CSPI07G02090 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G02090
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTransposon protein, putative, CACTA, En/Spm sub-class
LocationChr7 : 1780474 .. 1781306 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTTATGAAAAATGCTATGAGAAATCGACATCGTCCAGAGGGTTGTATTGCTGAAGGTTATTAGAAGAAGCTGTTGAATTTTGTTTAGAATTTGTATGTAGAGTAGATCCTATTGGACTTGGTTGTCAAAAGTTAAGAAACAGTTCTGACAATTCAGAACTTGGTAGACCATTGTCAAGTGGAGTTACTAACATACCTGAACGAGAGCTTTTACATCAAGCTCATCGATATGTTTTGGAGAATACTGTTGATGTGCAACCATATATAGAGTAAGTTCTTCTCTCTATAATCCATTTATTTCATTGAAATTCTTGAAATTTAAAGTAATTGTATTTCAACCTCTTGTTCTACTTTACAAGGAAACATTTGATCACATTGCAACAACAACACCGAAGTAGATCAAAAAACCAAAAATGGATTCAAGATGAACATAACAAAACCTTCATAGCTTGGTTACGAGAATAGGTATAACATGAAATTAAATATTTAACATTATCCTTCATCATTTATATTCTAATCGTCCAAGTCGTTGTCACTTAGGTTGGAACGGAACTTGCAACAGGAGATGTTGAGATTTCAGATAACTTGCGATGGATTGCTCATGGCCCTCATCTAGTTGTGACTACTTACAATAGTTATGCTATTAATGGATGTCACTACCACACAAAGTTGCATGACAAAAATAAAATTGTACACAATAGTGGAGTCAGTTTAGTTTCAAACGCAATGCAAGTATGTAGCTCGAAAGATAAAAATCCTATAATTGGAGAAATGTCCTTTTATGGTGTGATAGAAGAGATTTGGAAACTTAATTATAATACATTCAAG

mRNA sequence

ATGAAGGTTATGAAAAATGCTATGAGAAATCGACATCGTCCAGAGGGTTGTATTGCTGAAGAACTTGGTAGACCATTGTCAAGTGGAGTTACTAACATACCTGAACGAGAGCTTTTACATCAAGCTCATCGATATGTTTTGGAGAATACTGTTGATGTTGGAACGGAACTTGCAACAGGAGATGTTGAGATTTCAGATAACTTGCGATGGATTGCTCATGGCCCTCATCTAGTTGTGACTACTTACAATAGTTATGCTATTAATGGATGTCACTACCACACAAAGTTGCATGACAAAAATAAAATTGTACACAATAGTGGAGTCAGTTTAGTTTCAAACGCAATGCAAGTATGTAGCTCGAAAGATAAAAATCCTATAATTGGAGAAATGTCCTTTTATGGTGTGATAGAAGAGATTTGGAAACTTAATTATAATACATTCAAG

Coding sequence (CDS)

ATGAAGGTTATGAAAAATGCTATGAGAAATCGACATCGTCCAGAGGGTTGTATTGCTGAAGAACTTGGTAGACCATTGTCAAGTGGAGTTACTAACATACCTGAACGAGAGCTTTTACATCAAGCTCATCGATATGTTTTGGAGAATACTGTTGATGTTGGAACGGAACTTGCAACAGGAGATGTTGAGATTTCAGATAACTTGCGATGGATTGCTCATGGCCCTCATCTAGTTGTGACTACTTACAATAGTTATGCTATTAATGGATGTCACTACCACACAAAGTTGCATGACAAAAATAAAATTGTACACAATAGTGGAGTCAGTTTAGTTTCAAACGCAATGCAAGTATGTAGCTCGAAAGATAAAAATCCTATAATTGGAGAAATGTCCTTTTATGGTGTGATAGAAGAGATTTGGAAACTTAATTATAATACATTCAAG
Homology
[Close]
BLAST of CSPI07G02090 vs. TrEMBL
Match: A5C0H4_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_003281 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-29
Identity = 79/193 (40.93%), Postives = 96/193 (49.74%), Query Frame = 1 

Query: 2   KVMKNAMRNRHRPEGCIAE-------------------------------ELGRPLSSG- 61
           K     + N +RPEGCIAE                               + GRP++ G 
Sbjct: 285 KAFNGYVHNHNRPEGCIAECYLAEXAIEFFTEYLSGTHAIGIPKSNNYDNKFGRPITGGR 344

Query: 62  VTNIPERELLHQAHRYVLENTVDVGT--------------ELATGDVEISDNLRWIAHGP 121
            TNI  +  L QAH YVLENT  V                E      +I + LRW+AHGP
Sbjct: 345 STNIDHKSWL-QAHHYVLENTTIVQPYIDFQLCFDYTXVEEAIHNXQDIPNTLRWLAHGP 404

Query: 122 HLVVTTYNSYAINGCHYHTKLHDKNKIVHNSGVSLVSNAMQVCSSKDKNPIIGEMSFYGV 149
              V  Y  Y INGC YHTK HD   +  NSGVS++   MQ+ SSKDKNP+ GE+ FYGV
Sbjct: 405 THQVVKYPGYIINGCXYHTKEHDMTCVTQNSGVSILVGTMQIASSKDKNPVFGELCFYGV 464

[Close]
BLAST of CSPI07G02090 vs. TrEMBL
Match: A5C859_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036405 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-27
Identity = 75/203 (36.95%), Postives = 100/203 (49.26%), Query Frame = 1 

Query: 1   MKVMKNAMRNRHRPEGCIAE-------------------------------ELGRPLSSG 60
           MKV+K  +RN + PEGCI E                               ++G P+  G
Sbjct: 622 MKVLKGYVRNXNHPEGCIVECYIAEEAIEFCTEYLSNVDAIGVPSSTNVDHKVGAPIPGG 681

Query: 61  VTNIPERELLHQAHRYVLENTVDVG-----------------------TELATGDVE-IS 120
                +  LL QAH YVLENT  +                         E+A  D E I 
Sbjct: 682 HITKVDCNLLLQAHHYVLENTTIIQPYIEQKWLQEEHMRTFTHWLRKKVEVAIADKEPIX 741

Query: 121 DNLRWIAHGPHLVVTTYNSYAINGCHYHTKLHDKNKIVHNSGVSLVSNAMQVCSSKDKNP 149
           + LRW+AHGP   V  Y+ Y INGC Y+TK  D+ ++  NSGVS+V+  MQ+ S+KDKNP
Sbjct: 742 ETLRWMAHGPTHYVAKYHGYVINGCQYNTKDRDELRVTQNSGVSIVATTMQISSAKDKNP 801

[Close]
BLAST of CSPI07G02090 vs. TrEMBL
Match: A5AWJ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004106 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.1e-27
Identity = 70/168 (41.67%), Postives = 94/168 (55.95%), Query Frame = 1 

Query: 1   MKVMKNAMRNRHRPEGCIAE-------------------ELGRPLSSGVTNIPERELLHQ 60
           MKV+K  +RNR+RPEGCIAE                   +L  P  S       ++ L  
Sbjct: 661 MKVLKGYVRNRNRPEGCIAECYIAEEAIEFCTEEHMEWLKLKNPRQS-----KRQKWLQD 720

Query: 61  AHRYVLENTVDVGTELATGDVE-ISDNLRWIAHGPHLVVTTYNSYAINGCHYHTKLHDKN 120
            H       +    E A G+ E IS+ L+WIAHGP   V+ Y+ Y INGC YHTK  D  
Sbjct: 721 EHLRTFTYWLRKKIEAAIGNNEPISETLKWIAHGPSHYVSKYHGYVINGCRYHTKERDDL 780

Query: 121 KIVHNSGVSLVSNAMQVCSSKDKNPIIGEMSFYGVIEEIWKLNYNTFK 149
           +   NSGVS+V++ MQ+ S+KD+NP+ GE+ FYG+I EIW L+Y  F+
Sbjct: 781 RXTQNSGVSIVASTMQIASAKDQNPVFGELCFYGIITEIWDLDYTMFR 823

[Close]
BLAST of CSPI07G02090 vs. TrEMBL
Match: A5BUU3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006717 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 8.0e-27
Identity = 70/159 (44.03%), Postives = 92/159 (57.86%), Query Frame = 1 

Query: 1   MKVMKNAMRNRHRPEGCIAE--------ELGRPLSSGVT--NIPERELLHQAHRYVLENT 60
           MKV+K  +RN +RPEGCIAE        E      S V    IP    + Q     +   
Sbjct: 271 MKVLKGYVRNCNRPEGCIAECYIVEEGIEFYTEYLSNVEAIGIPSTSNIDQKVGASIFGG 330

Query: 61  VDVGTELATGDVE-ISDNLRWIAHGPHLVVTTYNSYAINGCHYHTKLHDKNKIVHNSGVS 120
             +  E++ G+ E + + L+WIAHGP   V  Y+ Y INGCHYHTK  D  +   NSGVS
Sbjct: 331 HTMKVEVSIGNEEPVFETLKWIAHGPSHYVFKYHGYVINGCHYHTKERDDLRATQNSGVS 390

Query: 121 LVSNAMQVCSSKDKNPIIGEMSFYGVIEEIWKLNYNTFK 149
           +V+  MQ+ S+KDKNP+ GE+ FYGVI EIW L+Y  F+
Sbjct: 391 VVATIMQIASAKDKNPVFGELCFYGVITEIWDLDYTMFR 429

[Close]
BLAST of CSPI07G02090 vs. TrEMBL
Match: A5BPQ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025604 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-25
Identity = 72/202 (35.64%), Postives = 99/202 (49.01%), Query Frame = 1 

Query: 1   MKVMKNAMRNRHRPEGCIAE-------------------------------ELGRPLSSG 60
           MKV+K  ++NR+  EGCI E                               ++G P+  G
Sbjct: 468 MKVLKGYVQNRNHLEGCIVECYIAEEAIEFCTEYLSNVDAIGVPSITNVDHKVGAPIPGG 527

Query: 61  VTNIPERELLHQAHRYVLENTVDVGTE-------LATGDVEISDNLRW------------ 120
                +  LL QAH YVLENT  +          L   +   S   +W            
Sbjct: 528 HITEVDSNLLLQAHHYVLENTTIIQPYIEEHMKWLKLNNPRQSKRQKWLQEENMRTFTHW 587

Query: 121 ----IAHGPHLVVTTYNSYAINGCHYHTKLHDKNKIVHNSGVSLVSNAMQVCSSKDKNPI 149
               IAHGP   ++ Y+ Y INGCHY+TK HD+ ++  NSGVS+V+  MQ+ S+KDKNP+
Sbjct: 588 LRKKIAHGPTHYMSKYHGYIINGCHYNTKDHDEVRVTQNSGVSIVATTMQISSAKDKNPV 647

[Close]
BLAST of CSPI07G02090 vs. NCBI nr
Match: gi|659133664|ref|XP_008466847.1| (PREDICTED: uncharacterized protein LOC103504152, partial [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 8.4e-46
Identity = 102/192 (53.12%), Postives = 121/192 (63.02%), Query Frame = 1 

Query: 1   MKVMKNAMRNRHRPEGCIAEE-----------------------------------LGRP 60
           MKV+KN +RNRHRPEGCIAE                                     GRP
Sbjct: 45  MKVLKNYVRNRHRPEGCIAESYIVEEAIEFCSDFLSGVDPVGLGIDRLDASLDNSSFGRP 104

Query: 61  LSSGVTNIPERELLHQAHRYVLENTVD----------VGTELATGDVEISDNLRWIAHGP 120
           LS+GV+   E++LL+QAHRYVL NT+D          V +E+   +VEISDNLRWIAH P
Sbjct: 105 LSAGVSFELEQDLLYQAHRYVLANTIDMQPYIDKHVEVASEIGMENVEISDNLRWIAHDP 164

Query: 121 HLVVTTYNSYAINGCHYHTKLHDKNKIVHNSGVSLVSNAMQVCSSKDKNPIIGEMSFYGV 148
           H  V  YNSY INGC YHT+ + KN+ V NS VSLV+  MQV SSKDKNPIIG+MSFYGV
Sbjct: 165 HPFVIKYNSYVINGCRYHTESYGKNRSVQNSEVSLVAKTMQVSSSKDKNPIIGDMSFYGV 224

[Close]
BLAST of CSPI07G02090 vs. NCBI nr
Match: gi|659098566|ref|XP_008450202.1| (PREDICTED: uncharacterized protein LOC103491863 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-42
Identity = 103/218 (47.25%), Postives = 123/218 (56.42%), Query Frame = 1 

Query: 1   MKVMKNAMRNRHRPEGCIAEE-----------------------------------LGRP 60
           MKV+KN +RNRHR EGCIAE                                     GRP
Sbjct: 30  MKVLKNYVRNRHRLEGCIAESYIVEEAIEFCSDFLSGVDPVGLGIDRLDTSLDNSSFGRP 89

Query: 61  LSSGVTNIPERELLHQAHRYVLENTVDV-------------------------------G 120
           LS+ V+   E++LL+QAHRYVL NT+DV                                
Sbjct: 90  LSAEVSFKLEQDLLYQAHRYVLANTIDVLQLKYPNKVLHQKWIQEEHIQTFISWLREEVA 149

Query: 121 TELATGDVEISDNLRWIAHGPHLVVTTYNSYAINGCHYHTKLHDKNKIVHNS-----GVS 148
           +E+   +VEISDNLRWIAH PH  V  YNSYAINGC YHT+ +DKN+ V NS     GVS
Sbjct: 150 SEIGMENVEISDNLRWIAHDPHPFVIKYNSYAINGCRYHTESYDKNRSVQNSGVQNNGVS 209

[Close]
BLAST of CSPI07G02090 vs. NCBI nr
Match: gi|659120983|ref|XP_008460446.1| (PREDICTED: uncharacterized protein LOC103499258 [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 5.5e-37
Identity = 81/179 (45.25%), Postives = 111/179 (62.01%), Query Frame = 1 

Query: 1   MKVMKNAMRNRHRPEGCIAE--------------------------------ELGRPLSS 60
           MKV+K+ +RNR+RPEGCIAE                                +  RPLS+
Sbjct: 1   MKVLKSFVRNRNRPEGCIAEAQVCEEAVHFCSGILSGLDKIGLGSLNSREEKQTDRPLSA 60

Query: 61  GVTNIPERELLHQAHRYVLENTVDVGTELATGDVEISDNLRWIAHGPHLVVTTYNSYAIN 120
           G    P+ + L QAH ++L+NT +V  EL  G V +S+ +RW+AHGP+  V TY  Y +N
Sbjct: 61  GTYVCPDMQQLKQAHLHILQNTEEVMCELHEGKV-VSNTIRWLAHGPNCSVMTYEGYMVN 120

Query: 121 GCHYHTKLHDKNKIVHNSGVSLVSNAMQVCSSKDKNPIIGEMSFYGVIEEIWKLNYNTF 148
           GC YHTK  D ++ V NSG+ LV+  MQV S+KDKNP+I +MSFYG+IE+IW+++YNTF
Sbjct: 121 GCSYHTKSRDDHRTVQNSGIMLVATIMQVSSAKDKNPVISDMSFYGIIEDIWEVSYNTF 178

[Close]
BLAST of CSPI07G02090 vs. NCBI nr
Match: gi|731389980|ref|XP_010650187.1| (PREDICTED: uncharacterized protein LOC100853148 [Vitis vinifera])

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30
Identity = 74/179 (41.34%), Postives = 102/179 (56.98%), Query Frame = 1 

Query: 1   MKVMKNAMRNRHRPEGCIAE-------------------------------ELGRPLSSG 60
           MKV+K  +RN +RPEGCIAE                               + G+PL  G
Sbjct: 644 MKVLKGYVRNHNRPEGCIAECYIAEEALEFCTEYLSGMDAIGIPSSMKDEWKCGKPLLGG 703

Query: 61  -VTNIPERELLHQAHRYVLENTVDVGTELATGDVEISDNLRWIAHGPHLVVTTYNSYAIN 120
               I + +L+ QAH YVL+NT  V  +++  +  I   L+W+A GP   V TY  Y I+
Sbjct: 704 RAITIHDYKLVEQAHHYVLQNTTIVSDDISKKE-PIEKELKWLAQGPRQQVLTYPGYIIH 763

Query: 121 GCHYHTKLHDKNKIVHNSGVSLVSNAMQVCSSKDKNPIIGEMSFYGVIEEIWKLNYNTF 148
           GC YH K  D+ ++  NSGVS+V++ MQ+ SSKDKNP++G+M FYG+I EIW L+YN F
Sbjct: 764 GCRYHIKNRDEARVNQNSGVSIVASTMQIASSKDKNPVLGDMCFYGIITEIWDLDYNMF 821

[Close]
BLAST of CSPI07G02090 vs. NCBI nr
Match: gi|147826604|emb|CAN61970.1| (hypothetical protein VITISV_003281 [Vitis vinifera])

HSP 1 Score: 136.3 bits (342), Expect = 4.2e-29
Identity = 79/193 (40.93%), Postives = 96/193 (49.74%), Query Frame = 1 

Query: 2   KVMKNAMRNRHRPEGCIAE-------------------------------ELGRPLSSG- 61
           K     + N +RPEGCIAE                               + GRP++ G 
Sbjct: 285 KAFNGYVHNHNRPEGCIAECYLAEXAIEFFTEYLSGTHAIGIPKSNNYDNKFGRPITGGR 344

Query: 62  VTNIPERELLHQAHRYVLENTVDVGT--------------ELATGDVEISDNLRWIAHGP 121
            TNI  +  L QAH YVLENT  V                E      +I + LRW+AHGP
Sbjct: 345 STNIDHKSWL-QAHHYVLENTTIVQPYIDFQLCFDYTXVEEAIHNXQDIPNTLRWLAHGP 404

Query: 122 HLVVTTYNSYAINGCHYHTKLHDKNKIVHNSGVSLVSNAMQVCSSKDKNPIIGEMSFYGV 149
              V  Y  Y INGC YHTK HD   +  NSGVS++   MQ+ SSKDKNP+ GE+ FYGV
Sbjct: 405 THQVVKYPGYIINGCXYHTKEHDMTCVTQNSGVSILVGTMQIASSKDKNPVFGELCFYGV 464

The following BLAST results are available for this feature:
BLAST of CSPI07G02090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G02090 vs. TrEMBL
Match NameE-valueIdentityDescription
A5C0H4_VITVI2.9e-2940.93Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_003281 P... [more]
A5C859_VITVI1.2e-2736.95Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036405 PE=4 SV=1[more]
A5AWJ4_VITVI6.1e-2741.67Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004106 PE=4 SV=1[more]
A5BUU3_VITVI8.0e-2744.03Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006717 PE=4 SV=1[more]
A5BPQ8_VITVI1.5e-2535.64Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025604 PE=4 SV=1[more]
BLAST of CSPI07G02090 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G02090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133664|ref|XP_008466847.1|8.4e-4653.13PREDICTED: uncharacterized protein LOC103504152, partial [Cucumis melo][more]
gi|659098566|ref|XP_008450202.1|2.5e-4247.25PREDICTED: uncharacterized protein LOC103491863 [Cucumis melo][more]
gi|659120983|ref|XP_008460446.1|5.5e-3745.25PREDICTED: uncharacterized protein LOC103499258 [Cucumis melo][more]
gi|731389980|ref|XP_010650187.1|1.3e-3041.34PREDICTED: uncharacterized protein LOC100853148 [Vitis vinifera][more]
gi|147826604|emb|CAN61970.1|4.2e-2940.93hypothetical protein VITISV_003281 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G02090.1CSPI07G02090.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10775UNCHARACTERIZEDcoord: 1..148
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G02090Cucumber (Chinese Long) v3cpicucB415
CSPI07G02090Cucumber (Chinese Long) v3cpicucB416
CSPI07G02090Watermelon (97103) v2cpiwmbB553
CSPI07G02090Wax gourdcpiwgoB681
CSPI07G02090Cucumber (Gy14) v1cgycpiB112
CSPI07G02090Cucurbita maxima (Rimu)cmacpiB044
CSPI07G02090Cucurbita maxima (Rimu)cmacpiB149
CSPI07G02090Cucurbita maxima (Rimu)cmacpiB533
CSPI07G02090Cucurbita moschata (Rifu)cmocpiB034
CSPI07G02090Cucurbita moschata (Rifu)cmocpiB131
CSPI07G02090Cucurbita moschata (Rifu)cmocpiB524
CSPI07G02090Cucumber (Chinese Long) v2cpicuB354
CSPI07G02090Cucumber (Chinese Long) v2cpicuB355
CSPI07G02090Cucurbita pepo (Zucchini)cpecpiB692
CSPI07G02090Cucumber (Gy14) v2cgybcpiB332
CSPI07G02090Cucumber (Gy14) v2cgybcpiB333
CSPI07G02090Silver-seed gourdcarcpiB0235
CSPI07G02090Silver-seed gourdcarcpiB1103