CSPI07G02010 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGCAATCCTCGATGCCCAAGGAGTTTGGGAAGCAATAGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAGGACAAAAAGGTGTGTGTACATTCTCCAATGCATCCTGAAAGACGTGCTTCTACTGCTAAGAAGAAGATCGCAAAGGAAATATGGGATAGTCTCAAGACAAGTTACTTGGGCAGTGAGCGGGTGAAGATGGCGAGAGTTCAAACCTTGAAGCGTGAGTTTAATGTACTTCGGATGAAGGAAACCGAGATGATCGATGAGTTTGCAGGAAAAATCAGCGGATTAGCAAGCAAGTTCACCACCCTCGGAGTTGCACTTAAGGATTCATCATTGGTCAAGAAGCTCCTCGATTCCGTACCCGACAAATATCTTCCCATTGTCGCCGGAATTGAGCAATTTCAAGATCTCGAAACCATGCCATTTGAAGAAGCAATTGGACGGATGAAGGCATACGAGGAANNNNNNNNNNNNNNNNNNNNNNNNNCAACACCGATGGACAACTCCTACTTACCCATGCCGAATGGAAAGCTAGACAAAAAGGACATAGTGGTGACAACTCCTCAATGACCAAAGGGCGCGAATTTGGTGGTACCGATCGAGGAAGATGGCGAGGACGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGGCACTCGTGATAAAAGTCACATTAAGTGTTTCACTTGCAACAAGATGGGACATTACGCGTCGGAATGTCGTGGAAAAGGTCGTGACGAGGAAGCTCATCTAACTTGTGCCGTCGAAGAAGAACCAACTTTGATGGTGGCCATGTCCCAGGAGGGGACACGCACTATATGTGATCAGGAGGATGCCATACTACTCAGCAAAGAGCGGTTGTTGCCAGAGATGTATTGCAACGACAAGAATGGAGAAAATAATGATGTTTGGTATCTAGCACGGTGCTAGTAACGCTGGCCATCGTAAGAAGTTCCAAGAATTAGATGAAAGCTTCACTGGGAGGGGGAAGTTTGGCGATCAACCATTCAGATCATGGGAAAAGGAACAGTCATGTTCGAGTGCAAGAACGGTGATCAGAAGGCTCTCCAAGAGGTGTATCACATTCCAAAATTATGTAGTAACATCATAA ATGCCAATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGCAATCCTCGATGCCCAAGGAGTTTGGGAAGCAATAGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAGGACAAAAAGGTGTGTGTACATTCTCCAATGCATCCTGAAAGACGTGCTTCTACTGCTAAGAAGAAGATCGCAAAGGAAATATGGGATAGTCTCAAGACAAGTTACTTGGGCAGTGAGCGGGTGAAGATGGCGAGAGTTCAAACCTTGAAGCGTGAGTTTAATGTACTTCGGATGAAGGAAACCGAGATGATCGATGAGTTTGCAGGAAAAATCAGCGGATTAGCAAGCAAGTTCACCACCCTCGGAGTTGCACTTAAGGATTCATCATTGGTCAAGAAGCTCCTCGATTCCGGCGCGAATTTGGTGGTACCGATCGAGGAAGATGGCGAGGACATGGGACATTACGCGTCGGAATGTCGTGGAAAAGGTCGTGACGAGGAAGCTCATCTAACTTGTGCCGTCGAAGAAGAACCAACTTTGATGGTGGCCATGTCCCAGGAGGGGACACGCACTATATGTGATCAGGAGGATGCCATACTACTCAGCAAAGAGCGGTTGTTGCCAGAGATTAACGCTGGCCATCGTAAGAAGTTCCAAGAATTAGATGAAAGCTTCACTGGGAGGGGGAAGTTTGGCGATCAACCATTCAGATCATGGGAAAAGGAACAGTCATGTTCGAGTGCAAGAACGGTGATCAGAAGGCTCTCCAAGAGGTGTATCACATTCCAAAATTATGTAGTAACATCATAA ATGCCAATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGCAATCCTCGATGCCCAAGGAGTTTGGGAAGCAATAGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAGGACAAAAAGGTGTGTGTACATTCTCCAATGCATCCTGAAAGACGTGCTTCTACTGCTAAGAAGAAGATCGCAAAGGAAATATGGGATAGTCTCAAGACAAGTTACTTGGGCAGTGAGCGGGTGAAGATGGCGAGAGTTCAAACCTTGAAGCGTGAGTTTAATGTACTTCGGATGAAGGAAACCGAGATGATCGATGAGTTTGCAGGAAAAATCAGCGGATTAGCAAGCAAGTTCACCACCCTCGGAGTTGCACTTAAGGATTCATCATTGGTCAAGAAGCTCCTCGATTCCGGCGCGAATTTGGTGGTACCGATCGAGGAAGATGGCGAGGACATGGGACATTACGCGTCGGAATGTCGTGGAAAAGGTCGTGACGAGGAAGCTCATCTAACTTGTGCCGTCGAAGAAGAACCAACTTTGATGGTGGCCATGTCCCAGGAGGGGACACGCACTATATGTGATCAGGAGGATGCCATACTACTCAGCAAAGAGCGGTTGTTGCCAGAGATTAACGCTGGCCATCGTAAGAAGTTCCAAGAATTAGATGAAAGCTTCACTGGGAGGGGGAAGTTTGGCGATCAACCATTCAGATCATGGGAAAAGGAACAGTCATGTTCGAGTGCAAGAACGGTGATCAGAAGGCTCTCCAAGAGGTGTATCACATTCCAAAATTATGTAGTAACATCATAA
BLAST of CSPI07G02010 vs. TrEMBL
Match: Q2QUP7_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g15530 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.0e-36 Identity = 82/140 (58.57%), Postives = 101/140 (72.14%), Query Frame = 1
BLAST of CSPI07G02010 vs. TrEMBL
Match: Q0JH75_ORYSJ (Os01g0879800 protein OS=Oryza sativa subsp. japonica GN=Os01g0879800 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.0e-36 Identity = 82/140 (58.57%), Postives = 101/140 (72.14%), Query Frame = 1
BLAST of CSPI07G02010 vs. TrEMBL
Match: Q0IZT5_ORYSJ (Os09g0551200 protein OS=Oryza sativa subsp. japonica GN=Os09g0551200 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.0e-32 Identity = 80/140 (57.14%), Postives = 95/140 (67.86%), Query Frame = 1
BLAST of CSPI07G02010 vs. TrEMBL
Match: Q2QVG3_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g12910 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.0e-32 Identity = 80/140 (57.14%), Postives = 95/140 (67.86%), Query Frame = 1
BLAST of CSPI07G02010 vs. TrEMBL
Match: B6TVF1_MAIZE (Retrotransposon protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.2e-29 Identity = 70/151 (46.36%), Postives = 102/151 (67.55%), Query Frame = 1
BLAST of CSPI07G02010 vs. NCBI nr
Match: gi|778722274|ref|XP_011658449.1| (PREDICTED: uncharacterized protein LOC105436008 [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 2.8e-50 Identity = 112/144 (77.78%), Postives = 118/144 (81.94%), Query Frame = 1
BLAST of CSPI07G02010 vs. NCBI nr
Match: gi|77554492|gb|ABA97288.1| (retrotransposon protein, putative, Ty1-copia subclass, expressed [Oryza sativa Japonica Group]) HSP 1 Score: 159.5 bits (402), Expect = 8.6e-36 Identity = 82/140 (58.57%), Postives = 101/140 (72.14%), Query Frame = 1
BLAST of CSPI07G02010 vs. NCBI nr
Match: gi|113534520|dbj|BAF06903.1| (Os01g0879800 [Oryza sativa Japonica Group]) HSP 1 Score: 159.5 bits (402), Expect = 8.6e-36 Identity = 82/140 (58.57%), Postives = 101/140 (72.14%), Query Frame = 1
BLAST of CSPI07G02010 vs. NCBI nr
Match: gi|77553519|gb|ABA96315.1| (retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]) HSP 1 Score: 146.7 bits (369), Expect = 5.8e-32 Identity = 80/140 (57.14%), Postives = 95/140 (67.86%), Query Frame = 1
BLAST of CSPI07G02010 vs. NCBI nr
Match: gi|113632099|dbj|BAF25780.1| (Os09g0551200 [Oryza sativa Japonica Group]) HSP 1 Score: 146.7 bits (369), Expect = 5.8e-32 Identity = 80/140 (57.14%), Postives = 95/140 (67.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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