CSPI07G06340 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G06340
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionE3 ubiquitin-protein ligase RING1
LocationChr7 : 4679918 .. 4680685 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAACAAAACTTTGATGATTGTACGTCTGGTTACTACATGGGTATGTCACTAAGAATTACCGATCCCATTCAAACTCGATCAAACTCGCCAACATCTGTCAAACAAATCGACCTGAATTTCAAAGTTGAAGTCAAATGCCAACACTTTCAAGCCGGTGAAGAAGACAGCACATTTGCAACAACTTTTCTTAGTGAGCACATAATTGCACACCAGCCCTTTCCAGCTTTGCAACTTCCTGTCTCCATCTTCAAACATGGTGACAAAACTTTGAAGCGATTACTTTTTCAGAAGTTTCAGATGTTTAGAGCCATCATCAACATTGAACTTGTGACTGACCAAATAATAAAACATTGGGTTAAAAAAGTAGAAGATGATAAAGAGAATAATTCTGGGGTGTTTGAAGAGATTTATCCTCTTGAAATTACGATAGAGGTGTTGGTTCTTCAAATGATTGATGCAGTAGACCAACCACAAGAAACGATAGATCAACCACAAGTAAGGATGGTTCCAACAAGCGACAGTGCTATGAAGAGTATGCTGAAGAGAGTGGAAAACGAAGAAATAATGAAAGTAGGTGACTACAAAAGCATTAGTTGTGTTATTTGCTTGGAGAAAATTAGTAAAGAGGAGAAAGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTATAAACAACAATTGA

mRNA sequence

ATGGCCGAACAAAACTTTGATGATTGTACGTCTGGTTACTACATGGGTATGTCACTAAGAATTACCGATCCCATTCAAACTCGATCAAACTCGCCAACATCTGTCAAACAAATCGACCTGAATTTCAAAGTTGAAGTCAAATGCCAACACTTTCAAGCCGGTGAAGAAGACAGCACATTTGCAACAACTTTTCTTAGTGAGCACATAATTGCACACCAGCCCTTTCCAGCTTTGCAACTTCCTGTCTCCATCTTCAAACATGGTGACAAAACTTTGAAGCGATTACTTTTTCAGAAGTTTCAGATGTTTAGAGCCATCATCAACATTGAACTTGTGACTGACCAAATAATAAAACATTGGGTTAAAAAAGTAGAAGATGATAAAGAGAATAATTCTGGGGTGTTTGAAGAGATTTATCCTCTTGAAATTACGATAGAGGTGTTGGTTCTTCAAATGATTGATGCAGTAGACCAACCACAAGAAACGATAGATCAACCACAAGTAAGGATGGTTCCAACAAGCGACAGTGCTATGAAGAGTATGCTGAAGAGAGTGGAAAACGAAGAAATAATGAAAGTAGGTGACTACAAAAGCATTAGTTGTGTTATTTGCTTGGAGAAAATTAGTAAAGAGGAGAAAGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTATAAACAACAATTGA

Coding sequence (CDS)

ATGGCCGAACAAAACTTTGATGATTGTACGTCTGGTTACTACATGGGTATGTCACTAAGAATTACCGATCCCATTCAAACTCGATCAAACTCGCCAACATCTGTCAAACAAATCGACCTGAATTTCAAAGTTGAAGTCAAATGCCAACACTTTCAAGCCGGTGAAGAAGACAGCACATTTGCAACAACTTTTCTTAGTGAGCACATAATTGCACACCAGCCCTTTCCAGCTTTGCAACTTCCTGTCTCCATCTTCAAACATGGTGACAAAACTTTGAAGCGATTACTTTTTCAGAAGTTTCAGATGTTTAGAGCCATCATCAACATTGAACTTGTGACTGACCAAATAATAAAACATTGGGTTAAAAAAGTAGAAGATGATAAAGAGAATAATTCTGGGGTGTTTGAAGAGATTTATCCTCTTGAAATTACGATAGAGGTGTTGGTTCTTCAAATGATTGATGCAGTAGACCAACCACAAGAAACGATAGATCAACCACAAGTAAGGATGGTTCCAACAAGCGACAGTGCTATGAAGAGTATGCTGAAGAGAGTGGAAAACGAAGAAATAATGAAAGTAGGTGACTACAAAAGCATTAGTTGTGTTATTTGCTTGGAGAAAATTAGTAAAGAGGAGAAAGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTATAAACAACAATTGA
Homology
[Close]
BLAST of CSPI07G06340 vs. Swiss-Prot
Match: SDIR1_ARATH (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 25/73 (34.25%), Postives = 38/73 (52.05%), Query Frame = 1 

Query: 176 SAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRK 235
           S   S  K +++    K G    ++C +CLE+++  E     +V  +PCLH FH  CI  
Sbjct: 186 STSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGE-----IVRTLPCLHQFHAGCIDP 245

Query: 236 WLKTSHYCPTCRF 249
           WL+    CP C+F
Sbjct: 246 WLRQQGTCPVCKF 253

[Close]
BLAST of CSPI07G06340 vs. Swiss-Prot
Match: HRD1_CAEBR (E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-06
Identity = 24/72 (33.33%), Postives = 38/72 (52.78%), Query Frame = 1 

Query: 176 SAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRK 235
           +AM S    V N+E+  +      +C+IC E+++ E         ++PC H+FH  C+R 
Sbjct: 271 NAMNSQFPVVSNDELSAM----DATCIICREEMTVESSPK-----RLPCSHVFHAHCLRS 330

Query: 236 WLKTSHYCPTCR 248
           W +    CPTCR
Sbjct: 331 WFQRQQTCPTCR 333

[Close]
BLAST of CSPI07G06340 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 6.9e-143
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 1 

Query: 1   MAEQNFDDCTSGYYMGMSLRITDPIQTRSNSPTSVKQIDLNFKVEVKCQHFQAGEEDSTF 60
           MAEQNFDDCTSGYYMGMSLRITDPIQTRSNSPTSVKQIDLNFKVEVKCQHFQAGEED+TF
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDPIQTRSNSPTSVKQIDLNFKVEVKCQHFQAGEEDTTF 60

Query: 61  ATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQIIKHW 120
           ATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQIIKHW
Sbjct: 61  ATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQIIKHW 120

Query: 121 VKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKS 180
           VKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKS
Sbjct: 121 VKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKS 180

Query: 181 MLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTS 240
           MLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTS
Sbjct: 181 MLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTS 240

Query: 241 HYCPTCRFSMPINNN 256
           HYCPTCRFSM INNN
Sbjct: 241 HYCPTCRFSMTINNN 255

[Close]
BLAST of CSPI07G06340 vs. TrEMBL
Match: A0A0A0K493_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067540 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 3.6e-107
Identity = 198/266 (74.44%), Postives = 227/266 (85.34%), Query Frame = 1 

Query: 1   MAEQNFDDCTS-GYYMGMSLRITDPI---------QTRSNSPTSVKQIDLNFKVEVKCQH 60
           MAE NFDDC S G +MGMSLRITDP          QT  NSPT VKQI+L  KVEVKCQH
Sbjct: 1   MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH 60

Query: 61  FQAGEEDSTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120
           FQA EE  TFA+T + EHI++H PFP  QLPVS+F+HG++TLKRLLFQ+FQ+FR IINI+
Sbjct: 61  FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ 120

Query: 121 LVTDQIIKHWVKKVEDDKENNSGV-FEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVR 180
           LV D+II+HWVKK E+D+ENNSGV  EEIYPLEITIE+L+L+MI A+DQP+ETIDQPQV 
Sbjct: 121 LVADEIIEHWVKK-EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVT 180

Query: 181 MVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFH 240
           MVP S+SAM+SMLKRVE EEI+KVG+ KSI+CVICLE+ISK+ KGSEGVVLQMPCLHMFH
Sbjct: 181 MVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFH 240

Query: 241 EECIRKWLKTSHYCPTCRFSMPINNN 256
           EECIR WLKTSHYCPTCRFSMPINNN
Sbjct: 241 EECIRTWLKTSHYCPTCRFSMPINNN 265

[Close]
BLAST of CSPI07G06340 vs. TrEMBL
Match: A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.8e-103
Identity = 202/268 (75.37%), Postives = 224/268 (83.58%), Query Frame = 1 

Query: 1   MAEQNFDDCT--SGYYMGMSLRITDP---------IQTRSNSPTSVKQIDLNFKVEVKCQ 60
           MAEQ F  C   SG Y+GMSLRITDP         I+T  NSPT VKQIDLNFKVEVKCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  H-FQAGEE-DSTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAII 120
           H FQAGE  +STFAT  LSEHI +H P P LQLPVSIFKHGDKTLKRLLF++FQ++RAII
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETI-DQP 180
           NIELV D+IIKHWVKKV D++ + S VFEEIYPLEITIE+LV QMI A+DQP E + DQP
Sbjct: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180

Query: 181 QVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLH 240
           QV MVPTS+SAM+SMLK+VENEEI+K GD KSI+CVICLE+ISKE+KGSE VVLQMPCLH
Sbjct: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240

Query: 241 MFHEECIRKWLKTSHYCPTCRFSMPINN 255
           MFHEECIRKWLK SHYCPTCRFSMP NN
Sbjct: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of CSPI07G06340 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 5.3e-103
Identity = 200/267 (74.91%), Postives = 220/267 (82.40%), Query Frame = 1 

Query: 1   MAEQNFDDCTS-GYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQ 60
           MAEQN D C S GYYMGMSLRITDP          IQT+ NSP  VKQIDLNFK++VKCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFQAGEEDSTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINI 120
           HF AGEE STFATT LSEHII+   FPALQLP+SIFK GDKTLKRLLFQKFQMFR I+N+
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 ELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDA-VDQPQETIDQPQV 180
           ELV D+IIKHW++KVE+D+ENNS VF EIYPLEI IE+LV +MI A +DQPQE      V
Sbjct: 121 ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQE------V 180

Query: 181 RMVPTSDSAMKSMLKRVE-NEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHM 240
            MVPTSD+AM+SMLKRVE NEE+MK+GD  SI CVICLEKI KEEK S  VVLQMPCLHM
Sbjct: 181 MMVPTSDNAMESMLKRVENNEELMKLGD-DSIDCVICLEKIGKEEKRSGRVVLQMPCLHM 240

Query: 241 FHEECIRKWLKTSHYCPTCRFSMPINN 255
           FHEECIRKWLKTSH+CPTCRFSMPINN
Sbjct: 241 FHEECIRKWLKTSHFCPTCRFSMPINN 260

[Close]
BLAST of CSPI07G06340 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.0e-86
Identity = 173/267 (64.79%), Postives = 208/267 (77.90%), Query Frame = 1 

Query: 1   MAEQNFDDCT--SGYYMGMSLRITDPIQT--------RSNSPTSVKQIDLNFKVEVKCQH 60
           MAE+ F+ C   SG YMGMSLRITDP           +++SPT V+QI L FKV++KCQH
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQH 60

Query: 61  FQAGEEDSTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120
           FQ  E  +  +TT + EHI +   F   QLP+SIFKHGDKTLKR+LF++F+M+  IINIE
Sbjct: 61  FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIE 120

Query: 121 LVTDQIIKHWVKKV--EDDKENNSGV-FEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQ 180
           L+ ++IIKHWV+KV  E+D+ENNS V F++IYPLEI I +LV +MI AV      IDQP 
Sbjct: 121 LLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQP- 180

Query: 181 VRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHM 240
             MVPTSDSA++SMLKRVENEEIMK GD +SI+CV+CLE+ISKEEKGSE  VLQMPCLHM
Sbjct: 181 -LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHM 240

Query: 241 FHEECIRKWLKTSHYCPTCRFSMPINN 255
           FHEECIRKWLKTSHYCPTCRFSMPI+N
Sbjct: 241 FHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]
BLAST of CSPI07G06340 vs. TAIR10
Match: AT1G18770.1 (AT1G18770.1 RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-10
Identity = 28/80 (35.00%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 172 PTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEE 231
           P S   +KS+ +++        G+     C+ICLE+ S+  +     V+ +PC H F +E
Sbjct: 34  PASKLVVKSLARKIYKMTTSSTGEM----CIICLEEFSEGRR-----VVTLPCGHDFDDE 93

Query: 232 CIRKWLKTSHYCPTCRFSMP 252
           C+ KW +T+H CP CRF +P
Sbjct: 94  CVLKWFETNHSCPLCRFKLP 104

[Close]
BLAST of CSPI07G06340 vs. TAIR10
Match: AT1G14200.1 (AT1G14200.1 RING/U-box superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09
Identity = 30/81 (37.04%), Postives = 44/81 (54.32%), Query Frame = 1 

Query: 172 PTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEE 231
           P   S +++M + V  E+  K G     SC ICL++ SK +     V  +MPC H FH +
Sbjct: 84  PALKSEVENMPRVVIGEDKEKYGG----SCAICLDEWSKGD-----VAAEMPCKHKFHSK 143

Query: 232 CIRKWLKTSHYCPTCRFSMPI 253
           C+ +WL     CP CR+ MP+
Sbjct: 144 CVEEWLGRHATCPMCRYEMPV 155

[Close]
BLAST of CSPI07G06340 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-09
Identity = 26/55 (47.27%), Postives = 32/55 (58.18%), Query Frame = 1 

Query: 201 CVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMPINNN 256
           CVICLE+   EE      V +MPC H FH  CI KWL     CP CR+ MP++ +
Sbjct: 113 CVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVDGD 162

[Close]
BLAST of CSPI07G06340 vs. TAIR10
Match: AT1G74620.1 (AT1G74620.1 RING/U-box superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-08
Identity = 23/61 (37.70%), Postives = 34/61 (55.74%), Query Frame = 1 

Query: 191 MKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSM 250
           + V   +   C IC+E   +       +V ++PC H FH +CI KWL+ +H CP CR S+
Sbjct: 173 LNVATTEENGCAICMEDYIE----GSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSI 229

Query: 251 P 252
           P
Sbjct: 233 P 229

[Close]
BLAST of CSPI07G06340 vs. TAIR10
Match: AT3G15740.1 (AT3G15740.1 RING/U-box superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 4.4e-08
Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 1 

Query: 165 QPQVRMVPTSDSAMKSMLKR--VENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQM 224
           Q Q+ + P +D A++  L+   VENE            CVIC++ I     GS+    +M
Sbjct: 148 QVQLAVAPANDEAVEMHLETLVVENEGY----------CVICMDNI---RVGSDVEAGRM 207

Query: 225 PCLHMFHEECIRKWLKTSHYCPTCRFSMP 252
           PC H+FH  C  +WL+ S  CP CR   P
Sbjct: 208 PCSHVFHRTCGEEWLRNSGICPVCRALFP 223

[Close]
BLAST of CSPI07G06340 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 514.6 bits (1324), Expect = 9.8e-143
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 1 

Query: 1   MAEQNFDDCTSGYYMGMSLRITDPIQTRSNSPTSVKQIDLNFKVEVKCQHFQAGEEDSTF 60
           MAEQNFDDCTSGYYMGMSLRITDPIQTRSNSPTSVKQIDLNFKVEVKCQHFQAGEED+TF
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDPIQTRSNSPTSVKQIDLNFKVEVKCQHFQAGEEDTTF 60

Query: 61  ATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQIIKHW 120
           ATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQIIKHW
Sbjct: 61  ATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQIIKHW 120

Query: 121 VKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKS 180
           VKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKS
Sbjct: 121 VKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKS 180

Query: 181 MLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTS 240
           MLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTS
Sbjct: 181 MLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTS 240

Query: 241 HYCPTCRFSMPINNN 256
           HYCPTCRFSM INNN
Sbjct: 241 HYCPTCRFSMTINNN 255

[Close]
BLAST of CSPI07G06340 vs. NCBI nr
Match: gi|778730182|ref|XP_011659721.1| (PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus])

HSP 1 Score: 396.0 bits (1016), Expect = 5.1e-107
Identity = 198/266 (74.44%), Postives = 227/266 (85.34%), Query Frame = 1 

Query: 1   MAEQNFDDCTS-GYYMGMSLRITDPI---------QTRSNSPTSVKQIDLNFKVEVKCQH 60
           MAE NFDDC S G +MGMSLRITDP          QT  NSPT VKQI+L  KVEVKCQH
Sbjct: 1   MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH 60

Query: 61  FQAGEEDSTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120
           FQA EE  TFA+T + EHI++H PFP  QLPVS+F+HG++TLKRLLFQ+FQ+FR IINI+
Sbjct: 61  FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ 120

Query: 121 LVTDQIIKHWVKKVEDDKENNSGV-FEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVR 180
           LV D+II+HWVKK E+D+ENNSGV  EEIYPLEITIE+L+L+MI A+DQP+ETIDQPQV 
Sbjct: 121 LVADEIIEHWVKK-EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVT 180

Query: 181 MVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFH 240
           MVP S+SAM+SMLKRVE EEI+KVG+ KSI+CVICLE+ISK+ KGSEGVVLQMPCLHMFH
Sbjct: 181 MVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFH 240

Query: 241 EECIRKWLKTSHYCPTCRFSMPINNN 256
           EECIR WLKTSHYCPTCRFSMPINNN
Sbjct: 241 EECIRTWLKTSHYCPTCRFSMPINNN 265

[Close]
BLAST of CSPI07G06340 vs. NCBI nr
Match: gi|700188568|gb|KGN43801.1| (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 2.6e-103
Identity = 202/268 (75.37%), Postives = 224/268 (83.58%), Query Frame = 1 

Query: 1   MAEQNFDDCT--SGYYMGMSLRITDP---------IQTRSNSPTSVKQIDLNFKVEVKCQ 60
           MAEQ F  C   SG Y+GMSLRITDP         I+T  NSPT VKQIDLNFKVEVKCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  H-FQAGEE-DSTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAII 120
           H FQAGE  +STFAT  LSEHI +H P P LQLPVSIFKHGDKTLKRLLF++FQ++RAII
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETI-DQP 180
           NIELV D+IIKHWVKKV D++ + S VFEEIYPLEITIE+LV QMI A+DQP E + DQP
Sbjct: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180

Query: 181 QVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLH 240
           QV MVPTS+SAM+SMLK+VENEEI+K GD KSI+CVICLE+ISKE+KGSE VVLQMPCLH
Sbjct: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240

Query: 241 MFHEECIRKWLKTSHYCPTCRFSMPINN 255
           MFHEECIRKWLK SHYCPTCRFSMP NN
Sbjct: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of CSPI07G06340 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 7.6e-103
Identity = 200/267 (74.91%), Postives = 220/267 (82.40%), Query Frame = 1 

Query: 1   MAEQNFDDCTS-GYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQ 60
           MAEQN D C S GYYMGMSLRITDP          IQT+ NSP  VKQIDLNFK++VKCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFQAGEEDSTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINI 120
           HF AGEE STFATT LSEHII+   FPALQLP+SIFK GDKTLKRLLFQKFQMFR I+N+
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 ELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDA-VDQPQETIDQPQV 180
           ELV D+IIKHW++KVE+D+ENNS VF EIYPLEI IE+LV +MI A +DQPQE      V
Sbjct: 121 ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQE------V 180

Query: 181 RMVPTSDSAMKSMLKRVE-NEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHM 240
            MVPTSD+AM+SMLKRVE NEE+MK+GD  SI CVICLEKI KEEK S  VVLQMPCLHM
Sbjct: 181 MMVPTSDNAMESMLKRVENNEELMKLGD-DSIDCVICLEKIGKEEKRSGRVVLQMPCLHM 240

Query: 241 FHEECIRKWLKTSHYCPTCRFSMPINN 255
           FHEECIRKWLKTSH+CPTCRFSMPINN
Sbjct: 241 FHEECIRKWLKTSHFCPTCRFSMPINN 260

[Close]
BLAST of CSPI07G06340 vs. NCBI nr
Match: gi|659111003|ref|XP_008455525.1| (PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo])

HSP 1 Score: 327.0 bits (837), Expect = 2.9e-86
Identity = 173/267 (64.79%), Postives = 208/267 (77.90%), Query Frame = 1 

Query: 1   MAEQNFDDCT--SGYYMGMSLRITDPIQT--------RSNSPTSVKQIDLNFKVEVKCQH 60
           MAE+ F+ C   SG YMGMSLRITDP           +++SPT V+QI L FKV++KCQH
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQH 60

Query: 61  FQAGEEDSTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120
           FQ  E  +  +TT + EHI +   F   QLP+SIFKHGDKTLKR+LF++F+M+  IINIE
Sbjct: 61  FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIE 120

Query: 121 LVTDQIIKHWVKKV--EDDKENNSGV-FEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQ 180
           L+ ++IIKHWV+KV  E+D+ENNS V F++IYPLEI I +LV +MI AV      IDQP 
Sbjct: 121 LLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQP- 180

Query: 181 VRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHM 240
             MVPTSDSA++SMLKRVENEEIMK GD +SI+CV+CLE+ISKEEKGSE  VLQMPCLHM
Sbjct: 181 -LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHM 240

Query: 241 FHEECIRKWLKTSHYCPTCRFSMPINN 255
           FHEECIRKWLKTSHYCPTCRFSMPI+N
Sbjct: 241 FHEECIRKWLKTSHYCPTCRFSMPIDN 265

The following BLAST results are available for this feature:
BLAST of CSPI07G06340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDIR1_ARATH1.3e-0634.25E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1[more]
HRD1_CAEBR3.0e-0633.33E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2[more]
BLAST of CSPI07G06340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2A1_CUCSA6.9e-14399.22Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
A0A0A0K493_CUCSA3.6e-10774.44Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067540 PE=4 SV=1[more]
A0A0A0K7L0_CUCSA1.8e-10375.37Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1[more]
E5GCQ4_CUCME5.3e-10374.91Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GCQ3_CUCME2.0e-8664.79Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of CSPI07G06340 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18770.12.1e-1035.00 RING/U-box superfamily protein[more]
AT1G14200.12.3e-0937.04 RING/U-box superfamily protein[more]
AT1G26800.13.1e-0947.27 RING/U-box superfamily protein[more]
AT1G74620.12.6e-0837.70 RING/U-box superfamily protein[more]
AT3G15740.14.4e-0835.96 RING/U-box superfamily protein[more]
BLAST of CSPI07G06340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188567|gb|KGN43800.1|9.8e-14399.22hypothetical protein Csa_7G067550 [Cucumis sativus][more]
gi|778730182|ref|XP_011659721.1|5.1e-10774.44PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus][more]
gi|700188568|gb|KGN43801.1|2.6e-10375.37hypothetical protein Csa_7G067560 [Cucumis sativus][more]
gi|659111005|ref|XP_008455526.1|7.6e-10374.91PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo][more]
gi|659111003|ref|XP_008455525.1|2.9e-8664.79PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06340.1CSPI07G06340.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 200..247
score: 4.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 201..246
score: 3.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 201..247
score: 1
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 200..247
score: 6.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 190..251
score: 4.8
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 72..255
score: 7.8
NoneNo IPR availablePANTHERPTHR22763:SF78E3 UBIQUITIN-PROTEIN LIGASE RHA2Acoord: 72..255
score: 7.8
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 188..252
score: 2.07

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G06340Cucumber (Gy14) v2cgybcpiB332
CSPI07G06340Silver-seed gourdcarcpiB0214
CSPI07G06340Silver-seed gourdcarcpiB0322
CSPI07G06340Silver-seed gourdcarcpiB0414
CSPI07G06340Silver-seed gourdcarcpiB0493
CSPI07G06340Silver-seed gourdcarcpiB0766
CSPI07G06340Silver-seed gourdcarcpiB0767
CSPI07G06340Cucumber (Chinese Long) v3cpicucB415
CSPI07G06340Watermelon (97103) v2cpiwmbB542
CSPI07G06340Watermelon (97103) v2cpiwmbB554
CSPI07G06340Watermelon (97103) v2cpiwmbB584
CSPI07G06340Wax gourdcpiwgoB685
CSPI07G06340Wax gourdcpiwgoB659
CSPI07G06340Wax gourdcpiwgoB672
CSPI07G06340Cucumber (Gy14) v1cgycpiB336
CSPI07G06340Cucurbita maxima (Rimu)cmacpiB143
CSPI07G06340Cucurbita maxima (Rimu)cmacpiB156
CSPI07G06340Cucurbita maxima (Rimu)cmacpiB534
CSPI07G06340Cucurbita maxima (Rimu)cmacpiB541
CSPI07G06340Cucurbita moschata (Rifu)cmocpiB134
CSPI07G06340Cucurbita moschata (Rifu)cmocpiB136
CSPI07G06340Cucurbita moschata (Rifu)cmocpiB525
CSPI07G06340Cucurbita moschata (Rifu)cmocpiB531
CSPI07G06340Cucurbita moschata (Rifu)cmocpiB777
CSPI07G06340Cucumber (Chinese Long) v2cpicuB354
CSPI07G06340Melon (DHL92) v3.5.1cpimeB538
CSPI07G06340Melon (DHL92) v3.5.1cpimeB557
CSPI07G06340Watermelon (Charleston Gray)cpiwcgB541
CSPI07G06340Watermelon (Charleston Gray)cpiwcgB561
CSPI07G06340Watermelon (Charleston Gray)cpiwcgB576
CSPI07G06340Watermelon (Charleston Gray)cpiwcgB599
CSPI07G06340Watermelon (97103) v1cpiwmB574
CSPI07G06340Watermelon (97103) v1cpiwmB594
CSPI07G06340Watermelon (97103) v1cpiwmB596
CSPI07G06340Cucurbita pepo (Zucchini)cpecpiB258
CSPI07G06340Cucurbita pepo (Zucchini)cpecpiB264
CSPI07G06340Cucurbita pepo (Zucchini)cpecpiB472
CSPI07G06340Cucurbita pepo (Zucchini)cpecpiB696
CSPI07G06340Cucurbita pepo (Zucchini)cpecpiB697
CSPI07G06340Bottle gourd (USVL1VR-Ls)cpilsiB532
CSPI07G06340Bottle gourd (USVL1VR-Ls)cpilsiB534
CSPI07G06340Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G06340Melon (DHL92) v3.6.1cpimedB558
CSPI07G06340Melon (DHL92) v3.6.1cpimedB523