CSPI07G02270 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G02270
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 1969712 .. 1970025 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTCTGGCGAGAAAGATGGAGTTCATTAGCGTTTCCTTTGAAGAAACCTGAAAAGACTCAGAAACTTCCCCTAGATATGAGCTTTAACTGTACGCTGGCTTAAGTCAACCGATGCTTGCAGAGAATCTATGTGATAGCTTTTTGAGTCATGGAAAAATTAATACTAGTGATCTCATGAATGTTGGACGAATTGTCTCAGTTTACTCTCCTCATTCTTTTGCTCAGTTTCTTAAGCTGTTGGGATCCAGAAATTCCCATGCCCTGCTTGGCAGTGTCACTGATTCACTAGTCTGTGCAGAGAAAAGCTGA

mRNA sequence

ATGAAGTTCTGGCGAGAAAGATGGAGTTCATTAGCGTTTCCTTTGAAGAAACCTGAAAAGACTCAGAAACTTCCCCTAGATATGAGCTTTAACTTTTACTCTCCTCATTCTTTTGCTCAGTTTCTTAAGCTGTTGGGATCCAGAAATTCCCATGCCCTGCTTGGCAGTGTCACTGATTCACTAGTCTGTGCAGAGAAAAGCTGA

Coding sequence (CDS)

ATGAAGTTCTGGCGAGAAAGATGGAGTTCATTAGCGTTTCCTTTGAAGAAACCTGAAAAGACTCAGAAACTTCCCCTAGATATGAGCTTTAACTTTTACTCTCCTCATTCTTTTGCTCAGTTTCTTAAGCTGTTGGGATCCAGAAATTCCCATGCCCTGCTTGGCAGTGTCACTGATTCACTAGTCTGTGCAGAGAAAAGCTGA
Homology
[Close]
BLAST of CSPI07G02270 vs. TrEMBL
Match: A0A0A0K0Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027860 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 6.0e-30
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1  MKFWRERWSSLAFPLKKPEKTQKLPLDMSFNFYSPHSFAQFLKLLGSRNSHALLGSVTDS 60
          MKFWRERWSSLAFPLKKPEKTQKLPLDMSFNFYSPHSFAQFLKLLGSRNS+ALLGSVTDS
Sbjct: 1  MKFWRERWSSLAFPLKKPEKTQKLPLDMSFNFYSPHSFAQFLKLLGSRNSNALLGSVTDS 60

Query: 61 LVCAEKS 68
          LVCAEKS
Sbjct: 61 LVCAEKS 67

[Close]
BLAST of CSPI07G02270 vs. NCBI nr
Match: gi|700188137|gb|KGN43370.1| (hypothetical protein Csa_7G027860 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 8.7e-30
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1  MKFWRERWSSLAFPLKKPEKTQKLPLDMSFNFYSPHSFAQFLKLLGSRNSHALLGSVTDS 60
          MKFWRERWSSLAFPLKKPEKTQKLPLDMSFNFYSPHSFAQFLKLLGSRNS+ALLGSVTDS
Sbjct: 1  MKFWRERWSSLAFPLKKPEKTQKLPLDMSFNFYSPHSFAQFLKLLGSRNSNALLGSVTDS 60

Query: 61 LVCAEKS 68
          LVCAEKS
Sbjct: 61 LVCAEKS 67

The following BLAST results are available for this feature:
BLAST of CSPI07G02270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G02270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K0Z8_CUCSA6.0e-3098.51Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027860 PE=4 SV=1[more]
BLAST of CSPI07G02270 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G02270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188137|gb|KGN43370.1|8.7e-3098.51hypothetical protein Csa_7G027860 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G02270.1CSPI07G02270.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G02270Csa7G027860Cucumber (Chinese Long) v2cpicuB354
CSPI07G02270CsaV3_7G002130Cucumber (Chinese Long) v3cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G02270Cucurbita pepo (Zucchini)cpecpiB257
CSPI07G02270Cucurbita pepo (Zucchini)cpecpiB692
CSPI07G02270Bottle gourd (USVL1VR-Ls)cpilsiB498
CSPI07G02270Bottle gourd (USVL1VR-Ls)cpilsiB505
CSPI07G02270Melon (DHL92) v3.6.1cpimedB506
CSPI07G02270Melon (DHL92) v3.6.1cpimedB530
CSPI07G02270Cucumber (Gy14) v2cgybcpiB332
CSPI07G02270Silver-seed gourdcarcpiB0235
CSPI07G02270Silver-seed gourdcarcpiB0892
CSPI07G02270Silver-seed gourdcarcpiB1103
CSPI07G02270Cucumber (Chinese Long) v3cpicucB411
CSPI07G02270Watermelon (97103) v2cpiwmbB553
CSPI07G02270Wax gourdcpiwgoB681
CSPI07G02270Wild cucumber (PI 183967)cpicpiB189
CSPI07G02270Cucumber (Gy14) v1cgycpiB112
CSPI07G02270Cucumber (Gy14) v1cgycpiB157
CSPI07G02270Cucurbita maxima (Rimu)cmacpiB044
CSPI07G02270Cucurbita maxima (Rimu)cmacpiB149
CSPI07G02270Cucurbita maxima (Rimu)cmacpiB533
CSPI07G02270Cucurbita moschata (Rifu)cmocpiB034
CSPI07G02270Cucurbita moschata (Rifu)cmocpiB131
CSPI07G02270Cucurbita moschata (Rifu)cmocpiB524
CSPI07G02270Cucumber (Chinese Long) v2cpicuB351
CSPI07G02270Melon (DHL92) v3.5.1cpimeB545
CSPI07G02270Melon (DHL92) v3.5.1cpimeB522
CSPI07G02270Watermelon (Charleston Gray)cpiwcgB574
CSPI07G02270Watermelon (Charleston Gray)cpiwcgB579
CSPI07G02270Watermelon (97103) v1cpiwmB624