CSPI07G06380 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G06380
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionZinc finger-like protein
LocationChr7 : 4689518 .. 4690306 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAACGAATCTTTGATCGTTGTAGGTGTGGTTCCTACATGGGCATGAGACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTCGGGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATCATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTGTTTAAAAAGATTTATCGTCTCGAAATTACGTTAGAGTTGTTGATTTTTCAGATATTTCGTGTAATGGATTATCAACCACAGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACAGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCAATGCCTATAAAT

mRNA sequence

ATGGCCGAACGAATCTTTGATCGTTGTAGGTGTGGTTCCTACATGGGCATGAGACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTCGGGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATCATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTGTTTAAAAAGATTTATCGTCTCGAAATTACGTTAGAGTTGTTGATTTTTCAGATATTTCGTGTAATGGATTATCAACCACAGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACAGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCAATGCCTATAAAT

Coding sequence (CDS)

ATGGCCGAACGAATCTTTGATCGTTGTAGGTGTGGTTCCTACATGGGCATGAGACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTCGGGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATCATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTGTTTAAAAAGATTTATCGTCTCGAAATTACGTTAGAGTTGTTGATTTTTCAGATATTTCGTGTAATGGATTATCAACCACAGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACAGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCAATGCCTATAAAT
Homology
[Close]
BLAST of CSPI07G06380 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.0e-09
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 182 PTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 241
           P S SA+ES L RVE  +     +    +C +C E     E G EG   +MPC H+FHG+
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVF---EAGIEG--REMPCKHIFHGD 249

Query: 242 CINKWLNTSHYCPTCRFPMP 262
           CI  WL+  + CP CRF +P
Sbjct: 250 CIVPWLSIRNSCPVCRFELP 260

[Close]
BLAST of CSPI07G06380 vs. Swiss-Prot
Match: SIS3_ARATH (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.6e-07
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 1 

Query: 178 LMMVPTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEE--IGKEEKGSEGVVLQMPCL 237
           L + P    A+E++++ +    + K   DD   C+ICLEE  IG E +G       +PC 
Sbjct: 203 LYLTPAQTEAVEALIQELPKFRL-KAVPDDCGECLICLEEFHIGHEVRG-------LPCA 262

Query: 238 HVFHGECINKWLNTSHYCPTCR 258
           H FH ECI++WL  +  CP CR
Sbjct: 263 HNFHVECIDQWLRLNVKCPRCR 276

[Close]
BLAST of CSPI07G06380 vs. Swiss-Prot
Match: SDIR1_ARATH (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.1e-07
Identity = 29/91 (31.87%), Postives = 46/91 (50.55%), Query Frame = 1 

Query: 168 FRVMDYQPQVLMMVPTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEG 227
           ++V+D  P+    +    S   S  K +++    K G +D + C +CLE++   E     
Sbjct: 170 YKVLD--PENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGE----- 229

Query: 228 VVLQMPCLHVFHGECINKWLNTSHYCPTCRF 259
           +V  +PCLH FH  CI+ WL     CP C+F
Sbjct: 230 IVRTLPCLHQFHAGCIDPWLRQQGTCPVCKF 253

[Close]
BLAST of CSPI07G06380 vs. Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.0e-07
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 1 

Query: 182 PTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 241
           P + + +ES+ + V      +L       C +CL E  +EE      V++MPC H+FH  
Sbjct: 65  PAAKAVVESLPRTVIRSSKAEL------KCPVCLLEFEEEE-----TVIEMPCHHLFHSN 124

Query: 242 CINKWLNTSHYCPTCRFPMP 262
           CI  WL+ ++ CP CR  +P
Sbjct: 125 CILPWLSKTNSCPLCRHELP 133

[Close]
BLAST of CSPI07G06380 vs. Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 1 

Query: 209 IHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMP 262
           + C +CL E   EE      V++MPC H+FH  CI  WL+ ++ CP CR  +P
Sbjct: 86  LKCPVCLLEFEAEE-----TVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 133

[Close]
BLAST of CSPI07G06380 vs. TrEMBL
Match: A0A0A0K2A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 1.4e-146
Identity = 258/263 (98.10%), Postives = 259/263 (98.48%), Query Frame = 1 

Query: 1   MAERIFDRCRCGSYMGMRLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60
           MAERIFDRCRCGSYMGM+LRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISIFGHGDKTLKLLLFREFHMYRDIINIE 120
           FQIREEETSNTTTLIDEHIVSQHPFATFRLPISI  HGDKTLKLLLFREFHMYRDIINIE
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIFRVMDYQPQVLMM 180
           HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQI RVMDYQPQVLMM
Sbjct: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMM 180

Query: 181 VPTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHG 240
           VPTSDSAMESMLKRVENEEIMKLGDDD IHCVICLEEIGKEEKGSEGVVLQMPCLHVFHG
Sbjct: 181 VPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHG 240

Query: 241 ECINKWLNTSHYCPTCRFPMPIN 264
           ECINKWLNTSHYCPTCRFPMPIN
Sbjct: 241 ECINKWLNTSHYCPTCRFPMPIN 263

[Close]
BLAST of CSPI07G06380 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 9.3e-87
Identity = 180/270 (66.67%), Postives = 210/270 (77.78%), Query Frame = 1 

Query: 1   MAERIFDRCR--CGSYMGMRLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKC 60
           MAE IF+ CR   GSYMGM LRI D P  R +P  QI  + +SPT  +QI L F+VQLKC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITD-PNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKC 60

Query: 61  QHFQIREEETSNTTTLIDEHIVSQHPFATFRLPISIFGHGDKTLKLLLFREFHMYRDIIN 120
           QHFQ+ E    ++TTL+ EHI SQH FATF+LPISIF HGDKTLK +LFREF MY DIIN
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 IEHLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIFRVMDYQPQVL 180
           IE L +EIIK+WV KV EEEEDQEN+ S+ +FKKIY LEI + LL+ ++ R +  QP++ 
Sbjct: 121 IELLANEIIKHWVRKV-EEEEDQENN-SNVLFKKIYPLEIMIRLLVSKMIRAV--QPRLA 180

Query: 181 M-----MVPTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMP 240
           M     MVPTSDSA+ESMLKRVENEEIMK GDD+SI+CV+CLEEI KEEKGSE  VLQMP
Sbjct: 181 MIDQPLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHVFHGECINKWLNTSHYCPTCRFPMPIN 264
           CLH+FH ECI KWL TSHYCPTCRF MPI+
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPID 264

[Close]
BLAST of CSPI07G06380 vs. TrEMBL
Match: A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.6e-86
Identity = 177/274 (64.60%), Postives = 209/274 (76.28%), Query Frame = 1 

Query: 1   MAERIFDRCR--CGSYMGMRLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKC 60
           MAE+IF  CR   GSY+GM LRI D P  R +PQ+QIRT  NSPT  KQIDLNF+V++KC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITD-PDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  QHFQIREEETSNT--TTLIDEHIVSQHPFATFRLPISIFGHGDKTLKLLLFREFHMYRDI 120
           QH+    E  ++T  T L+ EHI S HP  T +LP+SIF HGDKTLK LLFREF +YR I
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 INIEHLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIFRVMDY--- 180
           INIE +VDEIIK+WV KV     D+ENSTS +VF++IY LEIT+ELL++Q+   +D    
Sbjct: 121 INIELVVDEIIKHWVKKV-----DEENSTS-QVFEEIYPLEITIELLVYQMIHAIDQPHE 180

Query: 181 ----QPQVLMMVPTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVV 240
               QPQV MMVPTS+SAMESMLK+VENEEI+K GD+ SI+CVICLEEI KE+KGSE VV
Sbjct: 181 IMMDQPQV-MMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVV 240

Query: 241 LQMPCLHVFHGECINKWLNTSHYCPTCRFPMPIN 264
           LQMPCLH+FH ECI KWL  SHYCPTCRF MP N
Sbjct: 241 LQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTN 266

[Close]
BLAST of CSPI07G06380 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.3e-84
Identity = 169/265 (63.77%), Postives = 205/265 (77.36%), Query Frame = 1 

Query: 1   MAERIFDRCR-CGSYMGMRLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQ 60
           MAE+  D C   G YMGM LRI D  ++ R+PQ+QI+T+ NSP   KQIDLNF++Q+KCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFQIREEETSNTTTLIDEHIVSQHPFATFRLPISIFGHGDKTLKLLLFREFHMYRDIINI 120
           HF   EE ++  TTL+ EHI+SQ  F   +LPISIF  GDKTLK LLF++F M+R I+N+
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 EHLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIFRVMDYQPQVLM 180
           E +VDEIIK+W+ KVEE   DQEN+  SRVF +IY LEI +ELL+ ++   +  QPQ +M
Sbjct: 121 ELVVDEIIKHWIRKVEE---DQENN--SRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVM 180

Query: 181 MVPTSDSAMESMLKRVE-NEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPCLHVF 240
           MVPTSD+AMESMLKRVE NEE+MKLG DDSI CVICLE+IGKEEK S  VVLQMPCLH+F
Sbjct: 181 MVPTSDNAMESMLKRVENNEELMKLG-DDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMF 240

Query: 241 HGECINKWLNTSHYCPTCRFPMPIN 264
           H ECI KWL TSH+CPTCRF MPIN
Sbjct: 241 HEECIRKWLKTSHFCPTCRFSMPIN 259

[Close]
BLAST of CSPI07G06380 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 7.4e-84
Identity = 167/269 (62.08%), Postives = 201/269 (74.72%), Query Frame = 1 

Query: 1   MAERIFDRCRCGSYMGMRLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60
           MAE+ FD C  G YMGM LRI D           I+TR NSPT  KQIDLNF+V++KCQH
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISIFGHGDKTLKLLLFREFHMYRDIINIE 120
           FQ  EE+T+  TT + EHI++  PF   +LP+SIF HGDKTLK LLF++F M+R IINIE
Sbjct: 61  FQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120

Query: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIFRVMDY------Q 180
            + D+IIK+WV KVE+++E+     +S VF++IY LEIT+E+L+ Q+   +D       Q
Sbjct: 121 LVTDQIIKHWVKKVEDDKEN-----NSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQ 180

Query: 181 PQVLMMVPTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPC 240
           PQV  MVPTSDSAM+SMLKRVENEEIMK+GD  SI CVICLE+I KEEKGSEGVVLQMPC
Sbjct: 181 PQV-RMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPC 240

Query: 241 LHVFHGECINKWLNTSHYCPTCRFPMPIN 264
           LH+FH ECI KWL TSHYCPTCRF M IN
Sbjct: 241 LHMFHEECIRKWLKTSHYCPTCRFSMTIN 253

[Close]
BLAST of CSPI07G06380 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 28/53 (52.83%), Postives = 32/53 (60.38%), Query Frame = 1 

Query: 211 CVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPIN 264
           CVICLEE   EE      V +MPC H FHG CI KWL     CP CR+ MP++
Sbjct: 113 CVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]
BLAST of CSPI07G06380 vs. TAIR10
Match: AT3G46620.1 (AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-10
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 182 PTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 241
           P S SA+ES L RVE  +     +    +C +C E     E G EG   +MPC H+FHG+
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVF---EAGIEG--REMPCKHIFHGD 249

Query: 242 CINKWLNTSHYCPTCRFPMP 262
           CI  WL+  + CP CRF +P
Sbjct: 250 CIVPWLSIRNSCPVCRFELP 260

[Close]
BLAST of CSPI07G06380 vs. TAIR10
Match: AT1G14200.1 (AT1G14200.1 RING/U-box superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 30/81 (37.04%), Postives = 42/81 (51.85%), Query Frame = 1 

Query: 182 PTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 241
           P   S +E+M + V  E+  K G      C ICL+E  K +     V  +MPC H FH +
Sbjct: 84  PALKSEVENMPRVVIGEDKEKYGGS----CAICLDEWSKGD-----VAAEMPCKHKFHSK 143

Query: 242 CINKWLNTSHYCPTCRFPMPI 263
           C+ +WL     CP CR+ MP+
Sbjct: 144 CVEEWLGRHATCPMCRYEMPV 155

[Close]
BLAST of CSPI07G06380 vs. TAIR10
Match: AT1G74620.1 (AT1G74620.1 RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 1 

Query: 211 CVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMP 262
           C IC+E+  +       +V ++PC H FHG+CINKWL  +H CP CR  +P
Sbjct: 183 CAICMEDYIE----GSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIP 229

[Close]
BLAST of CSPI07G06380 vs. TAIR10
Match: AT1G18770.1 (AT1G18770.1 RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 1 

Query: 182 PTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 241
           P S   ++S+ +++        G+     C+ICLEE  +  +     V+ +PC H F  E
Sbjct: 34  PASKLVVKSLARKIYKMTTSSTGE----MCIICLEEFSEGRR-----VVTLPCGHDFDDE 93

Query: 242 CINKWLNTSHYCPTCRFPMP 262
           C+ KW  T+H CP CRF +P
Sbjct: 94  CVLKWFETNHSCPLCRFKLP 104

[Close]
BLAST of CSPI07G06380 vs. NCBI nr
Match: gi|700188572|gb|KGN43805.1| (hypothetical protein Csa_7G068580 [Cucumis sativus])

HSP 1 Score: 526.9 bits (1356), Expect = 2.0e-146
Identity = 258/263 (98.10%), Postives = 259/263 (98.48%), Query Frame = 1 

Query: 1   MAERIFDRCRCGSYMGMRLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60
           MAERIFDRCRCGSYMGM+LRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISIFGHGDKTLKLLLFREFHMYRDIINIE 120
           FQIREEETSNTTTLIDEHIVSQHPFATFRLPISI  HGDKTLKLLLFREFHMYRDIINIE
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIFRVMDYQPQVLMM 180
           HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQI RVMDYQPQVLMM
Sbjct: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMM 180

Query: 181 VPTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHG 240
           VPTSDSAMESMLKRVENEEIMKLGDDD IHCVICLEEIGKEEKGSEGVVLQMPCLHVFHG
Sbjct: 181 VPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHG 240

Query: 241 ECINKWLNTSHYCPTCRFPMPIN 264
           ECINKWLNTSHYCPTCRFPMPIN
Sbjct: 241 ECINKWLNTSHYCPTCRFPMPIN 263

[Close]
BLAST of CSPI07G06380 vs. NCBI nr
Match: gi|659111003|ref|XP_008455525.1| (PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo])

HSP 1 Score: 328.2 bits (840), Expect = 1.3e-86
Identity = 180/270 (66.67%), Postives = 210/270 (77.78%), Query Frame = 1 

Query: 1   MAERIFDRCR--CGSYMGMRLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKC 60
           MAE IF+ CR   GSYMGM LRI D P  R +P  QI  + +SPT  +QI L F+VQLKC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITD-PNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKC 60

Query: 61  QHFQIREEETSNTTTLIDEHIVSQHPFATFRLPISIFGHGDKTLKLLLFREFHMYRDIIN 120
           QHFQ+ E    ++TTL+ EHI SQH FATF+LPISIF HGDKTLK +LFREF MY DIIN
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 IEHLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIFRVMDYQPQVL 180
           IE L +EIIK+WV KV EEEEDQEN+ S+ +FKKIY LEI + LL+ ++ R +  QP++ 
Sbjct: 121 IELLANEIIKHWVRKV-EEEEDQENN-SNVLFKKIYPLEIMIRLLVSKMIRAV--QPRLA 180

Query: 181 M-----MVPTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMP 240
           M     MVPTSDSA+ESMLKRVENEEIMK GDD+SI+CV+CLEEI KEEKGSE  VLQMP
Sbjct: 181 MIDQPLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHVFHGECINKWLNTSHYCPTCRFPMPIN 264
           CLH+FH ECI KWL TSHYCPTCRF MPI+
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPID 264

[Close]
BLAST of CSPI07G06380 vs. NCBI nr
Match: gi|700188568|gb|KGN43801.1| (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 6.7e-86
Identity = 177/274 (64.60%), Postives = 209/274 (76.28%), Query Frame = 1 

Query: 1   MAERIFDRCR--CGSYMGMRLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKC 60
           MAE+IF  CR   GSY+GM LRI D P  R +PQ+QIRT  NSPT  KQIDLNF+V++KC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITD-PDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  QHFQIREEETSNT--TTLIDEHIVSQHPFATFRLPISIFGHGDKTLKLLLFREFHMYRDI 120
           QH+    E  ++T  T L+ EHI S HP  T +LP+SIF HGDKTLK LLFREF +YR I
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 INIEHLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIFRVMDY--- 180
           INIE +VDEIIK+WV KV     D+ENSTS +VF++IY LEIT+ELL++Q+   +D    
Sbjct: 121 INIELVVDEIIKHWVKKV-----DEENSTS-QVFEEIYPLEITIELLVYQMIHAIDQPHE 180

Query: 181 ----QPQVLMMVPTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVV 240
               QPQV MMVPTS+SAMESMLK+VENEEI+K GD+ SI+CVICLEEI KE+KGSE VV
Sbjct: 181 IMMDQPQV-MMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVV 240

Query: 241 LQMPCLHVFHGECINKWLNTSHYCPTCRFPMPIN 264
           LQMPCLH+FH ECI KWL  SHYCPTCRF MP N
Sbjct: 241 LQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTN 266

[Close]
BLAST of CSPI07G06380 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 6.2e-84
Identity = 169/265 (63.77%), Postives = 205/265 (77.36%), Query Frame = 1 

Query: 1   MAERIFDRCR-CGSYMGMRLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQ 60
           MAE+  D C   G YMGM LRI D  ++ R+PQ+QI+T+ NSP   KQIDLNF++Q+KCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFQIREEETSNTTTLIDEHIVSQHPFATFRLPISIFGHGDKTLKLLLFREFHMYRDIINI 120
           HF   EE ++  TTL+ EHI+SQ  F   +LPISIF  GDKTLK LLF++F M+R I+N+
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 EHLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIFRVMDYQPQVLM 180
           E +VDEIIK+W+ KVEE   DQEN+  SRVF +IY LEI +ELL+ ++   +  QPQ +M
Sbjct: 121 ELVVDEIIKHWIRKVEE---DQENN--SRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVM 180

Query: 181 MVPTSDSAMESMLKRVE-NEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPCLHVF 240
           MVPTSD+AMESMLKRVE NEE+MKLG DDSI CVICLE+IGKEEK S  VVLQMPCLH+F
Sbjct: 181 MVPTSDNAMESMLKRVENNEELMKLG-DDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMF 240

Query: 241 HGECINKWLNTSHYCPTCRFPMPIN 264
           H ECI KWL TSH+CPTCRF MPIN
Sbjct: 241 HEECIRKWLKTSHFCPTCRFSMPIN 259

[Close]
BLAST of CSPI07G06380 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 1.1e-83
Identity = 167/269 (62.08%), Postives = 201/269 (74.72%), Query Frame = 1 

Query: 1   MAERIFDRCRCGSYMGMRLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60
           MAE+ FD C  G YMGM LRI D           I+TR NSPT  KQIDLNF+V++KCQH
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISIFGHGDKTLKLLLFREFHMYRDIINIE 120
           FQ  EE+T+  TT + EHI++  PF   +LP+SIF HGDKTLK LLF++F M+R IINIE
Sbjct: 61  FQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120

Query: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIFRVMDY------Q 180
            + D+IIK+WV KVE+++E+     +S VF++IY LEIT+E+L+ Q+   +D       Q
Sbjct: 121 LVTDQIIKHWVKKVEDDKEN-----NSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQ 180

Query: 181 PQVLMMVPTSDSAMESMLKRVENEEIMKLGDDDSIHCVICLEEIGKEEKGSEGVVLQMPC 240
           PQV  MVPTSDSAM+SMLKRVENEEIMK+GD  SI CVICLE+I KEEKGSEGVVLQMPC
Sbjct: 181 PQV-RMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPC 240

Query: 241 LHVFHGECINKWLNTSHYCPTCRFPMPIN 264
           LH+FH ECI KWL TSHYCPTCRF M IN
Sbjct: 241 LHMFHEECIRKWLKTSHYCPTCRFSMTIN 253

The following BLAST results are available for this feature:
BLAST of CSPI07G06380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RDUF1_ARATH5.0e-0942.50E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1[more]
SIS3_ARATH1.6e-0737.80E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2[more]
SDIR1_ARATH2.1e-0731.87E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1[more]
RN181_RAT8.0e-0733.75E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1[more]
RN181_MOUSE1.8e-0641.51E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1[more]
BLAST of CSPI07G06380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2A5_CUCSA1.4e-14698.10Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1[more]
E5GCQ3_CUCME9.3e-8766.67Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K7L0_CUCSA4.6e-8664.60Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1[more]
E5GCQ4_CUCME4.3e-8463.77Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K2A1_CUCSA7.4e-8462.08Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
BLAST of CSPI07G06380 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26800.12.2e-1052.83 RING/U-box superfamily protein[more]
AT3G46620.12.8e-1042.50 zinc finger (C3HC4-type RING finger) family protein[more]
AT1G14200.11.1e-0937.04 RING/U-box superfamily protein[more]
AT1G74620.11.4e-0945.10 RING/U-box superfamily protein[more]
AT1G18770.11.4e-0933.75 RING/U-box superfamily protein[more]
BLAST of CSPI07G06380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188572|gb|KGN43805.1|2.0e-14698.10hypothetical protein Csa_7G068580 [Cucumis sativus][more]
gi|659111003|ref|XP_008455525.1|1.3e-8666.67PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo][more]
gi|700188568|gb|KGN43801.1|6.7e-8664.60hypothetical protein Csa_7G067560 [Cucumis sativus][more]
gi|659111005|ref|XP_008455526.1|6.2e-8463.77PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo][more]
gi|700188567|gb|KGN43800.1|1.1e-8362.08hypothetical protein Csa_7G067550 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06380.1CSPI07G06380.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 210..257
score: 9.0
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 211..256
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 211..257
score: 12
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 210..257
score: 4.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 206..258
score: 9.3
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 139..263
score: 1.3
NoneNo IPR availablePANTHERPTHR22763:SF78E3 UBIQUITIN-PROTEIN LIGASE RHA2Acoord: 139..263
score: 1.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 197..261
score: 2.42

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G06380Cucumber (Chinese Long) v3cpicucB415
CSPI07G06380Watermelon (97103) v2cpiwmbB542
CSPI07G06380Watermelon (97103) v2cpiwmbB554
CSPI07G06380Watermelon (97103) v2cpiwmbB584
CSPI07G06380Wax gourdcpiwgoB685
CSPI07G06380Wax gourdcpiwgoB659
CSPI07G06380Wax gourdcpiwgoB672
CSPI07G06380Cucumber (Gy14) v1cgycpiB336
CSPI07G06380Cucurbita maxima (Rimu)cmacpiB143
CSPI07G06380Cucurbita maxima (Rimu)cmacpiB156
CSPI07G06380Cucurbita maxima (Rimu)cmacpiB534
CSPI07G06380Cucurbita maxima (Rimu)cmacpiB541
CSPI07G06380Cucurbita moschata (Rifu)cmocpiB134
CSPI07G06380Cucurbita moschata (Rifu)cmocpiB136
CSPI07G06380Cucurbita moschata (Rifu)cmocpiB525
CSPI07G06380Cucurbita moschata (Rifu)cmocpiB531
CSPI07G06380Cucurbita moschata (Rifu)cmocpiB777
CSPI07G06380Cucumber (Chinese Long) v2cpicuB354
CSPI07G06380Melon (DHL92) v3.5.1cpimeB538
CSPI07G06380Melon (DHL92) v3.5.1cpimeB557
CSPI07G06380Watermelon (Charleston Gray)cpiwcgB541
CSPI07G06380Watermelon (Charleston Gray)cpiwcgB561
CSPI07G06380Watermelon (Charleston Gray)cpiwcgB576
CSPI07G06380Watermelon (Charleston Gray)cpiwcgB599
CSPI07G06380Watermelon (97103) v1cpiwmB574
CSPI07G06380Watermelon (97103) v1cpiwmB594
CSPI07G06380Watermelon (97103) v1cpiwmB596
CSPI07G06380Cucurbita pepo (Zucchini)cpecpiB258
CSPI07G06380Cucurbita pepo (Zucchini)cpecpiB264
CSPI07G06380Cucurbita pepo (Zucchini)cpecpiB472
CSPI07G06380Cucurbita pepo (Zucchini)cpecpiB696
CSPI07G06380Cucurbita pepo (Zucchini)cpecpiB697
CSPI07G06380Bottle gourd (USVL1VR-Ls)cpilsiB532
CSPI07G06380Bottle gourd (USVL1VR-Ls)cpilsiB534
CSPI07G06380Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G06380Melon (DHL92) v3.6.1cpimedB558
CSPI07G06380Melon (DHL92) v3.6.1cpimedB523
CSPI07G06380Cucumber (Gy14) v2cgybcpiB332
CSPI07G06380Silver-seed gourdcarcpiB0214
CSPI07G06380Silver-seed gourdcarcpiB0322
CSPI07G06380Silver-seed gourdcarcpiB0414
CSPI07G06380Silver-seed gourdcarcpiB0493
CSPI07G06380Silver-seed gourdcarcpiB0766
CSPI07G06380Silver-seed gourdcarcpiB0767