CSPI07G00060 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G00060
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionGag-protease polyprotein
LocationChr7 : 123874 .. 124869 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGAGGTTCGCGGAGCTTATGATGGCTATAGCTCAGAACCAGCAGGCACCTGCAGTTCCACCTGCACCAGTTGTTCCGCCTTCACCTGTGGTTCCCCCTGTACCAGCAGCTCCACCTGCACCAGCAACCCCTCCTGCACAAGGATTGGCTGCACAACAGCCACAGATACTACCGAACCAGCTTTCTGCTAAGGTGAAACATTTGAGAGACTTTAGGAAATATGACCCTCAGACGTTTGAAGGGTCACTGGAGGATCCTACTAAAGCTGAGTTGTGGTTGTCCTCTGTGGAAACCATATTTAATTACATGAGATGTCCAGAGGAGCATAGGGTTCAGTGTGCTGCTTTTCTTCTGAGGGACATAGGTATTATTTGGTGGAGGACTACGATGCATATGTTAGGTGGAGATGTGAGACAGATCACTTGGGATCAGTTTAAAGACTGCTTCTATACCAAGTTTTTCTCGACTAACCTTAGAGACGCCAAAAGCCAGGAATTCTTGGAATTGAAGCAAGGACACATGACAGTTGAGGAGTATGACCAGGAGTTTGATATGCTGTCGCGCTTTGCCCCTGAACTTGTTGGTAATGAGCAGGCTAGAGCTGAGAGGTTTGTCAAAGGATTGACAGATGAGATTAGAGGCTTTGTGCGTGCACTAAAGCCCACTACCCAGGGTGAAGTGCTGCGTCTGACAGTGGATATGAGTATTGGGCAGGATGAAATTCAGGCAAGGAGTTCTGATAAGGGAACGTCGTCTGGTCAGAAGAGGAAAGCAGAGCAGAGAATTGTGGGAGTTCCTCAGAGGAACTTGAGATCAGGCGATCCTATTCGCAATTTCCAGCAGAGTTCTGGTGGGGCAGGAGACACTACTAGAGAGAAGCCACTATGCAATACGTGTGGGAAACGCCACCTGGGTCGTTGTTTGATGGGAACGAGAGTCTGTTATAAGTGCAAGCAAGAGGGCCACATGGCTGATCGATGTCATCACTAG

mRNA sequence

ATGGAGGAGAGGTTCGCGGAGCTTATGATGGCTATAGCTCAGAACCAGCAGGCACCTGCAGTTCCACCTGCACCAGTTGTTCCGCCTTCACCTGTGGTTCCCCCTGTACCAGCAGCTCCACCTGCACCAGCAACCCCTCCTGCACAAGGATTGGCTGCACAACAGCCACAGATACTACCGAACCAGCTTTCTGCTAAGGTGAAACATTTGAGAGACTTTAGGAAATATGACCCTCAGACGTTTGAAGGGTCACTGGAGGATCCTACTAAAGCTGAGTTGTGGTTGTCCTCTGTGGAAACCATATTTAATTACATGAGATGTCCAGAGGAGCATAGGGTTCAGTGTGCTGCTTTTCTTCTGAGGGACATAGGTATTATTTGGTGGAGGACTACGATGCATATGTTAGGTGGAGATGTGAGACAGATCACTTGGGATCAGTTTAAAGACTGCTTCTATACCAAGTTTTTCTCGACTAACCTTAGAGACGCCAAAAGCCAGGAATTCTTGGAATTGAAGCAAGGACACATGACAGTTGAGGAGTATGACCAGGAGTTTGATATGCTGTCGCGCTTTGCCCCTGAACTTGTTGGTAATGAGCAGGCTAGAGCTGAGAGGTTTGTCAAAGGATTGACAGATGAGATTAGAGGCTTTGTGCGTGCACTAAAGCCCACTACCCAGGGTGAAGTGCTGCGTCTGACAGTGGATATGAGTATTGGGCAGGATGAAATTCAGGCAAGGAGTTCTGATAAGGGAACGTCGTCTGGTCAGAAGAGGAAAGCAGAGCAGAGAATTGTGGGAGTTCCTCAGAGGAACTTGAGATCAGGCGATCCTATTCGCAATTTCCAGCAGAGTTCTGGTGGGGCAGGAGACACTACTAGAGAGAAGCCACTATGCAATACGTGTGGGAAACGCCACCTGGGTCGTTGTTTGATGGGAACGAGAGTCTGTTATAAGTGCAAGCAAGAGGGCCACATGGCTGATCGATGTCATCACTAG

Coding sequence (CDS)

ATGGAGGAGAGGTTCGCGGAGCTTATGATGGCTATAGCTCAGAACCAGCAGGCACCTGCAGTTCCACCTGCACCAGTTGTTCCGCCTTCACCTGTGGTTCCCCCTGTACCAGCAGCTCCACCTGCACCAGCAACCCCTCCTGCACAAGGATTGGCTGCACAACAGCCACAGATACTACCGAACCAGCTTTCTGCTAAGGTGAAACATTTGAGAGACTTTAGGAAATATGACCCTCAGACGTTTGAAGGGTCACTGGAGGATCCTACTAAAGCTGAGTTGTGGTTGTCCTCTGTGGAAACCATATTTAATTACATGAGATGTCCAGAGGAGCATAGGGTTCAGTGTGCTGCTTTTCTTCTGAGGGACATAGGTATTATTTGGTGGAGGACTACGATGCATATGTTAGGTGGAGATGTGAGACAGATCACTTGGGATCAGTTTAAAGACTGCTTCTATACCAAGTTTTTCTCGACTAACCTTAGAGACGCCAAAAGCCAGGAATTCTTGGAATTGAAGCAAGGACACATGACAGTTGAGGAGTATGACCAGGAGTTTGATATGCTGTCGCGCTTTGCCCCTGAACTTGTTGGTAATGAGCAGGCTAGAGCTGAGAGGTTTGTCAAAGGATTGACAGATGAGATTAGAGGCTTTGTGCGTGCACTAAAGCCCACTACCCAGGGTGAAGTGCTGCGTCTGACAGTGGATATGAGTATTGGGCAGGATGAAATTCAGGCAAGGAGTTCTGATAAGGGAACGTCGTCTGGTCAGAAGAGGAAAGCAGAGCAGAGAATTGTGGGAGTTCCTCAGAGGAACTTGAGATCAGGCGATCCTATTCGCAATTTCCAGCAGAGTTCTGGTGGGGCAGGAGACACTACTAGAGAGAAGCCACTATGCAATACGTGTGGGAAACGCCACCTGGGTCGTTGTTTGATGGGAACGAGAGTCTGTTATAAGTGCAAGCAAGAGGGCCACATGGCTGATCGATGTCATCACTAG
Homology
[Close]
BLAST of CSPI07G00060 vs. TrEMBL
Match: Q84KB1_CUCME (Gag-protease polyprotein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 5.6e-105
Identity = 190/329 (57.75%), Postives = 240/329 (72.95%), Query Frame = 1 

Query: 1   MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILP 60
           ME+RF +++M + + Q+  +  PAP   P+P   P PA  P P  P          Q +P
Sbjct: 1   MEQRFRDMIMQMPEQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAP----------QFVP 60

Query: 61  NQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVETIFNYMRCPEEHRVQCAAFLL 120
           +QLSA+ KHLRDFRKY+P TF+GSLEDPT+A++WLSS+ETIF YM+CPE+ +VQCA F+L
Sbjct: 61  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFML 120

Query: 121 RDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEE 180
            D G  WW TT  MLGGDV QITW QFK+ FY KFFS +LRDAK QEFL L+QG MTVE+
Sbjct: 121 TDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQ 180

Query: 181 YDQEFDMLSRFAPELVGNEQARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQ 240
           YD EFDMLSRFAPE++  E ARA++FV+GL  +I+G VRA +P T  + LRL VD+S+ +
Sbjct: 181 YDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE 240

Query: 241 DEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT 300
               ++++ +G++SGQKRKAEQ+ V VPQRN R G   R+FQQ    AG+  R KPLC T
Sbjct: 241 RANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTT 300

Query: 301 CGKRHLGRCLMGTRVCYKCKQEGHMADRC 330
           CGK HLGRCL GTR C+KC+QEGH ADRC
Sbjct: 301 CGKHHLGRCLFGTRTCFKCRQEGHTADRC 319

[Close]
BLAST of CSPI07G00060 vs. TrEMBL
Match: E5GBB7_CUCME (Gag protease polyprotein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 8.1e-104
Identity = 195/329 (59.27%), Postives = 243/329 (73.86%), Query Frame = 1 

Query: 1   MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILP 60
           ME+RF +++M + + QQ PA P      P+P   PVPA  PAP  P A       PQ +P
Sbjct: 277 MEQRFRDMIMQMRE-QQKPASPT-----PAPAPAPVPAPAPAPV-PVA-------PQFVP 336

Query: 61  NQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVETIFNYMRCPEEHRVQCAAFLL 120
           +QLSA+ KHLRDFRKY+P TF+GSLEDPT+A++WLSS+ETIF YM+CPE+ +VQCA F+L
Sbjct: 337 DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFML 396

Query: 121 RDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEE 180
            D G  WW TT  MLGGDV QITW QFK+ FY KFFS +LRDAK QEFL L+QG MTVE+
Sbjct: 397 TDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQ 456

Query: 181 YDQEFDMLSRFAPELVGNEQARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQ 240
           YD EFDMLSRFAPE++  E ARA++FV+GL  +I+G VRA +P T  + LRL VD+S+ +
Sbjct: 457 YDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE 516

Query: 241 DEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT 300
               ++++ +G++SGQKRKAEQ+ V VPQRN R G   R+FQQ    AG+  R KPLC T
Sbjct: 517 RANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTT 576

Query: 301 CGKRHLGRCLMGTRVCYKCKQEGHMADRC 330
           CGK HLGRCL GTR C+KC+QEGH ADRC
Sbjct: 577 CGKHHLGRCLFGTRTCFKCRQEGHTADRC 591

[Close]
BLAST of CSPI07G00060 vs. TrEMBL
Match: E5GB72_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.5e-69
Identity = 133/218 (61.01%), Postives = 162/218 (74.31%), Query Frame = 1 

Query: 48  AQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVETIFNYMRC 107
           AQG  AQQ   LP+QLS + KHLRDFR YDPQTF GSLEDP   +LWLSSVETIF +MRC
Sbjct: 64  AQGQTAQQD--LPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMRC 123

Query: 108 PEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQE 167
           P++ +VQCA FLLR+   IWW++   MLGG+V QITWDQFK+ FY KF  ++LRDAK QE
Sbjct: 124 PDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQE 183

Query: 168 FLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQARAERFVKGLTDEIRGFVRALKPTTQG 227
           F+ LKQG MTVEEYD EFDMLS FAPELV  E ARA+ FV GL  +++GFVRA KP TQ 
Sbjct: 184 FINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQT 243

Query: 228 EVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIV 266
           E L L +D+S+ +D+   + S KG   GQKR+  + ++
Sbjct: 244 EALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLL 279

[Close]
BLAST of CSPI07G00060 vs. TrEMBL
Match: B0F820_CUCME (Putative uncharacterized protein OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.3e-32
Identity = 69/109 (63.30%), Postives = 82/109 (75.23%), Query Frame = 1 

Query: 124 GIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQ 183
           G  WW T   MLGGDV QITW QFK+ FY KFFST+LRDAK QEFL L+Q  MTVE+YD 
Sbjct: 97  GTAWWETIERMLGGDVGQITWQQFKESFYAKFFSTSLRDAKRQEFLNLEQDDMTVEQYDA 156

Query: 184 EFDMLSRFAPELVGNEQARAERFVKGLTDEIRGFVRALKPTTQGEVLRL 233
           EFDMLSRFAPE++  E ARA++FV+GL  +I+  VRA +P T  + LRL
Sbjct: 157 EFDMLSRFAPEMIAAEAARADKFVRGLRLDIQCLVRAFRPATHADALRL 205

[Close]
BLAST of CSPI07G00060 vs. TrEMBL
Match: W1NRU2_AMBTC (Uncharacterized protein (Fragment) OS=Amborella trichopoda GN=AMTR_s00876p00007370 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 88/259 (33.98%), Postives = 118/259 (45.56%), Query Frame = 1 

Query: 73  FRKYDPQTFEGSLEDPTKAELWLSSVETIFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTM 132
           FRK  P  FEG   DP +AE WL +VE I  YMR      V CAA LL+    IWW    
Sbjct: 108 FRKQHPPNFEGG-SDPMEAEEWLRTVEGIVEYMRLGNGDSVACAASLLKKDARIWWDVIK 167

Query: 133 HMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFA 192
                DV  +TW  F   F  K++S  +R A+  EF  L+QG  TV EY ++FD L++FA
Sbjct: 168 QTR--DVAAMTWADFVQVFNKKYYSEAIRSARVNEFTNLRQGKSTVTEYARQFDRLAKFA 227

Query: 193 PELVGNEQARAERFVKGLTDEIRGFV--RALKPTTQGEVLRLTVDMSIGQDEIQARSSDK 252
            +LV  E  R  RF +GL   I   +    ++ TT  E           +D      + K
Sbjct: 228 TDLVPTEFLRIHRFTEGLDSRISRDIAMSGVRATTYAE-----------KDNTARWEARK 287

Query: 253 GTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNTCGKRHLGRCL 312
            ++ G   K +     +P       D       ++        E PLC TCG++H G C 
Sbjct: 288 ASNGGGDNKRK-----LPSNQHNEADKRNKIGSNNYKGKKPYVEYPLCPTCGRKHPGECR 347

Query: 313 MGTRVCYKCKQEGHMADRC 330
           +  + CYKC Q GH    C
Sbjct: 348 LKGKTCYKCGQPGHYKKDC 347

[Close]
BLAST of CSPI07G00060 vs. NCBI nr
Match: gi|778697618|ref|XP_011654360.1| (PREDICTED: uncharacterized protein LOC105435363 [Cucumis sativus])

HSP 1 Score: 400.2 bits (1027), Expect = 3.5e-108
Identity = 202/237 (85.23%), Postives = 211/237 (89.03%), Query Frame = 1 

Query: 1   MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILP 60
           ME+RF ELM AIAQNQQAPAVPPAP+VPP            APA PPAQGLAAQQPQILP
Sbjct: 1   MEQRFTELMTAIAQNQQAPAVPPAPMVPP------------APAAPPAQGLAAQQPQILP 60

Query: 61  NQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVETIFNYMRCPEEHRVQCAAFLL 120
           NQLSA+ KHLR+ RKYDPQTF+GSLEDPTKAELWLSS+ETIFNYMRCPEEHRVQC AFLL
Sbjct: 61  NQLSAEAKHLRNLRKYDPQTFDGSLEDPTKAELWLSSMETIFNYMRCPEEHRVQCVAFLL 120

Query: 121 RDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEE 180
           RD GIIWWRTTM MLGGDVRQITWDQFK+CFYTKFFS NLRDAKSQEFLELKQG+MTVEE
Sbjct: 121 RDRGIIWWRTTMRMLGGDVRQITWDQFKNCFYTKFFSANLRDAKSQEFLELKQGYMTVEE 180

Query: 181 YDQEFDMLSRFAPELVGNEQARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMS 238
           YDQEFDMLSRFAPELV NEQARA+RFVKGL DEIRGFVRALKPTTQ E LRL VDMS
Sbjct: 181 YDQEFDMLSRFAPELVSNEQARADRFVKGLRDEIRGFVRALKPTTQAEALRLAVDMS 225

[Close]
BLAST of CSPI07G00060 vs. NCBI nr
Match: gi|28558780|gb|AAO45751.1| (gag-protease polyprotein [Cucumis melo subsp. melo])

HSP 1 Score: 389.0 bits (998), Expect = 8.1e-105
Identity = 190/329 (57.75%), Postives = 240/329 (72.95%), Query Frame = 1 

Query: 1   MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILP 60
           ME+RF +++M + + Q+  +  PAP   P+P   P PA  P P  P          Q +P
Sbjct: 1   MEQRFRDMIMQMPEQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAP----------QFVP 60

Query: 61  NQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVETIFNYMRCPEEHRVQCAAFLL 120
           +QLSA+ KHLRDFRKY+P TF+GSLEDPT+A++WLSS+ETIF YM+CPE+ +VQCA F+L
Sbjct: 61  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFML 120

Query: 121 RDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEE 180
            D G  WW TT  MLGGDV QITW QFK+ FY KFFS +LRDAK QEFL L+QG MTVE+
Sbjct: 121 TDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQ 180

Query: 181 YDQEFDMLSRFAPELVGNEQARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQ 240
           YD EFDMLSRFAPE++  E ARA++FV+GL  +I+G VRA +P T  + LRL VD+S+ +
Sbjct: 181 YDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE 240

Query: 241 DEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT 300
               ++++ +G++SGQKRKAEQ+ V VPQRN R G   R+FQQ    AG+  R KPLC T
Sbjct: 241 RANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTT 300

Query: 301 CGKRHLGRCLMGTRVCYKCKQEGHMADRC 330
           CGK HLGRCL GTR C+KC+QEGH ADRC
Sbjct: 301 CGKHHLGRCLFGTRTCFKCRQEGHTADRC 319

[Close]
BLAST of CSPI07G00060 vs. NCBI nr
Match: gi|307135903|gb|ADN33767.1| (gag protease polyprotein [Cucumis melo subsp. melo])

HSP 1 Score: 385.2 bits (988), Expect = 1.2e-103
Identity = 195/329 (59.27%), Postives = 243/329 (73.86%), Query Frame = 1 

Query: 1   MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILP 60
           ME+RF +++M + + QQ PA P      P+P   PVPA  PAP  P A       PQ +P
Sbjct: 277 MEQRFRDMIMQMRE-QQKPASPT-----PAPAPAPVPAPAPAPV-PVA-------PQFVP 336

Query: 61  NQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVETIFNYMRCPEEHRVQCAAFLL 120
           +QLSA+ KHLRDFRKY+P TF+GSLEDPT+A++WLSS+ETIF YM+CPE+ +VQCA F+L
Sbjct: 337 DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFML 396

Query: 121 RDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEE 180
            D G  WW TT  MLGGDV QITW QFK+ FY KFFS +LRDAK QEFL L+QG MTVE+
Sbjct: 397 TDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQ 456

Query: 181 YDQEFDMLSRFAPELVGNEQARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQ 240
           YD EFDMLSRFAPE++  E ARA++FV+GL  +I+G VRA +P T  + LRL VD+S+ +
Sbjct: 457 YDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE 516

Query: 241 DEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT 300
               ++++ +G++SGQKRKAEQ+ V VPQRN R G   R+FQQ    AG+  R KPLC T
Sbjct: 517 RANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTT 576

Query: 301 CGKRHLGRCLMGTRVCYKCKQEGHMADRC 330
           CGK HLGRCL GTR C+KC+QEGH ADRC
Sbjct: 577 CGKHHLGRCLFGTRTCFKCRQEGHTADRC 591

[Close]
BLAST of CSPI07G00060 vs. NCBI nr
Match: gi|778730299|ref|XP_004153845.2| (PREDICTED: uncharacterized protein LOC101217708 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 3.8e-102
Identity = 186/212 (87.74%), Postives = 197/212 (92.92%), Query Frame = 1 

Query: 51  LAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVETIFNYMRCPEE 110
           LAAQQPQILPNQLSA+ KHLRDFRKYDPQTF+GSLEDPTKAELWLSSVETIFNYMRCPEE
Sbjct: 9   LAAQQPQILPNQLSAEAKHLRDFRKYDPQTFDGSLEDPTKAELWLSSVETIFNYMRCPEE 68

Query: 111 HRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLE 170
           HRVQCAAFLLRD GIIWWRT M MLGGDVRQITWDQFKDCFYTKFFS NLR+AKS EFLE
Sbjct: 69  HRVQCAAFLLRDRGIIWWRTIMLMLGGDVRQITWDQFKDCFYTKFFSANLRNAKSHEFLE 128

Query: 171 LKQGHMTVEEYDQEFDMLSRFAPELVGNEQARAERFVKGLTDEIRGFVRALKPTTQGEVL 230
           LKQGHMTVEEYDQEF+MLS FAP+LVGNEQARAERFVKGL DEIRGFVRALKPTTQ E L
Sbjct: 129 LKQGHMTVEEYDQEFNMLSLFAPKLVGNEQARAERFVKGLRDEIRGFVRALKPTTQAEAL 188

Query: 231 RLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQ 263
            L VDMSIG+D+++ +S DK TSSGQK+KAEQ
Sbjct: 189 CLAVDMSIGKDKVRVKSFDKETSSGQKKKAEQ 220

[Close]
BLAST of CSPI07G00060 vs. NCBI nr
Match: gi|778701533|ref|XP_011655042.1| (PREDICTED: uncharacterized protein LOC101209878 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 9.6e-74
Identity = 143/227 (63.00%), Postives = 170/227 (74.89%), Query Frame = 1 

Query: 47  PAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVETIFNYMR 106
           P+QG AA  PQ LPNQLSA+ KHLRDFR YDPQTF G  EDP    LWLSSVE IF+YM+
Sbjct: 71  PSQGQAA--PQDLPNQLSAEAKHLRDFRIYDPQTFNGLSEDPINVMLWLSSVERIFHYMK 130

Query: 107 CPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQ 166
           CP+  +VQCA FLLR+   IWW +   MLGG+V Q TWDQFK+ FY KFF  +LRD K Q
Sbjct: 131 CPDNQKVQCAVFLLRERAAIWWLSVERMLGGNVNQFTWDQFKESFYAKFFPASLRDDKRQ 190

Query: 167 EFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQARAERFVKGLTDEIRGFVRALKPTTQ 226
           EF++LKQG MT+EEYD EFD+LS FAPELV  E ARA+RFV GL +++RGFVRALKP TQ
Sbjct: 191 EFIDLKQGQMTLEEYDYEFDILSLFAPELVETEAARAQRFVWGLKNDLRGFVRALKPATQ 250

Query: 227 GEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLR 274
            E LR+ +D+S  +D+   + S  G SSGQKRKAEQ+ + V  RNLR
Sbjct: 251 TEALRIAMDLSAHKDDDPPKVSRNGPSSGQKRKAEQKPIDVSWRNLR 295

The following BLAST results are available for this feature:
BLAST of CSPI07G00060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G00060 vs. TrEMBL
Match NameE-valueIdentityDescription
Q84KB1_CUCME5.6e-10557.75Gag-protease polyprotein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GBB7_CUCME8.1e-10459.27Gag protease polyprotein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GB72_CUCME6.5e-6961.01Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
B0F820_CUCME8.3e-3263.30Putative uncharacterized protein OS=Cucumis melo PE=4 SV=1[more]
W1NRU2_AMBTC1.3e-2933.98Uncharacterized protein (Fragment) OS=Amborella trichopoda GN=AMTR_s00876p000073... [more]
BLAST of CSPI07G00060 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G00060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778697618|ref|XP_011654360.1|3.5e-10885.23PREDICTED: uncharacterized protein LOC105435363 [Cucumis sativus][more]
gi|28558780|gb|AAO45751.1|8.1e-10557.75gag-protease polyprotein [Cucumis melo subsp. melo][more]
gi|307135903|gb|ADN33767.1|1.2e-10359.27gag protease polyprotein [Cucumis melo subsp. melo][more]
gi|778730299|ref|XP_004153845.2|3.8e-10287.74PREDICTED: uncharacterized protein LOC101217708 [Cucumis sativus][more]
gi|778701533|ref|XP_011655042.1|9.6e-7463.00PREDICTED: uncharacterized protein LOC101209878 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR005162Retrotrans_gag_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G00060.1CSPI07G00060.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 316..329
score: 9
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 117..212
score: 2.1
NoneNo IPR availablePANTHERPTHR10178GAG/POL/ENV POLYPROTEINcoord: 316..329
score: 9.7E-22coord: 2..203
score: 9.7
NoneNo IPR availablePANTHERPTHR10178:SF309SUBFAMILY NOT NAMEDcoord: 2..203
score: 9.7E-22coord: 316..329
score: 9.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G00060Cucurbita pepo (Zucchini)cpecpiB259
CSPI07G00060Cucurbita pepo (Zucchini)cpecpiB300
CSPI07G00060Cucurbita pepo (Zucchini)cpecpiB698
CSPI07G00060Cucurbita pepo (Zucchini)cpecpiB769
CSPI07G00060Cucurbita pepo (Zucchini)cpecpiB850
CSPI07G00060Bottle gourd (USVL1VR-Ls)cpilsiB497
CSPI07G00060Bottle gourd (USVL1VR-Ls)cpilsiB506
CSPI07G00060Melon (DHL92) v3.6.1cpimedB503
CSPI07G00060Melon (DHL92) v3.6.1cpimedB524
CSPI07G00060Cucumber (Gy14) v2cgybcpiB086
CSPI07G00060Cucumber (Gy14) v2cgybcpiB332
CSPI07G00060Silver-seed gourdcarcpiB0201
CSPI07G00060Silver-seed gourdcarcpiB0348
CSPI07G00060Silver-seed gourdcarcpiB1020
CSPI07G00060Cucumber (Chinese Long) v3cpicucB384
CSPI07G00060Cucumber (Chinese Long) v3cpicucB415
CSPI07G00060Watermelon (97103) v2cpiwmbB553
CSPI07G00060Watermelon (97103) v2cpiwmbB543
CSPI07G00060Wax gourdcpiwgoB679
CSPI07G00060Wax gourdcpiwgoB693
CSPI07G00060Wild cucumber (PI 183967)cpicpiB089
CSPI07G00060Cucumber (Gy14) v1cgycpiB136
CSPI07G00060Cucumber (Gy14) v1cgycpiB557
CSPI07G00060Cucurbita maxima (Rimu)cmacpiB150
CSPI07G00060Cucurbita maxima (Rimu)cmacpiB580
CSPI07G00060Cucurbita maxima (Rimu)cmacpiB651
CSPI07G00060Cucurbita moschata (Rifu)cmocpiB138
CSPI07G00060Cucurbita moschata (Rifu)cmocpiB524
CSPI07G00060Cucurbita moschata (Rifu)cmocpiB567
CSPI07G00060Cucurbita moschata (Rifu)cmocpiB644
CSPI07G00060Cucumber (Chinese Long) v2cpicuB354
CSPI07G00060Melon (DHL92) v3.5.1cpimeB518
CSPI07G00060Melon (DHL92) v3.5.1cpimeB539
CSPI07G00060Watermelon (Charleston Gray)cpiwcgB563
CSPI07G00060Watermelon (Charleston Gray)cpiwcgB575
CSPI07G00060Watermelon (97103) v1cpiwmB622
CSPI07G00060Watermelon (97103) v1cpiwmB628