CSPI07G06350 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G06350
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionZinc finger-like protein
LocationChr7 : 4681846 .. 4682649 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAACAAATCTTTGGTCCTTGCAGGTATGGTTCTGGATCCTATATAGGTATGTCACTAAGAATTACTGATCCTGACCTAAGGCATCAACCACAAAGCCAAATTCGAACGCCACCCAACTCGCCAACACTTGTCAAACAAATCGATCTGAATTTCAAAGTTGAAGTCAAATGCCAACACTACTTTCAAGCAGGTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGTGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCATCTTGTAGATTTTCAATGCCTACAAACAATTGA

mRNA sequence

ATGGCCGAACAAATCTTTGGTCCTTGCAGGTATGGTTCTGGATCCTATATAGGTATGTCACTAAGAATTACTGATCCTGACCTAAGGCATCAACCACAAAGCCAAATTCGAACGCCACCCAACTCGCCAACACTTGTCAAACAAATCGATCTGAATTTCAAAGTTGAAGTCAAATGCCAACACTACTTTCAAGCAGGTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGTGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCATCTTGTAGATTTTCAATGCCTACAAACAATTGA

Coding sequence (CDS)

ATGGCCGAACAAATCTTTGGTCCTTGCAGGTATGGTTCTGGATCCTATATAGGTATGTCACTAAGAATTACTGATCCTGACCTAAGGCATCAACCACAAAGCCAAATTCGAACGCCACCCAACTCGCCAACACTTGTCAAACAAATCGATCTGAATTTCAAAGTTGAAGTCAAATGCCAACACTACTTTCAAGCAGGTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGTGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCATCTTGTAGATTTTCAATGCCTACAAACAATTGA
Homology
[Close]
BLAST of CSPI07G06350 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 1 

Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 244
           P S+SA+ES+ +     EI         NC +C E        +E    +MPC H+FH++
Sbjct: 174 PASKSAIESLPRV----EISDCHIGSEANCAVCTEIFE-----TETEAREMPCKHLFHDD 233

Query: 245 CIRKWLKRSHYCPSCRFSMPT 266
           CI  WL   + CP CRF +P+
Sbjct: 234 CIVPWLSIRNSCPVCRFELPS 245

[Close]
BLAST of CSPI07G06350 vs. Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.3e-07
Identity = 27/93 (29.03%), Postives = 49/93 (52.69%), Query Frame = 1 

Query: 175 MMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQ 234
           ++D    +  P +++ +ES+ + V             + C +CL E  +E+      V++
Sbjct: 55  LVDWEHHLPPPAAKAVVESLPRTVIRSS------KAELKCPVCLLEFEEEE-----TVIE 114

Query: 235 MPCLHMFHEECIRKWLKRSHYCPSCRFSMPTNN 268
           MPC H+FH  CI  WL +++ CP CR  +PT++
Sbjct: 115 MPCHHLFHSNCILPWLSKTNSCPLCRHELPTDD 136

[Close]
BLAST of CSPI07G06350 vs. Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.3e-07
Identity = 28/86 (32.56%), Postives = 48/86 (55.81%), Query Frame = 1 

Query: 182 MMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMF 241
           M +   E++  ++L+ +   EIVK  +   + C +C E   + +K        +PC H F
Sbjct: 39  MEIEVPEASKRAILE-LPVHEIVKSDEGGDLECSVCKEPAEEGQK-----YRILPCKHEF 98

Query: 242 HEECIRKWLKRSHYCPSCRFSMPTNN 268
           HEECI  WLK+++ CP CR+ + T++
Sbjct: 99  HEECILLWLKKTNSCPLCRYELETDD 118

[Close]
BLAST of CSPI07G06350 vs. Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 27/93 (29.03%), Postives = 49/93 (52.69%), Query Frame = 1 

Query: 175 MMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQ 234
           ++D    +  P +++ +ES+ + V +           + C +CL E   E+      V++
Sbjct: 55  LVDWEHHLPPPAAKAVVESLPRTVISSA------KADLKCPVCLLEFEAEE-----TVIE 114

Query: 235 MPCLHMFHEECIRKWLKRSHYCPSCRFSMPTNN 268
           MPC H+FH  CI  WL +++ CP CR  +PT++
Sbjct: 115 MPCHHLFHSNCILPWLSKTNSCPLCRHELPTDD 136

[Close]
BLAST of CSPI07G06350 vs. Swiss-Prot
Match: HRD1_CAEBR (E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06
Identity = 31/99 (31.31%), Postives = 50/99 (50.51%), Query Frame = 1 

Query: 162 YQMIHAIDQPHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEI 221
           YQ + A+   H+  +D   V++   + +AM S    V N+E+          C+IC EE+
Sbjct: 250 YQSVRAL---HKAFLD---VILSRRAINAMNSQFPVVSNDELSAM----DATCIICREEM 309

Query: 222 SKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPSCR 261
           + E         ++PC H+FH  C+R W +R   CP+CR
Sbjct: 310 TVESSPK-----RLPCSHVFHAHCLRSWFQRQQTCPTCR 333

[Close]
BLAST of CSPI07G06350 vs. TrEMBL
Match: A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 4.2e-151
Identity = 266/267 (99.63%), Postives = 267/267 (100.00%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180
           NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ
Sbjct: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180

Query: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240
           VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM
Sbjct: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240

Query: 241 FHEECIRKWLKRSHYCPSCRFSMPTNN 268
           FHEECIRKWLKRSHYCP+CRFSMPTNN
Sbjct: 241 FHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of CSPI07G06350 vs. TrEMBL
Match: A0A0A0K493_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067540 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.1e-102
Identity = 195/268 (72.76%), Postives = 223/268 (83.21%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE  F  C   +G ++GMSLRITDPDL  QPQSQ +TP NSPT VKQI+L  KVEVKCQ
Sbjct: 1   MAEHNFDDCM-STGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQA E G+ TFA+ L+ EHI SHHP PT QLPVS+F+HG++TLKRLLF++FQI+R II
Sbjct: 61  H-FQADEEGD-TFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NI+LV DEII+HWVKK  D EN++  + EEIYPLEITIELL+ +MIHAIDQP E + DQP
Sbjct: 121 NIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVP SESAMESMLK+VE EEIVK G++KSINCVICLEEISK+ KGSE VVLQMPCLH
Sbjct: 181 QVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPSCRFSMPTNN 268
           MFHEECIR WLK SHYCP+CRFSMP NN
Sbjct: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]
BLAST of CSPI07G06350 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 6.8e-101
Identity = 199/268 (74.25%), Postives = 223/268 (83.21%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQ F  C   SG Y+GMSLRITDP         I+T  NSPT VKQIDLNFKVEVKCQ
Sbjct: 1   MAEQNFDDCT--SGYYMGMSLRITDP---------IQTRSNSPTSVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQAGE  ++TFAT  LSEHI +H P P LQLPVSIFKHGDKTLKRLLF++FQ++RAII
Sbjct: 61  H-FQAGEE-DTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NIELV D+IIKHWVKKV D++ + S VFEEIYPLEITIE+LV QMI A+DQP E + DQP
Sbjct: 121 NIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVPTS+SAM+SMLK+VENEEI+K GD KSI+CVICLE+ISKE+KGSE VVLQMPCLH
Sbjct: 181 QVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPSCRFSMPTNN 268
           MFHEECIRKWLK SHYCP+CRFSM  NN
Sbjct: 241 MFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]
BLAST of CSPI07G06350 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 7.8e-97
Identity = 186/271 (68.63%), Postives = 224/271 (82.66%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE+IF  CRYGSGSY+GMSLRITDP+ RHQP +QI    +SPTLV+QI L FKV++KCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQ  EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  II
Sbjct: 61  H-FQVWEGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120

Query: 121 NIELVVDEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMM 180
           NIEL+ +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+
Sbjct: 121 NIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMI 180

Query: 181 DQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           DQP  +MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMP
Sbjct: 181 DQP--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPSCRFSMPTNN 268
           CLHMFHEECIRKWLK SHYCP+CRFSMP +N
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]
BLAST of CSPI07G06350 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.2e-94
Identity = 192/271 (70.85%), Postives = 223/271 (82.29%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRH-QPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60
           MAEQ    C   +G Y+GMSLRITDPDLRH QPQSQI+T PNSP LVKQIDLNFK++VKC
Sbjct: 1   MAEQNLDACM-SAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60

Query: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120
           QH F AGE G STFAT LLSEHI S    P LQLP+SIFK GDKTLKRLLF++FQ++R I
Sbjct: 61  QH-FGAGEEG-STFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGI 120

Query: 121 INIELVVDEIIKHWVKKVDEEN-STSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQ 180
           +N+ELVVDEIIKHW++KV+E+  + S+VF EIYPLEI IELLV +MI AI       +DQ
Sbjct: 121 VNVELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAI-------IDQ 180

Query: 181 PQ-VMMVPTSESAMESMLKKVE-NEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           PQ VMMVPTS++AMESMLK+VE NEE++K GD+ SI+CVICLE+I KE+K S  VVLQMP
Sbjct: 181 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPSCRFSMPTNN 268
           CLHMFHEECIRKWLK SH+CP+CRFSMP NN
Sbjct: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 260

[Close]
BLAST of CSPI07G06350 vs. TAIR10
Match: AT1G14200.1 (AT1G14200.1 RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 41/127 (32.28%), Postives = 60/127 (47.24%), Query Frame = 1 

Query: 138 DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESAMESMLKK 197
           D++ ST Q      PL        + MI +     +   D  +    P  +S +E+M + 
Sbjct: 42  DDQGSTDQTTRRGDPLSPR-----FVMIGSRSGLDDFFSDGGKQGRSPALKSEVENMPRV 101

Query: 198 VENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCP 257
           V  E+  K+G +    C ICL+E SK       V  +MPC H FH +C+ +WL R   CP
Sbjct: 102 VIGEDKEKYGGS----CAICLDEWSKGD-----VAAEMPCKHKFHSKCVEEWLGRHATCP 154

Query: 258 SCRFSMP 265
            CR+ MP
Sbjct: 162 MCRYEMP 154

[Close]
BLAST of CSPI07G06350 vs. TAIR10
Match: AT1G18770.1 (AT1G18770.1 RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 28/80 (35.00%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 244
           P S+  ++S+ +K+        G+     C+ICLEE S+ ++     V+ +PC H F +E
Sbjct: 34  PASKLVVKSLARKIYKMTTSSTGEM----CIICLEEFSEGRR-----VVTLPCGHDFDDE 93

Query: 245 CIRKWLKRSHYCPSCRFSMP 265
           C+ KW + +H CP CRF +P
Sbjct: 94  CVLKWFETNHSCPLCRFKLP 104

[Close]
BLAST of CSPI07G06350 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08
Identity = 27/53 (50.94%), Postives = 30/53 (56.60%), Query Frame = 1 

Query: 214 CVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPSCRFSMPTN 267
           CVICLEE       SE  V +MPC H FH  CI KWL     CP CR+ MP +
Sbjct: 113 CVICLEEWK-----SEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]
BLAST of CSPI07G06350 vs. TAIR10
Match: AT5G59550.1 (AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 1 

Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 244
           P S+SA+ES+ +     EI         NC +C E        +E    +MPC H+FH++
Sbjct: 174 PASKSAIESLPRV----EISDCHIGSEANCAVCTEIFE-----TETEAREMPCKHLFHDD 233

Query: 245 CIRKWLKRSHYCPSCRFSMPT 266
           CI  WL   + CP CRF +P+
Sbjct: 234 CIVPWLSIRNSCPVCRFELPS 245

[Close]
BLAST of CSPI07G06350 vs. TAIR10
Match: AT5G37250.1 (AT5G37250.1 RING/U-box superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-08
Identity = 28/93 (30.11%), Postives = 45/93 (48.39%), Query Frame = 1 

Query: 168 IDQPHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKG 227
           ++   ++M     V    T +  +E      +  E+   GD +   C ICLE+ S+    
Sbjct: 96  VEVTRDVMFSSIAVRSTDTFQRLLEE-----QTMELTDLGDEEETTCSICLEDFSESH-- 155

Query: 228 SEAVVLQMPCLHMFHEECIRKWLKRSHYCPSCR 261
            + ++L   C H+FH+ CI +WLKR   CP CR
Sbjct: 156 DDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCR 181

[Close]
BLAST of CSPI07G06350 vs. NCBI nr
Match: gi|700188568|gb|KGN43801.1| (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 542.0 bits (1395), Expect = 6.0e-151
Identity = 266/267 (99.63%), Postives = 267/267 (100.00%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180
           NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ
Sbjct: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180

Query: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240
           VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM
Sbjct: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240

Query: 241 FHEECIRKWLKRSHYCPSCRFSMPTNN 268
           FHEECIRKWLKRSHYCP+CRFSMPTNN
Sbjct: 241 FHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of CSPI07G06350 vs. NCBI nr
Match: gi|778730182|ref|XP_011659721.1| (PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 3.0e-102
Identity = 195/268 (72.76%), Postives = 223/268 (83.21%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE  F  C   +G ++GMSLRITDPDL  QPQSQ +TP NSPT VKQI+L  KVEVKCQ
Sbjct: 1   MAEHNFDDCM-STGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQA E G+ TFA+ L+ EHI SHHP PT QLPVS+F+HG++TLKRLLF++FQI+R II
Sbjct: 61  H-FQADEEGD-TFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NI+LV DEII+HWVKK  D EN++  + EEIYPLEITIELL+ +MIHAIDQP E + DQP
Sbjct: 121 NIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVP SESAMESMLK+VE EEIVK G++KSINCVICLEEISK+ KGSE VVLQMPCLH
Sbjct: 181 QVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPSCRFSMPTNN 268
           MFHEECIR WLK SHYCP+CRFSMP NN
Sbjct: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]
BLAST of CSPI07G06350 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 9.7e-101
Identity = 199/268 (74.25%), Postives = 223/268 (83.21%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQ F  C   SG Y+GMSLRITDP         I+T  NSPT VKQIDLNFKVEVKCQ
Sbjct: 1   MAEQNFDDCT--SGYYMGMSLRITDP---------IQTRSNSPTSVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQAGE  ++TFAT  LSEHI +H P P LQLPVSIFKHGDKTLKRLLF++FQ++RAII
Sbjct: 61  H-FQAGEE-DTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NIELV D+IIKHWVKKV D++ + S VFEEIYPLEITIE+LV QMI A+DQP E + DQP
Sbjct: 121 NIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVPTS+SAM+SMLK+VENEEI+K GD KSI+CVICLE+ISKE+KGSE VVLQMPCLH
Sbjct: 181 QVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPSCRFSMPTNN 268
           MFHEECIRKWLK SHYCP+CRFSM  NN
Sbjct: 241 MFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]
BLAST of CSPI07G06350 vs. NCBI nr
Match: gi|659111003|ref|XP_008455525.1| (PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo])

HSP 1 Score: 361.7 bits (927), Expect = 1.1e-96
Identity = 186/271 (68.63%), Postives = 224/271 (82.66%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE+IF  CRYGSGSY+GMSLRITDP+ RHQP +QI    +SPTLV+QI L FKV++KCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQ  EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  II
Sbjct: 61  H-FQVWEGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120

Query: 121 NIELVVDEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMM 180
           NIEL+ +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+
Sbjct: 121 NIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMI 180

Query: 181 DQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           DQP  +MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMP
Sbjct: 181 DQP--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPSCRFSMPTNN 268
           CLHMFHEECIRKWLK SHYCP+CRFSMP +N
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]
BLAST of CSPI07G06350 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 1.8e-94
Identity = 192/271 (70.85%), Postives = 223/271 (82.29%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRH-QPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60
           MAEQ    C   +G Y+GMSLRITDPDLRH QPQSQI+T PNSP LVKQIDLNFK++VKC
Sbjct: 1   MAEQNLDACM-SAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60

Query: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120
           QH F AGE G STFAT LLSEHI S    P LQLP+SIFK GDKTLKRLLF++FQ++R I
Sbjct: 61  QH-FGAGEEG-STFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGI 120

Query: 121 INIELVVDEIIKHWVKKVDEEN-STSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQ 180
           +N+ELVVDEIIKHW++KV+E+  + S+VF EIYPLEI IELLV +MI AI       +DQ
Sbjct: 121 VNVELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAI-------IDQ 180

Query: 181 PQ-VMMVPTSESAMESMLKKVE-NEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           PQ VMMVPTS++AMESMLK+VE NEE++K GD+ SI+CVICLE+I KE+K S  VVLQMP
Sbjct: 181 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPSCRFSMPTNN 268
           CLHMFHEECIRKWLK SH+CP+CRFSMP NN
Sbjct: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 260

The following BLAST results are available for this feature:
BLAST of CSPI07G06350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RDUF2_ARATH2.8e-0735.80E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1[more]
RN181_RAT6.3e-0729.03E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1[more]
RN181_DROME6.3e-0732.56E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 ... [more]
RN181_MOUSE1.1e-0629.03E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1[more]
HRD1_CAEBR1.4e-0631.31E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2[more]
BLAST of CSPI07G06350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7L0_CUCSA4.2e-15199.63Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1[more]
A0A0A0K493_CUCSA2.1e-10272.76Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067540 PE=4 SV=1[more]
A0A0A0K2A1_CUCSA6.8e-10174.25Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
E5GCQ3_CUCME7.8e-9768.63Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GCQ4_CUCME1.2e-9470.85Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of CSPI07G06350 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14200.11.4e-0932.28 RING/U-box superfamily protein[more]
AT1G18770.11.4e-0935.00 RING/U-box superfamily protein[more]
AT1G26800.11.6e-0850.94 RING/U-box superfamily protein[more]
AT5G59550.11.6e-0835.80 zinc finger (C3HC4-type RING finger) family protein[more]
AT5G37250.12.1e-0830.11 RING/U-box superfamily protein[more]
BLAST of CSPI07G06350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188568|gb|KGN43801.1|6.0e-15199.63hypothetical protein Csa_7G067560 [Cucumis sativus][more]
gi|778730182|ref|XP_011659721.1|3.0e-10272.76PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus][more]
gi|700188567|gb|KGN43800.1|9.7e-10174.25hypothetical protein Csa_7G067550 [Cucumis sativus][more]
gi|659111003|ref|XP_008455525.1|1.1e-9668.63PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo][more]
gi|659111005|ref|XP_008455526.1|1.8e-9470.85PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06350.1CSPI07G06350.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 213..260
score: 1.5
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 214..259
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 214..260
score: 12
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 213..260
score: 0.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 210..261
score: 3.1
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 147..267
score: 2.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 197..264
score: 4.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G06350Cucumber (Gy14) v1cgycpiB336
CSPI07G06350Cucurbita maxima (Rimu)cmacpiB143
CSPI07G06350Cucurbita maxima (Rimu)cmacpiB156
CSPI07G06350Cucurbita maxima (Rimu)cmacpiB534
CSPI07G06350Cucurbita maxima (Rimu)cmacpiB541
CSPI07G06350Cucurbita moschata (Rifu)cmocpiB134
CSPI07G06350Cucurbita moschata (Rifu)cmocpiB136
CSPI07G06350Cucurbita moschata (Rifu)cmocpiB525
CSPI07G06350Cucurbita moschata (Rifu)cmocpiB531
CSPI07G06350Cucurbita moschata (Rifu)cmocpiB777
CSPI07G06350Cucumber (Chinese Long) v2cpicuB354
CSPI07G06350Melon (DHL92) v3.5.1cpimeB538
CSPI07G06350Melon (DHL92) v3.5.1cpimeB557
CSPI07G06350Watermelon (Charleston Gray)cpiwcgB541
CSPI07G06350Watermelon (Charleston Gray)cpiwcgB561
CSPI07G06350Watermelon (Charleston Gray)cpiwcgB576
CSPI07G06350Watermelon (Charleston Gray)cpiwcgB599
CSPI07G06350Watermelon (97103) v1cpiwmB574
CSPI07G06350Watermelon (97103) v1cpiwmB594
CSPI07G06350Watermelon (97103) v1cpiwmB596
CSPI07G06350Cucurbita pepo (Zucchini)cpecpiB258
CSPI07G06350Cucurbita pepo (Zucchini)cpecpiB264
CSPI07G06350Cucurbita pepo (Zucchini)cpecpiB472
CSPI07G06350Cucurbita pepo (Zucchini)cpecpiB696
CSPI07G06350Cucurbita pepo (Zucchini)cpecpiB697
CSPI07G06350Bottle gourd (USVL1VR-Ls)cpilsiB532
CSPI07G06350Bottle gourd (USVL1VR-Ls)cpilsiB534
CSPI07G06350Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G06350Melon (DHL92) v3.6.1cpimedB558
CSPI07G06350Melon (DHL92) v3.6.1cpimedB523
CSPI07G06350Cucumber (Gy14) v2cgybcpiB332
CSPI07G06350Silver-seed gourdcarcpiB0214
CSPI07G06350Silver-seed gourdcarcpiB0322
CSPI07G06350Silver-seed gourdcarcpiB0414
CSPI07G06350Silver-seed gourdcarcpiB0493
CSPI07G06350Silver-seed gourdcarcpiB0766
CSPI07G06350Silver-seed gourdcarcpiB0767
CSPI07G06350Cucumber (Chinese Long) v3cpicucB415
CSPI07G06350Watermelon (97103) v2cpiwmbB542
CSPI07G06350Watermelon (97103) v2cpiwmbB554
CSPI07G06350Watermelon (97103) v2cpiwmbB584
CSPI07G06350Wax gourdcpiwgoB685
CSPI07G06350Wax gourdcpiwgoB659
CSPI07G06350Wax gourdcpiwgoB672