CSPI07G02040 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G02040
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Retrovirus-related Pol polyprotein from transposon 297 family
Location	Chr7 : 1730625 .. 1731795 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACTTTGCCCGGGCAAGAGTATAATATTTGGGGCATATTGTTCGAGAAAAGGAGTGAAAGTTGACCCGAAAAAAACTAGAACAATAAAGGAATGGCCAATACCGACAAATGTGCGGGAAGTGCGGGGATTTTTTGGTCTAATTGGTTATTATCGGTGATATGTTCAAGATTATGGTAACGTGGCTACCCCTTCGACTCAATTGTTGAAGGCAGGAGCTTACGAGTGGACGAAAGAGACTCAAGAAGCTTTTGAGAAATTAAAGAATGCTATGATGACATTGCCAGTGCTAGCATTACCTAATTTCAATTTGCCCTTCGAGATTGAAACTAATGCATCTGGCAATGGGATTGGAGTAGTGTTGATCCAAGTAACGAGGCCAATTGCTTATTTTAGTCACACTTTGTTCGTGAGGGATCGGCTAAACCGATTTATGAATGGGAGTTAATGGCAGTGGAGTTAGTTGTGCAACGGTGGAGACCGAAATGTTATGGAGGAAATTTGTGGTAAAAACTTATCAGCGATCTCTGAATTTTTGTTGGAACGAGTTATTCAACCTCAACATCAAAAATGGATCGCTAAGTTGTTAAGGTTATACGTCTGAGGTAATCTATAAACCGGGGTTGGAGAATAAGGTTGCTGATGCACTCTCTAGAATGACTTCAATGCATTTAAATCAATTAACGGCTCCTGCTTTGCTGGAATTGATCATAATTAAAGAAGAGCTGGAGAAGGGTCCATGGCTGAGTGAAATAATAGAAGAATTGAAGAAGAATGAGGAGTGTGTGGCTGACTTTTCTTTACAGCAGGGTGTGTTGAAGTAGAAAGGCAGAGTGGTGATTACTCGGCGTTATTACCCACTATATTACATACTTATCATGATTCTGTGTTTGGTGGACATTCAGGATTTTTTAGGACTTATAAACGGCTGAAGGGAGAGCTGTATTGGGAAGGTATGAAGGGTGATGTGAAGAAATATTGTGAGAAATGTGTCGTATGTCAGCATCCTAAGTCCTTGCCGTTGTCTCCAGCAGGATTATTGATGCCTTTAGAGATTCCGGATGCTGTATTGAGCCACATCTTTATGGATTTCATTGATGGGTTACCAAAGGCGGCTGGTTTCAATGTGATATTAGTAGCGGTGGACAGATTGAGTAAGTAGGCACATT

mRNA sequence

ATGCAACTTTGCCCGGGCAAGAGTATAATATTTGGGGCATATTGTTCGAGAAAAGGAGTGAAAGTTGACCCGAAAAAAACTAGAACAATAAAGGAATGGCCAATACCGACAAATGTGCGGGAAGCAGGAGCTTACGAGTGGACGAAAGAGACTCAAGAAGCTTTTGAGAAATTAAAGAATGCTATGATGACATTGCCAGTGCTAGCATTACCTAATTTCAATTTGCCCTTCGAGATTGAAACTAATGCATCTGGCAATGGGATTGGAGTAGTGTTGATCCAATCACACTTTGTTCGTGAGGGATCGGCTAAACCGATTTATGAATGGGAGTTAATGGCAGTGGAGTTAGTTGTGCAACGGTGGAGACCGAAATGTTATACGTCTGAGGTAATCTATAAACCGGGGTTGGAGAATAAGGTTGCTGATGCACTCTCTAGAATGACTTCAATGCATTTAAATCAATTAACGGCTCCTGCTTTGCTGGAATTGATCATAATTAAAGAAGAGCTGGAGAAGGGTCCATGGCTGAGTGAAATAATAGAAGAATTGAAGAAGAATGAGGAGTGTGTGGCTGACTTTTCTTTACAGCAGGGATTTTTTAGGACTTATAAACGGCTGAAGGGAGAGCTGTATTGGGAAGGTATGAAGGGTGATGTGAAGAAATATTGTGAGAAATGTGTCGTATGTCAGCATCCTAAGTCCTTGCCGTTGTCTCCAGCAGGATTATTGATGCCTTTAGAGATTCCGGATGCTGTATTGAGCCACATCTTTATGGATTTCATTGATGGGTTACCAAAGGCGGCTGGTTTCAATGTGATATTAGTAGCGGTGGACAGATTGAGTAAGTAG

Coding sequence (CDS)

ATGCAACTTTGCCCGGGCAAGAGTATAATATTTGGGGCATATTGTTCGAGAAAAGGAGTGAAAGTTGACCCGAAAAAAACTAGAACAATAAAGGAATGGCCAATACCGACAAATGTGCGGGAAGCAGGAGCTTACGAGTGGACGAAAGAGACTCAAGAAGCTTTTGAGAAATTAAAGAATGCTATGATGACATTGCCAGTGCTAGCATTACCTAATTTCAATTTGCCCTTCGAGATTGAAACTAATGCATCTGGCAATGGGATTGGAGTAGTGTTGATCCAATCACACTTTGTTCGTGAGGGATCGGCTAAACCGATTTATGAATGGGAGTTAATGGCAGTGGAGTTAGTTGTGCAACGGTGGAGACCGAAATGTTATACGTCTGAGGTAATCTATAAACCGGGGTTGGAGAATAAGGTTGCTGATGCACTCTCTAGAATGACTTCAATGCATTTAAATCAATTAACGGCTCCTGCTTTGCTGGAATTGATCATAATTAAAGAAGAGCTGGAGAAGGGTCCATGGCTGAGTGAAATAATAGAAGAATTGAAGAAGAATGAGGAGTGTGTGGCTGACTTTTCTTTACAGCAGGGATTTTTTAGGACTTATAAACGGCTGAAGGGAGAGCTGTATTGGGAAGGTATGAAGGGTGATGTGAAGAAATATTGTGAGAAATGTGTCGTATGTCAGCATCCTAAGTCCTTGCCGTTGTCTCCAGCAGGATTATTGATGCCTTTAGAGATTCCGGATGCTGTATTGAGCCACATCTTTATGGATTTCATTGATGGGTTACCAAAGGCGGCTGGTTTCAATGTGATATTAGTAGCGGTGGACAGATTGAGTAAGTAG

Homology

[Close]

BLAST of CSPI07G02040 vs. TrEMBL
Match: A0A151SMM7_CAJCA (Transposon Ty3-I Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_002261 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-44
Identity = 126/382 (32.98%), Postives = 167/382 (43.72%), Query Frame = 1


Query: 12  GAYCSRKGVKVDPKKTRTIKEWPIPTNVR-EAG--------------------------- 71
           G   S +GV+VDP K +++ EWP+P NV+ E G                           
Sbjct: 177 GHVISVQGVEVDPAKVKSVGEWPVPKNVKGERGFLGLTGYYRKFIRNYGKIAKPLTELTK 236

Query: 72  --AYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQSH----- 131
              + W +  Q+AFE+LK  + T P+LALPNF   FE+E +ASG GIG +L+Q       
Sbjct: 237 KEGFMWNERAQQAFEELKQKITTAPILALPNFEKEFELECDASGVGIGAILMQERMPVAF 296

Query: 132 ----FVREGSAKPIYEWELMAVELVVQRWRPKC--------------------------- 191
                     AK  YE ELMAV L +Q WRP                             
Sbjct: 297 FSKALSSRNLAKSAYEKELMAVALSIQHWRPYLMGCKFKVYSDQRSLKQLLQQRITNGSQ 356

Query: 192 ---------YTSEVIYKPGLENKVADALSRM--TSMHLNQLTAPALLELIIIKEELEKGP 251
                    Y  ++IYKPGLENK ADALSR          ++ P  L+   +  E+ K  
Sbjct: 357 QNLLAKLLGYNFKIIYKPGLENKGADALSRSFEEGELKTMVSMPIWLDCQNVVGEVHKDE 416

Query: 252 WLSEIIEELKKNEECVADFSLQ----------------------------------QGFF 283
               +I +L++  E    F+ Q                                   GF 
Sbjct: 417 KWKRVIADLQQAREAHPGFTYQHGILFFKNKMVIPAKSPWIPKLLDEFHSTPQGGHSGFL 476

[Close]

BLAST of CSPI07G02040 vs. TrEMBL
Match: A0A087FZ16_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs42979U000100 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.6e-38
Identity = 103/294 (35.03%), Postives = 151/294 (51.36%), Query Frame = 1


Query: 45  YEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQSH-------- 104
           ++W  E   AF+KLK AM T+PVLAL +F   F +E++ASG G+G VL+Q          
Sbjct: 690 FQWNAEATVAFQKLKEAMSTVPVLALVDFTEQFVVESDASGTGLGAVLMQQQRPLAYFSQ 749

Query: 105 ----------FVREGSAKPI-YEWELMAVELVVQRWRPKC--YTSEVIYKPGLENKVADA 164
                     FV     K + +  E   + +  Q+W  K   +  E+ YKPGLENK ADA
Sbjct: 750 ALTERQRLKKFVVRTDQKSLKFLLEQREINMEYQKWLTKLLGFDFEIHYKPGLENKAADA 809

Query: 165 LSRM-TSMHLNQLTAPALLELIIIKEELEKGPWLSEIIEELKKNEECVADFSLQQ----- 224
           LSR   ++ L  L+ PA ++L  I  E++K P L ++ EE+  +    ++FS+ Q     
Sbjct: 810 LSRRDMALQLCALSVPAAIQLEHINTEVDKDPVLHKLKEEVLLDAASHSEFSVVQGRLLR 869

Query: 225 -----------------------------GFFRTYKRLKGELYWEGMKGDVKKYCEKCVV 283
                                        G  +T KR++   YW+GM   ++++   C V
Sbjct: 870 KEKLVIPATSLLVDVILQEFHTGKLGGHGGVLKTQKRIEAVFYWKGMMSRIREFVAACQV 929

[Close]

BLAST of CSPI07G02040 vs. TrEMBL
Match: B5U9V7_LOTJA (Putative uncharacterized protein OS=Lotus japonicus PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37
Identity = 110/318 (34.59%), Postives = 149/318 (46.86%), Query Frame = 1


Query: 44   AYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQSH------- 103
            +++WT+E  +AF KLK  M T+PVL  PNF+ PF +ET+ASG G+G VL+Q         
Sbjct: 849  SFQWTEEATQAFVKLKEVMTTVPVLVPPNFDKPFILETDASGKGLGAVLMQEGRPVAYMS 908

Query: 104  --FVREGSAKPIYEWELMAVEL--------------VV--------------------QR 163
                    AK +YE ELMAV L              V+                    Q+
Sbjct: 909  KTLSDRAQAKSVYERELMAVVLAVQKWRHYLLGSQFVIHTDQRSLRFLADQRIMGEEQQK 968

Query: 164  WRPKC--YTSEVIYKPGLENKVADALSRMTSMHLNQLTAPALLELIIIKEELEKGPWLSE 223
            W  K   Y  E+ YKPG+ENK ADALSR   +  + +++    E   ++ E+       +
Sbjct: 969  WMSKLMGYDFEIKYKPGIENKAADALSR--KLQFSAISSVQCAEWADLEAEILGDERYRK 1028

Query: 224  IIEELKKNEECVADFSLQQ----------------------------------GFFRTYK 283
            +++EL         + L++                                  G FRTYK
Sbjct: 1029 VLQELATQGNSAIGYQLKRGRLLYKDRIVLPKGSTKILTVLKEFHDTALGGHAGIFRTYK 1088

[Close]

BLAST of CSPI07G02040 vs. TrEMBL
Match: B5U9W0_LOTJA (Putative uncharacterized protein OS=Lotus japonicus PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.6e-37
Identity = 109/318 (34.28%), Postives = 149/318 (46.86%), Query Frame = 1


Query: 44   AYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQSH------- 103
            +++WT+   +AF KLK  M T+PVL  PNF+ PF +ET+ASG G+G VL+Q         
Sbjct: 887  SFQWTEGATQAFVKLKEVMTTVPVLVPPNFDKPFILETDASGKGLGAVLMQEGRPVAYMS 946

Query: 104  --FVREGSAKPIYEWELMAVEL--------------VV--------------------QR 163
                    AK +YE ELMAV L              V+                    Q+
Sbjct: 947  KTLSDRAQAKSVYERELMAVVLAVQKWRHYLLGSKFVIHTDQRSLRFLADQRIMGEEQQK 1006

Query: 164  WRPKC--YTSEVIYKPGLENKVADALSRMTSMHLNQLTAPALLELIIIKEELEKGPWLSE 223
            W  K   Y  E+ YKPG+ENK ADALSR   +  + +++    E   ++ E+ +     +
Sbjct: 1007 WMSKLMGYDFEIKYKPGIENKAADALSR--KLQFSAISSVQCAEWADLEAEILEDERYRK 1066

Query: 224  IIEELKKNEECVADFSLQQ----------------------------------GFFRTYK 283
            +++EL         + L++                                  G FRTYK
Sbjct: 1067 VLQELATQGNSAVGYQLKRGRLLYKDRIVLPKGSTKILTVLKEFHDTALGGHAGIFRTYK 1126

[Close]

BLAST of CSPI07G02040 vs. TrEMBL
Match: B5U9W4_LOTJA (Putative uncharacterized protein OS=Lotus japonicus PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.6e-37
Identity = 109/318 (34.28%), Postives = 149/318 (46.86%), Query Frame = 1


Query: 44   AYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQSH------- 103
            +++WT+   +AF KLK  M T+PVL  PNF+ PF +ET+ASG G+G VL+Q         
Sbjct: 887  SFQWTEGATQAFVKLKEVMTTVPVLVPPNFDKPFILETDASGKGLGAVLMQEGRPVAYMS 946

Query: 104  --FVREGSAKPIYEWELMAVEL--------------VV--------------------QR 163
                    AK +YE ELMAV L              V+                    Q+
Sbjct: 947  KTLSDRAQAKSVYERELMAVVLAVQKWRHYLLGSKFVIHTDQRSLRFLADQRIMGEEQQK 1006

Query: 164  WRPKC--YTSEVIYKPGLENKVADALSRMTSMHLNQLTAPALLELIIIKEELEKGPWLSE 223
            W  K   Y  E+ YKPG+ENK ADALSR   +  + +++    E   ++ E+ +     +
Sbjct: 1007 WMSKLMGYDFEIKYKPGIENKAADALSR--KLQFSAISSVQCAEWADLEAEILEDERYRK 1066

Query: 224  IIEELKKNEECVADFSLQQ----------------------------------GFFRTYK 283
            +++EL         + L++                                  G FRTYK
Sbjct: 1067 VLQELATQGNSAVGYQLKRGRLLYKDRIVLPKGSTKILTVLKEFHDTALGGHAGIFRTYK 1126

[Close]

BLAST of CSPI07G02040 vs. NCBI nr
Match: gi|659113889|ref|XP_008456800.1| (PREDICTED: uncharacterized protein LOC103496640 [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 134/317 (42.27%), Postives = 175/317 (55.21%), Query Frame = 1


Query: 12  GAYCSRKGVKVDPKKTRTIKEWPIP-TNVREAGAYEWTKETQEAFEKLKNAMMTLPVLAL 71
           G   SR+GV+VDP K + I +WP   T + + G ++W +E +EAF KLK AM+TLPVLAL
Sbjct: 395 GHVISREGVEVDPDKIKAIADWPSHLTQLLKKGGFKWNEEAEEAFLKLKTAMLTLPVLAL 454

Query: 72  PNFNLPFEIETNASGNGIGVVLIQSHFV---------REGSAKPIYEWELMAVELVVQRW 131
           P+F+ PFEIET+ASG G+G +L+QS  +             A+P+Y              
Sbjct: 455 PSFDHPFEIETDASGYGVGAMLVQSKRLIAFYSHTSSMRDRARPVY-------------- 514

Query: 132 RPKCYTSEVIYKPGLENKVADALSRM-TSMHLNQLTAPALLELIIIKEELEKGPWLSEII 191
                  E++YKP LENK  DALSR    + L+ ++AP L++L IIK+E+EK     +I 
Sbjct: 515 -------ELVYKPSLENKAIDALSRKPPDIQLSVISAPYLVDLKIIKDEVEKDEKPQKIT 574

Query: 192 EELKKNEECV-ADFSLQQGFFRTYKRL--------------------------------- 251
             L  +     + FSL+ GF     RL                                 
Sbjct: 575 TALCADGGLQNSKFSLRNGFLHYKNRLVLSKTSSLIPSMLNIFNDSVVGGHSGFLRTYKR 634

Query: 252 -KGELYWEGMKGDVKKYCEKCVVCQHPKSLPLSPAGLLMPLEIPDAVLSHIFMDFIDGLP 283
              ELYWEGMK D+KK CE C++CQH KSL LSPAGLL+P EI   V S I MDFI+GLP
Sbjct: 635 VASELYWEGMKFDMKKRCEACLICQHNKSLALSPAGLLVPQEILHQVWSDISMDFINGLP 690

[Close]

BLAST of CSPI07G02040 vs. NCBI nr
Match: gi|1012344841|gb|KYP56033.1| (Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan])

HSP 1 Score: 188.0 bits (476), Expect = 2.3e-44
Identity = 126/382 (32.98%), Postives = 167/382 (43.72%), Query Frame = 1


Query: 12  GAYCSRKGVKVDPKKTRTIKEWPIPTNVR-EAG--------------------------- 71
           G   S +GV+VDP K +++ EWP+P NV+ E G                           
Sbjct: 177 GHVISVQGVEVDPAKVKSVGEWPVPKNVKGERGFLGLTGYYRKFIRNYGKIAKPLTELTK 236

Query: 72  --AYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQSH----- 131
              + W +  Q+AFE+LK  + T P+LALPNF   FE+E +ASG GIG +L+Q       
Sbjct: 237 KEGFMWNERAQQAFEELKQKITTAPILALPNFEKEFELECDASGVGIGAILMQERMPVAF 296

Query: 132 ----FVREGSAKPIYEWELMAVELVVQRWRPKC--------------------------- 191
                     AK  YE ELMAV L +Q WRP                             
Sbjct: 297 FSKALSSRNLAKSAYEKELMAVALSIQHWRPYLMGCKFKVYSDQRSLKQLLQQRITNGSQ 356

Query: 192 ---------YTSEVIYKPGLENKVADALSRM--TSMHLNQLTAPALLELIIIKEELEKGP 251
                    Y  ++IYKPGLENK ADALSR          ++ P  L+   +  E+ K  
Sbjct: 357 QNLLAKLLGYNFKIIYKPGLENKGADALSRSFEEGELKTMVSMPIWLDCQNVVGEVHKDE 416

Query: 252 WLSEIIEELKKNEECVADFSLQ----------------------------------QGFF 283
               +I +L++  E    F+ Q                                   GF 
Sbjct: 417 KWKRVIADLQQAREAHPGFTYQHGILFFKNKMVIPAKSPWIPKLLDEFHSTPQGGHSGFL 476

[Close]

BLAST of CSPI07G02040 vs. NCBI nr
Match: gi|778730254|ref|XP_011659739.1| (PREDICTED: uncharacterized protein LOC105436252 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 2.6e-43
Identity = 108/246 (43.90%), Postives = 151/246 (61.38%), Query Frame = 1


Query: 16  SRKGVKVDPKKTRTIKEWPIPTNVREA------------------------------GAY 75
           S KGV+VDP+K + IK+W  PTNVRE                               G++
Sbjct: 2   SGKGVEVDPEKIKAIKQWATPTNVREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKLGSF 61

Query: 76  EWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQ--------SH- 135
           +W +  QEAFEKL+ AM+TLP+LALP+FN PFE+ET+ASG G+G VL+Q        SH 
Sbjct: 62  KWNEGAQEAFEKLQRAMVTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHT 121

Query: 136 FVREGSAKPIYEWELMAVELV---VQRWRPKC--YTSEVIYKPGLENKVADALSRM-TSM 195
                 +KP+YE ELMAV ++    Q+W  K   Y+ EV+YKPGLENK ADALSR+  + 
Sbjct: 122 LALRDRSKPVYERELMAVRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTA 181

Query: 196 HLNQLTAPALLELIIIKEELEKGPWLSEIIEELKKNEECVADFSLQQGFFRTYKRLKGEL 217
           HLNQLTAP L+++ +I+EE++K  +L +II  +++ EE V +++LQQG  R   RL  ++
Sbjct: 182 HLNQLTAPTLVDIKVIREEVDKDDYLKDIINRIQREEE-VKNYTLQQGILRYKGRLDRDV 241

[Close]

BLAST of CSPI07G02040 vs. NCBI nr
Match: gi|1012128403|ref|XP_015964281.1| (PREDICTED: uncharacterized protein LOC107488099 [Arachis duranensis])

HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40
Identity = 121/385 (31.43%), Postives = 169/385 (43.90%), Query Frame = 1


Query: 12   GAYCSRKGVKVDPKKTRTIKEWPIPTNVR------------------------------E 71
            G   S +GV  DPKK R + +WP P ++R                              +
Sbjct: 975  GHVISAEGVAADPKKLRDMLDWPPPKDIRSLRGFLGLTGYYRRFVKGYGTIAAPLTQLLK 1034

Query: 72   AGAYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQS------ 131
              ++ W K+ + AF+KLK AM+++PVLA+P F+ PF++ET+ASG G+G VL+Q       
Sbjct: 1035 KDSFNWGKDAESAFQKLKTAMVSVPVLAVPCFSKPFQLETDASGKGVGAVLMQEGRPIAF 1094

Query: 132  ---HFVREGSAKPIYEWELMAVELVVQ--------------------------------- 191
                       K +YE ELMA+ L VQ                                 
Sbjct: 1095 MSQKLSETAQQKSVYERELMAIVLAVQKWKHYLMGQQFTVFTDQQSLKFLLDQRVADEGQ 1154

Query: 192  -RWRPKC--YTSEVIYKPGLENKVADALSRMTSMHLNQLTAP------------------ 251
             +W  K   Y  ++ YK G EN+VADALSR    H + L+                    
Sbjct: 1155 QKWLSKLLGYNFDIKYKAGTENRVADALSR--KFHFSSLSFSMAAEWDDMEAEVLADEKL 1214

Query: 252  -ALLELIIIKEELEKG--------------------PWLSEIIEELKKNEECVADFSLQQ 283
              +++ +++ EE   G                     W+ +I+ E   ++          
Sbjct: 1215 NGIMQKLLVGEETTPGFALMNGKLKYKGRLVLAKTSKWIPKILLEFHSSK-----LGGHS 1274

[Close]

BLAST of CSPI07G02040 vs. NCBI nr
Match: gi|923632147|ref|XP_013751020.1| (PREDICTED: uncharacterized protein LOC106453301 [Brassica napus])

HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39
Identity = 115/332 (34.64%), Postives = 163/332 (49.10%), Query Frame = 1


Query: 37   TNVREAGAYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVL---- 96
            T + +   + WT E  +AFE+LK AM +LPVL LP+F  PF +ET+ASG+GIG VL    
Sbjct: 1262 TELLKKDGFYWTVEATQAFEQLKGAMCSLPVLRLPDFRKPFVVETDASGSGIGAVLSQEG 1321

Query: 97   -----IQSHFVREGSAKPIYEWELMAVELVVQRW-------------------------- 156
                 I   F  +G  K +YE EL+A+   V +W                          
Sbjct: 1322 RPIAFISKGFSNKGRVKSVYERELLAIVFAVTKWRHYLTGRQFTIRTDQKSLRHLLEQRA 1381

Query: 157  ---RPKCYTSEVI-------YKPGLENKVADALSRMT-----SMHLN--QLTAPALLELI 216
                 + + S+++       Y+PG EN+VADALSR       S  L   QLTAP  +++ 
Sbjct: 1382 VSVEQQKWASKLLGLNFIIEYRPGKENRVADALSRCMDKKEESQELREFQLTAPLSIDMD 1441

Query: 217  IIKEELEKGPWLSEIIEELKKNEECVADFSLQQGFFRTYKRL------------------ 276
             +  ++EK   L +II  +++  +  ADF++ +G     +RL                  
Sbjct: 1442 ELAFQVEKDDMLQKIIRGIQQGNKDYADFTVDKGVLFKERRLVIPAKSRFIPTLLKQFHS 1501

Query: 277  ----------------KGELYWEGMKGDVKKYCEKCVVCQHPKSLPLSPAGLLMPLEIPD 283
                              E+YW+GMKGD+ ++ + C  CQ  K   LSPAGLL PL IP 
Sbjct: 1502 SAIGGHEGVLKTFKRMAREVYWQGMKGDITEFIKSCEECQKNKYSTLSPAGLLSPLPIPT 1561

The following BLAST results are available for this feature:

BLAST of CSPI07G02040 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G02040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A151SMM7_CAJCA	1.6e-44	32.98	Transposon Ty3-I Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_002261 PE=4 SV=1	[more]
A0A087FZ16_ARAAL	8.6e-38	35.03	Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs42979U000100 PE=4...	[more]
B5U9V7_LOTJA	2.5e-37	34.59	Putative uncharacterized protein OS=Lotus japonicus PE=4 SV=1	[more]
B5U9W0_LOTJA	5.6e-37	34.28	Putative uncharacterized protein OS=Lotus japonicus PE=4 SV=1	[more]
B5U9W4_LOTJA	5.6e-37	34.28	Putative uncharacterized protein OS=Lotus japonicus PE=4 SV=1	[more]

BLAST of CSPI07G02040 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI07G02040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113889\|ref\|XP_008456800.1\|	1.2e-51	42.27	PREDICTED: uncharacterized protein LOC103496640 [Cucumis melo]	[more]
gi\|1012344841\|gb\|KYP56033.1\|	2.3e-44	32.98	Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]	[more]
gi\|778730254\|ref\|XP_011659739.1\|	2.6e-43	43.90	PREDICTED: uncharacterized protein LOC105436252 [Cucumis sativus]	[more]
gi\|1012128403\|ref\|XP_015964281.1\|	1.2e-40	31.43	PREDICTED: uncharacterized protein LOC107488099 [Arachis duranensis]	[more]
gi\|923632147\|ref\|XP_013751020.1\|	1.3e-39	34.64	PREDICTED: uncharacterized protein LOC106453301 [Brassica napus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G02040.1	CSPI07G02040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 16..282 score: 5.0
None	No IPR available	PANTHER	PTHR24559:SF186	SUBFAMILY NOT NAMED	coord: 16..282 score: 5.0
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 10..132 score: 1.78

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G02040	Cucumber (Gy14) v1	cgycpiB112
CSPI07G02040	Cucurbita maxima (Rimu)	cmacpiB044
CSPI07G02040	Cucurbita maxima (Rimu)	cmacpiB149
CSPI07G02040	Cucurbita maxima (Rimu)	cmacpiB533
CSPI07G02040	Cucurbita moschata (Rifu)	cmocpiB034
CSPI07G02040	Cucurbita moschata (Rifu)	cmocpiB131
CSPI07G02040	Cucurbita moschata (Rifu)	cmocpiB524
CSPI07G02040	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G02040	Cucumber (Chinese Long) v2	cpicuB355
CSPI07G02040	Cucurbita pepo (Zucchini)	cpecpiB692
CSPI07G02040	Cucumber (Gy14) v2	cgybcpiB332
CSPI07G02040	Cucumber (Gy14) v2	cgybcpiB333
CSPI07G02040	Silver-seed gourd	carcpiB0235
CSPI07G02040	Silver-seed gourd	carcpiB1103
CSPI07G02040	Cucumber (Chinese Long) v3	cpicucB415
CSPI07G02040	Cucumber (Chinese Long) v3	cpicucB416
CSPI07G02040	Watermelon (97103) v2	cpiwmbB553
CSPI07G02040	Wax gourd	cpiwgoB681