (51.48%), Postives = 188/270 (69.63%), Query Frame = 1 

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MA +IFD C    ++GM L+I D      R + +IRTRRNS  + + IDLNF+VQL+C H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
             Q  E+    TT+ + EH  S HP AT++LPISI ++G+ TL+  L    H +R++I+I
Sbjct: 61  -FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEM---KINRRYVVESP 180
             + D II++WV KVEE++   ++++N+    VF+KI+ LEITLE+   +I R    +  
Sbjct: 121 EHLVDEIIKYWVTKVEEEE---EDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQ 180

Query: 181 VMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMP 240
           V++MVPTSD A+ESML+RVEN+EI +LG D++ I C ICLEEI   KEE+GSE  VLQMP
Sbjct: 181 VLMMVPTSDSAMESMLKRVENEEIMKLG-DDDCIHCVICLEEIG--KEEKGSEGVVLQMP 240

Query: 241 CLHIFHEECIDKWLRTSHYCPTCRFSMPTN 268
           CLH+FH ECI+KWL TSHYCPTCRF MP N
Sbjct: 241 CLHVFHGECINKWLNTSHYCPTCRFPMPIN 263

[Close]
BLAST of CSPI07G06390 vs. TrEMBL
Match: A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.8e-64
Identity = 141/280 (50.36%), Postives = 187/280 (66.79%), Query Frame = 1 

Query: 1   MAAQIFDMCM--NRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRC 60
           MA QIF  C   +  ++GMSL+I D     H+ + +IRT  NS   V+ IDLNFKV+++C
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLR-HQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  THVLQEYEDGIMT-TTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHREL 120
            H  Q  E G  T  T+ L EH SS HPL T QLP+SIFK+G+ TL++ L      +R +
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 IDITLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINR------- 180
           I+I LV D II+HWVKKV+E+         N    VF++I+ LEIT+E+ + +       
Sbjct: 121 INIELVVDEIIKHWVKKVDEE---------NSTSQVFEEIYPLEITIELLVYQMIHAIDQ 180

Query: 181 --RYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEG 240
               +++ P ++MVPTS+ A+ESML++VEN+EI + G D + I C ICLEEIS  KE++G
Sbjct: 181 PHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFG-DNKSINCVICLEEIS--KEKKG 240

Query: 241 SEKSVLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           SE  VLQMPCLH+FHEECI KWL+ SHYCPTCRFSMPTNN
Sbjct: 241 SEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of CSPI07G06390 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.3e-61
Identity = 137/276 (49.64%), Postives = 182/276 (65.94%), Query Frame = 1 

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MA Q FD C +  ++GMSL+I D I          +TR NS   V+ IDLNFKV+++C H
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDPI----------QTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
                ED    TT FL EH  +  P    QLP+SIFK+G+ TL++ L  +    R +I+I
Sbjct: 61  FQAGEEDTTFATT-FLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINR--------RY 180
            LV D+II+HWVKKVE+D      ++NN    VF++I+ LEIT+E+ + +        + 
Sbjct: 121 ELVTDQIIKHWVKKVEDD------KENNS--GVFEEIYPLEITIEVLVLQMIDAVDQPQE 180

Query: 181 VVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKS 240
            ++ P + MVPTSD A++SML+RVEN+EI ++G D + I C ICLE+IS  KEE+GSE  
Sbjct: 181 TIDQPQVRMVPTSDSAMKSMLKRVENEEIMKVG-DYKSISCVICLEKIS--KEEKGSEGV 240

Query: 241 VLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           VLQMPCLH+FHEECI KWL+TSHYCPTCRFSM  NN
Sbjct: 241 VLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]
BLAST of CSPI07G06390 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.0e-59
Identity = 135/276 (48.91%), Postives = 189/276 (68.48%), Query Frame = 1 

Query: 1   MAAQIFDMCM--NRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRC 60
           MA +IF++C   +  ++GMSL+I D     H+   +I  + +S   VE I L FKVQL+C
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDP-NPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKC 60

Query: 61  THVLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELI 120
            H  Q +E G   +T+ + EH  S H  AT+QLPISIFK+G+ TL++ L      + ++I
Sbjct: 61  QH-FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120

Query: 121 DITLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPV 180
           +I L+A+ II+HWV+KVEE++   D+E N+    +F+KI+ LEI + + +++      P 
Sbjct: 121 NIELLANEIIKHWVRKVEEEE---DQENNSNV--LFKKIYPLEIMIRLLVSKMIRAVQPR 180

Query: 181 M------IMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKS 240
           +      +MVPTSD A+ESML+RVEN+EI + G D+E I C +CLEEIS  KEE+GSE +
Sbjct: 181 LAMIDQPLMVPTSDSAVESMLKRVENEEIMKSG-DDESINCVVCLEEIS--KEEKGSETT 240

Query: 241 VLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           VLQMPCLH+FHEECI KWL+TSHYCPTCRFSMP +N
Sbjct: 241 VLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]
BLAST of CSPI07G06390 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-10
Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = 1 

Query: 183 PTSDDAIESMLR-RVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHI 242
           P S  AI+++   +V  D ++      E  +CA+C++E      E+GS+  V QMPC H+
Sbjct: 190 PASKSAIDALPTVKVTKDMLK-----SEMNQCAVCMDEF-----EDGSD--VKQMPCKHV 249

Query: 243 FHEECIDKWLRTSHYCPTCRFSMPTNN 269
           FH++C+  WL   + CP CRF +PT++
Sbjct: 250 FHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]
BLAST of CSPI07G06390 vs. TAIR10
Match: AT4G18110.1 (AT4G18110.1 RING/U-box superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.8e-10
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 1 

Query: 189 IESMLRRVENDEIRRLGCDEEGI------ECAICLEEISSDKEEEGSEKSVLQMPCLHIF 248
           +E +L  + +D +R    D +G       EC ICLEE++S     GSE+ ++++ C H F
Sbjct: 125 VEVVLETLYSDWLRVNDYDSQGCLIPIEEECIICLEELASS----GSERRIMKLLCSHSF 184

Query: 249 HEECIDKWLRTSHYCPTCR 262
           H++CI  WLR    CPTCR
Sbjct: 185 HKDCILPWLRCKRSCPTCR 199

[Close]
BLAST of CSPI07G06390 vs. TAIR10
Match: AT1G18770.1 (AT1G18770.1 RING/U-box superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 6.5e-10
Identity = 30/83 (36.14%), Postives = 43/83 (51.81%), Query Frame = 1 

Query: 183 PTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHIF 242
           P S   ++S+ R+     I ++     G  C ICLEE S  +        V+ +PC H F
Sbjct: 34  PASKLVVKSLARK-----IYKMTTSSTGEMCIICLEEFSEGRR-------VVTLPCGHDF 93

Query: 243 HEECIDKWLRTSHYCPTCRFSMP 266
            +EC+ KW  T+H CP CRF +P
Sbjct: 94  DDECVLKWFETNHSCPLCRFKLP 104

[Close]
BLAST of CSPI07G06390 vs. TAIR10
Match: AT3G47990.1 (AT3G47990.1 SUGAR-INSENSITIVE 3)

HSP 1 Score: 62.0 bits (149), Expect = 6.5e-10
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 1 

Query: 177 PVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQM 236
           P + + P   +A+E++++ +    ++ +  D+ G EC ICLEE     E  G       +
Sbjct: 201 PGLYLTPAQTEAVEALIQELPKFRLKAVP-DDCG-ECLICLEEFHIGHEVRG-------L 260

Query: 237 PCLHIFHEECIDKWLRTSHYCPTCRFSM 265
           PC H FH ECID+WLR +  CP CR S+
Sbjct: 261 PCAHNFHVECIDQWLRLNVKCPRCRCSV 279

[Close]
BLAST of CSPI07G06390 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-09
Identity = 39/97 (40.21%), Postives = 51/97 (52.58%), Query Frame = 1 

Query: 171 RYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSE 230
           R ++ES      P S  +I++M   VE D     GC+ E   C ICLEE  S       E
Sbjct: 80  RSLLESREEGRPPASKASIDAM-PIVEID-----GCEGE---CVICLEEWKS-------E 139

Query: 231 KSVLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTN 268
           ++V +MPC H FH  CI+KWL     CP CR+ MP +
Sbjct: 140 ETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]
BLAST of CSPI07G06390 vs. NCBI nr
Match: gi|778730185|ref|XP_011659722.1| (PREDICTED: uncharacterized protein LOC105436242 [Cucumis sativus])

HSP 1 Score: 543.9 bits (1400), Expect = 1.6e-151
Identity = 266/268 (99.25%), Postives = 268/268 (100.00%), Query Frame = 1 

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
           VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADRIIQHWVKKVEEDDCDHDEE+NNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 IFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           +FHEECIDKWLRTSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

[Close]
BLAST of CSPI07G06390 vs. NCBI nr
Match: gi|659111001|ref|XP_008455524.1| (PREDICTED: RING-H2 finger protein ATL30-like [Cucumis melo])

HSP 1 Score: 364.4 bits (934), Expect = 1.7e-97
Identity = 183/241 (75.93%), Postives = 207/241 (85.89%), Query Frame = 1 

Query: 28  LHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTHVLQEYEDGIMTTTSFLHEHTSSSHPLA 87
           ++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H L  YEDGI TTTSFL+EHTS  HPLA
Sbjct: 1   MNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSHFLV-YEDGITTTTSFLNEHTSRPHPLA 60

Query: 88  TYQLPISIFKNGNSTLEQYLCDRLHAHRELIDITLVADRIIQHWVKKVEEDDCDHDEEKN 147
           TY+LPISIFK+G+  LEQYL  + H +RE I+ TLVADR+IQHWVK+VEEDD +H EE N
Sbjct: 61  TYKLPISIFKHGDKALEQYLFHKFHVYREFINTTLVADRLIQHWVKRVEEDDHEHQEENN 120

Query: 148 NEDFNVFQKIHSLEITLEMKINRRYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCD 207
           N DFNVFQKI+ LEITLEM+I +RYV ESP+MIMVPTSD AIESMLRRVEND       D
Sbjct: 121 NHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVEND------WD 180

Query: 208 EEGIECAICLEEISSDKEEEGSEKSVLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTN 267
           +EGI C ICLEEISS KEEE SEKSVLQMPCLH+FH ECI+KWL+TSHYCPTCRFSMPTN
Sbjct: 181 DEGINCVICLEEISS-KEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTN 233

Query: 268 N 269
           N
Sbjct: 241 N 233

[Close]
BLAST of CSPI07G06390 vs. NCBI nr
Match: gi|700188572|gb|KGN43805.1| (hypothetical protein Csa_7G068580 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 4.6e-66
Identity = 139/270 (51.48%), Postives = 188/270 (69.63%), Query Frame = 1 

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MA +IFD C    ++GM L+I D      R + +IRTRRNS  + + IDLNF+VQL+C H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
             Q  E+    TT+ + EH  S HP AT++LPISI ++G+ TL+  L    H +R++I+I
Sbjct: 61  -FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEM---KINRRYVVESP 180
             + D II++WV KVEE++   ++++N+    VF+KI+ LEITLE+   +I R    +  
Sbjct: 121 EHLVDEIIKYWVTKVEEEE---EDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQ 180

Query: 181 VMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMP 240
           V++MVPTSD A+ESML+RVEN+EI +LG D++ I C ICLEEI   KEE+GSE  VLQMP
Sbjct: 181 VLMMVPTSDSAMESMLKRVENEEIMKLG-DDDCIHCVICLEEIG--KEEKGSEGVVLQMP 240

Query: 241 CLHIFHEECIDKWLRTSHYCPTCRFSMPTN 268
           CLH+FH ECI+KWL TSHYCPTCRF MP N
Sbjct: 241 CLHVFHGECINKWLNTSHYCPTCRFPMPIN 263

[Close]
BLAST of CSPI07G06390 vs. NCBI nr
Match: gi|700188568|gb|KGN43801.1| (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 2.5e-64
Identity = 141/280 (50.36%), Postives = 187/280 (66.79%), Query Frame = 1 

Query: 1   MAAQIFDMCM--NRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRC 60
           MA QIF  C   +  ++GMSL+I D     H+ + +IRT  NS   V+ IDLNFKV+++C
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLR-HQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  THVLQEYEDGIMT-TTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHREL 120
            H  Q  E G  T  T+ L EH SS HPL T QLP+SIFK+G+ TL++ L      +R +
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 IDITLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINR------- 180
           I+I LV D II+HWVKKV+E+         N    VF++I+ LEIT+E+ + +       
Sbjct: 121 INIELVVDEIIKHWVKKVDEE---------NSTSQVFEEIYPLEITIELLVYQMIHAIDQ 180

Query: 181 --RYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEG 240
               +++ P ++MVPTS+ A+ESML++VEN+EI + G D + I C ICLEEIS  KE++G
Sbjct: 181 PHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFG-DNKSINCVICLEEIS--KEKKG 240

Query: 241 SEKSVLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           SE  VLQMPCLH+FHEECI KWL+ SHYCPTCRFSMPTNN
Sbjct: 241 SEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of CSPI07G06390 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 7.6e-61
Identity = 137/276 (49.64%), Postives = 182/276 (65.94%), Query Frame = 1 

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MA Q FD C +  ++GMSL+I D I          +TR NS   V+ IDLNFKV+++C H
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDPI----------QTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
                ED    TT FL EH  +  P    QLP+SIFK+G+ TL++ L  +    R +I+I
Sbjct: 61  FQAGEEDTTFATT-FLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINR--------RY 180
            LV D+II+HWVKKVE+D      ++NN    VF++I+ LEIT+E+ + +        + 
Sbjct: 121 ELVTDQIIKHWVKKVEDD------KENNS--GVFEEIYPLEITIEVLVLQMIDAVDQPQE 180

Query: 181 VVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKS 240
            ++ P + MVPTSD A++SML+RVEN+EI ++G D + I C ICLE+IS  KEE+GSE  
Sbjct: 181 TIDQPQVRMVPTSDSAMKSMLKRVENEEIMKVG-DYKSISCVICLEKIS--KEEKGSEGV 240

Query: 241 VLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           VLQMPCLH+FHEECI KWL+TSHYCPTCRFSM  NN
Sbjct: 241 VLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMTINN 254

The following BLAST results are available for this feature:
BLAST of CSPI07G06390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNG1L_ARATH1.8e-0936.78E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
SIS3_ARATH1.1e-0836.36E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2[more]
RING1_GOSHI5.7e-0833.72E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RN181_MOUSE9.7e-0831.40E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1[more]
ATL30_ARATH9.7e-0841.79RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2 SV=1[more]
BLAST of CSPI07G06390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7L5_CUCSA1.1e-15199.25Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068590 PE=4 SV=1[more]
A0A0A0K2A5_CUCSA3.2e-6651.48Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1[more]
A0A0A0K7L0_CUCSA1.8e-6450.36Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1[more]
A0A0A0K2A1_CUCSA5.3e-6149.64Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
E5GCQ3_CUCME1.0e-5948.91Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of CSPI07G06390 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.11.0e-1036.78 RING/U-box superfamily protein[more]
AT4G18110.13.8e-1039.24 RING/U-box superfamily protein[more]
AT1G18770.16.5e-1036.14 RING/U-box superfamily protein[more]
AT3G47990.16.5e-1036.36 SUGAR-INSENSITIVE 3[more]
AT1G26800.12.5e-0940.21 RING/U-box superfamily protein[more]
BLAST of CSPI07G06390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730185|ref|XP_011659722.1|1.6e-15199.25PREDICTED: uncharacterized protein LOC105436242 [Cucumis sativus][more]
gi|659111001|ref|XP_008455524.1|1.7e-9775.93PREDICTED: RING-H2 finger protein ATL30-like [Cucumis melo][more]
gi|700188572|gb|KGN43805.1|4.6e-6651.48hypothetical protein Csa_7G068580 [Cucumis sativus][more]
gi|700188568|gb|KGN43801.1|2.5e-6450.36hypothetical protein Csa_7G067560 [Cucumis sativus][more]
gi|700188567|gb|KGN43800.1|7.6e-6149.64hypothetical protein Csa_7G067550 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06390.1CSPI07G06390.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 212..261
score: 1.5
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 213..260
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 213..261
score: 13
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 212..261
score: 6.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 207..266
score: 8.0
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 181..268
score: 2.5
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 212..265
score: 1.16

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G06390Bottle gourd (USVL1VR-Ls)cpilsiB532
CSPI07G06390Bottle gourd (USVL1VR-Ls)cpilsiB534
CSPI07G06390Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G06390Melon (DHL92) v3.6.1cpimedB558
CSPI07G06390Melon (DHL92) v3.6.1cpimedB523
CSPI07G06390Cucumber (Gy14) v2cgybcpiB332
CSPI07G06390Silver-seed gourdcarcpiB0214
CSPI07G06390Silver-seed gourdcarcpiB0322
CSPI07G06390Silver-seed gourdcarcpiB0414
CSPI07G06390Silver-seed gourdcarcpiB0493
CSPI07G06390Silver-seed gourdcarcpiB0766
CSPI07G06390Silver-seed gourdcarcpiB0767
CSPI07G06390Cucumber (Chinese Long) v3cpicucB415
CSPI07G06390Watermelon (97103) v2cpiwmbB542
CSPI07G06390Watermelon (97103) v2cpiwmbB554
CSPI07G06390Watermelon (97103) v2cpiwmbB584
CSPI07G06390Wax gourdcpiwgoB685
CSPI07G06390Wax gourdcpiwgoB659
CSPI07G06390Wax gourdcpiwgoB672
CSPI07G06390Cucumber (Gy14) v1cgycpiB336
CSPI07G06390Cucurbita maxima (Rimu)cmacpiB143
CSPI07G06390Cucurbita maxima (Rimu)cmacpiB156
CSPI07G06390Cucurbita maxima (Rimu)cmacpiB534
CSPI07G06390Cucurbita maxima (Rimu)cmacpiB541
CSPI07G06390Cucurbita moschata (Rifu)cmocpiB134
CSPI07G06390Cucurbita moschata (Rifu)cmocpiB136
CSPI07G06390Cucurbita moschata (Rifu)cmocpiB525
CSPI07G06390Cucurbita moschata (Rifu)cmocpiB531
CSPI07G06390Cucurbita moschata (Rifu)cmocpiB777
CSPI07G06390Cucumber (Chinese Long) v2cpicuB354
CSPI07G06390Melon (DHL92) v3.5.1cpimeB538
CSPI07G06390Melon (DHL92) v3.5.1cpimeB557
CSPI07G06390Watermelon (Charleston Gray)cpiwcgB541
CSPI07G06390Watermelon (Charleston Gray)cpiwcgB561
CSPI07G06390Watermelon (Charleston Gray)cpiwcgB576
CSPI07G06390Watermelon (Charleston Gray)cpiwcgB599
CSPI07G06390Watermelon (97103) v1cpiwmB574
CSPI07G06390Watermelon (97103) v1cpiwmB594
CSPI07G06390Watermelon (97103) v1cpiwmB596
CSPI07G06390Cucurbita pepo (Zucchini)cpecpiB258
CSPI07G06390Cucurbita pepo (Zucchini)cpecpiB264
CSPI07G06390Cucurbita pepo (Zucchini)cpecpiB472
CSPI07G06390Cucurbita pepo (Zucchini)cpecpiB696
CSPI07G06390Cucurbita pepo (Zucchini)cpecpiB697