CSPI07G06170 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G06170
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Multidrug resistance protein ABC transporter family
Location	Chr7 : 4587577 .. 4588132 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAAGTCTAGTTTCTCTTGAACTTTCACCCCTCGACCTGATTTTCTCCTCCCCTCCACTCTTCCCCTTGGCCTTTACTTTGATGATGATGAGATATGGAAGGCATTAGAGAGGTGTCAGCTGAAGGCCACTGTCAGCAGTCTACCAAATCAGCTCGACTCATCTGTGGAAACTGGAGTGTGGGAAAACGCCAACTCTTCCGTCTCGGTCGAGTGCTACTCATACGACATAAAATTCTCGTTCTCGATGAGGCTACCACTTCAATCGACTCGGCAACTGACACCATTTTACAAAGAATTATAAGGGAAGGAGTTTTCAGAATGCACTATTGTAACAGTAGCTCACAGAGTTCTACCGTCTTTGACAATGACTTTGGTCATTTAGTTGAATATGAAGAACCCTCAAAGCTGATGGAAACCAACTCTTATTTCTCCAAACTTGTAAGCTGATCAATACTGGGCTAGCTGTCGGAGAGACTCTTCTCATTACTAAACACAACGTCTTGAAAACAAAGTATTGCTCTTTTTTTGGTACAATTGTAGAGATAAGAACCG

mRNA sequence

ATGGAAGGCATTAGAGAGGTGTCAGCTGAAGGCCACTGTCAGCAGTCTACCAAATCAGCTCGACTCATCTGTGGAAACTGGAGTGTGGGAAAACGCCAACTCTTCCGTCTCGGTCGAGTGCTACTCATACGACATAAAATTCTCGTTCTCGATGAGGCTACCACTTCAATCGACTCGGCAACTGACACCATTTTACAAAGAATTATAAGGGAAGGAGTTTTCAGAATGCACTATTGTAACAGTAGCTCACAGAGTTCTACCGTCTTTGACAATGACTTTGGTCATTTAGTTGAATATGAAGAACCCTCAAAGCTGATGGAAACCAACTCTTATTTCTCCAAACTTGTAAGCTGA

Coding sequence (CDS)

ATGGAAGGCATTAGAGAGGTGTCAGCTGAAGGCCACTGTCAGCAGTCTACCAAATCAGCTCGACTCATCTGTGGAAACTGGAGTGTGGGAAAACGCCAACTCTTCCGTCTCGGTCGAGTGCTACTCATACGACATAAAATTCTCGTTCTCGATGAGGCTACCACTTCAATCGACTCGGCAACTGACACCATTTTACAAAGAATTATAAGGGAAGGAGTTTTCAGAATGCACTATTGTAACAGTAGCTCACAGAGTTCTACCGTCTTTGACAATGACTTTGGTCATTTAGTTGAATATGAAGAACCCTCAAAGCTGATGGAAACCAACTCTTATTTCTCCAAACTTGTAAGCTGA

Homology

[Close]

BLAST of CSPI07G06170 vs. Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-24
Identity = 64/98 (65.31%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWSVG+RQLF LGRVLL R+KILVLDEAT SIDSATD I+QRIIRE          + + 
Sbjct: 1351 NWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRV 1410

Query: 86   STVFDND------FGHLVEYEEPSKLMETNSYFSKLVS 118
             TV D+D      FG LVEY EPSKLMET+SYFSKLV+
Sbjct: 1411 PTVIDSDMVMVLSFGDLVEYNEPSKLMETDSYFSKLVA 1448

[Close]

BLAST of CSPI07G06170 vs. Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 3.6e-15
Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWS+G+RQLF LGR +L R ++LVLDEAT SID+ATD ILQ+ IR           + + 
Sbjct: 1343 NWSMGQRQLFCLGRAVLRRSRVLVLDEATASIDNATDLILQKTIRREFADCTVITVAHRI 1402

Query: 86   STVFDNDF------GHLVEYEEPSKLM-ETNSYFSKLV 117
             TV D         G +VEY+EP KLM + NS F KLV
Sbjct: 1403 PTVMDCTMVLSISDGRIVEYDEPMKLMKDENSLFGKLV 1440

[Close]

BLAST of CSPI07G06170 vs. Swiss-Prot
Match: AB13C_ORYSI (ABC transporter C family member 13 OS=Oryza sativa subsp. indica GN=ABCC13 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.7e-15
Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWSVG+RQL  LGR LL + KILVLDEAT S+D+ATD ++Q+IIR        C  + + 
Sbjct: 1398 NWSVGQRQLIALGRALLKQAKILVLDEATASVDTATDNLIQKIIRSEFKDCTVCTIAHRI 1457

Query: 86   STVFDNDF------GHLVEYEEPSKLME-TNSYFSKLVS 118
             TV D+D       G + E++ P +L+E  +S F +LVS
Sbjct: 1458 PTVIDSDLVLVLSDGKIAEFDTPQRLLEDKSSMFMQLVS 1496

[Close]

BLAST of CSPI07G06170 vs. Swiss-Prot
Match: AB13C_ORYSJ (ABC transporter C family member 13 OS=Oryza sativa subsp. japonica GN=ABCC13 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.7e-15
Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWSVG+RQL  LGR LL + KILVLDEAT S+D+ATD ++Q+IIR        C  + + 
Sbjct: 1398 NWSVGQRQLIALGRALLKQAKILVLDEATASVDTATDNLIQKIIRSEFKDCTVCTIAHRI 1457

Query: 86   STVFDNDF------GHLVEYEEPSKLME-TNSYFSKLVS 118
             TV D+D       G + E++ P +L+E  +S F +LVS
Sbjct: 1458 PTVIDSDLVLVLSDGKIAEFDTPQRLLEDKSSMFMQLVS 1496

[Close]

BLAST of CSPI07G06170 vs. Swiss-Prot
Match: AB4C_MAIZE (ABC transporter C family MRP4 OS=Zea mays GN=MRP4 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.1e-15
Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWSVG+RQL  LGR LL + KILVLDEAT S+D+ATD ++Q+IIR        C  + + 
Sbjct: 1403 NWSVGQRQLIALGRALLKQAKILVLDEATASVDTATDNLIQKIIRSEFKDCTVCTIAHRI 1462

Query: 86   STVFDNDF------GHLVEYEEPSKLME-TNSYFSKLVS 118
             TV D+D       G + E++ P +L+E  +S F +LVS
Sbjct: 1463 PTVIDSDLVLVLSDGKIAEFDTPQRLLEDKSSMFIQLVS 1501

[Close]

BLAST of CSPI07G06170 vs. TrEMBL
Match: A0A0A0K7I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067360 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 4.8e-59
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MEGIREVSAEGHCQQSTKSARLICGNWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSA 60
           MEGIREVSAEGHCQQSTKSARLICGNWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSA
Sbjct: 1   MEGIREVSAEGHCQQSTKSARLICGNWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSA 60

Query: 61  TDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYFSKLVS 118
           TDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYFSKLVS
Sbjct: 61  TDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYFSKLVS 117

[Close]

BLAST of CSPI07G06170 vs. TrEMBL
Match: A0A0A0K2Q3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067380 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-27
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 1


Query: 53  ATTSIDSATDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYF 112
           AT SIDSATDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYF
Sbjct: 115 ATASIDSATDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYF 174

Query: 113 SKLVS 118
           SKLV+
Sbjct: 175 SKLVA 179

[Close]

BLAST of CSPI07G06170 vs. TrEMBL
Match: A0A0A0KCQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G451910 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-25
Identity = 68/99 (68.69%), Postives = 76/99 (76.77%), Query Frame = 1


Query: 25   GNWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQ 84
            GNWSVG+RQLF LGRVLL R+KILVLDEAT SIDSATDT+LQRIIRE          + +
Sbjct: 1076 GNWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDTVLQRIIREEFSECTVVTVAHR 1135

Query: 85   SSTVFDND------FGHLVEYEEPSKLMETNSYFSKLVS 118
              TV D+D      FG+LVEYEEPSKLMETNSYFSKLV+
Sbjct: 1136 VPTVIDSDKVMVLSFGNLVEYEEPSKLMETNSYFSKLVA 1174

[Close]

BLAST of CSPI07G06170 vs. TrEMBL
Match: V4M618_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10019895mg PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-22
Identity = 64/98 (65.31%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWSVG+RQLF LGRVLL R+KILVLDEAT SIDSATD I+QRIIRE          + + 
Sbjct: 1347 NWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRV 1406

Query: 86   STVFDND------FGHLVEYEEPSKLMETNSYFSKLVS 118
             TV D+D      FG LVEY EPSKLMET+SYFSKLV+
Sbjct: 1407 PTVIDSDMVMVLSFGELVEYNEPSKLMETDSYFSKLVA 1444

[Close]

BLAST of CSPI07G06170 vs. TrEMBL
Match: D7L0Q7_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_673077 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-22
Identity = 64/98 (65.31%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWSVG+RQLF LGRVLL R+KILVLDEAT SIDSATD I+QRIIRE          + + 
Sbjct: 1184 NWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRV 1243

Query: 86   STVFDND------FGHLVEYEEPSKLMETNSYFSKLVS 118
             TV D+D      FG LVEY EPSKLMET+SYFSKLV+
Sbjct: 1244 PTVIDSDMVMVLSFGDLVEYNEPSKLMETDSYFSKLVA 1281

[Close]

BLAST of CSPI07G06170 vs. TAIR10
Match: AT3G21250.2 (AT3G21250.2 multidrug resistance-associated protein 6)

HSP 1 Score: 113.6 bits (283), Expect = 8.2e-26
Identity = 64/98 (65.31%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWSVG+RQLF LGRVLL R+KILVLDEAT SIDSATD I+QRIIRE          + + 
Sbjct: 1351 NWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRV 1410

Query: 86   STVFDND------FGHLVEYEEPSKLMETNSYFSKLVS 118
             TV D+D      FG LVEY EPSKLMET+SYFSKLV+
Sbjct: 1411 PTVIDSDMVMVLSFGDLVEYNEPSKLMETDSYFSKLVA 1448

[Close]

BLAST of CSPI07G06170 vs. TAIR10
Match: AT3G59140.1 (AT3G59140.1 multidrug resistance-associated protein 14)

HSP 1 Score: 82.4 bits (202), Expect = 2.0e-16
Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWS+G+RQLF LGR +L R ++LVLDEAT SID+ATD ILQ+ IR           + + 
Sbjct: 1343 NWSMGQRQLFCLGRAVLRRSRVLVLDEATASIDNATDLILQKTIRREFADCTVITVAHRI 1402

Query: 86   STVFDNDF------GHLVEYEEPSKLM-ETNSYFSKLV 117
             TV D         G +VEY+EP KLM + NS F KLV
Sbjct: 1403 PTVMDCTMVLSISDGRIVEYDEPMKLMKDENSLFGKLV 1440

[Close]

BLAST of CSPI07G06170 vs. TAIR10
Match: AT1G04120.1 (AT1G04120.1 multidrug resistance-associated protein 5)

HSP 1 Score: 81.6 bits (200), Expect = 3.5e-16
Identity = 46/99 (46.46%), Postives = 64/99 (64.65%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWSVG+RQL  LGR LL + KILVLDEAT S+D+ATD ++Q+IIR        C  + + 
Sbjct: 1404 NWSVGQRQLVSLGRALLKQAKILVLDEATASVDTATDNLIQKIIRTEFEDCTVCTIAHRI 1463

Query: 86   STVFDNDF------GHLVEYEEPSKLME-TNSYFSKLVS 118
             TV D+D       G + E++ P++L+E  +S F KLV+
Sbjct: 1464 PTVIDSDLVLVLSDGRVAEFDTPARLLEDKSSMFLKLVT 1502

[Close]

BLAST of CSPI07G06170 vs. TAIR10
Match: AT3G13100.1 (AT3G13100.1 multidrug resistance-associated protein 7)

HSP 1 Score: 80.5 bits (197), Expect = 7.7e-16
Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWSVG+RQL  LGRVLL R K+L+LDEAT S+D+ATDT++Q  +R+          + + 
Sbjct: 1377 NWSVGQRQLVCLGRVLLKRSKVLILDEATASVDTATDTLIQETLRQHFSGCTVITIAHRI 1436

Query: 86   STVFDNDF------GHLVEYEEPSKLME-TNSYFSKLVS 118
            S+V D+D       G + E++ P++L+E  +S FSKLV+
Sbjct: 1437 SSVIDSDMVLLLDQGLIEEHDSPARLLEDKSSSFSKLVA 1475

[Close]

BLAST of CSPI07G06170 vs. TAIR10
Match: AT3G13080.1 (AT3G13080.1 multidrug resistance-associated protein 3)

HSP 1 Score: 80.5 bits (197), Expect = 7.7e-16
Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = 1


Query: 26   NWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQS 85
            NWS+G+RQL  LGRVLL R KILVLDEAT S+D+ATD ++Q+ +RE          + + 
Sbjct: 1405 NWSMGQRQLVCLGRVLLKRSKILVLDEATASVDTATDNLIQKTLREHFSDCTVITIAHRI 1464

Query: 86   STVFDNDF------GHLVEYEEPSKLME-TNSYFSKLVS 118
            S+V D+D       G + EY+ P +L+E  +S FSKLV+
Sbjct: 1465 SSVIDSDMVLLLSNGIIEEYDTPVRLLEDKSSSFSKLVA 1503

[Close]

BLAST of CSPI07G06170 vs. NCBI nr
Match: gi|700188548|gb|KGN43781.1| (hypothetical protein Csa_7G067360 [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 6.9e-59
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MEGIREVSAEGHCQQSTKSARLICGNWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSA 60
           MEGIREVSAEGHCQQSTKSARLICGNWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSA
Sbjct: 1   MEGIREVSAEGHCQQSTKSARLICGNWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSA 60

Query: 61  TDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYFSKLVS 118
           TDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYFSKLVS
Sbjct: 61  TDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYFSKLVS 117

[Close]

BLAST of CSPI07G06170 vs. NCBI nr
Match: gi|700188550|gb|KGN43783.1| (hypothetical protein Csa_7G067380 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 4.1e-27
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 1


Query: 53  ATTSIDSATDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYF 112
           AT SIDSATDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYF
Sbjct: 115 ATASIDSATDTILQRIIREGVFRMHYCNSSSQSSTVFDNDFGHLVEYEEPSKLMETNSYF 174

Query: 113 SKLVS 118
           SKLV+
Sbjct: 175 SKLVA 179

[Close]

BLAST of CSPI07G06170 vs. NCBI nr
Match: gi|778730516|ref|XP_011659804.1| (PREDICTED: ABC transporter C family member 8 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-25
Identity = 68/99 (68.69%), Postives = 76/99 (76.77%), Query Frame = 1


Query: 25   GNWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQ 84
            GNWSVG+RQLF LGRVLL R+KILVLDEAT SIDSATDT+LQRIIRE          + +
Sbjct: 1087 GNWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDTVLQRIIREEFSECTVVTVAHR 1146

Query: 85   SSTVFDND------FGHLVEYEEPSKLMETNSYFSKLVS 118
              TV D+D      FG+LVEYEEPSKLMETNSYFSKLV+
Sbjct: 1147 VPTVIDSDKVMVLSFGNLVEYEEPSKLMETNSYFSKLVA 1185

[Close]

BLAST of CSPI07G06170 vs. NCBI nr
Match: gi|700190303|gb|KGN45536.1| (hypothetical protein Csa_7G451910 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-25
Identity = 68/99 (68.69%), Postives = 76/99 (76.77%), Query Frame = 1


Query: 25   GNWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQ 84
            GNWSVG+RQLF LGRVLL R+KILVLDEAT SIDSATDT+LQRIIRE          + +
Sbjct: 1076 GNWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDTVLQRIIREEFSECTVVTVAHR 1135

Query: 85   SSTVFDND------FGHLVEYEEPSKLMETNSYFSKLVS 118
              TV D+D      FG+LVEYEEPSKLMETNSYFSKLV+
Sbjct: 1136 VPTVIDSDKVMVLSFGNLVEYEEPSKLMETNSYFSKLVA 1174

[Close]

BLAST of CSPI07G06170 vs. NCBI nr
Match: gi|659124820|ref|XP_008462364.1| (PREDICTED: ABC transporter C family member 8 [Cucumis melo])

HSP 1 Score: 122.9 bits (307), Expect = 3.8e-25
Identity = 68/99 (68.69%), Postives = 76/99 (76.77%), Query Frame = 1


Query: 25   GNWSVGKRQLFRLGRVLLIRHKILVLDEATTSIDSATDTILQRIIREGVFRMHYCNSSSQ 84
            GNWSVG+RQLF LGRVLL R++ILVLDEAT SIDSATDTILQRIIRE          + +
Sbjct: 1161 GNWSVGQRQLFCLGRVLLKRNRILVLDEATASIDSATDTILQRIIREEFSECTVVTVAHR 1220

Query: 85   SSTVFDND------FGHLVEYEEPSKLMETNSYFSKLVS 118
              TV D+D      FG+LVEYEEPSKLMETNSYFSKLV+
Sbjct: 1221 VPTVIDSDKVMVLSFGNLVEYEEPSKLMETNSYFSKLVA 1259

The following BLAST results are available for this feature:

BLAST of CSPI07G06170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AB8C_ARATH	1.5e-24	65.31	ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3	[more]
AB10C_ARATH	3.6e-15	50.00	ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=2	[more]
AB13C_ORYSI	4.7e-15	46.46	ABC transporter C family member 13 OS=Oryza sativa subsp. indica GN=ABCC13 PE=3 ...	[more]
AB13C_ORYSJ	4.7e-15	46.46	ABC transporter C family member 13 OS=Oryza sativa subsp. japonica GN=ABCC13 PE=...	[more]
AB4C_MAIZE	6.1e-15	46.46	ABC transporter C family MRP4 OS=Zea mays GN=MRP4 PE=2 SV=1	[more]

BLAST of CSPI07G06170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7I7_CUCSA	4.8e-59	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067360 PE=4 SV=1	[more]
A0A0A0K2Q3_CUCSA	2.9e-27	96.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067380 PE=4 SV=1	[more]
A0A0A0KCQ4_CUCSA	1.6e-25	68.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G451910 PE=4 SV=1	[more]
V4M618_EUTSA	1.2e-22	65.31	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10019895mg PE=4 SV=1	[more]
D7L0Q7_ARALL	1.6e-22	65.31	Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_673077 PE=4 ...	[more]

BLAST of CSPI07G06170 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21250.2	8.2e-26	65.31	multidrug resistance-associated protein 6	[more]
AT3G59140.1	2.0e-16	50.00	multidrug resistance-associated protein 14	[more]
AT1G04120.1	3.5e-16	46.46	multidrug resistance-associated protein 5	[more]
AT3G13100.1	7.7e-16	45.45	multidrug resistance-associated protein 7	[more]
AT3G13080.1	7.7e-16	47.47	multidrug resistance-associated protein 3	[more]

BLAST of CSPI07G06170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700188548\|gb\|KGN43781.1\|	6.9e-59	100.00	hypothetical protein Csa_7G067360 [Cucumis sativus]	[more]
gi\|700188550\|gb\|KGN43783.1\|	4.1e-27	96.92	hypothetical protein Csa_7G067380 [Cucumis sativus]	[more]
gi\|778730516\|ref\|XP_011659804.1\|	2.3e-25	68.69	PREDICTED: ABC transporter C family member 8 [Cucumis sativus]	[more]
gi\|700190303\|gb\|KGN45536.1\|	2.3e-25	68.69	hypothetical protein Csa_7G451910 [Cucumis sativus]	[more]
gi\|659124820\|ref\|XP_008462364.1\|	3.8e-25	68.69	PREDICTED: ABC transporter C family member 8 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G06170.1	CSPI07G06170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 25..111 score: 4.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 26..116 score: 6.23
None	No IPR available	PANTHER	PTHR24223	FAMILY NOT NAMED	coord: 25..116 score: 5.0
None	No IPR available	PANTHER	PTHR24223:SF108	ABC TRANSPORTER C FAMILY MEMBER 8	coord: 25..116 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G06170	Csa7G067360	Cucumber (Chinese Long) v2	cpicuB354

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G06170	Cucumber (Gy14) v1	cgycpiB336
CSPI07G06170	Cucurbita maxima (Rimu)	cmacpiB143
CSPI07G06170	Cucurbita maxima (Rimu)	cmacpiB534
CSPI07G06170	Cucurbita moschata (Rifu)	cmocpiB136
CSPI07G06170	Cucurbita moschata (Rifu)	cmocpiB525
CSPI07G06170	Cucurbita moschata (Rifu)	cmocpiB777
CSPI07G06170	Melon (DHL92) v3.5.1	cpimeB538
CSPI07G06170	Watermelon (Charleston Gray)	cpiwcgB541
CSPI07G06170	Watermelon (Charleston Gray)	cpiwcgB561
CSPI07G06170	Watermelon (97103) v1	cpiwmB574
CSPI07G06170	Watermelon (97103) v1	cpiwmB594
CSPI07G06170	Cucurbita pepo (Zucchini)	cpecpiB258
CSPI07G06170	Cucurbita pepo (Zucchini)	cpecpiB472
CSPI07G06170	Cucurbita pepo (Zucchini)	cpecpiB697
CSPI07G06170	Bottle gourd (USVL1VR-Ls)	cpilsiB534
CSPI07G06170	Bottle gourd (USVL1VR-Ls)	cpilsiB536
CSPI07G06170	Melon (DHL92) v3.6.1	cpimedB558
CSPI07G06170	Melon (DHL92) v3.6.1	cpimedB523
CSPI07G06170	Cucumber (Gy14) v2	cgybcpiB332
CSPI07G06170	Silver-seed gourd	carcpiB0323
CSPI07G06170	Silver-seed gourd	carcpiB0414
CSPI07G06170	Silver-seed gourd	carcpiB0767
CSPI07G06170	Cucumber (Chinese Long) v3	cpicucB415
CSPI07G06170	Watermelon (97103) v2	cpiwmbB542
CSPI07G06170	Watermelon (97103) v2	cpiwmbB584
CSPI07G06170	Wax gourd	cpiwgoB659
CSPI07G06170	Wax gourd	cpiwgoB672