CSPI07G04280 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G04280
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionWound-responsive family protein
LocationChr7 : 3258116 .. 3258651 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCTCCACTCTCCACGTGTTTCTGAAAAACAAAACAAAACCAGGGGGCGCGATTTTCCCATCTATAATAATCTAATCTATTACAGTTCTATATATAATGAGCAAATCCCAATTCATTTTCAAGCATCCAAAATTCAAAAACACACAGATACCAAAAAAATGAGTTGTTGCAGAAAAGGTTGGGTTGTAGCTGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCGCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCAGCCGCGGTTTCCGATCACAAATGGAACCAATCAGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGCCCCAATAACTGATCGTTCCACATCACATATACCTTTTTTCTTTACTCTATTAGATTACTGTTGTGTATATGTATATATATCCACTTCAATTCAAAATCAATGGAAGAGTTTTTCTTAATCATATTTTGTTT

mRNA sequence

ATGAGTTGTTGCAGAAAAGGTTGGGTTGTAGCTGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCGCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCAGCCGCGGTTTCCGATCACAAATGGAACCAATCAGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGCCCCAATAACTGA

Coding sequence (CDS)

ATGAGTTGTTGCAGAAAAGGTTGGGTTGTAGCTGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCGCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCAGCCGCGGTTTCCGATCACAAATGGAACCAATCAGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGCCCCAATAACTGA
Homology
[Close]
BLAST of CSPI07G04280 vs. TrEMBL
Match: A0A0A0K3P5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046670 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 7.9e-43
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SDHKWNQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

[Close]
BLAST of CSPI07G04280 vs. TrEMBL
Match: A0A0D2PKH2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G206000 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-27
Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS   + WVVAAS+G VEALKDQGICRWN+T+RS+ Q+AKNHVRS SQAK LSS S+AA+
Sbjct: 1  MSSTSRAWVVAASIGAVEALKDQGICRWNYTVRSVVQHAKNHVRSASQAKNLSSQSSAAI 60

Query: 61 SD--HKWNQSEESLRTVMYLSCWGPN 85
          S   +K+ QSEESLRTVMYLSCWGPN
Sbjct: 61 SKGLNKYKQSEESLRTVMYLSCWGPN 86

[Close]
BLAST of CSPI07G04280 vs. TrEMBL
Match: A0A0D2N5Q5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G205900 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 7.9e-27
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS   + W+VAAS+G VEALKDQGICRWN+T+RS+ Q+AKNHVRS SQAK LSS S+AA+
Sbjct: 1  MSSSSRAWIVAASIGAVEALKDQGICRWNYTVRSVVQHAKNHVRSASQAKNLSSQSSAAI 60

Query: 61 SD--HKWNQSEESLRTVMYLSCWGPN 85
          S   +K  QSEESLRTVMYLSCWGPN
Sbjct: 61 SKGLNKSKQSEESLRTVMYLSCWGPN 86

[Close]
BLAST of CSPI07G04280 vs. TrEMBL
Match: F6HHI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g00090 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.0e-26
Identity = 63/88 (71.59%), Postives = 71/88 (80.68%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS   K W+VAASVG VEALKDQG CRWN+T+RS+ Q+AKN++RS SQAKKLSS S+A V
Sbjct: 1  MSHMGKAWIVAASVGAVEALKDQGFCRWNYTLRSIHQHAKNNLRSFSQAKKLSSSSSAMV 60

Query: 61 S----DHKWNQSEESLRTVMYLSCWGPN 85
          S    D K  QSEESLRTVMYLSCWGPN
Sbjct: 61 SSRVRDEKAKQSEESLRTVMYLSCWGPN 88

[Close]
BLAST of CSPI07G04280 vs. TrEMBL
Match: A0A0A0K6Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046640 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-25
Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS   +  VVAA+VGVVEALKDQGICRWNH +RS   YA+NHVRSISQAKKLSS   A  
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSS---AVP 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          S +++ QSEESLRTVMYLSCWGPNN
Sbjct: 61 SANRFQQSEESLRTVMYLSCWGPNN 82

[Close]
BLAST of CSPI07G04280 vs. TAIR10
Match: AT4G10265.1 (AT4G10265.1 Wound-responsive family protein)

HSP 1 Score: 109.0 bits (271), Expect = 1.5e-24
Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQ-GICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAA 60
          MS   K W+VAAS+G VEALKDQ G+CRWN+ IRS  QY +N++RS+SQAKKLSS S   
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDY 60

Query: 61 VSDHKWNQSEESLRTVMYLSCWGPN 85
             +K  Q+EESLRTVMYLSCWGP+
Sbjct: 61 T--NKTKQAEESLRTVMYLSCWGPS 83

[Close]
BLAST of CSPI07G04280 vs. TAIR10
Match: AT4G10270.1 (AT4G10270.1 Wound-responsive family protein)

HSP 1 Score: 104.0 bits (258), Expect = 4.7e-23
Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQ-GICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAA 60
          MS   K W VA S+G VEALKDQ G+CRWN+ +RS+ Q+ +N+VRS+SQ K+ SS S +A
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 V-----SDHKWNQSEESLRTVMYLSCWGPN 85
                   K  ++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]
BLAST of CSPI07G04280 vs. TAIR10
Match: AT4G33560.1 (AT4G33560.1 Wound-responsive family protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.9e-08
Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 1 

Query: 8  WVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSP----SAAAVSDH 67
          W VA ++  VE LKDQG+ RWN+  R L + A   VR+I+   + S P    SA ++   
Sbjct: 9  WAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSK 68

Query: 68 KWNQS--EESLRTVMYLSCWGP 84
            + +  E S    M LSC+GP
Sbjct: 69 PLSTTPFETSFEKAMGLSCFGP 90

[Close]
BLAST of CSPI07G04280 vs. NCBI nr
Match: gi|449438062|ref|XP_004136809.1| (PREDICTED: uncharacterized protein LOC101202743 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SDHKWNQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

[Close]
BLAST of CSPI07G04280 vs. NCBI nr
Match: gi|659110681|ref|XP_008455355.1| (PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 5.3e-40
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAA V
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

[Close]
BLAST of CSPI07G04280 vs. NCBI nr
Match: gi|778723985|ref|XP_011658732.1| (PREDICTED: uncharacterized protein LOC101213259 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-27
Identity = 64/85 (75.29%), Postives = 70/85 (82.35%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS  R+ W+VAASVGVVEALKDQGICRWNHTIRS  QYAKNHVRS+ QA +L+  SAA V
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60

Query: 61 SD-HKWNQSEESLRTVMYLSCWGPN 85
          S   +  QSEESLRTVMYLSCWGPN
Sbjct: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85

[Close]
BLAST of CSPI07G04280 vs. NCBI nr
Match: gi|823159834|ref|XP_012479753.1| (PREDICTED: uncharacterized protein LOC105794912 [Gossypium raimondii])

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-27
Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS   + WVVAAS+G VEALKDQGICRWN+T+RS+ Q+AKNHVRS SQAK LSS S+AA+
Sbjct: 1  MSSTSRAWVVAASIGAVEALKDQGICRWNYTVRSVVQHAKNHVRSASQAKNLSSQSSAAI 60

Query: 61 SD--HKWNQSEESLRTVMYLSCWGPN 85
          S   +K+ QSEESLRTVMYLSCWGPN
Sbjct: 61 SKGLNKYKQSEESLRTVMYLSCWGPN 86

[Close]
BLAST of CSPI07G04280 vs. NCBI nr
Match: gi|659110683|ref|XP_008455356.1| (PREDICTED: uncharacterized protein LOC103495543 [Cucumis melo])

HSP 1 Score: 129.4 bits (324), Expect = 3.0e-27
Identity = 63/85 (74.12%), Postives = 70/85 (82.35%), Query Frame = 1 

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS  R+ W+VAASVGVVEALKDQGICRWNHTIRS  QYA+NHVRS+ QA +L+  SAA V
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SDH-KWNQSEESLRTVMYLSCWGPN 85
          S   +  QSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

The following BLAST results are available for this feature:
BLAST of CSPI07G04280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G04280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3P5_CUCSA7.9e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046670 PE=4 SV=1[more]
A0A0D2PKH2_GOSRA1.6e-2773.26Uncharacterized protein OS=Gossypium raimondii GN=B456_005G206000 PE=4 SV=1[more]
A0A0D2N5Q5_GOSRA7.9e-2772.09Uncharacterized protein OS=Gossypium raimondii GN=B456_005G205900 PE=4 SV=1[more]
F6HHI7_VITVI3.0e-2671.59Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g00090 PE=4 SV=... [more]
A0A0A0K6Y8_CUCSA1.9e-2572.94Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046640 PE=4 SV=1[more]
BLAST of CSPI07G04280 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10265.11.5e-2464.71 Wound-responsive family protein[more]
AT4G10270.14.7e-2356.67 Wound-responsive family protein[more]
AT4G33560.11.9e-0837.80 Wound-responsive family protein[more]
BLAST of CSPI07G04280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438062|ref|XP_004136809.1|1.1e-42100.00PREDICTED: uncharacterized protein LOC101202743 [Cucumis sativus][more]
gi|659110681|ref|XP_008455355.1|5.3e-4095.29PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo][more]
gi|778723985|ref|XP_011658732.1|1.0e-2775.29PREDICTED: uncharacterized protein LOC101213259 [Cucumis sativus][more]
gi|823159834|ref|XP_012479753.1|2.3e-2773.26PREDICTED: uncharacterized protein LOC105794912 [Gossypium raimondii][more]
gi|659110683|ref|XP_008455356.1|3.0e-2774.12PREDICTED: uncharacterized protein LOC103495543 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022251DUF3774_wound-induced
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G04280.1CSPI07G04280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 10..83
score: 7.2
NoneNo IPR availablePANTHERPTHR33090FAMILY NOT NAMEDcoord: 1..84
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G04280Cucumber (Chinese Long) v2cpicuB354
CSPI07G04280Melon (DHL92) v3.5.1cpimeB538
CSPI07G04280Melon (DHL92) v3.5.1cpimeB575
CSPI07G04280Watermelon (Charleston Gray)cpiwcgB566
CSPI07G04280Watermelon (Charleston Gray)cpiwcgB574
CSPI07G04280Watermelon (Charleston Gray)cpiwcgB583
CSPI07G04280Watermelon (97103) v1cpiwmB600
CSPI07G04280Watermelon (97103) v1cpiwmB612
CSPI07G04280Watermelon (97103) v1cpiwmB614
CSPI07G04280Cucurbita pepo (Zucchini)cpecpiB257
CSPI07G04280Cucurbita pepo (Zucchini)cpecpiB301
CSPI07G04280Cucurbita pepo (Zucchini)cpecpiB692
CSPI07G04280Cucurbita pepo (Zucchini)cpecpiB768
CSPI07G04280Bottle gourd (USVL1VR-Ls)cpilsiB500
CSPI07G04280Bottle gourd (USVL1VR-Ls)cpilsiB505
CSPI07G04280Bottle gourd (USVL1VR-Ls)cpilsiB516
CSPI07G04280Bottle gourd (USVL1VR-Ls)cpilsiB522
CSPI07G04280Melon (DHL92) v3.6.1cpimedB509
CSPI07G04280Melon (DHL92) v3.6.1cpimedB523
CSPI07G04280Melon (DHL92) v3.6.1cpimedB560
CSPI07G04280Cucumber (Gy14) v2cgybcpiB332
CSPI07G04280Silver-seed gourdcarcpiB0034
CSPI07G04280Silver-seed gourdcarcpiB0176
CSPI07G04280Silver-seed gourdcarcpiB0673
CSPI07G04280Silver-seed gourdcarcpiB0755
CSPI07G04280Silver-seed gourdcarcpiB0911
CSPI07G04280Cucumber (Chinese Long) v3cpicucB380
CSPI07G04280Cucumber (Chinese Long) v3cpicucB409
CSPI07G04280Cucumber (Chinese Long) v3cpicucB415
CSPI07G04280Watermelon (97103) v2cpiwmbB562
CSPI07G04280Watermelon (97103) v2cpiwmbB553
CSPI07G04280Watermelon (97103) v2cpiwmbB539
CSPI07G04280Wax gourdcpiwgoB694
CSPI07G04280Wax gourdcpiwgoB673
CSPI07G04280Wax gourdcpiwgoB699
CSPI07G04280Wild cucumber (PI 183967)cpicpiB050
CSPI07G04280Wild cucumber (PI 183967)cpicpiB188
CSPI07G04280Cucumber (Gy14) v1cgycpiB029
CSPI07G04280Cucumber (Gy14) v1cgycpiB176
CSPI07G04280Cucumber (Gy14) v1cgycpiB220
CSPI07G04280Cucurbita maxima (Rimu)cmacpiB144
CSPI07G04280Cucurbita maxima (Rimu)cmacpiB233
CSPI07G04280Cucurbita maxima (Rimu)cmacpiB533
CSPI07G04280Cucurbita maxima (Rimu)cmacpiB650
CSPI07G04280Cucurbita moschata (Rifu)cmocpiB131
CSPI07G04280Cucurbita moschata (Rifu)cmocpiB220
CSPI07G04280Cucurbita moschata (Rifu)cmocpiB419
CSPI07G04280Cucurbita moschata (Rifu)cmocpiB524
CSPI07G04280Cucurbita moschata (Rifu)cmocpiB568
CSPI07G04280Cucurbita moschata (Rifu)cmocpiB643