CSPI07G00120 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGACATTAAGGAAGGAAGCTGCTCAAAAAAGGAAGACGACAACAACTACTGAAGACAGAGGCAAAAAAGCTTCATCTTATAGCTCCTCATCTGAGTTAGACAGCCCACGCAAATCTTACACAAAAGTGCTGACAAACAGTAGCTCATCAGACTCTGGCTCTCCTAAAATTCTTCCTTTTGGTAACATAAAAGAAGAGACTCCCACTGGGGCTTTTGACTCTCTCGACTGGACTAAAACAGTGGTGATCACTAGAAGATATTTTCATGACGACTGGAAGAAAATCATGGCGAAACTACAAGAACAGCTGGATCTCAACATCACTTACAAGCCCTTTCATGCAGAAAAGGTTGCAGTTACGATTGAAGATAAGAACTTAGTGAACCTCCTTTGTAAAAACAGAGGGTGGACTACGGTTGGAAAGTATTATGTCAAATTTGAGGCTTCGAACATTGCCAAACATGCTTCCCCAAAGTTTCTGCCAAGCTATGGTGGTTAGGTCAAATTCAAAGGTATTCCCCTTCATGCATGGAATTACTCGTGTTTTTATCAAATTGGAGAAGCATGTGGTGGGTTTGTTGAAGTCGTCAAAATTACCAAAGACAGACTCGATCTCTTTGAGGCAGATATCAAAATCAAATATAACTACTCGGGCTTCATTCCTGCCTTTGTTAGGATTCCCGATGAGGATGGAAATCAATTTACAATTCAGACTGTTGTACAAGCTGAAGGGAAATGGCTCAAAGAAAGAAATCCCAGAATTCATGGTACATTCACAAATGAAGCAGCAAAAAATTTCAATGAATTCAAAGAAGATTGTGAACAGTACCAGTTTATTGATAATATTGCAGTGCCGGCAAACTGGGCCTCACCGAAAAACATACAAGACGAAAGAAAAAAAAAACGCATCAGAATAGTGACCTGCAAAAAACCATAA ATGCTGACATTAAGGAAGGAAGCTGCTCAAAAAAGGAAGACGACAACAACTACTGAAGACAGAGGCAAAAAAGCTTCATCTTATAGCTCCTCATCTGAGTTAGACAGCCCACGCAAATCTTACACAAAAGTGCTGACAAACAGTAGCTCATCAGACTCTGGCTCTCCTAAAATTCTTCCTTTTGGTAACATAAAAGAAGAGACTCCCACTGGGGCTTTTGACTCTCTCGACTGGACTAAAACAGTGGTGATCACTAGAAGATATTTTCATGACGACTGGAAGAAAATCATGGCGAAACTACAAGAACAGCTGGATCTCAACATCACTTACAAGCCCTTTCATGCAGAAAAGGTTGCAGTTACGATTGAAGATAAGAACTTAGTGAACCTCCTTTGTAAAAACAGAGGGTGGACTACGGTTGGAAAGTATTATGTCAAATTTGAGGCTTCGAACATTGCCAAACATGCTTCCCCAAAGTTTCTGCCAAGCTATGGTGTCGTCAAAATTACCAAAGACAGACTCGATCTCTTTGAGGCAGATATCAAAATCAAATATAACTACTCGGGCTTCATTCCTGCCTTTGTTAGGATTCCCGATGAGGATGGAAATCAATTTACAATTCAGACTGTTGTACAAGCTGAAGGGAAATGGCTCAAAGAAAGAAATCCCAGAATTCATGGTACATTCACAAATGAAGCAGCAAAAAATTTCAATGAATTCAAAGAAGATTGTGAACAGTACCAGTTTATTGATAATATTGCAGTGCCGGCAAACTGGGCCTCACCGAAAAACATACAAGACGAAAGAAAAAAAAAACGCATCAGAATAGTGACCTGCAAAAAACCATAA ATGCTGACATTAAGGAAGGAAGCTGCTCAAAAAAGGAAGACGACAACAACTACTGAAGACAGAGGCAAAAAAGCTTCATCTTATAGCTCCTCATCTGAGTTAGACAGCCCACGCAAATCTTACACAAAAGTGCTGACAAACAGTAGCTCATCAGACTCTGGCTCTCCTAAAATTCTTCCTTTTGGTAACATAAAAGAAGAGACTCCCACTGGGGCTTTTGACTCTCTCGACTGGACTAAAACAGTGGTGATCACTAGAAGATATTTTCATGACGACTGGAAGAAAATCATGGCGAAACTACAAGAACAGCTGGATCTCAACATCACTTACAAGCCCTTTCATGCAGAAAAGGTTGCAGTTACGATTGAAGATAAGAACTTAGTGAACCTCCTTTGTAAAAACAGAGGGTGGACTACGGTTGGAAAGTATTATGTCAAATTTGAGGCTTCGAACATTGCCAAACATGCTTCCCCAAAGTTTCTGCCAAGCTATGGTGTCGTCAAAATTACCAAAGACAGACTCGATCTCTTTGAGGCAGATATCAAAATCAAATATAACTACTCGGGCTTCATTCCTGCCTTTGTTAGGATTCCCGATGAGGATGGAAATCAATTTACAATTCAGACTGTTGTACAAGCTGAAGGGAAATGGCTCAAAGAAAGAAATCCCAGAATTCATGGTACATTCACAAATGAAGCAGCAAAAAATTTCAATGAATTCAAAGAAGATTGTGAACAGTACCAGTTTATTGATAATATTGCAGTGCCGGCAAACTGGGCCTCACCGAAAAACATACAAGACGAAAGAAAAAAAAAACGCATCAGAATAGTGACCTGCAAAAAACCATAA
BLAST of CSPI07G00120 vs. TrEMBL
Match: A0A0A0K120_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G004025 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.7e-81 Identity = 159/165 (96.36%), Postives = 159/165 (96.36%), Query Frame = 1
BLAST of CSPI07G00120 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.9e-53 Identity = 107/224 (47.77%), Postives = 138/224 (61.61%), Query Frame = 1
BLAST of CSPI07G00120 vs. TrEMBL
Match: A0A0A0KNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G465580 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46 Identity = 112/195 (57.44%), Postives = 134/195 (68.72%), Query Frame = 1
BLAST of CSPI07G00120 vs. TrEMBL
Match: A0A0A0KFP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.4e-26 Identity = 61/150 (40.67%), Postives = 90/150 (60.00%), Query Frame = 1
BLAST of CSPI07G00120 vs. TrEMBL
Match: A0A0A0KF42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G482730 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13 Identity = 55/128 (42.97%), Postives = 72/128 (56.25%), Query Frame = 1
BLAST of CSPI07G00120 vs. NCBI nr
Match: gi|700187915|gb|KGN43148.1| (hypothetical protein Csa_7G004025 [Cucumis sativus]) HSP 1 Score: 310.8 bits (795), Expect = 2.4e-81 Identity = 159/165 (96.36%), Postives = 159/165 (96.36%), Query Frame = 1
BLAST of CSPI07G00120 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 217.6 bits (553), Expect = 2.7e-53 Identity = 107/224 (47.77%), Postives = 138/224 (61.61%), Query Frame = 1
BLAST of CSPI07G00120 vs. NCBI nr
Match: gi|700195958|gb|KGN51135.1| (hypothetical protein Csa_5G465580 [Cucumis sativus]) HSP 1 Score: 194.9 bits (494), Expect = 1.9e-46 Identity = 112/195 (57.44%), Postives = 134/195 (68.72%), Query Frame = 1
BLAST of CSPI07G00120 vs. NCBI nr
Match: gi|659071590|ref|XP_008460776.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis melo]) HSP 1 Score: 186.8 bits (473), Expect = 5.2e-44 Identity = 110/256 (42.97%), Postives = 144/256 (56.25%), Query Frame = 1
BLAST of CSPI07G00120 vs. NCBI nr
Match: gi|700192460|gb|KGN47664.1| (hypothetical protein Csa_6G367105 [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 4.9e-26 Identity = 61/150 (40.67%), Postives = 90/150 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |