CSPI07G00340 (gene) Wild cucumber (PI 183967)

NameCSPI07G00340
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 396815 .. 397438 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGTAAGACTGGCAACGTTTCTTTTCCAGAAAGAAGCAAAATATTGGTGGAGATCAATTAAGGTTAAACAAGGAGATACTAATGATTAGGATTTAAATACTTTTATAGGTATTTTTGAAGATAAGTATTATCCAAGTACTTATCGGGAGATGAAGAGGGACAAATTTCTGCATTTGGAGCAGGAATCATTATCGGTAGCATATTATGGAGGGAAGTTTACAGAAATGTCAAGATATGTTGAAGTGTTAGTGGCAACCGAGATTGATCGTTGCTAGATGTTTGAAAGAGGTCTAAGGTAGGAAATCCTTACTCCTGTTACTTCAAGGACAAAGTGGACTGACTTCTCTGAGTTGGTTGAGACTACATTGCGAGTAGAGTAGAGCTTCTTGAAGGCAAGCCAACATTAGAATCAAGTCAAGGGATTTCATTAGTTAGTAATACCAAAGGACGGGAGCAACGACAATTTATTCCTGGTATATCAAGAAGAAGGGACTTTAAAACTCGATCGAGTGAAAAGACCTACAGGCAAGTTAGTGAAGGAAGTGTAGCCTTTCCAAGACAATCAAACAGAACAGGAACGATGTCTCAATCAAGACAGGAATCAAGAGCAAGTAACTGA

mRNA sequence

ATGAAAGATAAGTATTATCCAAGTACTTATCGGGAGATGAAGAGGGACAAATTTCTGCATTTGGAGCAGGAATCATTATCGGTAGCATATTATGGAGGGAAGTTTACAGAAATGTCAAGATATGTTGAAGTAGTAGAGCTTCTTGAAGGCAAGCCAACATTAGAATCAAGTCAAGGGATTTCATTAGTTAGTAATACCAAAGGACGGGAGCAACGACAATTTATTCCTGGTATATCAAGAAGAAGGGACTTTAAAACTCGATCGAGTGAAAAGACCTACAGGCAAGTTAGTGAAGGAAGTGTAGCCTTTCCAAGACAATCAAACAGAACAGGAACGATGTCTCAATCAAGACAGGAATCAAGAGCAAGTAACTGA

Coding sequence (CDS)

ATGAAAGATAAGTATTATCCAAGTACTTATCGGGAGATGAAGAGGGACAAATTTCTGCATTTGGAGCAGGAATCATTATCGGTAGCATATTATGGAGGGAAGTTTACAGAAATGTCAAGATATGTTGAAGTAGTAGAGCTTCTTGAAGGCAAGCCAACATTAGAATCAAGTCAAGGGATTTCATTAGTTAGTAATACCAAAGGACGGGAGCAACGACAATTTATTCCTGGTATATCAAGAAGAAGGGACTTTAAAACTCGATCGAGTGAAAAGACCTACAGGCAAGTTAGTGAAGGAAGTGTAGCCTTTCCAAGACAATCAAACAGAACAGGAACGATGTCTCAATCAAGACAGGAATCAAGAGCAAGTAACTGA
BLAST of CSPI07G00340 vs. TrEMBL
Match: A0A0A0LAU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G463190 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-15
Identity = 59/128 (46.09%), Postives = 75/128 (58.59%), Query Frame = 1

Query: 2   KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVV-------------ELL 61
           +DKYYPSTY E KRD FL L+Q SLSVA Y  K+TE+SRY +V+              + 
Sbjct: 3   EDKYYPSTYGEAKRDAFLDLKQGSLSVAEYERKYTELSRYTDVIVASEIETALRVEQSIT 62

Query: 62  EGKPTLESSQGISLVSNTKGREQRQFIP--GISRRRDFKTRSSEKTYRQVSEGSVAFPRQ 115
           E K  +E S+G S VS  +GREQ++F P   IS  +DFK R   +  R +S GSV F RQ
Sbjct: 63  EEKSAVELSRGASTVSGFRGREQQRFTPRVNISSSQDFKNRFGGQASRNMSYGSV-FQRQ 122

BLAST of CSPI07G00340 vs. TrEMBL
Match: A0A0A0KFN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G224010 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-10
Identity = 55/136 (40.44%), Postives = 72/136 (52.94%), Query Frame = 1

Query: 4   KYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVELLEGKPTLE-------- 63
           +YYP TY E  RD+FL L+Q S+SVA Y  K+TE+SRY  V+   E +            
Sbjct: 2   QYYPITYCEPTRDEFLGLKQGSISVAEYERKYTELSRYANVILASESERCQRFFSVSGDC 61

Query: 64  SSQGISLVSNTKGREQRQFIPGI--SRRRDFKTRSSEKTYRQVSEGSV------AFPRQS 123
            S G+        REQR+F PG+  S R+DFK RS  +  R +S GSV      + P QS
Sbjct: 62  HSCGVEYNIREISREQRRFTPGVKFSSRQDFKNRSRGQASRNMSYGSVFQSQSQSIPNQS 121

BLAST of CSPI07G00340 vs. NCBI nr
Match: gi|700202916|gb|KGN58049.1| (hypothetical protein Csa_3G463190 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-15
Identity = 59/128 (46.09%), Postives = 75/128 (58.59%), Query Frame = 1

Query: 2   KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVV-------------ELL 61
           +DKYYPSTY E KRD FL L+Q SLSVA Y  K+TE+SRY +V+              + 
Sbjct: 3   EDKYYPSTYGEAKRDAFLDLKQGSLSVAEYERKYTELSRYTDVIVASEIETALRVEQSIT 62

Query: 62  EGKPTLESSQGISLVSNTKGREQRQFIP--GISRRRDFKTRSSEKTYRQVSEGSVAFPRQ 115
           E K  +E S+G S VS  +GREQ++F P   IS  +DFK R   +  R +S GSV F RQ
Sbjct: 63  EEKSAVELSRGASTVSGFRGREQQRFTPRVNISSSQDFKNRFGGQASRNMSYGSV-FQRQ 122

BLAST of CSPI07G00340 vs. NCBI nr
Match: gi|700192033|gb|KGN47237.1| (hypothetical protein Csa_6G224010 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-10
Identity = 55/136 (40.44%), Postives = 72/136 (52.94%), Query Frame = 1

Query: 4   KYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVELLEGKPTLE-------- 63
           +YYP TY E  RD+FL L+Q S+SVA Y  K+TE+SRY  V+   E +            
Sbjct: 2   QYYPITYCEPTRDEFLGLKQGSISVAEYERKYTELSRYANVILASESERCQRFFSVSGDC 61

Query: 64  SSQGISLVSNTKGREQRQFIPGI--SRRRDFKTRSSEKTYRQVSEGSV------AFPRQS 123
            S G+        REQR+F PG+  S R+DFK RS  +  R +S GSV      + P QS
Sbjct: 62  HSCGVEYNIREISREQRRFTPGVKFSSRQDFKNRSRGQASRNMSYGSVFQSQSQSIPNQS 121

BLAST of CSPI07G00340 vs. NCBI nr
Match: gi|659112465|ref|XP_008456237.1| (PREDICTED: uncharacterized protein LOC103496240 [Cucumis melo])

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-09
Identity = 53/149 (35.57%), Postives = 71/149 (47.65%), Query Frame = 1

Query: 2   KDKYYPSTYREMKRDKFLHLEQESLSVAYYG----------------------------- 61
           ++KYYP+TY E KRD+FL L+Q S SVA Y                              
Sbjct: 72  EEKYYPTTYCEAKRDEFLELKQGSFSVAEYERKYTELSRYAEMIVASESDMCRRFERGLR 131

Query: 62  ----------GKFTEMSRYVEVV-----ELLEGKPTLESSQGISLVSNTKGREQRQFIPG 105
                      K+T  S+ VE        ++E K  +E S+G+S  S  +GREQR+F PG
Sbjct: 132 FEIRTLVTAIAKWTNFSQLVETALRVEQSIVEEKSAMELSRGVSTTSGIRGREQRRFTPG 191

BLAST of CSPI07G00340 vs. NCBI nr
Match: gi|659133542|ref|XP_008466780.1| (PREDICTED: uncharacterized protein LOC103504112 [Cucumis melo])

HSP 1 Score: 68.6 bits (166), Expect = 9.1e-09
Identity = 54/154 (35.06%), Postives = 73/154 (47.40%), Query Frame = 1

Query: 2   KDKYYPSTYREMKRDKFLHLEQESLSVAYY------------------------------ 61
           ++KYYP+TY E KRD+FL L+Q SL V  Y                              
Sbjct: 52  EEKYYPTTYCEAKRDEFLELKQGSLLVVEYEMKYTELSRYAEMIVASESDRCRRFERGLR 111

Query: 62  ---------GGKFTEMSRYVEVV-----ELLEGKPTLESSQGISLVSNTKGREQRQFIPG 110
                      K+T  S+ VE        ++E K  +E S+G+S  S  +GREQR+F PG
Sbjct: 112 FELRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSAMELSRGVSTTSGIRGREQRRFTPG 171

BLAST of CSPI07G00340 vs. NCBI nr
Match: gi|659118041|ref|XP_008458920.1| (PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-07
Identity = 49/145 (33.79%), Postives = 68/145 (46.90%), Query Frame = 1

Query: 2   KDKYYPSTYREMKRDKFLHLEQESLSVAYY------------------------------ 61
           ++KYYP+TY E KRD+FL L+Q SLS+A Y                              
Sbjct: 47  EEKYYPTTYCEAKRDEFLELKQGSLSMAEYERKYTELSRYAGMIMASESDRCHRFERGLR 106

Query: 62  ---------GGKFTEMSRYVEVV-----ELLEGKPTLESSQGISLVSNTKGREQRQFIPG 101
                      K+T  S+ VE        ++E K  +E S+G+S  S  +G EQR+F  G
Sbjct: 107 FEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSAMELSRGVSTTSGIRGPEQRRFTSG 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LAU6_CUCSA3.5e-1546.09Uncharacterized protein OS=Cucumis sativus GN=Csa_3G463190 PE=4 SV=1[more]
A0A0A0KFN3_CUCSA1.5e-1040.44Uncharacterized protein OS=Cucumis sativus GN=Csa_6G224010 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700202916|gb|KGN58049.1|5.0e-1546.09hypothetical protein Csa_3G463190 [Cucumis sativus][more]
gi|700192033|gb|KGN47237.1|2.2e-1040.44hypothetical protein Csa_6G224010 [Cucumis sativus][more]
gi|659112465|ref|XP_008456237.1|4.1e-0935.57PREDICTED: uncharacterized protein LOC103496240 [Cucumis melo][more]
gi|659133542|ref|XP_008466780.1|9.1e-0935.06PREDICTED: uncharacterized protein LOC103504112 [Cucumis melo][more]
gi|659118041|ref|XP_008458920.1|1.7e-0733.79PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G00340.1CSPI07G00340.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G00340CsaV3_7G000330Cucumber (Chinese Long) v3cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G00340Wild cucumber (PI 183967)cpicpiB089
CSPI07G00340Wild cucumber (PI 183967)cpicpiB092
CSPI07G00340Cucumber (Gy14) v1cgycpiB136
CSPI07G00340Cucumber (Gy14) v1cgycpiB249
CSPI07G00340Cucumber (Gy14) v1cgycpiB557
CSPI07G00340Cucurbita maxima (Rimu)cmacpiB150
CSPI07G00340Cucurbita maxima (Rimu)cmacpiB533
CSPI07G00340Cucurbita maxima (Rimu)cmacpiB580
CSPI07G00340Cucurbita maxima (Rimu)cmacpiB651
CSPI07G00340Cucurbita moschata (Rifu)cmocpiB138
CSPI07G00340Cucurbita moschata (Rifu)cmocpiB189
CSPI07G00340Cucurbita moschata (Rifu)cmocpiB524
CSPI07G00340Cucurbita moschata (Rifu)cmocpiB567
CSPI07G00340Cucurbita moschata (Rifu)cmocpiB644
CSPI07G00340Cucumber (Chinese Long) v2cpicuB328
CSPI07G00340Cucumber (Chinese Long) v2cpicuB329
CSPI07G00340Cucumber (Chinese Long) v2cpicuB354
CSPI07G00340Melon (DHL92) v3.5.1cpimeB518
CSPI07G00340Melon (DHL92) v3.5.1cpimeB539
CSPI07G00340Melon (DHL92) v3.5.1cpimeB556
CSPI07G00340Watermelon (Charleston Gray)cpiwcgB563
CSPI07G00340Watermelon (Charleston Gray)cpiwcgB575
CSPI07G00340Watermelon (Charleston Gray)cpiwcgB598
CSPI07G00340Watermelon (97103) v1cpiwmB595
CSPI07G00340Watermelon (97103) v1cpiwmB622
CSPI07G00340Watermelon (97103) v1cpiwmB628
CSPI07G00340Cucurbita pepo (Zucchini)cpecpiB124
CSPI07G00340Cucurbita pepo (Zucchini)cpecpiB259
CSPI07G00340Cucurbita pepo (Zucchini)cpecpiB300
CSPI07G00340Cucurbita pepo (Zucchini)cpecpiB698
CSPI07G00340Cucurbita pepo (Zucchini)cpecpiB769
CSPI07G00340Cucurbita pepo (Zucchini)cpecpiB850
CSPI07G00340Bottle gourd (USVL1VR-Ls)cpilsiB497
CSPI07G00340Bottle gourd (USVL1VR-Ls)cpilsiB506
CSPI07G00340Bottle gourd (USVL1VR-Ls)cpilsiB549
CSPI07G00340Melon (DHL92) v3.6.1cpimedB503
CSPI07G00340Melon (DHL92) v3.6.1cpimedB524
CSPI07G00340Melon (DHL92) v3.6.1cpimedB543
CSPI07G00340Cucumber (Gy14) v2cgybcpiB086
CSPI07G00340Cucumber (Gy14) v2cgybcpiB089
CSPI07G00340Cucumber (Gy14) v2cgybcpiB332
CSPI07G00340Silver-seed gourdcarcpiB0201
CSPI07G00340Silver-seed gourdcarcpiB0348
CSPI07G00340Silver-seed gourdcarcpiB1020
CSPI07G00340Cucumber (Chinese Long) v3cpicucB384
CSPI07G00340Cucumber (Chinese Long) v3cpicucB387
CSPI07G00340Watermelon (97103) v2cpiwmbB553
CSPI07G00340Watermelon (97103) v2cpiwmbB543
CSPI07G00340Watermelon (97103) v2cpiwmbB581
CSPI07G00340Wax gourdcpiwgoB679
CSPI07G00340Wax gourdcpiwgoB688
CSPI07G00340Wax gourdcpiwgoB693